From f7b28ac6f465a7bba0f43457a48a8b2a3a9555e8 Mon Sep 17 00:00:00 2001 From: "Matthew A. Wyczalkowski" Date: Tue, 1 Dec 2020 14:07:57 -0600 Subject: [PATCH] Discovery batch discover.20201119 * Discovery ran 11/27/20 * Incorporating new aliquot annotation from GDC * Work dir: mammoth:/home/mwyczalk_test/Projects/CPTAC3/discovery/discover.20201119 --- CPTAC3.Catalog.Summary.dat | 30 +- CPTAC3.Catalog.dat | 994 +++++++++++++++++++------------------ 2 files changed, 527 insertions(+), 497 deletions(-) diff --git a/CPTAC3.Catalog.Summary.dat b/CPTAC3.Catalog.Summary.dat index e4eb20a..dff56da 100644 --- a/CPTAC3.Catalog.Summary.dat +++ b/CPTAC3.Catalog.Summary.dat @@ -380,7 +380,7 @@ C3L-01035 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-01036 PDA WGS.hg19 T N A WXS.hg19 TT N A RNA.fq TT miRNA.fq T WGS.hg38 T N A WXS.hg38 TT N A RNA.hg38 TTT miRNA.hg38 T MethArray TT AA C3L-01037 PDA WGS.hg19 T N WXS.hg19 T N A RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT miRNA.hg38 T MethArray TT AA C3L-01038 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-01039 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3L-01039 PDA WGS.hg19 WXS.hg19 RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-01040 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-01042 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-01043 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT @@ -1053,7 +1053,7 @@ C3L-02884 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-02885 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-02886 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-02887 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-02888 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3L-02888 PDA WGS.hg19 WXS.hg19 RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-02889 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-02890 PDA WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-02891 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA @@ -1069,7 +1069,7 @@ C3L-02952 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-02953 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-02954 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-02955 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT -C3L-02956 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3L-02956 PDA WGS.hg19 WXS.hg19 RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-02957 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-02958 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-02959 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1153,7 +1153,7 @@ C3L-03288 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-03308 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03309 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03347 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-03348 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3L-03348 PDA WGS.hg19 WXS.hg19 RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03349 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03350 PDA WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-03351 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1257,14 +1257,14 @@ C3L-03595 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-03596 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03597 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03621 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-03622 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3L-03622 PDA WGS.hg19 WXS.hg19 RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03623 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03624 PDA WGS.hg19 TT N WXS.hg19 TT N RNA.fq miRNA.fq WGS.hg38 TT N WXS.hg38 TT N RNA.hg38 miRNA.hg38 MethArray TTTT C3L-03625 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03626 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03627 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03628 PDA WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT -C3L-03629 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3L-03629 PDA WGS.hg19 WXS.hg19 RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03630 PDA WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-03631 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03632 PDA WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT @@ -2436,7 +2436,7 @@ C3N-01381 PDA WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq C3N-01382 PDA WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 TT N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-01383 PDA WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 TT N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-01384 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-01385 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3N-01385 PDA WGS.hg19 WXS.hg19 RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-01386 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-01387 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-01388 PDA WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 TT N WXS.hg38 TT N RNA.hg38 TTT miRNA.hg38 T MethArray TT @@ -2634,8 +2634,8 @@ C3N-01894 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-01895 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-01896 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-01897 PDA WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 TT N WXS.hg38 TT N RNA.hg38 TTT miRNA.hg38 T MethArray TTTT -C3N-01898 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-01899 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3N-01898 PDA WGS.hg19 WXS.hg19 RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3N-01899 PDA WGS.hg19 WXS.hg19 RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-01900 PDA WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-01901 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-01902 CCRCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT @@ -2914,7 +2914,7 @@ C3N-02590 PDA WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq C3N-02591 PDA WGS.hg19 TT N WXS.hg19 TT N RNA.fq miRNA.fq WGS.hg38 TT N WXS.hg38 TT N RNA.hg38 miRNA.hg38 MethArray TTTT C3N-02592 PDA WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02593 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-02594 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3N-02594 PDA WGS.hg19 WXS.hg19 RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02595 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02596 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02597 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -2954,7 +2954,7 @@ C3N-02692 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-02693 HNSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02694 HNSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02695 HNSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT -C3N-02696 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3N-02696 PDA WGS.hg19 WXS.hg19 RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02697 PDA WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02698 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02699 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -2982,7 +2982,7 @@ C3N-02730 HNSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq C3N-02751 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02752 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02753 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-02754 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3N-02754 PDA WGS.hg19 WXS.hg19 RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02755 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02757 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-02758 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA @@ -2990,7 +2990,7 @@ C3N-02759 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-02761 CCRCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02763 CCRCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02764 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3N-02765 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3N-02765 PDA WGS.hg19 WXS.hg19 RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02767 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02768 PDA WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-02769 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT @@ -3046,7 +3046,7 @@ C3N-02926 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA. C3N-02927 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02928 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-02929 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3N-02930 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3N-02930 PDA WGS.hg19 WXS.hg19 RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02931 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02932 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02933 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -3081,7 +3081,7 @@ C3N-02992 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-02993 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02994 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02995 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-02996 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3N-02996 PDA WGS.hg19 WXS.hg19 RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02997 PDA WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 TT N WXS.hg38 TT N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02998 PDA WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02999 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray diff --git a/CPTAC3.Catalog.dat b/CPTAC3.Catalog.dat index 5a7290d..ac53cd5 100644 --- a/CPTAC3.Catalog.dat +++ b/CPTAC3.Catalog.dat @@ -1287,8 +1287,8 @@ C3L-00349.WXS.T C3L-00349 GBM WXS tumor CPT0000490007 CPT0000490007.WholeExome.R C3L-00349.WXS.T.hg38 C3L-00349 GBM WXS tumor CPT0000490007 4f397f83-cb82-420f-b319-12a156ff2d7f_gdc_realn.bam 37527877656 BAM NA 13c76db2-38ae-4382-a84f-c05912f0513e dc4c633aebba3588dbfbadc8322b0334 hg38 Primary Tumor C3L-00349-02 C3L-00356.MethArray.Green.T C3L-00356 UCEC Methylation Array tumor CPT0002130009 202178770100_R01C01_Grn.idat 13676231 IDAT Green 01f9e9ac-db9c-4837-90ba-75355af366a7 f2afb3a50b1b8ef9fe91e7110e61ddc7 NA Primary Tumor C3L-00356-01 C3L-00356.MethArray.Red.T C3L-00356 UCEC Methylation Array tumor CPT0002130009 202178770100_R01C01_Red.idat 13676231 IDAT Red 4837df20-40a4-4d73-8c5c-2a14cd71cb0a d304a18a6fe94182844258a201119f83 NA Primary Tumor C3L-00356-01 -C3L-00356.miRNA-Seq.T C3L-00356 UCEC miRNA-Seq tumor CPT0002130006 181012_UNC32-K00270_0124_AH223CBBXY_CCAACA_S9_L005_R1_001.unaln.bam 264043402 BAM NA fad45b6a-e837-4a4c-b65b-c65f366664bd 45b4263029dcfe885305ddcc6d3b33a0 NA Primary Tumor C3L-00356-01 -C3L-00356.miRNA-Seq.T.hg38 C3L-00356 UCEC miRNA-Seq tumor CPT0002130006 65b95ebc-7fc3-4a49-b8e8-930e68ad8710_mirnaseq_gdc_realn.bam 294391082 BAM NA f2ee8c90-1600-4fb8-99c8-d0b531bd94a2 694f6e0ede723c5f93aa108710eec8d3 hg38 Primary Tumor C3L-00356-01 +C3L-00356.miRNA-Seq.T.ARNA_oWRvA