Run inferCNV on neuroblastoma samples #1148
Description
If you are filing this issue based on a specific GitHub Discussion, please link to the relevant Discussion.
Part of #1143
Describe the goals of the changes to the analysis module.
This issue tracks getting our first set of inferCNV results on NB samples from SCPCP000004. To do this, we'll need to add a step in the SCPCP000004-specific workflow script to run inferCNV across samples.
What will your pull request contain?
The PR will have updates to the project-specific workflow script to run inferCNV over the relevant samples & conditions
Will you require additional software beyond what is already in the analysis module?
No
Will you require different computational resources beyond what the analysis module already uses?
No
If known, when do you expect to file the pull request?
Next sprint