C3L-00356 UCEC miRNA-Seq tumor CPT0002130006 181012_UNC32-K00270_0124_AH223CBBXY_CCAACA_S9_L005_R1_001.unaln.bam 264043402 BAM NA fad45b6a-e837-4a4c-b65b-c65f366664bd 45b4263029dcfe885305ddcc6d3b33a0 NA Primary Tumor C3L-00356-01 additional_RNA ARNA_oWRvA Duplicate item: Additional RNA requested +C3L-00356.miRNA-Seq.T.ARNA_oWRvA.hg38 C3L-00356 UCEC miRNA-Seq tumor CPT0002130006 65b95ebc-7fc3-4a49-b8e8-930e68ad8710_mirnaseq_gdc_realn.bam 294391082 BAM NA f2ee8c90-1600-4fb8-99c8-d0b531bd94a2 694f6e0ede723c5f93aa108710eec8d3 hg38 Primary Tumor C3L-00356-01 additional_RNA ARNA_oWRvA Duplicate item: Additional RNA requested C3L-00356.RNA-Seq.chimeric.T.hg38 C3L-00356 UCEC RNA-Seq tumor CPT0002130013 775aee00-3893-4c82-b28c-f939e9e68b74.rna_seq.chimeric.gdc_realn.bam 104654670 BAM chimeric f1386c4c-5777-480e-90ec-05620de97fa2 19868119c7705f0553d3dae8438ab826 hg38 Primary Tumor C3L-00356-01 C3L-00356.RNA-Seq.genomic.T.hg38 C3L-00356 UCEC RNA-Seq tumor CPT0002130013 775aee00-3893-4c82-b28c-f939e9e68b74.rna_seq.genomic.gdc_realn.bam 13580606506 BAM genomic 81eb058f-ba86-4c0b-b708-8790c9e19fed 5f381f36dbe3b5a14627b7e9b6e089ec hg38 Primary Tumor C3L-00356-01 C3L-00356.RNA-Seq.R1.T C3L-00356 UCEC RNA-Seq tumor CPT0002130013 171011_UNC31-K00269_0086_AHLJLCBBXX_CGATGT_S11_L004_R1_001.fastq.gz 5604511930 FASTQ NA 4b2a33c2-3d9a-405c-9d10-049bed615f1d 09115960c3f3635f2ee6960cfa86f8b8 NA Primary Tumor C3L-00356-01 @@ -1559,8 +1559,8 @@ C3L-00412.MethArray.Red.A C3L-00412 LUAD Methylation Array tissue_normal CPT0023 C3L-00412.MethArray.Red.T C3L-00412 LUAD Methylation Array tumor CPT0023310006 202176290087_R01C01_Red.idat 13676216 IDAT Red a1dbac11-c6c8-486a-8953-c5daa0b62b9d 60e71e6d0dd9690188ec6f216e34af31 NA Primary Tumor C3L-00412-01 C3L-00412.miRNA-Seq.A C3L-00412 LUAD miRNA-Seq tissue_normal CPT0023320006 181108_UNC31-K00269_0163_BH23TVBBXY_CATTTT_S35_L002_R1_001.unaln.bam 198746146 BAM NA ac2678f3-1e47-46c8-88f6-c9f8bff35e31 84051983a708c0cf997f2fb8592a9eb8 NA Solid Tissue Normal C3L-00412-06 C3L-00412.miRNA-Seq.A.hg38 C3L-00412 LUAD miRNA-Seq tissue_normal CPT0023320006 70098b82-d1c1-4d35-b466-cc950280cf8c_mirnaseq_gdc_realn.bam 224130132 BAM NA 68645745-d20f-4983-b31a-520b29f74d49 d40746da015ec06b0ad086e1e048c6aa hg38 Solid Tissue Normal C3L-00412-06 -C3L-00412.miRNA-Seq.T C3L-00412 LUAD miRNA-Seq tumor CPT0023310009 181012_UNC32-K00270_0124_AH223CBBXY_GTTTCG_S41_L005_R1_001.unaln.bam 168290432 BAM NA a8c5512f-637b-4fb8-8bb7-8ea4bd2b73dd b13c22cda213191b56251aa340ac5ba3 NA Primary Tumor C3L-00412-01 -C3L-00412.miRNA-Seq.T.hg38 C3L-00412 LUAD miRNA-Seq tumor CPT0023310009 b6613d1e-1322-4a1c-a67e-5c9eb8d025e6_mirnaseq_gdc_realn.bam 188286665 BAM NA 8a00598b-3751-4b47-abbd-702bb7c36c13 08500db6876506c11422e00c3995468b hg38 Primary Tumor C3L-00412-01 +C3L-00412.miRNA-Seq.T.ARNA_rmExXK C3L-00412 LUAD miRNA-Seq tumor CPT0023310009 181012_UNC32-K00270_0124_AH223CBBXY_GTTTCG_S41_L005_R1_001.unaln.bam 168290432 BAM NA a8c5512f-637b-4fb8-8bb7-8ea4bd2b73dd b13c22cda213191b56251aa340ac5ba3 NA Primary Tumor C3L-00412-01 additional_RNA ARNA_rmExXK Duplicate item: Additional RNA requested +C3L-00412.miRNA-Seq.T.ARNA_rmExXK.hg38 C3L-00412 LUAD miRNA-Seq tumor CPT0023310009 b6613d1e-1322-4a1c-a67e-5c9eb8d025e6_mirnaseq_gdc_realn.bam 188286665 BAM NA 8a00598b-3751-4b47-abbd-702bb7c36c13 08500db6876506c11422e00c3995468b hg38 Primary Tumor C3L-00412-01 additional_RNA ARNA_rmExXK Duplicate item: Additional RNA requested C3L-00412.RNA-Seq.chimeric.A.hg38 C3L-00412 LUAD RNA-Seq tissue_normal CPT0023320006 42224e0c-8ade-4097-83f0-0f513ddfe25d.rna_seq.chimeric.gdc_realn.bam 34045129 BAM chimeric 4f80a123-2e4f-49bd-93cd-2b68916027fa 31fd942f187ad17970fa94055eb0ea08 hg38 Solid Tissue Normal C3L-00412-06 C3L-00412.RNA-Seq.chimeric.T.hg38 C3L-00412 LUAD RNA-Seq tumor CPT0023310013 89011940-02a6-43c2-a9bf-c03e0f263125.rna_seq.chimeric.gdc_realn.bam 74406156 BAM chimeric 94ef9619-0604-4660-b5ee-3b550c770421 9eb5ce38d0dd10b1b0105fdd8aac8994 hg38 Primary Tumor C3L-00412-01 C3L-00412.RNA-Seq.genomic.A.hg38 C3L-00412 LUAD RNA-Seq tissue_normal CPT0023320006 42224e0c-8ade-4097-83f0-0f513ddfe25d.rna_seq.genomic.gdc_realn.bam 6069061893 BAM genomic 6dfdb237-35b2-4d55-9beb-8b3a762d112e 6ae92e5ba1264c6c2ea7f0ced1b8be99 hg38 Solid Tissue Normal C3L-00412-06 @@ -2015,12 +2015,12 @@ C3L-00457.RNA-Seq.genomic.Tbm.hg38 C3L-00457 AML RNA-Seq tumor_bone_marrow CPT00 C3L-00457.RNA-Seq.R1.Tbm C3L-00457 AML RNA-Seq tumor_bone_marrow CPT0054830002 171129_UNC32-K00270_0066_AHM25VBBXX_ATCACG_S5_L002_R1_001.fastq.gz 5237946882 FASTQ NA 7fbb57ea-ce5f-460f-926c-bcd3c497d48e a33def0b3a04518a9c29bfa98ba43292 NA Primary Blood Derived Cancer - Bone Marrow C3L-00457-33,C3L-00457-56 C3L-00457.RNA-Seq.R2.Tbm C3L-00457 AML RNA-Seq tumor_bone_marrow CPT0054830002 171129_UNC32-K00270_0066_AHM25VBBXX_ATCACG_S5_L002_R2_001.fastq.gz 5266271358 FASTQ NA c2c12512-899d-403d-8eee-2bb9b031489b 7d0266cc7ee64672f0a6e36841e7aaa7 NA Primary Blood Derived Cancer - Bone Marrow C3L-00457-33,C3L-00457-56 C3L-00457.RNA-Seq.transcriptome.Tbm.hg38 C3L-00457 AML RNA-Seq tumor_bone_marrow CPT0054830002 bce9b61d-29ae-412b-aed2-b7d56e861bb1.rna_seq.transcriptome.gdc_realn.bam 12648983141 BAM transcriptome d519a498-47d6-4c52-b07c-5f69f318653e 4064e15c40fe85930e4a70b5459f65e9 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-00457-33,C3L-00457-56 -C3L-00457.WGS.Nbc C3L-00457 AML WGS buccal_normal CPT0054870005 CPT0054870005.WholeGenome.RP-1303.bam 69698611334 BAM NA a0f47869-5aa2-4da5-9de2-acab2d008fc8 f21e42febb1f7c1d4e38b14300683fae hg19 Buccal Cell Normal C3L-00457-51,C3L-00457-52 -C3L-00457.WGS.Nbc.hg38 C3L-00457 AML WGS buccal_normal CPT0054870005 4cfbc7ba-aeed-40f9-bd9e-cb7bdc0f1eea_wgs_gdc_realn.bam 102810790174 BAM NA 4786fe3f-0a54-4f8d-9a37-30116422748d b864745f49c32720ce91774a048ea93c hg38 Buccal Cell Normal C3L-00457-51,C3L-00457-52 +C3L-00457.WGS.Nbc.ADNA_n6qRDW C3L-00457 AML WGS buccal_normal CPT0054870005 CPT0054870005.WholeGenome.RP-1303.bam 69698611334 BAM NA a0f47869-5aa2-4da5-9de2-acab2d008fc8 f21e42febb1f7c1d4e38b14300683fae hg19 Buccal Cell Normal C3L-00457-51,C3L-00457-52 additional_DNA ADNA_n6qRDW Duplicate item: Additional DNA requested +C3L-00457.WGS.Nbc.ADNA_n6qRDW.hg38 C3L-00457 AML WGS buccal_normal CPT0054870005 4cfbc7ba-aeed-40f9-bd9e-cb7bdc0f1eea_wgs_gdc_realn.bam 102810790174 BAM NA 4786fe3f-0a54-4f8d-9a37-30116422748d b864745f49c32720ce91774a048ea93c hg38 Buccal Cell Normal C3L-00457-51,C3L-00457-52 additional_DNA ADNA_n6qRDW Duplicate item: Additional DNA requested C3L-00457.WGS.Tbm C3L-00457 AML WGS tumor_bone_marrow CPT0054850002 CPT0054850002.WholeGenome.RP-1303.bam 56262061965 BAM NA 86f2966f-8004-4a17-a5c8-acbba5e47bd7 67ce2d33cbc3af62d8c6439564023da8 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-00457-33,C3L-00457-54 C3L-00457.WGS.Tbm.hg38 C3L-00457 AML WGS tumor_bone_marrow CPT0054850002 6a3c7519-742a-4459-9abb-5c9a43c8d3f8_wgs_gdc_realn.bam 82332121109 BAM NA 34d5947e-1b54-49b7-a505-93fe5511f669 671b6e89cb2d352ea4947cb831476c54 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-00457-33,C3L-00457-54 -C3L-00457.WXS.Nbc C3L-00457 AML WXS buccal_normal CPT0054870005 CPT0054870005.WholeExome.RP-1303.bam 27023691727 BAM NA 6ffd72f5-aa4a-44c0-a313-d0aa83e41f7a dc44fa1deb68d66fd4f75eb1d219d1ab hg19 Buccal Cell Normal C3L-00457-51,C3L-00457-52 -C3L-00457.WXS.Nbc.hg38 C3L-00457 AML WXS buccal_normal CPT0054870005 4cfbc7ba-aeed-40f9-bd9e-cb7bdc0f1eea_wxs_gdc_realn.bam 36356538540 BAM NA f7352fa2-f8b2-48ff-8e77-a1850206d093 087f9633abb8e9eb8c16e934447631bf hg38 Buccal Cell Normal C3L-00457-51,C3L-00457-52 +C3L-00457.WXS.Nbc.ADNA_n6qRDW C3L-00457 AML WXS buccal_normal CPT0054870005 CPT0054870005.WholeExome.RP-1303.bam 27023691727 BAM NA 6ffd72f5-aa4a-44c0-a313-d0aa83e41f7a dc44fa1deb68d66fd4f75eb1d219d1ab hg19 Buccal Cell Normal C3L-00457-51,C3L-00457-52 additional_DNA ADNA_n6qRDW Duplicate item: Additional DNA requested +C3L-00457.WXS.Nbc.ADNA_n6qRDW.hg38 C3L-00457 AML WXS buccal_normal CPT0054870005 4cfbc7ba-aeed-40f9-bd9e-cb7bdc0f1eea_wxs_gdc_realn.bam 36356538540 BAM NA f7352fa2-f8b2-48ff-8e77-a1850206d093 087f9633abb8e9eb8c16e934447631bf hg38 Buccal Cell Normal C3L-00457-51,C3L-00457-52 additional_DNA ADNA_n6qRDW Duplicate item: Additional DNA requested C3L-00457.WXS.Tbm C3L-00457 AML WXS tumor_bone_marrow CPT0054850002 CPT0054850002.WholeExome.RP-1303.bam 34186082977 BAM NA f5d8c6aa-ebab-4d81-89ec-82b9621b1d35 288540238740efeb4114faba2b8b6979 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-00457-33,C3L-00457-54 C3L-00457.WXS.Tbm.hg38 C3L-00457 AML WXS tumor_bone_marrow CPT0054850002 6a3c7519-742a-4459-9abb-5c9a43c8d3f8_wxs_gdc_realn.bam 46247539036 BAM NA f92e948a-b6de-4b65-8740-32a0736bb939 639a7e7f7658e71d5219baa30e341067 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-00457-33,C3L-00457-54 C3L-00458.MethArray.Green.Tbm C3L-00458 AML Methylation Array tumor_bone_marrow CPT0054750002 202176290087_R08C01_Grn.idat 13676216 IDAT Green 10e504d1-a2ba-447b-8ddd-7b3c8149ebbe 3619538e1cfd65c627b6e683c3dda8ae NA Primary Blood Derived Cancer - Bone Marrow C3L-00458-54 @@ -2078,12 +2078,12 @@ C3L-00461.MethArray.Green.Tbm C3L-00461 AML Methylation Array tumor_bone_marrow C3L-00461.MethArray.Red.Tbm C3L-00461 AML Methylation Array tumor_bone_marrow CPT0054280002 202234380017_R03C01_Red.idat 13676231 IDAT Red accde596-435d-4897-bc37-00d41910308c 393a61d318e18c0046b7a44824f921dc NA Primary Blood Derived Cancer - Bone Marrow C3L-00461-34,C3L-00461-54 C3L-00461.miRNA-Seq.Tbm C3L-00461 AML miRNA-Seq tumor_bone_marrow CPT0018430002 180724_UNC32-K00270_0106_BHWK3MBBXX_TCGGCA_S23_L007_R1_001.unaln.bam 216191451 BAM NA c31cc2f3-2aca-4e22-9684-01717cfef908 e149c178af8ca7887393e9bdb2348f5e NA Primary Blood Derived Cancer - Bone Marrow C3L-00461-34,C3L-00461-56 C3L-00461.miRNA-Seq.Tbm.hg38 C3L-00461 AML miRNA-Seq tumor_bone_marrow CPT0018430002 ed2d3dba-77a9-4063-9210-7ccd3bd58c09_mirnaseq_gdc_realn.bam 224008004 BAM NA e3d80b94-530b-479b-8381-b1bea3569618 874ed830aeed3bedde5eb8084370c980 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-00461-34,C3L-00461-56 -C3L-00461.WGS.Nbc C3L-00461 AML WGS buccal_normal CPT0054300005 CPT0054300005.WholeGenome.RP-1303.bam 66376106285 BAM NA 36c2788d-a5c2-49fb-a0d4-2f16d55df5a5 8bf4427d1e15a067bea2419377289ea8 hg19 Buccal Cell Normal C3L-00461-52,C3L-00461-53 -C3L-00461.WGS.Nbc.hg38 C3L-00461 AML WGS buccal_normal CPT0054300005 576f9144-e4c0-4138-8b3c-a0e9dc35b87b_wgs_gdc_realn.bam 107116441783 BAM NA fd05b6b1-0ac6-4bf9-8489-4a6590c46cb5 a97dd43c0b926d9009f4fc4847b52071 hg38 Buccal Cell Normal C3L-00461-52,C3L-00461-53 +C3L-00461.WGS.Nbc.ADNA_n6PVk5 C3L-00461 AML WGS buccal_normal CPT0054300005 CPT0054300005.WholeGenome.RP-1303.bam 66376106285 BAM NA 36c2788d-a5c2-49fb-a0d4-2f16d55df5a5 8bf4427d1e15a067bea2419377289ea8 hg19 Buccal Cell Normal C3L-00461-52,C3L-00461-53 additional_DNA ADNA_n6PVk5 Duplicate item: Additional DNA requested +C3L-00461.WGS.Nbc.ADNA_n6PVk5.hg38 C3L-00461 AML WGS buccal_normal CPT0054300005 576f9144-e4c0-4138-8b3c-a0e9dc35b87b_wgs_gdc_realn.bam 107116441783 BAM NA fd05b6b1-0ac6-4bf9-8489-4a6590c46cb5 a97dd43c0b926d9009f4fc4847b52071 hg38 Buccal Cell Normal C3L-00461-52,C3L-00461-53 additional_DNA ADNA_n6PVk5 Duplicate item: Additional DNA requested C3L-00461.WGS.Tbm C3L-00461 AML WGS tumor_bone_marrow CPT0054280002 CPT0054280002.WholeGenome.RP-1303.bam 67791828203 BAM NA 059b3518-b86e-447c-8af6-4217dbdf9462 409b31fafa0e434d9b639912550ba8ca hg19 Primary Blood Derived Cancer - Bone Marrow C3L-00461-34,C3L-00461-54 C3L-00461.WGS.Tbm.hg38 C3L-00461 AML WGS tumor_bone_marrow CPT0054280002 b29cabaf-9072-4b83-ac90-f8507e088796_wgs_gdc_realn.bam 99882759725 BAM NA db50286b-5a53-4a87-90a5-d4d825b89908 bde4180f68d04b7c54762d8ffacebb5b hg38 Primary Blood Derived Cancer - Bone Marrow C3L-00461-34,C3L-00461-54 -C3L-00461.WXS.Nbc C3L-00461 AML WXS buccal_normal CPT0054300005 CPT0054300005.WholeExome.RP-1303.bam 42192603154 BAM NA 574c9ffc-0c42-45f6-98b9-0f7555d0eba9 6b494fc6bd3a8dfcf3e9195b95d1f65b hg19 Buccal Cell Normal C3L-00461-52,C3L-00461-53 -C3L-00461.WXS.Nbc.hg38 C3L-00461 AML WXS buccal_normal CPT0054300005 576f9144-e4c0-4138-8b3c-a0e9dc35b87b_wxs_gdc_realn.bam 57883503780 BAM NA bc5676e8-5b55-4959-b3e1-ed55610fd3f7 6eac084253a115cb998030053ea7d715 hg38 Buccal Cell Normal C3L-00461-52,C3L-00461-53 +C3L-00461.WXS.Nbc.ADNA_n6PVk5 C3L-00461 AML WXS buccal_normal CPT0054300005 CPT0054300005.WholeExome.RP-1303.bam 42192603154 BAM NA 574c9ffc-0c42-45f6-98b9-0f7555d0eba9 6b494fc6bd3a8dfcf3e9195b95d1f65b hg19 Buccal Cell Normal C3L-00461-52,C3L-00461-53 additional_DNA ADNA_n6PVk5 Duplicate item: Additional DNA requested +C3L-00461.WXS.Nbc.ADNA_n6PVk5.hg38 C3L-00461 AML WXS buccal_normal CPT0054300005 576f9144-e4c0-4138-8b3c-a0e9dc35b87b_wxs_gdc_realn.bam 57883503780 BAM NA bc5676e8-5b55-4959-b3e1-ed55610fd3f7 6eac084253a115cb998030053ea7d715 hg38 Buccal Cell Normal C3L-00461-52,C3L-00461-53 additional_DNA ADNA_n6PVk5 Duplicate item: Additional DNA requested C3L-00461.WXS.Tbm C3L-00461 AML WXS tumor_bone_marrow CPT0054280002 CPT0054280002.WholeExome.RP-1303.bam 32968059012 BAM NA e5172578-a4bf-4d8c-ad2c-7138e373ca00 adad845b22cdb0fa1ebd4a0795833edb hg19 Primary Blood Derived Cancer - Bone Marrow C3L-00461-34,C3L-00461-54 C3L-00461.WXS.Tbm.hg38 C3L-00461 AML WXS tumor_bone_marrow CPT0054280002 b29cabaf-9072-4b83-ac90-f8507e088796_wxs_gdc_realn.bam 44943072114 BAM NA 6e0d1eac-125f-4681-b45d-726b67b3bce2 1e88739ee7e6495eccee4f6122942f91 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-00461-34,C3L-00461-54 C3L-00465.MethArray.Green.Tbm C3L-00465 AML Methylation Array tumor_bone_marrow CPT0055020002 202178770045_R07C01_Grn.idat 13676241 IDAT Green d09228fb-fceb-43c7-a773-5e31c0b61b85 20f4f9be41897fbf933cc89ce7190956 NA Primary Blood Derived Cancer - Bone Marrow C3L-00465-54 @@ -2506,8 +2506,8 @@ C3L-00591.WXS.N C3L-00591 GBM WXS blood_normal CPT0015570002 CPT0015570002.Whole C3L-00591.WXS.N.hg38 C3L-00591 GBM WXS blood_normal CPT0015570002 3632d20f-f2f9-4939-878b-1037c915cea6_gdc_realn.bam 40142092326 BAM NA 8d341a31-492f-47fa-a957-c5b326b435d7 304706219bdba29e5c96fe907c33c048 hg38 Blood Derived Normal C3L-00591-31 C3L-00591.WXS.T C3L-00591 GBM WXS tumor CPT0017810007 CPT0017810007.WholeExome.RP-1303.bam 40617634776 BAM NA 521d3b15-a442-4132-abb6-6994aef5098b 694e3de43f5189bff18dfa8d3049e69e hg19 Primary Tumor C3L-00591-01,C3L-00591-03 C3L-00591.WXS.T.hg38 C3L-00591 GBM WXS tumor CPT0017810007 5736b539-4c8c-4b7e-b846-bdabc53b42c6_gdc_realn.bam 54898879964 BAM NA eb41c03c-43da-4fa5-8615-64032526be9c 789cad3547b2530b8ac46b18df5eeb5d hg38 Primary Tumor C3L-00591-01,C3L-00591-03 -C3L-00598.MethArray.Green.T C3L-00598 PDA Methylation Array tumor CPT0019410010 202176290087_R07C01_Grn.idat 13676216 IDAT Green bfd09202-b7de-4dc2-b517-93ac3704cdc0 565233a4e78c733a4d08b83d90bd94cb NA Primary Tumor C3L-00598-02,C3L-00598-03 -C3L-00598.MethArray.Red.T C3L-00598 PDA Methylation Array tumor CPT0019410010 202176290087_R07C01_Red.idat 13676216 IDAT Red 3fc12e75-d229-44ce-ad2f-4a7677130b7c 2cc8e25bde9c75a3c4012a601eb53aab NA Primary Tumor C3L-00598-02,C3L-00598-03 +C3L-00598.MethArray.Green.T.DEEP_vQZPEM C3L-00598 PDA Methylation Array tumor CPT0019410010 202176290087_R07C01_Grn.idat 13676216 IDAT Green bfd09202-b7de-4dc2-b517-93ac3704cdc0 565233a4e78c733a4d08b83d90bd94cb NA Primary Tumor C3L-00598-02,C3L-00598-03 deep_sequencing DEEP_vQZPEM Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-00598.MethArray.Red.T.DEEP_vQZPEM C3L-00598 PDA Methylation Array tumor CPT0019410010 202176290087_R07C01_Red.idat 13676216 IDAT Red 3fc12e75-d229-44ce-ad2f-4a7677130b7c 2cc8e25bde9c75a3c4012a601eb53aab NA Primary Tumor C3L-00598-02,C3L-00598-03 deep_sequencing DEEP_vQZPEM Duplicate item: Additional DNA for PDA Deep Sequencing C3L-00598.miRNA-Seq.T C3L-00598 PDA miRNA-Seq tumor CPT0019410007 181012_UNC32-K00270_0124_AH223CBBXY_CAGATC_S28_L004_R1_001.unaln.bam 218737465 BAM NA e1b0bfa6-bd6c-4ef5-bb84-efe879bd137a 8a42191575df0ff644a06976b1e5cba5 NA Primary Tumor C3L-00598-02,C3L-00598-03 C3L-00598.miRNA-Seq.T.hg38 C3L-00598 PDA miRNA-Seq tumor CPT0019410007 dd5f8bd8-28d2-4fa0-bb1c-a1ceb26dfd16_mirnaseq_gdc_realn.bam 241100929 BAM NA aa0de3bf-a63e-47fa-a199-f7aedd595e78 9b395544649c5638c2ef24a3f51138b2 hg38 Primary Tumor C3L-00598-02,C3L-00598-03 C3L-00598.RNA-Seq.chimeric.T.hg38 C3L-00598 PDA RNA-Seq tumor CPT0019410007 44dc96bd-d59e-4b31-8897-552d8ae9fd91.rna_seq.chimeric.gdc_realn.bam 149054649 BAM chimeric 83c60755-fba4-488d-ac2a-3c1eb4dd1ae2 72becf31bb1978fe7cd5518fa6d1494d hg38 Primary Tumor C3L-00598-02,C3L-00598-03 @@ -2518,12 +2518,12 @@ C3L-00598.RNA-Seq.transcriptome.T.hg38 C3L-00598 PDA RNA-Seq tumor CPT0019410007 C3L-00598.Targeted.T C3L-00598 PDA Targeted Sequencing tumor CPT0019410010_1 CPT0019410010_1.CustomSelection.RP-1303.PDO-18786.bam 5006116430 BAM NA fe200a18-cf92-48b3-a015-fb15ef6cae61 49d691358a4694ef1782fa70d2c39ae8 hg19 Primary Tumor C3L-00598-03 C3L-00598.WGS.N C3L-00598 PDA WGS blood_normal CPT0019480002 CPT0019480002.WholeGenome.RP-1303.bam 71276773943 BAM NA 57076ebe-b082-4baf-a180-7f416902087f 80e61aaa3fd8632976ff748e5870fa73 hg19 Blood Derived Normal C3L-00598-31 C3L-00598.WGS.N.hg38 C3L-00598 PDA WGS blood_normal CPT0019480002 033ec902-7b53-4260-ba74-cc11cdd77e17_gdc_realn.bam 106296469741 BAM NA 3807504c-554a-47af-b7ee-49701c01149e 67efbde2d3bffc6c4204c991b68e429b hg38 Blood Derived Normal C3L-00598-31 -C3L-00598.WGS.T C3L-00598 PDA WGS tumor CPT0019410010 CPT0019410010.WholeGenome.RP-1303.bam 71635096016 BAM NA 8d518512-f286-446f-bedd-d7ed0c48270f ad47c1d5d4f40dd01fbbc9c497e8fc1c hg19 Primary Tumor C3L-00598-02,C3L-00598-03 -C3L-00598.WGS.T.hg38 C3L-00598 PDA WGS tumor CPT0019410010 e7c86c73-63a8-4e75-b394-56dc2c0179ba_gdc_realn.bam 104996631654 BAM NA 5b203921-5eb7-4ab0-812a-76fe5353f9ec 1eaa85d282a1ad87e295ee187c0d61d3 hg38 Primary Tumor C3L-00598-02,C3L-00598-03 +C3L-00598.WGS.T.DEEP_vQZPEM C3L-00598 PDA WGS tumor CPT0019410010 CPT0019410010.WholeGenome.RP-1303.bam 71635096016 BAM NA 8d518512-f286-446f-bedd-d7ed0c48270f ad47c1d5d4f40dd01fbbc9c497e8fc1c hg19 Primary Tumor C3L-00598-02,C3L-00598-03 deep_sequencing DEEP_vQZPEM Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-00598.WGS.T.DEEP_vQZPEM.hg38 C3L-00598 PDA WGS tumor CPT0019410010 e7c86c73-63a8-4e75-b394-56dc2c0179ba_gdc_realn.bam 104996631654 BAM NA 5b203921-5eb7-4ab0-812a-76fe5353f9ec 1eaa85d282a1ad87e295ee187c0d61d3 hg38 Primary Tumor C3L-00598-02,C3L-00598-03 deep_sequencing DEEP_vQZPEM Duplicate item: Additional DNA for PDA Deep Sequencing C3L-00598.WXS.N C3L-00598 PDA WXS blood_normal CPT0019480002 CPT0019480002.WholeExome.RP-1303.bam 34380498573 BAM NA 81afc6ee-6698-4a2f-85c9-c85c26344cb7 29618bf44f4cee47bbe8a789e6537d66 hg19 Blood Derived Normal C3L-00598-31 C3L-00598.WXS.N.hg38 C3L-00598 PDA WXS blood_normal CPT0019480002 033ec902-7b53-4260-ba74-cc11cdd77e17_gdc_realn.bam 47512661135 BAM NA 803693f4-1923-4561-9f4f-624c62297c8e 75e3bed948b3c2c1446fc75d84cee0f9 hg38 Blood Derived Normal C3L-00598-31 -C3L-00598.WXS.T C3L-00598 PDA WXS tumor CPT0019410010 CPT0019410010.WholeExome.RP-1303.bam 38655092119 BAM NA 3f2557c9-3e7f-4e60-bb5a-da109d437f53 7b3f2a59412666abeb91f0a0f12e9583 hg19 Primary Tumor C3L-00598-02,C3L-00598-03 -C3L-00598.WXS.T.hg38 C3L-00598 PDA WXS tumor CPT0019410010 e7c86c73-63a8-4e75-b394-56dc2c0179ba_gdc_realn.bam 53045937423 BAM NA 977a6e57-0ca0-406d-b961-25bc29db9892 b1c40b426da9e0f6e6da7301d1b7c29a hg38 Primary Tumor C3L-00598-02,C3L-00598-03 +C3L-00598.WXS.T.DEEP_vQZPEM C3L-00598 PDA WXS tumor CPT0019410010 CPT0019410010.WholeExome.RP-1303.bam 38655092119 BAM NA 3f2557c9-3e7f-4e60-bb5a-da109d437f53 7b3f2a59412666abeb91f0a0f12e9583 hg19 Primary Tumor C3L-00598-02,C3L-00598-03 deep_sequencing DEEP_vQZPEM Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-00598.WXS.T.DEEP_vQZPEM.hg38 C3L-00598 PDA WXS tumor CPT0019410010 e7c86c73-63a8-4e75-b394-56dc2c0179ba_gdc_realn.bam 53045937423 BAM NA 977a6e57-0ca0-406d-b961-25bc29db9892 b1c40b426da9e0f6e6da7301d1b7c29a hg38 Primary Tumor C3L-00598-02,C3L-00598-03 deep_sequencing DEEP_vQZPEM Duplicate item: Additional DNA for PDA Deep Sequencing C3L-00598.WXS.T.hg38.high_cov C3L-00598 PDA WXS tumor CPT0019410010_1 c9763f30-8938-4c73-92a6-5e77b6085e89_wxs_gdc_realn.bam 94693187035 BAM NA 45d3fb68-6f0b-4aca-97cc-dbe03f9e358c 63974b94802db980061422e7901c4e4a hg38 Primary Tumor C3L-00598-03 .high_cov C3L-00598.WXS.T.high_cov C3L-00598 PDA WXS tumor CPT0019410010_1 CPT0019410010_1.WholeExome.RP-1303.bam 68863445948 BAM NA bfda8955-911d-4cb7-8346-631ef644dae4 771c776da1ee5807067825c839760027 hg19 Primary Tumor C3L-00598-03 .high_cov C3L-00599.MethArray.Green.T C3L-00599 PDA Methylation Array tumor CPT0081260007 202176290087_R04C01_Grn.idat 13676216 IDAT Green aeea580a-33d4-405a-9bd9-def98a86b0eb 99710e7806b82789e51e4cd5bb376edc NA Primary Tumor C3L-00599-01,C3L-00599-02,C3L-00599-03 @@ -2818,8 +2818,8 @@ C3L-00625.WXS.T.hg38.high_cov C3L-00625 PDA WXS tumor CPT0081470007_1 e9f04d79-6 C3L-00625.WXS.T.high_cov C3L-00625 PDA WXS tumor CPT0081470007_1 CPT0081470007_1.WholeExome.RP-1303.bam 70487273351 BAM NA 7c93d9f1-ada1-4085-8ce1-2cdbffcdae7c d35e91055738b5c8110e3f73b193e699 hg19 Primary Tumor C3L-00625-02 .high_cov C3L-00629.MethArray.Green.T C3L-00629 CM Methylation Array tumor CPT0017250007 202184990008_R07C01_Grn.idat 13676216 IDAT Green 0892796a-fc76-4af3-a325-6ac1c72ca01f c0481b068205815d3d743c8a4e1a9fed NA Primary Tumor C3L-00629-01,C3L-00629-02,C3L-00629-03 C3L-00629.MethArray.Red.T C3L-00629 CM Methylation Array tumor CPT0017250007 202184990008_R07C01_Red.idat 13676216 IDAT Red 8b4324ba-25a1-4025-a0f0-76495502d34a 7b7f8d0323f4b2f25ebb572967e0e867 NA Primary Tumor C3L-00629-01,C3L-00629-02,C3L-00629-03 -C3L-00629.miRNA-Seq.T C3L-00629 CM miRNA-Seq tumor CPT0017250010 181113_UNC31-K00269_0164_AH23NNBBXY_GTCCGC_S42_L004_R1_001.unaln.bam 110355841 BAM NA 054f201f-a539-4fb2-8d75-1dfb11483969 ed534abffb01bbb9e381b2a797558a9b NA Primary Tumor C3L-00629-01,C3L-00629-02,C3L-00629-03 -C3L-00629.miRNA-Seq.T.hg38 C3L-00629 CM miRNA-Seq tumor CPT0017250010 a98e11a7-b08e-4453-abd5-49c7dff19f53_mirnaseq_gdc_realn.bam 124123039 BAM NA ecf19dd9-e32f-49f4-a80f-af585e904d59 2b163f8ed04eaabf70010a706cbd474c hg38 Primary Tumor C3L-00629-01,C3L-00629-02,C3L-00629-03 +C3L-00629.miRNA-Seq.T.ARNA_vlMrQ0 C3L-00629 CM miRNA-Seq tumor CPT0017250010 181113_UNC31-K00269_0164_AH23NNBBXY_GTCCGC_S42_L004_R1_001.unaln.bam 110355841 BAM NA 054f201f-a539-4fb2-8d75-1dfb11483969 ed534abffb01bbb9e381b2a797558a9b NA Primary Tumor C3L-00629-01,C3L-00629-02,C3L-00629-03 additional_RNA ARNA_vlMrQ0 Duplicate item: Additional RNA requested +C3L-00629.miRNA-Seq.T.ARNA_vlMrQ0.hg38 C3L-00629 CM miRNA-Seq tumor CPT0017250010 a98e11a7-b08e-4453-abd5-49c7dff19f53_mirnaseq_gdc_realn.bam 124123039 BAM NA ecf19dd9-e32f-49f4-a80f-af585e904d59 2b163f8ed04eaabf70010a706cbd474c hg38 Primary Tumor C3L-00629-01,C3L-00629-02,C3L-00629-03 additional_RNA ARNA_vlMrQ0 Duplicate item: Additional RNA requested C3L-00629.RNA-Seq.chimeric.T.hg38 C3L-00629 CM RNA-Seq tumor CPT0017250014 119443df-0c3e-49ea-bdef-f4dfa0c1f2f7.rna_seq.chimeric.gdc_realn.bam 52556801 BAM chimeric c22213c4-7c0c-44cb-ab0f-3300cfda24bf 8c088d319833d9ed6593910db46a5e03 hg38 Primary Tumor C3L-00629-03 C3L-00629.RNA-Seq.genomic.T.hg38 C3L-00629 CM RNA-Seq tumor CPT0017250014 119443df-0c3e-49ea-bdef-f4dfa0c1f2f7.rna_seq.genomic.gdc_realn.bam 12626118670 BAM genomic 19487b43-4d42-496d-a845-5617f470a7b6 3d634114d35898fefa1479450554097f hg38 Primary Tumor C3L-00629-03 C3L-00629.RNA-Seq.R1.T C3L-00629 CM RNA-Seq tumor CPT0017250014 171011_UNC31-K00269_0086_AHLJLCBBXX_TAGCTT_S13_L004_R1_001.fastq.gz 5321994380 FASTQ NA dc60c8bd-59ca-4f9f-b6ad-ea12fcec0691 950f1a93cebc317546638b16f9b2f85b NA Primary Tumor C3L-00629-03 @@ -2970,13 +2970,13 @@ C3L-00766.WXS.T C3L-00766 CCRCC WXS tumor CPT0025170009 CPT0025170009.WholeExome C3L-00766.WXS.T.hg38 C3L-00766 CCRCC WXS tumor CPT0025170009 00e60ad6-4363-47ae-9f34-5a1f52af5ee6_gdc_realn.bam 33777289548 BAM NA 718c13b4-3d2c-4c14-b26b-e296227d7794 5250027ebfa2103507d2e2e79efa3392 hg38 Primary Tumor C3L-00766-01 C3L-00767.MethArray.Green.T C3L-00767 UCEC Methylation Array tumor CPT0026430009 202184900148_R01C01_Grn.idat 13676246 IDAT Green a9416b12-9b20-49ee-b8d0-dc2e5344a34a 99c3e0302c956615da71f3e2519f45b6 NA Primary Tumor C3L-00767-01 C3L-00767.MethArray.Red.T C3L-00767 UCEC Methylation Array tumor CPT0026430009 202184900148_R01C01_Red.idat 13676246 IDAT Red a33dbc52-6727-4876-b5ca-6870e9429740 43c92e06568a994b0d030436bdc9e00c NA Primary Tumor C3L-00767-01 -C3L-00767.miRNA-Seq.T C3L-00767 UCEC miRNA-Seq tumor CPT0026430006 180924_UNC31-K00269_0154_AHWTMLBBXX_CGTACG_S9_L001_R1_001.unaln.bam 214810997 BAM NA 1bd8a552-1204-4e63-9c90-6667da726b21 7bb11989f43ee9d491e7b9b992095df6 NA Primary Tumor C3L-00767-01 -C3L-00767.miRNA-Seq.T.hg38 C3L-00767 UCEC miRNA-Seq tumor CPT0026430006 0ebbce9f-8bc0-4f19-8b09-642abd559498_mirnaseq_gdc_realn.bam 244027324 BAM NA 447c423d-bcb4-4bf9-bf07-44fdb98d3564 45c0d8b4b428618ed7526ac455b8a29f hg38 Primary Tumor C3L-00767-01 -C3L-00767.RNA-Seq.chimeric.T.hg38 C3L-00767 UCEC RNA-Seq tumor CPT0026430006 7c439e7f-f6a2-4707-894e-d13bd196f54f.rna_seq.chimeric.gdc_realn.bam 75509986 BAM chimeric 7d3452b7-d8e8-42bd-b814-a47ef253d3c1 2bd8458cf34c447c75c9e14ee328ae61 hg38 Primary Tumor C3L-00767-01 -C3L-00767.RNA-Seq.genomic.T.hg38 C3L-00767 UCEC RNA-Seq tumor CPT0026430006 7c439e7f-f6a2-4707-894e-d13bd196f54f.rna_seq.genomic.gdc_realn.bam 9705398640 BAM genomic 16f1a126-ac4f-4076-bcfb-056be1e2532d 966fe8f1e13dd67abac9047f8c8ad430 hg38 Primary Tumor C3L-00767-01 -C3L-00767.RNA-Seq.R1.T C3L-00767 UCEC RNA-Seq tumor CPT0026430006 170912_UNC31-K00269_0081_AHL3YKBBXX_CAGATC_S15_L004_R1_001.fastq.gz 4544135726 FASTQ NA 398b396a-17ba-4210-a645-a0f049b6e01e f9a76468eaf9fc4d899e61790c5f33a4 NA Primary Tumor C3L-00767-01 -C3L-00767.RNA-Seq.R2.T C3L-00767 UCEC RNA-Seq tumor CPT0026430006 170912_UNC31-K00269_0081_AHL3YKBBXX_CAGATC_S15_L004_R2_001.fastq.gz 5025015263 FASTQ NA b906f8b8-457b-4eed-bcc9-e9fb458b8bfa f0011b33a0727cc97b7c7ae3ee1524a3 NA Primary Tumor C3L-00767-01 -C3L-00767.RNA-Seq.transcriptome.T.hg38 C3L-00767 UCEC RNA-Seq tumor CPT0026430006 7c439e7f-f6a2-4707-894e-d13bd196f54f.rna_seq.transcriptome.gdc_realn.bam 9439581458 BAM transcriptome 805c9ecc-96e4-44a8-9c67-3e3f05d707dd a24ac2b682b3ca3bfc42f60c04e8667a hg38 Primary Tumor C3L-00767-01 +C3L-00767.miRNA-Seq.T.ARNA_oyY6GN C3L-00767 UCEC miRNA-Seq tumor CPT0026430006 180924_UNC31-K00269_0154_AHWTMLBBXX_CGTACG_S9_L001_R1_001.unaln.bam 214810997 BAM NA 1bd8a552-1204-4e63-9c90-6667da726b21 7bb11989f43ee9d491e7b9b992095df6 NA Primary Tumor C3L-00767-01 additional_RNA ARNA_oyY6GN Duplicate item: Additional RNA requested +C3L-00767.miRNA-Seq.T.ARNA_oyY6GN.hg38 C3L-00767 UCEC miRNA-Seq tumor CPT0026430006 0ebbce9f-8bc0-4f19-8b09-642abd559498_mirnaseq_gdc_realn.bam 244027324 BAM NA 447c423d-bcb4-4bf9-bf07-44fdb98d3564 45c0d8b4b428618ed7526ac455b8a29f hg38 Primary Tumor C3L-00767-01 additional_RNA ARNA_oyY6GN Duplicate item: Additional RNA requested +C3L-00767.RNA-Seq.chimeric.T.ARNA_oyY6GN.hg38 C3L-00767 UCEC RNA-Seq tumor CPT0026430006 7c439e7f-f6a2-4707-894e-d13bd196f54f.rna_seq.chimeric.gdc_realn.bam 75509986 BAM chimeric 7d3452b7-d8e8-42bd-b814-a47ef253d3c1 2bd8458cf34c447c75c9e14ee328ae61 hg38 Primary Tumor C3L-00767-01 additional_RNA ARNA_oyY6GN Duplicate item: Additional RNA requested +C3L-00767.RNA-Seq.genomic.T.ARNA_oyY6GN.hg38 C3L-00767 UCEC RNA-Seq tumor CPT0026430006 7c439e7f-f6a2-4707-894e-d13bd196f54f.rna_seq.genomic.gdc_realn.bam 9705398640 BAM genomic 16f1a126-ac4f-4076-bcfb-056be1e2532d 966fe8f1e13dd67abac9047f8c8ad430 hg38 Primary Tumor C3L-00767-01 additional_RNA ARNA_oyY6GN Duplicate item: Additional RNA requested +C3L-00767.RNA-Seq.R1.T.ARNA_oyY6GN C3L-00767 UCEC RNA-Seq tumor CPT0026430006 170912_UNC31-K00269_0081_AHL3YKBBXX_CAGATC_S15_L004_R1_001.fastq.gz 4544135726 FASTQ NA 398b396a-17ba-4210-a645-a0f049b6e01e f9a76468eaf9fc4d899e61790c5f33a4 NA Primary Tumor C3L-00767-01 additional_RNA ARNA_oyY6GN Duplicate item: Additional RNA requested +C3L-00767.RNA-Seq.R2.T.ARNA_oyY6GN C3L-00767 UCEC RNA-Seq tumor CPT0026430006 170912_UNC31-K00269_0081_AHL3YKBBXX_CAGATC_S15_L004_R2_001.fastq.gz 5025015263 FASTQ NA b906f8b8-457b-4eed-bcc9-e9fb458b8bfa f0011b33a0727cc97b7c7ae3ee1524a3 NA Primary Tumor C3L-00767-01 additional_RNA ARNA_oyY6GN Duplicate item: Additional RNA requested +C3L-00767.RNA-Seq.transcriptome.T.ARNA_oyY6GN.hg38 C3L-00767 UCEC RNA-Seq tumor CPT0026430006 7c439e7f-f6a2-4707-894e-d13bd196f54f.rna_seq.transcriptome.gdc_realn.bam 9439581458 BAM transcriptome 805c9ecc-96e4-44a8-9c67-3e3f05d707dd a24ac2b682b3ca3bfc42f60c04e8667a hg38 Primary Tumor C3L-00767-01 additional_RNA ARNA_oyY6GN Duplicate item: Additional RNA requested C3L-00767.WGS.N C3L-00767 UCEC WGS blood_normal CPT0026490002 CPT0026490002.WholeGenome.RP-1303.bam 62340321709 BAM NA ac0f0450-8a1b-4289-bddb-a9355d1930bf 56c8691ff162c5337f71d74475a540e6 hg19 Blood Derived Normal C3L-00767-71 C3L-00767.WGS.N.hg38 C3L-00767 UCEC WGS blood_normal CPT0026490002 7993ec03-5c3f-4f2a-920d-33dbf262d40a_gdc_realn.bam 89893607496 BAM NA d859af69-ac8f-4a4a-a376-9a6af50c07f3 872ffd61ff2bb19f8bf9c3765d93b700 hg38 Blood Derived Normal C3L-00767-71 C3L-00767.WGS.T C3L-00767 UCEC WGS tumor CPT0026430009 CPT0026430009.WholeGenome.RP-1303.bam 61485896986 BAM NA 4d067b52-b0b1-4b49-9d8e-e7af4777913b 54c0a47e8bcce16af3acb2ecb7f4d113 hg19 Primary Tumor C3L-00767-01 @@ -3570,45 +3570,45 @@ C3L-00907.WXS.T C3L-00907 CCRCC WXS tumor CPT0064370006 CPT0064370006.WholeExome C3L-00907.WXS.T.HET_rp9Omk C3L-00907 CCRCC WXS tumor CPT0064380009 CPT0064380009.WholeExome.RP-1303.bam 22329579570 BAM NA 5e991954-3604-478b-aa3a-da2587b3a2e4 1d3b8b409fb421f1cd5bac210dc1d857 hg19 Primary Tumor C3L-00907-02 heterogeneity HET_rp9Omk Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-00907.WXS.T.HET_rp9PBB C3L-00907 CCRCC WXS tumor CPT0064390009 CPT0064390009.WholeExome.RP-1303.bam 22086387660 BAM NA 91890fd2-a52c-4107-a505-28abfc524cf7 33af2da0ae0511fc3afc67c438a2a9ad hg19 Primary Tumor C3L-00907-03 heterogeneity HET_rp9PBB Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-00907.WXS.T.hg38 C3L-00907 CCRCC WXS tumor CPT0064370006 f746e289-2012-475a-840c-dc31a8909963_gdc_realn.bam 42988709588 BAM NA 5b8f478a-209f-47bc-893b-5d7302cd4f79 73e343702883bd9a89a67d572341d3a7 hg38 Primary Tumor C3L-00907-01 -C3L-00908.MethArray.Green.T C3L-00908 CCRCC Methylation Array tumor CPT0086350006 203027390040_R02C01_Grn.idat 13676241 IDAT Green 3013b22a-439d-4497-ac9f-bf75810cd989 af7026f23787ddba6aa7f2ed6f5405aa NA Primary Tumor C3L-00908-01 C3L-00908.MethArray.Green.T.deprecated C3L-00908 CCRCC Methylation Array tumor CPT0086360009 202184900140_R04C01_Grn.idat 13676261 IDAT Green 098f45d0-13aa-4ca2-bffb-34c3a6cf0d5c 422f67f93dce0336fc874f8268f16de0 NA Primary Tumor C3L-00908-03 .deprecated -C3L-00908.MethArray.Red.T C3L-00908 CCRCC Methylation Array tumor CPT0086350006 203027390040_R02C01_Red.idat 13676241 IDAT Red 55c95b2e-0d7a-4c86-b2a8-5ee825a8512b 834f64fee4447329482d2358dbf4145a NA Primary Tumor C3L-00908-01 +C3L-00908.MethArray.Green.T.RDNA_ol2z7j C3L-00908 CCRCC Methylation Array tumor CPT0086350006 203027390040_R02C01_Grn.idat 13676241 IDAT Green 3013b22a-439d-4497-ac9f-bf75810cd989 af7026f23787ddba6aa7f2ed6f5405aa NA Primary Tumor C3L-00908-01 replacement_DNA RDNA_ol2z7j Duplicate item: Replacement DNA Distribution - original aliquot failed C3L-00908.MethArray.Red.T.deprecated C3L-00908 CCRCC Methylation Array tumor CPT0086360009 202184900140_R04C01_Red.idat 13676261 IDAT Red b3e7012a-66b0-4023-a59d-a89ceb1b3118 b9cacbd7ef67594fc80421d8902b71de NA Primary Tumor C3L-00908-03 .deprecated +C3L-00908.MethArray.Red.T.RDNA_ol2z7j C3L-00908 CCRCC Methylation Array tumor CPT0086350006 203027390040_R02C01_Red.idat 13676241 IDAT Red 55c95b2e-0d7a-4c86-b2a8-5ee825a8512b 834f64fee4447329482d2358dbf4145a NA Primary Tumor C3L-00908-01 replacement_DNA RDNA_ol2z7j Duplicate item: Replacement DNA Distribution - original aliquot failed C3L-00908.miRNA-Seq.A C3L-00908 CCRCC miRNA-Seq tissue_normal CPT0086370006 181108_UNC31-K00269_0163_BH23TVBBXY_AGTCAA_S13_L005_R1_001.unaln.bam 213873054 BAM NA 83df97b4-0757-4d5f-8698-cb7ea7a5feaf 64a1b3e4b04f3c60c019b96eb4768514 NA Solid Tissue Normal C3L-00908-06 C3L-00908.miRNA-Seq.A.hg38 C3L-00908 CCRCC miRNA-Seq tissue_normal CPT0086370006 173c0d6a-bc67-4a72-b6d3-b2a411e24785_mirnaseq_gdc_realn.bam 243270795 BAM NA 7e41687b-c9d2-451f-bd6c-473cc0c58f3d a33bf2470cb149afc4d3515a6ce83eff hg38 Solid Tissue Normal C3L-00908-06 -C3L-00908.miRNA-Seq.T C3L-00908 CCRCC miRNA-Seq tumor CPT0086350009 181113_UNC31-K00269_0164_AH23NNBBXY_CATGGC_S10_L005_R1_001.unaln.bam 159592216 BAM NA c7baf5bf-ac47-4c48-8613-d1740624348a 918420f6333943bca22ee271d18db2a3 NA Primary Tumor C3L-00908-01 -C3L-00908.miRNA-Seq.T.hg38 C3L-00908 CCRCC miRNA-Seq tumor CPT0086350009 33c921ea-b743-4d32-9c56-875de6028c71_mirnaseq_gdc_realn.bam 179925405 BAM NA 35b76590-bc93-4d51-86cc-58ea39c678b1 d9bb5104e97c611b1218318f1e27ea16 hg38 Primary Tumor C3L-00908-01 +C3L-00908.miRNA-Seq.T.RRNA_rokDXE C3L-00908 CCRCC miRNA-Seq tumor CPT0086350009 181113_UNC31-K00269_0164_AH23NNBBXY_CATGGC_S10_L005_R1_001.unaln.bam 159592216 BAM NA c7baf5bf-ac47-4c48-8613-d1740624348a 918420f6333943bca22ee271d18db2a3 NA Primary Tumor C3L-00908-01 replacement_RNA RRNA_rokDXE Duplicate item: Replacement RNA Distribution - original aliquot failed +C3L-00908.miRNA-Seq.T.RRNA_rokDXE.hg38 C3L-00908 CCRCC miRNA-Seq tumor CPT0086350009 33c921ea-b743-4d32-9c56-875de6028c71_mirnaseq_gdc_realn.bam 179925405 BAM NA 35b76590-bc93-4d51-86cc-58ea39c678b1 d9bb5104e97c611b1218318f1e27ea16 hg38 Primary Tumor C3L-00908-01 replacement_RNA RRNA_rokDXE Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-00908.RNA-Seq.chimeric.A.hg38 C3L-00908 CCRCC RNA-Seq tissue_normal CPT0086370006 33978301-eeb1-476e-a27e-8766cd745893.rna_seq.chimeric.gdc_realn.bam 81742297 BAM chimeric 0df337be-edde-4529-8b2b-54a4c1ace013 4b529e4d0aec0db285bf0680b22d7e8c hg38 Solid Tissue Normal C3L-00908-06 -C3L-00908.RNA-Seq.chimeric.T.hg38 C3L-00908 CCRCC RNA-Seq tumor CPT0086350009 4fd2b52f-511e-4b87-a93e-fffee98a4fb1.rna_seq.chimeric.gdc_realn.bam 45155082 BAM chimeric e3ad3c5f-2b8f-44bc-b7ff-d98803d93b6b 141c44222b9eccaf35402e9cbf8cc941 hg38 Primary Tumor C3L-00908-01 C3L-00908.RNA-Seq.chimeric.T.hg38.deprecated C3L-00908 CCRCC RNA-Seq tumor CPT0086360006 45aac17f-748d-4e45-9868-a92c7a080a65.rna_seq.chimeric.gdc_realn.bam 41299237 BAM chimeric 27290952-fff8-42ed-a3aa-1876caa8dd40 0fde308c07c0790ad4c285ac0f4451ba hg38 Primary Tumor C3L-00908-03 .deprecated +C3L-00908.RNA-Seq.chimeric.T.RRNA_rokDXE.hg38 C3L-00908 CCRCC RNA-Seq tumor CPT0086350009 4fd2b52f-511e-4b87-a93e-fffee98a4fb1.rna_seq.chimeric.gdc_realn.bam 45155082 BAM chimeric e3ad3c5f-2b8f-44bc-b7ff-d98803d93b6b 141c44222b9eccaf35402e9cbf8cc941 hg38 Primary Tumor C3L-00908-01 replacement_RNA RRNA_rokDXE Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-00908.RNA-Seq.genomic.A.hg38 C3L-00908 CCRCC RNA-Seq tissue_normal CPT0086370006 33978301-eeb1-476e-a27e-8766cd745893.rna_seq.genomic.gdc_realn.bam 6920387228 BAM genomic c0234479-43d9-41de-ae7b-a0658538cbdb 554ff6f903f2a55f492bface01cef1fc hg38 Solid Tissue Normal C3L-00908-06 -C3L-00908.RNA-Seq.genomic.T.hg38 C3L-00908 CCRCC RNA-Seq tumor CPT0086350009 4fd2b52f-511e-4b87-a93e-fffee98a4fb1.rna_seq.genomic.gdc_realn.bam 9458596524 BAM genomic bc81a137-597c-4a76-9736-e0ef13cd234a 9ea4e218ca3a17ec99761435f97c64e8 hg38 Primary Tumor C3L-00908-01 C3L-00908.RNA-Seq.genomic.T.hg38.deprecated C3L-00908 CCRCC RNA-Seq tumor CPT0086360006 45aac17f-748d-4e45-9868-a92c7a080a65.rna_seq.genomic.gdc_realn.bam 8713498273 BAM genomic d6a6daab-f92b-4280-aef4-5754730368fd 403e5a66072f7c810ca03ffbb9afe13a hg38 Primary Tumor C3L-00908-03 .deprecated +C3L-00908.RNA-Seq.genomic.T.RRNA_rokDXE.hg38 C3L-00908 CCRCC RNA-Seq tumor CPT0086350009 4fd2b52f-511e-4b87-a93e-fffee98a4fb1.rna_seq.genomic.gdc_realn.bam 9458596524 BAM genomic bc81a137-597c-4a76-9736-e0ef13cd234a 9ea4e218ca3a17ec99761435f97c64e8 hg38 Primary Tumor C3L-00908-01 replacement_RNA RRNA_rokDXE Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-00908.RNA-Seq.R1.A C3L-00908 CCRCC RNA-Seq tissue_normal CPT0086370006 171205_UNC32-K00270_0069_BHN2HGBBXX_AGTCAA_S12_L003_R1_001.fastq.gz 3538178356 FASTQ NA d7f5f1c4-4092-45ab-95f7-571f2aeb4b58 3be4f172a7798a029e44faabab7e5aec NA Solid Tissue Normal C3L-00908-06 -C3L-00908.RNA-Seq.R1.T C3L-00908 CCRCC RNA-Seq tumor CPT0086350009 180606_UNC32-K00270_0097_AHVCKFBBXX_TAGCTT_S25_L007_R1_001.fastq.gz 4497335523 FASTQ NA 7b04f1ce-15c3-43d2-9286-7a6d1f15e302 c0eb97ce345891af6daf78e0298b2701 NA Primary Tumor C3L-00908-01 C3L-00908.RNA-Seq.R1.T.deprecated C3L-00908 CCRCC RNA-Seq tumor CPT0086360006 171011_UNC31-K00269_0086_AHLJLCBBXX_GTCCGC_S9_L006_R1_001.fastq.gz 4675518805 FASTQ NA afd5ee0e-563c-4238-876a-a1f103037d5b 18912a5c516d47a67af05aebd310cb6b NA Primary Tumor C3L-00908-03 .deprecated +C3L-00908.RNA-Seq.R1.T.RRNA_rokDXE C3L-00908 CCRCC RNA-Seq tumor CPT0086350009 180606_UNC32-K00270_0097_AHVCKFBBXX_TAGCTT_S25_L007_R1_001.fastq.gz 4497335523 FASTQ NA 7b04f1ce-15c3-43d2-9286-7a6d1f15e302 c0eb97ce345891af6daf78e0298b2701 NA Primary Tumor C3L-00908-01 replacement_RNA RRNA_rokDXE Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-00908.RNA-Seq.R2.A C3L-00908 CCRCC RNA-Seq tissue_normal CPT0086370006 171205_UNC32-K00270_0069_BHN2HGBBXX_AGTCAA_S12_L003_R2_001.fastq.gz 3745507489 FASTQ NA d69e6d8c-0db1-43d0-817e-71306ba1e0b6 f9a0af7c4a60f562e361e9d71128b85f NA Solid Tissue Normal C3L-00908-06 -C3L-00908.RNA-Seq.R2.T C3L-00908 CCRCC RNA-Seq tumor CPT0086350009 180606_UNC32-K00270_0097_AHVCKFBBXX_TAGCTT_S25_L007_R2_001.fastq.gz 4812306259 FASTQ NA 4ba00e47-13e7-4f56-b8c4-77d73ba76363 13c2d5dd46289aeb707903a147444417 NA Primary Tumor C3L-00908-01 C3L-00908.RNA-Seq.R2.T.deprecated C3L-00908 CCRCC RNA-Seq tumor CPT0086360006 171011_UNC31-K00269_0086_AHLJLCBBXX_GTCCGC_S9_L006_R2_001.fastq.gz 5005750144 FASTQ NA 0e355758-ba51-4012-8001-df2c458e6742 2266ab7b0e9619b251438371ca3c2118 NA Primary Tumor C3L-00908-03 .deprecated +C3L-00908.RNA-Seq.R2.T.RRNA_rokDXE C3L-00908 CCRCC RNA-Seq tumor CPT0086350009 180606_UNC32-K00270_0097_AHVCKFBBXX_TAGCTT_S25_L007_R2_001.fastq.gz 4812306259 FASTQ NA 4ba00e47-13e7-4f56-b8c4-77d73ba76363 13c2d5dd46289aeb707903a147444417 NA Primary Tumor C3L-00908-01 replacement_RNA RRNA_rokDXE Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-00908.RNA-Seq.transcriptome.A.hg38 C3L-00908 CCRCC RNA-Seq tissue_normal CPT0086370006 33978301-eeb1-476e-a27e-8766cd745893.rna_seq.transcriptome.gdc_realn.bam 7596748895 BAM transcriptome fed71d5b-30dd-4a8a-a9e1-f105e171bfdb 7504b0ac6ef6f3f5c4ed09d45c01242d hg38 Solid Tissue Normal C3L-00908-06 -C3L-00908.RNA-Seq.transcriptome.T.hg38 C3L-00908 CCRCC RNA-Seq tumor CPT0086350009 4fd2b52f-511e-4b87-a93e-fffee98a4fb1.rna_seq.transcriptome.gdc_realn.bam 11850040045 BAM transcriptome f21afd3e-77f7-4f4a-834f-aef66726fc9c eea3ae120588bd6b2763cac2baf510f9 hg38 Primary Tumor C3L-00908-01 C3L-00908.RNA-Seq.transcriptome.T.hg38.deprecated C3L-00908 CCRCC RNA-Seq tumor CPT0086360006 45aac17f-748d-4e45-9868-a92c7a080a65.rna_seq.transcriptome.gdc_realn.bam 10307359310 BAM transcriptome 50c099e3-f37b-4e62-bf61-9f3730126961 96e93b8900ad9d3dc3ec5f7bdf06768b hg38 Primary Tumor C3L-00908-03 .deprecated +C3L-00908.RNA-Seq.transcriptome.T.RRNA_rokDXE.hg38 C3L-00908 CCRCC RNA-Seq tumor CPT0086350009 4fd2b52f-511e-4b87-a93e-fffee98a4fb1.rna_seq.transcriptome.gdc_realn.bam 11850040045 BAM transcriptome f21afd3e-77f7-4f4a-834f-aef66726fc9c eea3ae120588bd6b2763cac2baf510f9 hg38 Primary Tumor C3L-00908-01 replacement_RNA RRNA_rokDXE Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-00908.WGS.A C3L-00908 CCRCC WGS tissue_normal CPT0086370009 CPT0086370009.WholeGenome.RP-1303.bam 55614160288 BAM NA cfc1cfce-10fe-4132-8a7d-f0c17f9769dc d53670a31e44a2b09fffee26ada8728e hg19 Solid Tissue Normal C3L-00908-06 C3L-00908.WGS.A.hg38 C3L-00908 CCRCC WGS tissue_normal CPT0086370009 b24781e1-0f33-43d9-8170-f244f66254b5_wgs_gdc_realn.bam 83858918538 BAM NA b76815f5-7f34-444f-b515-073f3c0fd55d bff453956793aeb5cb46435f151ba533 hg38 Solid Tissue Normal C3L-00908-06 C3L-00908.WGS.N C3L-00908 CCRCC WGS blood_normal CPT0087380001 CPT0087380001.WholeGenome.RP-1303.bam 69005389034 BAM NA 54774f95-e0ed-4a0b-902c-c384803cae33 fd939819ecd82cdff5f16167e19f9c32 hg19 Blood Derived Normal C3L-00908-31 C3L-00908.WGS.N.hg38 C3L-00908 CCRCC WGS blood_normal CPT0087380001 c0292a50-51ae-4818-ba05-3d2a9534cf2b_gdc_realn.bam 105491829001 BAM NA d439db67-28d0-4b23-acfb-e87f913d6ada 5176c8427cd82b2796bd0e61c6334fcc hg38 Blood Derived Normal C3L-00908-31 -C3L-00908.WGS.T C3L-00908 CCRCC WGS tumor CPT0086350006 CPT0086350006.WholeGenome.RP-1303.bam 55596248074 BAM NA 745fe17e-baa3-4d88-bda4-e79e2ddbbda8 de15f508c7474a1e2b97f56a29e16528 hg19 Primary Tumor C3L-00908-01 C3L-00908.WGS.T.deprecated C3L-00908 CCRCC WGS tumor CPT0086360009 CPT0086360009.WholeGenome.RP-1303.bam 89053374471 BAM NA b501f200-b532-4a5c-b0f2-7f0ff1c6bd64 536341c7701d23e9c9334d1e55743944 hg19 Primary Tumor C3L-00908-03 .deprecated -C3L-00908.WGS.T.hg38 C3L-00908 CCRCC WGS tumor CPT0086350006 bbc3e5fa-d872-4922-912a-bfc9acdb58bb_wgs_gdc_realn.bam 81274335964 BAM NA 1da02c03-85b9-4039-8111-845895d9c3e1 f0a7e773469b0f20ea0b97c5a5448f3b hg38 Primary Tumor C3L-00908-01 C3L-00908.WGS.T.hg38.deprecated C3L-00908 CCRCC WGS tumor CPT0086360009 a26217f0-b46a-4f44-b45f-afe3874e6b38_gdc_realn.bam 136492159740 BAM NA 4702b461-f88e-4036-87cd-c8fc4ee0b733 ed3f6a0865cdf184a800f7b9f5dfe402 hg38 Primary Tumor C3L-00908-03 .deprecated +C3L-00908.WGS.T.RDNA_ol2z7j C3L-00908 CCRCC WGS tumor CPT0086350006 CPT0086350006.WholeGenome.RP-1303.bam 55596248074 BAM NA 745fe17e-baa3-4d88-bda4-e79e2ddbbda8 de15f508c7474a1e2b97f56a29e16528 hg19 Primary Tumor C3L-00908-01 replacement_DNA RDNA_ol2z7j Duplicate item: Replacement DNA Distribution - original aliquot failed +C3L-00908.WGS.T.RDNA_ol2z7j.hg38 C3L-00908 CCRCC WGS tumor CPT0086350006 bbc3e5fa-d872-4922-912a-bfc9acdb58bb_wgs_gdc_realn.bam 81274335964 BAM NA 1da02c03-85b9-4039-8111-845895d9c3e1 f0a7e773469b0f20ea0b97c5a5448f3b hg38 Primary Tumor C3L-00908-01 replacement_DNA RDNA_ol2z7j Duplicate item: Replacement DNA Distribution - original aliquot failed C3L-00908.WXS.A C3L-00908 CCRCC WXS tissue_normal CPT0086370009 CPT0086370009.WholeExome.RP-1303.bam 30544588614 BAM NA d4991d91-01ce-45a4-9b10-485aad476e6a b751d56da3f7b0ebb47da449ef7ed358 hg19 Solid Tissue Normal C3L-00908-06 C3L-00908.WXS.A.hg38 C3L-00908 CCRCC WXS tissue_normal CPT0086370009 b24781e1-0f33-43d9-8170-f244f66254b5_wxs_gdc_realn.bam 41542806405 BAM NA 07483db5-5911-49c3-ba62-ddbeb3f36763 a3f02afe2a04ad9f9a5262654dd86718 hg38 Solid Tissue Normal C3L-00908-06 C3L-00908.WXS.N C3L-00908 CCRCC WXS blood_normal CPT0087380001 CPT0087380001.WholeExome.RP-1303.bam 30365609689 BAM NA 5e5c70f1-421b-455e-974a-a7f7782c2ddc d73d36afe6381f4b44e0561f695473a9 hg19 Blood Derived Normal C3L-00908-31 C3L-00908.WXS.N.hg38 C3L-00908 CCRCC WXS blood_normal CPT0087380001 c0292a50-51ae-4818-ba05-3d2a9534cf2b_gdc_realn.bam 41730911569 BAM NA 9cf12b3e-3b97-4c25-ad51-d1eb46e5680d af151bc10b06cf1ddfa2b553fb3e4863 hg38 Blood Derived Normal C3L-00908-31 -C3L-00908.WXS.T C3L-00908 CCRCC WXS tumor CPT0086350006 CPT0086350006.WholeExome.RP-1303.bam 27152855614 BAM NA 09a2ea3e-93ba-499d-86b8-7e4ca639de66 527bd417b2de02d4b46010f801d38318 hg19 Primary Tumor C3L-00908-01 C3L-00908.WXS.T.deprecated C3L-00908 CCRCC WXS tumor CPT0086360009 CPT0086360009.WholeExome.RP-1303.bam 29790261749 BAM NA f4f582bd-83a1-4d41-a4cb-8664d0d070a4 cd447af368efb58b7861fbbd2930fe80 hg19 Primary Tumor C3L-00908-03 .deprecated -C3L-00908.WXS.T.hg38 C3L-00908 CCRCC WXS tumor CPT0086350006 bbc3e5fa-d872-4922-912a-bfc9acdb58bb_wxs_gdc_realn.bam 36474134197 BAM NA c10f8658-5a5b-4417-b979-4612c5a593a9 2b7fb5096a83be473b6effe3c1e5dd7f hg38 Primary Tumor C3L-00908-01 C3L-00908.WXS.T.hg38.deprecated C3L-00908 CCRCC WXS tumor CPT0086360009 a26217f0-b46a-4f44-b45f-afe3874e6b38_gdc_realn.bam 41321920933 BAM NA 7b0b6dc8-1437-4e91-a429-7bd9a48baa58 1f015c2e7f09eb87b9b567a4ac6bddc9 hg38 Primary Tumor C3L-00908-03 .deprecated +C3L-00908.WXS.T.RDNA_ol2z7j C3L-00908 CCRCC WXS tumor CPT0086350006 CPT0086350006.WholeExome.RP-1303.bam 27152855614 BAM NA 09a2ea3e-93ba-499d-86b8-7e4ca639de66 527bd417b2de02d4b46010f801d38318 hg19 Primary Tumor C3L-00908-01 replacement_DNA RDNA_ol2z7j Duplicate item: Replacement DNA Distribution - original aliquot failed +C3L-00908.WXS.T.RDNA_ol2z7j.hg38 C3L-00908 CCRCC WXS tumor CPT0086350006 bbc3e5fa-d872-4922-912a-bfc9acdb58bb_wxs_gdc_realn.bam 36474134197 BAM NA c10f8658-5a5b-4417-b979-4612c5a593a9 2b7fb5096a83be473b6effe3c1e5dd7f hg38 Primary Tumor C3L-00908-01 replacement_DNA RDNA_ol2z7j Duplicate item: Replacement DNA Distribution - original aliquot failed C3L-00910.MethArray.Green.A C3L-00910 CCRCC Methylation Array tissue_normal CPT0007870009 203027390029_R03C01_Grn.idat 13676246 IDAT Green ce7a64d5-0c3d-4257-beae-974cf92bb974 ec32b0d8c542bf62478b8eef6c75e8e3 NA Solid Tissue Normal C3L-00910-06 C3L-00910.MethArray.Green.T C3L-00910 CCRCC Methylation Array tumor CPT0007860009 202176290145_R03C01_Grn.idat 13676225 IDAT Green da68f598-4293-4596-a38d-f04ed4cac2f8 b48a389dd72389b89727940929a235bf NA Primary Tumor C3L-00910-02 C3L-00910.MethArray.Red.A C3L-00910 CCRCC Methylation Array tissue_normal CPT0007870009 203027390029_R03C01_Red.idat 13676246 IDAT Red 8a8605ac-fc32-4c40-bfa8-8f3df83d6a5b 47e4a67e542be95248284df8095e60f0 NA Solid Tissue Normal C3L-00910-06 @@ -3718,8 +3718,8 @@ C3L-00918.WXS.T C3L-00918 UCEC WXS tumor CPT0063790006 CPT0063790006.WholeExome. C3L-00918.WXS.T.hg38 C3L-00918 UCEC WXS tumor CPT0063790006 2d192478-8285-48eb-855b-40b8ce2a42a0_gdc_realn.bam 57688324627 BAM NA dbc8d39f-66cc-4ec1-8988-d6997c19f80d 03db8746cee8f48f92979dd9794ece0f hg38 Primary Tumor C3L-00918-01 C3L-00921.MethArray.Green.T C3L-00921 UCEC Methylation Array tumor CPT0064150007 202184990057_R08C01_Grn.idat 13676216 IDAT Green 1ef8c0c1-a75d-4a93-a5cb-e2fe55858fbd 27b4956ae0ece26a38447f50018deb6f NA Primary Tumor C3L-00921-02,C3L-00921-03 C3L-00921.MethArray.Red.T C3L-00921 UCEC Methylation Array tumor CPT0064150007 202184990057_R08C01_Red.idat 13676216 IDAT Red ec5b4e0e-9dcf-4431-82bc-ac86de5e6929 77738d0f37ad2827171c4862fa5f0a98 NA Primary Tumor C3L-00921-02,C3L-00921-03 -C3L-00921.miRNA-Seq.T C3L-00921 UCEC miRNA-Seq tumor CPT0064150010 181012_UNC32-K00270_0124_AH223CBBXY_CAAAAG_S2_L001_R1_001.unaln.bam 238853710 BAM NA f50bdf16-aa07-47d8-93dd-a13c78da85a5 5d142354e3bd4ca127fedc3141aa1ac9 NA Primary Tumor C3L-00921-02,C3L-00921-03 -C3L-00921.miRNA-Seq.T.hg38 C3L-00921 UCEC miRNA-Seq tumor CPT0064150010 b15faee2-7b32-4b28-9e58-b2feedd33cdf_mirnaseq_gdc_realn.bam 265239591 BAM NA 2b2cc310-0297-418b-b584-63db336bfcd6 a691105049edc1a8dde9e7da3de1ea35 hg38 Primary Tumor C3L-00921-02,C3L-00921-03 +C3L-00921.miRNA-Seq.T.ARNA_vwQoLV C3L-00921 UCEC miRNA-Seq tumor CPT0064150010 181012_UNC32-K00270_0124_AH223CBBXY_CAAAAG_S2_L001_R1_001.unaln.bam 238853710 BAM NA f50bdf16-aa07-47d8-93dd-a13c78da85a5 5d142354e3bd4ca127fedc3141aa1ac9 NA Primary Tumor C3L-00921-02,C3L-00921-03 additional_RNA ARNA_vwQoLV Duplicate item: Additional RNA requested +C3L-00921.miRNA-Seq.T.ARNA_vwQoLV.hg38 C3L-00921 UCEC miRNA-Seq tumor CPT0064150010 b15faee2-7b32-4b28-9e58-b2feedd33cdf_mirnaseq_gdc_realn.bam 265239591 BAM NA 2b2cc310-0297-418b-b584-63db336bfcd6 a691105049edc1a8dde9e7da3de1ea35 hg38 Primary Tumor C3L-00921-02,C3L-00921-03 additional_RNA ARNA_vwQoLV Duplicate item: Additional RNA requested C3L-00921.RNA-Seq.chimeric.T.hg38 C3L-00921 UCEC RNA-Seq tumor CPT0064150014 f2ff4194-2222-40d1-9e15-8db332bd0e1d.rna_seq.chimeric.gdc_realn.bam 63618055 BAM chimeric 713d7925-3c8b-4aa1-9886-631fcb3dc8be 8ff37901030ac798b5060c9c914909e9 hg38 Primary Tumor C3L-00921-02,C3L-00921-03 C3L-00921.RNA-Seq.genomic.T.hg38 C3L-00921 UCEC RNA-Seq tumor CPT0064150014 f2ff4194-2222-40d1-9e15-8db332bd0e1d.rna_seq.genomic.gdc_realn.bam 8017054272 BAM genomic b08ed935-eebe-4b03-be04-4ce805c0b479 b8d5defc7264de6842993c99a2573320 hg38 Primary Tumor C3L-00921-02,C3L-00921-03 C3L-00921.RNA-Seq.R1.T C3L-00921 UCEC RNA-Seq tumor CPT0064150014 171011_UNC31-K00269_0086_AHLJLCBBXX_CTTGTA_S7_L003_R1_001.fastq.gz 3584191981 FASTQ NA c8ac958e-2e20-4379-9568-7cc508e311de cd93965ee5b94e1f26b660f265784c4a NA Primary Tumor C3L-00921-02,C3L-00921-03 @@ -4575,8 +4575,8 @@ C3L-01031.WXS.T C3L-01031 PDA WXS tumor CPT0127270006 CPT0127270006.WholeExome.R C3L-01031.WXS.T.hg38 C3L-01031 PDA WXS tumor CPT0127270006 1f3f0768-6250-4695-8d3f-989ec70b0b7a_wxs_gdc_realn.bam 59367704682 BAM NA a4149f81-c773-48bf-98dd-65252c5b8e19 fb6ad71bfe1e6547a36b90ed0c276200 hg38 Primary Tumor C3L-01031-01 C3L-01031.WXS.T.hg38.high_cov C3L-01031 PDA WXS tumor CPT0127270006_1 00638581-641f-489f-b9a7-e3977e1f205a_wxs_gdc_realn.bam 108982492276 BAM NA de67e714-bfec-421b-8a64-30b7cc83d5d3 63a2b68c103461fb02bacb20e2cb2d15 hg38 Primary Tumor C3L-01031-01 .high_cov C3L-01031.WXS.T.high_cov C3L-01031 PDA WXS tumor CPT0127270006_1 CPT0127270006_1.WholeExome.RP-1303.bam 79057839542 BAM NA a6a35f8f-ef5f-4955-8022-fa8e688a01f6 5046ed28769b476596f5bc4282547461 hg19 Primary Tumor C3L-01031-01 .high_cov -C3L-01032.MethArray.Green.T C3L-01032 PDA Methylation Array tumor CPT0170510026 203561620054_R06C01_Grn.idat 13676231 IDAT Green 5352929d-5535-4b00-b982-878411b63c06 c2b60e544fbf0e10ab4c2ca97379b977 NA Primary Tumor C3L-01032-01 -C3L-01032.MethArray.Red.T C3L-01032 PDA Methylation Array tumor CPT0170510026 203561620054_R06C01_Red.idat 13676231 IDAT Red 7b6f794c-f6e3-4b16-ab8e-00ba973c4b65 4715356352c05a8be9e4cf3a452d582c NA Primary Tumor C3L-01032-01 +C3L-01032.MethArray.Green.T.BULK_PNN8DJn C3L-01032 PDA Methylation Array tumor CPT0170510026 203561620054_R06C01_Grn.idat 13676231 IDAT Green 5352929d-5535-4b00-b982-878411b63c06 c2b60e544fbf0e10ab4c2ca97379b977 NA Primary Tumor C3L-01032-01 bulk_DNA BULK_PNN8DJn Duplicate item: PDA Pilot - bulk-derived DNA +C3L-01032.MethArray.Red.T.BULK_PNN8DJn C3L-01032 PDA Methylation Array tumor CPT0170510026 203561620054_R06C01_Red.idat 13676231 IDAT Red 7b6f794c-f6e3-4b16-ab8e-00ba973c4b65 4715356352c05a8be9e4cf3a452d582c NA Primary Tumor C3L-01032-01 bulk_DNA BULK_PNN8DJn Duplicate item: PDA Pilot - bulk-derived DNA C3L-01032.miRNA-Seq.T C3L-01032 PDA miRNA-Seq tumor CPT0170510016 190108_UNC31-K00269_0176_AHYGLVBBXX_ACAGTG_S5_L002_R1_001.unaln.bam 202131610 BAM NA 97f69125-efcc-4e5a-9416-5510fff2fd5a 8522ffb627d0623e984b028cca8d2a55 NA Primary Tumor C3L-01032-01 C3L-01032.miRNA-Seq.T.hg38 C3L-01032 PDA miRNA-Seq tumor CPT0170510016 89b8448a-02ed-45c9-9838-b41e58a9dfbe_mirnaseq_gdc_realn.bam 223690190 BAM NA 532ec148-d2c3-42df-8d24-b9a4a378fb83 041f9c1c038cc4a0b7866e5014d68830 hg38 Primary Tumor C3L-01032-01 C3L-01032.RNA-Seq.chimeric.T.hg38 C3L-01032 PDA RNA-Seq tumor CPT0170510016 196e93f1-0a02-45f5-838a-2d60eb18695c.rna_seq.chimeric.gdc_realn.bam 23892892 BAM chimeric d3576bf1-0570-4868-a70c-6f6763660e94 ccddca618ac1d6b1d84bc2f16196dec2 hg38 Primary Tumor C3L-01032-01 @@ -4584,17 +4584,17 @@ C3L-01032.RNA-Seq.genomic.T.hg38 C3L-01032 PDA RNA-Seq tumor CPT0170510016 196e9 C3L-01032.RNA-Seq.R1.T C3L-01032 PDA RNA-Seq tumor CPT0170510016 190115_UNC31-K00269_0179_BH357YBBXY_ACAGTG_S3_L001_R1_001.fastq.gz 4897431197 FASTQ NA 7a970896-a786-4466-8b48-f0fc47eb3573 9b6ddcb70a653398f6933d4ba2185b9e NA Primary Tumor C3L-01032-01 C3L-01032.RNA-Seq.R2.T C3L-01032 PDA RNA-Seq tumor CPT0170510016 190115_UNC31-K00269_0179_BH357YBBXY_ACAGTG_S3_L001_R2_001.fastq.gz 5416472857 FASTQ NA 178f804a-0edc-4761-9125-5104b06a2443 308e5b22074d74b762d68cc3523e63da NA Primary Tumor C3L-01032-01 C3L-01032.RNA-Seq.transcriptome.T.hg38 C3L-01032 PDA RNA-Seq tumor CPT0170510016 196e93f1-0a02-45f5-838a-2d60eb18695c.rna_seq.transcriptome.gdc_realn.bam 10916791958 BAM transcriptome c2caa46b-1283-4ca6-ab9d-4e581a3380df 9a7eec8fd93fe3e5fa158c34dd6aee48 hg38 Primary Tumor C3L-01032-01 -C3L-01032.Targeted.T C3L-01032 PDA Targeted Sequencing tumor CPT0170510026 CPT0170510026.CustomSelection.RP-1303.PDO-18786.bam 4846685904 BAM NA 3eca7225-1860-4f9a-9ce4-56488aaffd20 a3dfd3370f3416b63564657217a685aa hg19 Primary Tumor C3L-01032-01 +C3L-01032.Targeted.T.BULK_PNN8DJn C3L-01032 PDA Targeted Sequencing tumor CPT0170510026 CPT0170510026.CustomSelection.RP-1303.PDO-18786.bam 4846685904 BAM NA 3eca7225-1860-4f9a-9ce4-56488aaffd20 a3dfd3370f3416b63564657217a685aa hg19 Primary Tumor C3L-01032-01 bulk_DNA BULK_PNN8DJn Duplicate item: PDA Pilot - bulk-derived DNA C3L-01032.WGS.N C3L-01032 PDA WGS blood_normal CPT0167270002 CPT0167270002.WholeGenome.RP-1303.bam 59559164807 BAM NA ec689404-8366-4793-aa48-7d7faacc975f b6156467e3763b1c39238fdb86bfd9ab hg19 Blood Derived Normal C3L-01032-31 C3L-01032.WGS.N.hg38 C3L-01032 PDA WGS blood_normal CPT0167270002 39fbddfe-218a-4a59-865e-4e4d45f136f7_wgs_gdc_realn.bam 87485264872 BAM NA fd2f7033-bbf5-4123-8239-e441e0142ef6 e1d24bcd2aa88684e95827a5c8540617 hg38 Blood Derived Normal C3L-01032-31 -C3L-01032.WGS.T C3L-01032 PDA WGS tumor CPT0170510026 CPT0170510026.WholeGenome.RP-1303.bam 65030423125 BAM NA cd756237-e800-4591-a9f5-e23142047d4b 91cacd2ceb0bf819b2a9a70e671ff29f hg19 Primary Tumor C3L-01032-01 -C3L-01032.WGS.T.hg38 C3L-01032 PDA WGS tumor CPT0170510026 b2031366-1cc1-48f4-a4d2-8754ad806cb6_wgs_gdc_realn.bam 95856631733 BAM NA aeb6c92c-5a7b-4439-b74d-b2c0fba9d359 c38c190e4a26b47361ecb5f0eef5c96c hg38 Primary Tumor C3L-01032-01 +C3L-01032.WGS.T.BULK_PNN8DJn C3L-01032 PDA WGS tumor CPT0170510026 CPT0170510026.WholeGenome.RP-1303.bam 65030423125 BAM NA cd756237-e800-4591-a9f5-e23142047d4b 91cacd2ceb0bf819b2a9a70e671ff29f hg19 Primary Tumor C3L-01032-01 bulk_DNA BULK_PNN8DJn Duplicate item: PDA Pilot - bulk-derived DNA +C3L-01032.WGS.T.BULK_PNN8DJn.hg38 C3L-01032 PDA WGS tumor CPT0170510026 b2031366-1cc1-48f4-a4d2-8754ad806cb6_wgs_gdc_realn.bam 95856631733 BAM NA aeb6c92c-5a7b-4439-b74d-b2c0fba9d359 c38c190e4a26b47361ecb5f0eef5c96c hg38 Primary Tumor C3L-01032-01 bulk_DNA BULK_PNN8DJn Duplicate item: PDA Pilot - bulk-derived DNA C3L-01032.WXS.N C3L-01032 PDA WXS blood_normal CPT0167270002 CPT0167270002.WholeExome.RP-1303.bam 29254406550 BAM NA 6f5110f3-ee1b-4870-846a-e4a07daaf8c7 7a98e97bea7a0b25e892afd9bb57eec9 hg19 Blood Derived Normal C3L-01032-31 C3L-01032.WXS.N.hg38 C3L-01032 PDA WXS blood_normal CPT0167270002 39fbddfe-218a-4a59-865e-4e4d45f136f7_wxs_gdc_realn.bam 39785289287 BAM NA 985e5e24-550a-4d9e-967b-108945601415 53570089d284b757275d1ab61df4aaab hg38 Blood Derived Normal C3L-01032-31 -C3L-01032.WXS.T.core.high_cov C3L-01032 PDA WXS tumor CPT0170510019 CPT0170510019.WholeExome.RP-1303.bam 60472160349 BAM NA cdeb2cfd-8a06-455e-8e84-b7b9235d2373 2c34dc6a2e82796659661516ba3a1f7a hg19 Primary Tumor C3L-01032-01 .core.high_cov -C3L-01032.WXS.T.hg38.core.high_cov C3L-01032 PDA WXS tumor CPT0170510019 d30ab124-bcd9-49ba-bf31-10a7bfa5cfdb_wxs_gdc_realn.bam 84162158646 BAM NA a5f1081e-8347-481c-8f09-cc68fdaa2e48 38a14481029991254a3f23154899fbe2 hg38 Primary Tumor C3L-01032-01 .core.high_cov -C3L-01032.WXS.T.hg38.high_cov C3L-01032 PDA WXS tumor CPT0170510026 b2031366-1cc1-48f4-a4d2-8754ad806cb6_wxs_gdc_realn.bam 63667596295 BAM NA e31e9424-a0b1-41c1-b75c-f3af979cc6f0 438e2c980054b4a65e3528fa4c5f954c hg38 Primary Tumor C3L-01032-01 .high_cov -C3L-01032.WXS.T.high_cov C3L-01032 PDA WXS tumor CPT0170510026 CPT0170510026.WholeExome.RP-1303.bam 45869354525 BAM NA b37b103a-d2b2-45a4-86f2-b26464796cfb 4679ab3cbdaef3d21174352ca48f7440 hg19 Primary Tumor C3L-01032-01 .high_cov +C3L-01032.WXS.T.BULK_PNN8DJn.hg38.high_cov C3L-01032 PDA WXS tumor CPT0170510026 b2031366-1cc1-48f4-a4d2-8754ad806cb6_wxs_gdc_realn.bam 63667596295 BAM NA e31e9424-a0b1-41c1-b75c-f3af979cc6f0 438e2c980054b4a65e3528fa4c5f954c hg38 Primary Tumor C3L-01032-01 .high_cov bulk_DNA BULK_PNN8DJn Duplicate item: PDA Pilot - bulk-derived DNA +C3L-01032.WXS.T.BULK_PNN8DJn.high_cov C3L-01032 PDA WXS tumor CPT0170510026 CPT0170510026.WholeExome.RP-1303.bam 45869354525 BAM NA b37b103a-d2b2-45a4-86f2-b26464796cfb 4679ab3cbdaef3d21174352ca48f7440 hg19 Primary Tumor C3L-01032-01 .high_cov bulk_DNA BULK_PNN8DJn Duplicate item: PDA Pilot - bulk-derived DNA +C3L-01032.WXS.T.CORE_G66EqK0.core.high_cov C3L-01032 PDA WXS tumor CPT0170510019 CPT0170510019.WholeExome.RP-1303.bam 60472160349 BAM NA cdeb2cfd-8a06-455e-8e84-b7b9235d2373 2c34dc6a2e82796659661516ba3a1f7a hg19 Primary Tumor C3L-01032-01 .core.high_cov core_DNA CORE_G66EqK0 Duplicate item: PDA Pilot - core-derived DNA +C3L-01032.WXS.T.CORE_G66EqK0.hg38.core.high_cov C3L-01032 PDA WXS tumor CPT0170510019 d30ab124-bcd9-49ba-bf31-10a7bfa5cfdb_wxs_gdc_realn.bam 84162158646 BAM NA a5f1081e-8347-481c-8f09-cc68fdaa2e48 38a14481029991254a3f23154899fbe2 hg38 Primary Tumor C3L-01032-01 .core.high_cov core_DNA CORE_G66EqK0 Duplicate item: PDA Pilot - core-derived DNA C3L-01033.MethArray.Green.T C3L-01033 CCRCC Methylation Array tumor CPT0170070006 203219670117_R04C01_Grn.idat 13676226 IDAT Green c3c45cb5-bf4b-400f-8066-8bef2305bc3d fe98a1d6bfc517cd89b8d5e32a1634d2 NA Primary Tumor C3L-01033-03 C3L-01033.MethArray.Red.T C3L-01033 CCRCC Methylation Array tumor CPT0170070006 203219670117_R04C01_Red.idat 13676226 IDAT Red 72ccf6d5-df17-4ed4-8b87-b4f8111d1b10 a35f5f79c831c40816b23bc24da0ff8f NA Primary Tumor C3L-01033-03 C3L-01033.miRNA-Seq.T C3L-01033 CCRCC miRNA-Seq tumor CPT0170070009 190130_UNC31-K00269_0188_BH2FGCBBXY_GTGGCC_S1_L004_R1_001.unaln.bam 180494762 BAM NA ae1f5daf-b9de-413f-a7ab-b43744eb7076 20a4192b9759a32fac43129e31f7b5df NA Primary Tumor C3L-01033-03 @@ -4684,6 +4684,8 @@ C3L-01037.WXS.N C3L-01037 PDA WXS blood_normal CPT0167230002 CPT0167230002.Whole C3L-01037.WXS.N.hg38 C3L-01037 PDA WXS blood_normal CPT0167230002 52ceffda-2a7b-4682-a7fe-3adfa2a3c703_wxs_gdc_realn.bam 38308740048 BAM NA d226760d-70d7-48be-a71f-14e4d5b6b65d 02008cfb97a45624a013a7f108af84bd hg38 Blood Derived Normal C3L-01037-31 C3L-01037.WXS.T.hg38.high_cov C3L-01037 PDA WXS tumor CPT0170240007 b75965f9-6de3-4257-9f86-ff21ca24c9f1_wxs_gdc_realn.bam 64811583822 BAM NA e9428ff1-b9b0-4d71-bac4-ad733aa7dab8 63f5435ff5f94ccd72454e2816c46b07 hg38 Primary Tumor C3L-01037-01 .high_cov C3L-01037.WXS.T.high_cov C3L-01037 PDA WXS tumor CPT0170240007 CPT0170240007.WholeExome.RP-1303.bam 46916744201 BAM NA 887b4768-2410-4457-9d7d-a5c5ea3348f1 d56f5ab857cc0437a879896439b68b45 hg19 Primary Tumor C3L-01037-01 .high_cov +C3L-01039.RNA-Seq.R1.T C3L-01039 PDA RNA-Seq tumor CPT0170340031 200807_UNC32-K00270_0255_AHHY2WBBXY_TGGCCGGT-TAGAGCGC_S7_L006_R1_001.fastq.gz 3261916364 FASTQ NA 42a2998d-a333-4029-a3bb-140902ba6638 90fa6a68d5808cfb203a1c6e33c3b649 NA Primary Tumor C3L-01039-03 +C3L-01039.RNA-Seq.R2.T C3L-01039 PDA RNA-Seq tumor CPT0170340031 200807_UNC32-K00270_0255_AHHY2WBBXY_TGGCCGGT-TAGAGCGC_S7_L006_R2_001.fastq.gz 3658194729 FASTQ NA 98741507-9f87-456c-8803-a2e4472b65e0 fc3204195784878fa93c30866a2d96f5 NA Primary Tumor C3L-01039-03 C3L-01040.MethArray.Green.T C3L-01040 GBM Methylation Array tumor CPT0171580011 203027390028_R06C01_Grn.idat 13676231 IDAT Green 7561727f-2db5-4d54-9e80-3dbec1e10bd6 38257262072b97dc7e7eae8db1206955 NA Primary Tumor C3L-01040-02,C3L-01040-03 C3L-01040.MethArray.Red.T C3L-01040 GBM Methylation Array tumor CPT0171580011 203027390028_R06C01_Red.idat 13676231 IDAT Red ff017231-75df-49ff-a006-59a6d68b665d b6e358cfd565bc881e7c3e9f03e38ad9 NA Primary Tumor C3L-01040-02,C3L-01040-03 C3L-01040.miRNA-Seq.T C3L-01040 GBM miRNA-Seq tumor CPT0171580014 181119_UNC31-K00269_0165_AH27WCBBXY_GTGGCC_S44_L002_R1_001.unaln.bam 276089687 BAM NA 81cef73b-464c-4fda-ba9f-d4300b045a3b 1014fa18be9388a12bcdc0f8b8503cd1 NA Primary Tumor C3L-01040-02,C3L-01040-03 @@ -5173,11 +5175,11 @@ C3L-01157.WXS.N.hg38 C3L-01157 GBM WXS blood_normal CPT0200400002 c3b0e158-5c09- C3L-01157.WXS.T C3L-01157 GBM WXS tumor CPT0199770006 CPT0199770006.WholeExome.RP-1303.bam 28639693248 BAM NA 2ce3e40c-e135-4c00-84eb-01bc70835751 69ca4149a07826f66d93a368ce8d788f hg19 Primary Tumor C3L-01157-03 C3L-01157.WXS.T.hg38 C3L-01157 GBM WXS tumor CPT0199770006 05f468bf-e2ce-480d-ad81-68644619e4ee_wxs_gdc_realn.bam 39984156211 BAM NA 493a7d81-351a-4cfa-a114-c691d7b968ed e49f436c2b7759089f213c99fe57afd7 hg38 Primary Tumor C3L-01157-03 C3L-01158.MethArray.Green.A C3L-01158 PDA Methylation Array tissue_normal CPT0171650055 203561620153_R04C01_Grn.idat 13676211 IDAT Green b4269624-ab84-4381-8ab1-d084614b9d0a d5d83b0dbde41c16d94677eeb9b9d265 NA Solid Tissue Normal C3L-01158-05 -C3L-01158.MethArray.Green.T C3L-01158 PDA Methylation Array tumor CPT0171630026 203561620053_R06C01_Grn.idat 13676211 IDAT Green 95ad2839-4704-49d4-8290-4e356c8936e5 6e725c1321fefa8010d529f2b0c1028d NA Primary Tumor C3L-01158-01 -C3L-01158.MethArray.Green.T.core C3L-01158 PDA Methylation Array tumor CPT0171630020 203561450030_R03C01_Grn.idat 13676216 IDAT Green 338e41cb-94cf-4e70-a201-5d728d4eaa94 a53456874ba3215ce87da536db04b3b4 NA Primary Tumor C3L-01158-01 .core +C3L-01158.MethArray.Green.T.BULK_PNN43nl C3L-01158 PDA Methylation Array tumor CPT0171630026 203561620053_R06C01_Grn.idat 13676211 IDAT Green 95ad2839-4704-49d4-8290-4e356c8936e5 6e725c1321fefa8010d529f2b0c1028d NA Primary Tumor C3L-01158-01 bulk_DNA BULK_PNN43nl Duplicate item: PDA Pilot - bulk-derived DNA +C3L-01158.MethArray.Green.T.CORE_J66534l.core C3L-01158 PDA Methylation Array tumor CPT0171630020 203561450030_R03C01_Grn.idat 13676216 IDAT Green 338e41cb-94cf-4e70-a201-5d728d4eaa94 a53456874ba3215ce87da536db04b3b4 NA Primary Tumor C3L-01158-01 .core core_DNA CORE_J66534l Duplicate item: PDA Pilot - core-derived DNA C3L-01158.MethArray.Red.A C3L-01158 PDA Methylation Array tissue_normal CPT0171650055 203561620153_R04C01_Red.idat 13676211 IDAT Red 5cf053e3-3e92-4953-8783-a9ad3517e4ee 41b1219fb0eb58583c059c8daca9c11a NA Solid Tissue Normal C3L-01158-05 -C3L-01158.MethArray.Red.T C3L-01158 PDA Methylation Array tumor CPT0171630026 203561620053_R06C01_Red.idat 13676211 IDAT Red e3f3ac72-1acc-4901-8cf1-69dcc575d8a0 844599bd6c04df52fdc5b24e1d6bf616 NA Primary Tumor C3L-01158-01 -C3L-01158.MethArray.Red.T.core C3L-01158 PDA Methylation Array tumor CPT0171630020 203561450030_R03C01_Red.idat 13676216 IDAT Red f5c99572-c417-4d5f-b190-6be9d47555fb 95e0608c10f97e72a32790db8511fecc NA Primary Tumor C3L-01158-01 .core +C3L-01158.MethArray.Red.T.BULK_PNN43nl C3L-01158 PDA Methylation Array tumor CPT0171630026 203561620053_R06C01_Red.idat 13676211 IDAT Red e3f3ac72-1acc-4901-8cf1-69dcc575d8a0 844599bd6c04df52fdc5b24e1d6bf616 NA Primary Tumor C3L-01158-01 bulk_DNA BULK_PNN43nl Duplicate item: PDA Pilot - bulk-derived DNA +C3L-01158.MethArray.Red.T.CORE_J66534l.core C3L-01158 PDA Methylation Array tumor CPT0171630020 203561450030_R03C01_Red.idat 13676216 IDAT Red f5c99572-c417-4d5f-b190-6be9d47555fb 95e0608c10f97e72a32790db8511fecc NA Primary Tumor C3L-01158-01 .core core_DNA CORE_J66534l Duplicate item: PDA Pilot - core-derived DNA C3L-01158.miRNA-Seq.T C3L-01158 PDA miRNA-Seq tumor CPT0171630017 190108_UNC31-K00269_0176_AHYGLVBBXX_ATCACG_S1_L002_R1_001.unaln.bam 167468804 BAM NA 31e8c10f-13ab-47a2-9e10-ed7187e28df0 e0663ca80e250032ea26c2c0b4267e70 NA Primary Tumor C3L-01158-01 C3L-01158.miRNA-Seq.T.hg38 C3L-01158 PDA miRNA-Seq tumor CPT0171630017 390f11e4-d8d0-41ba-8e37-b4ceceb124f4_mirnaseq_gdc_realn.bam 187473717 BAM NA 9ab97b2e-880d-4227-87d9-68f84972e2bf eb249f93efbf5796e833c1ad441887e7 hg38 Primary Tumor C3L-01158-01 C3L-01158.RNA-Seq.chimeric.T.hg38 C3L-01158 PDA RNA-Seq tumor CPT0171630017 8055c386-be6b-42c3-af1c-a6378e36b04f.rna_seq.chimeric.gdc_realn.bam 32770665 BAM chimeric 7933b77b-7cde-4ee3-ac57-a4b0055817f0 d3af687762126870a58a405f52171271 hg38 Primary Tumor C3L-01158-01 @@ -5185,25 +5187,25 @@ C3L-01158.RNA-Seq.genomic.T.hg38 C3L-01158 PDA RNA-Seq tumor CPT0171630017 8055c C3L-01158.RNA-Seq.R1.T C3L-01158 PDA RNA-Seq tumor CPT0171630017 190115_UNC31-K00269_0179_BH357YBBXY_ATCACG_S7_L002_R1_001.fastq.gz 4754861470 FASTQ NA ece270eb-efc7-440c-9a45-8c8000ba796c 8faa449e5cf9a16a7b19da3b82f0291e NA Primary Tumor C3L-01158-01 C3L-01158.RNA-Seq.R2.T C3L-01158 PDA RNA-Seq tumor CPT0171630017 190115_UNC31-K00269_0179_BH357YBBXY_ATCACG_S7_L002_R2_001.fastq.gz 4535272581 FASTQ NA cc148b01-aa6a-40cf-ac6c-75d6bbedd59b da1dd6c3a66dda928dcc199d64c8dc64 NA Primary Tumor C3L-01158-01 C3L-01158.RNA-Seq.transcriptome.T.hg38 C3L-01158 PDA RNA-Seq tumor CPT0171630017 8055c386-be6b-42c3-af1c-a6378e36b04f.rna_seq.transcriptome.gdc_realn.bam 10135311044 BAM transcriptome 5649b48f-6546-464e-872f-2eec6deb84b8 0d69a55edd899b5f0ffed4bc00243583 hg38 Primary Tumor C3L-01158-01 -C3L-01158.Targeted.T C3L-01158 PDA Targeted Sequencing tumor CPT0171630026 CPT0171630026.CustomSelection.RP-1303.PDO-18786.bam 4828424084 BAM NA 26b3e792-b801-48b8-9b91-0ae139fcc555 00061f66746ff4d5a795986cf7c142eb hg19 Primary Tumor C3L-01158-01 +C3L-01158.Targeted.T.BULK_PNN43nl C3L-01158 PDA Targeted Sequencing tumor CPT0171630026 CPT0171630026.CustomSelection.RP-1303.PDO-18786.bam 4828424084 BAM NA 26b3e792-b801-48b8-9b91-0ae139fcc555 00061f66746ff4d5a795986cf7c142eb hg19 Primary Tumor C3L-01158-01 bulk_DNA BULK_PNN43nl Duplicate item: PDA Pilot - bulk-derived DNA C3L-01158.WGS.N C3L-01158 PDA WGS blood_normal CPT0171560002 CPT0171560002.WholeGenome.RP-1303.bam 60515833377 BAM NA 301ba45f-36aa-44d0-a7de-d3b450ca4f2e 10ebe6de3cefc7cbc144f9941165eb1e hg19 Blood Derived Normal C3L-01158-31 C3L-01158.WGS.N.hg38 C3L-01158 PDA WGS blood_normal CPT0171560002 81ae0d3c-0a91-4f41-9d28-b0c866abac8e_wgs_gdc_realn.bam 87190218525 BAM NA 4b59a227-4b74-463b-b8c6-964f07c841b7 474da798a5c01d369023b994496dd8a6 hg38 Blood Derived Normal C3L-01158-31 -C3L-01158.WGS.T C3L-01158 PDA WGS tumor CPT0171630026 CPT0171630026.WholeGenome.RP-1303.bam 54567905966 BAM NA 2107111f-8f36-45e4-b3d3-dea6a8a4c90c 52f961df7ddf63a74007d75c3614ecf2 hg19 Primary Tumor C3L-01158-01 -C3L-01158.WGS.T.core C3L-01158 PDA WGS tumor CPT0171630020 CPT0171630020.WholeGenome.RP-1303.bam 77947699392 BAM NA fcbf52e0-3eaa-48f0-8f02-2628928080df 8dfd876c2a4bb02a45f48aabcc314d33 hg19 Primary Tumor C3L-01158-01 .core -C3L-01158.WGS.T.hg38 C3L-01158 PDA WGS tumor CPT0171630026 d50fb1bc-2197-437c-b9d6-b142fe878df6_wgs_gdc_realn.bam 77965649620 BAM NA dd325470-f95e-4515-92b7-b6e3f9f61b42 b8cac53ce1e5bf66be39df53b68ca8a4 hg38 Primary Tumor C3L-01158-01 -C3L-01158.WGS.T.hg38.core C3L-01158 PDA WGS tumor CPT0171630020 a3da4c4a-e715-44c1-bc5a-2a1cfbd0c4ee_wgs_gdc_realn.bam 110266028424 BAM NA 9829625a-e392-4560-b898-c677a3afbbb9 c5a9cece0cbb8c5823957ee9a5738595 hg38 Primary Tumor C3L-01158-01 .core +C3L-01158.WGS.T.BULK_PNN43nl C3L-01158 PDA WGS tumor CPT0171630026 CPT0171630026.WholeGenome.RP-1303.bam 54567905966 BAM NA 2107111f-8f36-45e4-b3d3-dea6a8a4c90c 52f961df7ddf63a74007d75c3614ecf2 hg19 Primary Tumor C3L-01158-01 bulk_DNA BULK_PNN43nl Duplicate item: PDA Pilot - bulk-derived DNA +C3L-01158.WGS.T.BULK_PNN43nl.hg38 C3L-01158 PDA WGS tumor CPT0171630026 d50fb1bc-2197-437c-b9d6-b142fe878df6_wgs_gdc_realn.bam 77965649620 BAM NA dd325470-f95e-4515-92b7-b6e3f9f61b42 b8cac53ce1e5bf66be39df53b68ca8a4 hg38 Primary Tumor C3L-01158-01 bulk_DNA BULK_PNN43nl Duplicate item: PDA Pilot - bulk-derived DNA +C3L-01158.WGS.T.CORE_J66534l.core C3L-01158 PDA WGS tumor CPT0171630020 CPT0171630020.WholeGenome.RP-1303.bam 77947699392 BAM NA fcbf52e0-3eaa-48f0-8f02-2628928080df 8dfd876c2a4bb02a45f48aabcc314d33 hg19 Primary Tumor C3L-01158-01 .core core_DNA CORE_J66534l Duplicate item: PDA Pilot - core-derived DNA +C3L-01158.WGS.T.CORE_J66534l.hg38.core C3L-01158 PDA WGS tumor CPT0171630020 a3da4c4a-e715-44c1-bc5a-2a1cfbd0c4ee_wgs_gdc_realn.bam 110266028424 BAM NA 9829625a-e392-4560-b898-c677a3afbbb9 c5a9cece0cbb8c5823957ee9a5738595 hg38 Primary Tumor C3L-01158-01 .core core_DNA CORE_J66534l Duplicate item: PDA Pilot - core-derived DNA C3L-01158.WXS.A C3L-01158 PDA WXS tissue_normal CPT0171650055 CPT0171650055.WholeExome.RP-1303.bam 39910866153 BAM NA f6b0e467-6f94-47b2-975d-e6a11ec14ad7 b756fa7b81328859d82c0f4eeff048ce hg19 Solid Tissue Normal C3L-01158-05 C3L-01158.WXS.A.hg38 C3L-01158 PDA WXS tissue_normal CPT0171650055 1e789670-d307-4a56-99ab-7bd348c1555e_wxs_gdc_realn.bam 55878504036 BAM NA d80b306c-5c0c-470d-a762-4b277f9acb66 dc01eb5993765358f8e4dcfd528d93fc hg38 Solid Tissue Normal C3L-01158-05 C3L-01158.WXS.N C3L-01158 PDA WXS blood_normal CPT0171560002 CPT0171560002.WholeExome.RP-1303.bam 27117657273 BAM NA c989a5e9-3ec9-4d76-9896-665db392d8fd 449f6308f9eedcec5f87e21573c19783 hg19 Blood Derived Normal C3L-01158-31 C3L-01158.WXS.N.hg38 C3L-01158 PDA WXS blood_normal CPT0171560002 81ae0d3c-0a91-4f41-9d28-b0c866abac8e_wxs_gdc_realn.bam 36792322242 BAM NA 65ade05f-b8cc-4d7d-b501-cd91d08e5885 7609959f62306cac59f64122f92c48aa hg38 Blood Derived Normal C3L-01158-31 -C3L-01158.WXS.T.core.high_cov C3L-01158 PDA WXS tumor CPT0171630020 CPT0171630020.WholeExome.RP-1303.bam 70747936289 BAM NA a9c6ef7e-e552-48bf-8d86-ad97cd828c25 18c43c10e1f1ef68d5353e30a6373750 hg19 Primary Tumor C3L-01158-01 .core.high_cov -C3L-01158.WXS.T.hg38.core.high_cov C3L-01158 PDA WXS tumor CPT0171630020 a3da4c4a-e715-44c1-bc5a-2a1cfbd0c4ee_wxs_gdc_realn.bam 97100762718 BAM NA 0026fb13-a3e7-405e-a4ac-7f108096399b 83a8504ac01cb52f1fa1bfd443c6c56c hg38 Primary Tumor C3L-01158-01 .core.high_cov -C3L-01158.WXS.T.hg38.high_cov C3L-01158 PDA WXS tumor CPT0171630026 d50fb1bc-2197-437c-b9d6-b142fe878df6_wxs_gdc_realn.bam 62459308600 BAM NA f72ee660-de37-46ad-840e-a64487b77e77 c7c301f7d5ee379ab96e331ea806c7c2 hg38 Primary Tumor C3L-01158-01 .high_cov -C3L-01158.WXS.T.high_cov C3L-01158 PDA WXS tumor CPT0171630026 CPT0171630026.WholeExome.RP-1303.bam 43909051885 BAM NA cc0b88e0-7026-4b54-bbb6-a3a09d280386 d624417699c5b6a927dee701a6a97103 hg19 Primary Tumor C3L-01158-01 .high_cov -C3L-01160.MethArray.Green.T C3L-01160 PDA Methylation Array tumor CPT0170600024 203561450073_R08C01_Grn.idat 13676221 IDAT Green 1951c2f6-4401-471c-803e-6fd787e360cf 2159d6b1bed93b26f41cff198a082633 NA Primary Tumor C3L-01160-01 -C3L-01160.MethArray.Green.T.core C3L-01160 PDA Methylation Array tumor CPT0170600018 203561450020_R02C01_Grn.idat 13676221 IDAT Green 7f160d98-c8ee-45b8-882f-9c3dd3af128d 252e8a869042a262cbfccd0e2c232fa5 NA Primary Tumor C3L-01160-01 .core -C3L-01160.MethArray.Red.T C3L-01160 PDA Methylation Array tumor CPT0170600024 203561450073_R08C01_Red.idat 13676221 IDAT Red 0435ae8c-b09a-4e10-b693-36024236cc65 e1b46ce99fbe74a7d1a2a56b2e4b46d9 NA Primary Tumor C3L-01160-01 -C3L-01160.MethArray.Red.T.core C3L-01160 PDA Methylation Array tumor CPT0170600018 203561450020_R02C01_Red.idat 13676221 IDAT Red 20da77de-bb22-4592-b9d5-8d6703d68dc9 eb683dcc135d39b487529e749a8ea4b8 NA Primary Tumor C3L-01160-01 .core +C3L-01158.WXS.T.BULK_PNN43nl.hg38.high_cov C3L-01158 PDA WXS tumor CPT0171630026 d50fb1bc-2197-437c-b9d6-b142fe878df6_wxs_gdc_realn.bam 62459308600 BAM NA f72ee660-de37-46ad-840e-a64487b77e77 c7c301f7d5ee379ab96e331ea806c7c2 hg38 Primary Tumor C3L-01158-01 .high_cov bulk_DNA BULK_PNN43nl Duplicate item: PDA Pilot - bulk-derived DNA +C3L-01158.WXS.T.BULK_PNN43nl.high_cov C3L-01158 PDA WXS tumor CPT0171630026 CPT0171630026.WholeExome.RP-1303.bam 43909051885 BAM NA cc0b88e0-7026-4b54-bbb6-a3a09d280386 d624417699c5b6a927dee701a6a97103 hg19 Primary Tumor C3L-01158-01 .high_cov bulk_DNA BULK_PNN43nl Duplicate item: PDA Pilot - bulk-derived DNA +C3L-01158.WXS.T.CORE_J66534l.core.high_cov C3L-01158 PDA WXS tumor CPT0171630020 CPT0171630020.WholeExome.RP-1303.bam 70747936289 BAM NA a9c6ef7e-e552-48bf-8d86-ad97cd828c25 18c43c10e1f1ef68d5353e30a6373750 hg19 Primary Tumor C3L-01158-01 .core.high_cov core_DNA CORE_J66534l Duplicate item: PDA Pilot - core-derived DNA +C3L-01158.WXS.T.CORE_J66534l.hg38.core.high_cov C3L-01158 PDA WXS tumor CPT0171630020 a3da4c4a-e715-44c1-bc5a-2a1cfbd0c4ee_wxs_gdc_realn.bam 97100762718 BAM NA 0026fb13-a3e7-405e-a4ac-7f108096399b 83a8504ac01cb52f1fa1bfd443c6c56c hg38 Primary Tumor C3L-01158-01 .core.high_cov core_DNA CORE_J66534l Duplicate item: PDA Pilot - core-derived DNA +C3L-01160.MethArray.Green.T.BULK_NkkyJMp C3L-01160 PDA Methylation Array tumor CPT0170600024 203561450073_R08C01_Grn.idat 13676221 IDAT Green 1951c2f6-4401-471c-803e-6fd787e360cf 2159d6b1bed93b26f41cff198a082633 NA Primary Tumor C3L-01160-01 bulk_DNA BULK_NkkyJMp Duplicate item: PDA Pilot - bulk-derived DNA +C3L-01160.MethArray.Green.T.CORE_ERRmwz0.core C3L-01160 PDA Methylation Array tumor CPT0170600018 203561450020_R02C01_Grn.idat 13676221 IDAT Green 7f160d98-c8ee-45b8-882f-9c3dd3af128d 252e8a869042a262cbfccd0e2c232fa5 NA Primary Tumor C3L-01160-01 .core core_DNA CORE_ERRmwz0 Duplicate item: PDA Pilot - core-derived DNA +C3L-01160.MethArray.Red.T.BULK_NkkyJMp C3L-01160 PDA Methylation Array tumor CPT0170600024 203561450073_R08C01_Red.idat 13676221 IDAT Red 0435ae8c-b09a-4e10-b693-36024236cc65 e1b46ce99fbe74a7d1a2a56b2e4b46d9 NA Primary Tumor C3L-01160-01 bulk_DNA BULK_NkkyJMp Duplicate item: PDA Pilot - bulk-derived DNA +C3L-01160.MethArray.Red.T.CORE_ERRmwz0.core C3L-01160 PDA Methylation Array tumor CPT0170600018 203561450020_R02C01_Red.idat 13676221 IDAT Red 20da77de-bb22-4592-b9d5-8d6703d68dc9 eb683dcc135d39b487529e749a8ea4b8 NA Primary Tumor C3L-01160-01 .core core_DNA CORE_ERRmwz0 Duplicate item: PDA Pilot - core-derived DNA C3L-01160.miRNA-Seq.T C3L-01160 PDA miRNA-Seq tumor CPT0170600015 190108_UNC31-K00269_0176_AHYGLVBBXX_CGATGT_S2_L002_R1_001.unaln.bam 221634763 BAM NA e3473974-ec7c-4133-b635-1ca02d4721c9 85eea2ca93ffcd5d5695ed13c472576e NA Primary Tumor C3L-01160-01 C3L-01160.miRNA-Seq.T.hg38 C3L-01160 PDA miRNA-Seq tumor CPT0170600015 fad624ff-e1cb-4c9f-a5fd-4c771225127d_mirnaseq_gdc_realn.bam 241614413 BAM NA 313d4c80-9294-44eb-b9a3-a782d4529e2b 687f82ec4c1361fbfe46948ca80e5cdc hg38 Primary Tumor C3L-01160-01 C3L-01160.RNA-Seq.chimeric.T.hg38 C3L-01160 PDA RNA-Seq tumor CPT0170600015 45ee9cab-619e-404f-8d91-32fa6a0f2e60.rna_seq.chimeric.gdc_realn.bam 33480621 BAM chimeric be5f89fe-35b6-4b4f-951c-9bdb5a18937d 1527b9307b54f7953fd3c230e9309f45 hg38 Primary Tumor C3L-01160-01 @@ -5211,19 +5213,19 @@ C3L-01160.RNA-Seq.genomic.T.hg38 C3L-01160 PDA RNA-Seq tumor CPT0170600015 45ee9 C3L-01160.RNA-Seq.R1.T C3L-01160 PDA RNA-Seq tumor CPT0170600015 190115_UNC31-K00269_0179_BH357YBBXY_CGATGT_S6_L002_R1_001.fastq.gz 4360439785 FASTQ NA f65ed51b-3ffb-4d6d-8b3b-4cc508e8e68b 7438c37cc32841ff81f6c2df1ddb69d0 NA Primary Tumor C3L-01160-01 C3L-01160.RNA-Seq.R2.T C3L-01160 PDA RNA-Seq tumor CPT0170600015 190115_UNC31-K00269_0179_BH357YBBXY_CGATGT_S6_L002_R2_001.fastq.gz 4741609485 FASTQ NA 20a9db35-056d-43aa-b71d-dea448930ef0 be78f4274c931011a1fcdb9a22845c67 NA Primary Tumor C3L-01160-01 C3L-01160.RNA-Seq.transcriptome.T.hg38 C3L-01160 PDA RNA-Seq tumor CPT0170600015 45ee9cab-619e-404f-8d91-32fa6a0f2e60.rna_seq.transcriptome.gdc_realn.bam 9169790876 BAM transcriptome 2bdffa7b-e204-499f-88b3-087ed1f1f04b cf795a3f5e8baa0969f12055d8b5f7a0 hg38 Primary Tumor C3L-01160-01 -C3L-01160.Targeted.T C3L-01160 PDA Targeted Sequencing tumor CPT0170600024 CPT0170600024.CustomSelection.RP-1303.PDO-18786.bam 5303930441 BAM NA c32325ff-ec0c-485c-b6e4-d3423aa3f678 56f548b3c3e0f10e2462a1147c48e09c hg19 Primary Tumor C3L-01160-01 +C3L-01160.Targeted.T.BULK_NkkyJMp C3L-01160 PDA Targeted Sequencing tumor CPT0170600024 CPT0170600024.CustomSelection.RP-1303.PDO-18786.bam 5303930441 BAM NA c32325ff-ec0c-485c-b6e4-d3423aa3f678 56f548b3c3e0f10e2462a1147c48e09c hg19 Primary Tumor C3L-01160-01 bulk_DNA BULK_NkkyJMp Duplicate item: PDA Pilot - bulk-derived DNA C3L-01160.WGS.N C3L-01160 PDA WGS blood_normal CPT0167290002 CPT0167290002.WholeGenome.RP-1303.bam 64378887116 BAM NA 3bc55e0a-e5f9-498b-9516-e25f1b171625 6a31044e1774ec0f6a28050718155cd5 hg19 Blood Derived Normal C3L-01160-31 C3L-01160.WGS.N.hg38 C3L-01160 PDA WGS blood_normal CPT0167290002 07384100-195f-4071-a266-1ba880b66180_wgs_gdc_realn.bam 92607286794 BAM NA 159ed349-6664-4f63-a807-2c0ec490012b f33f7b553e8b8abcc48964a03f773c99 hg38 Blood Derived Normal C3L-01160-31 -C3L-01160.WGS.T C3L-01160 PDA WGS tumor CPT0170600024 CPT0170600024.WholeGenome.RP-1303.bam 67952930675 BAM NA df08c8cd-0ab1-4ea0-9471-4dd7458247d9 c5d6274f471be852614a3a9f0b07e813 hg19 Primary Tumor C3L-01160-01 -C3L-01160.WGS.T.core C3L-01160 PDA WGS tumor CPT0170600018 CPT0170600018.WholeGenome.RP-1303.bam 64661419007 BAM NA e4454b36-afcf-4a80-a7a8-18d4b3af4cf0 3b727abd21ea98718412b97f20157e8e hg19 Primary Tumor C3L-01160-01 .core -C3L-01160.WGS.T.hg38 C3L-01160 PDA WGS tumor CPT0170600024 2df2e6e8-e52d-44fe-8fa0-b2fb6a0f37cf_wgs_gdc_realn.bam 96428254780 BAM NA 05cb8a97-9225-4a2c-b9e4-048375f3478d 808a5270db25c341e14c9d040aaa7e33 hg38 Primary Tumor C3L-01160-01 -C3L-01160.WGS.T.hg38.core C3L-01160 PDA WGS tumor CPT0170600018 a8c4506f-92ba-4202-9c7b-ad08ebfb3b64_wgs_gdc_realn.bam 92384111277 BAM NA 1000b82e-99a4-4743-90b4-625b6dc12984 7277b4142209956bb6558dfa255dd487 hg38 Primary Tumor C3L-01160-01 .core +C3L-01160.WGS.T.BULK_NkkyJMp C3L-01160 PDA WGS tumor CPT0170600024 CPT0170600024.WholeGenome.RP-1303.bam 67952930675 BAM NA df08c8cd-0ab1-4ea0-9471-4dd7458247d9 c5d6274f471be852614a3a9f0b07e813 hg19 Primary Tumor C3L-01160-01 bulk_DNA BULK_NkkyJMp Duplicate item: PDA Pilot - bulk-derived DNA +C3L-01160.WGS.T.BULK_NkkyJMp.hg38 C3L-01160 PDA WGS tumor CPT0170600024 2df2e6e8-e52d-44fe-8fa0-b2fb6a0f37cf_wgs_gdc_realn.bam 96428254780 BAM NA 05cb8a97-9225-4a2c-b9e4-048375f3478d 808a5270db25c341e14c9d040aaa7e33 hg38 Primary Tumor C3L-01160-01 bulk_DNA BULK_NkkyJMp Duplicate item: PDA Pilot - bulk-derived DNA +C3L-01160.WGS.T.CORE_ERRmwz0.core C3L-01160 PDA WGS tumor CPT0170600018 CPT0170600018.WholeGenome.RP-1303.bam 64661419007 BAM NA e4454b36-afcf-4a80-a7a8-18d4b3af4cf0 3b727abd21ea98718412b97f20157e8e hg19 Primary Tumor C3L-01160-01 .core core_DNA CORE_ERRmwz0 Duplicate item: PDA Pilot - core-derived DNA +C3L-01160.WGS.T.CORE_ERRmwz0.hg38.core C3L-01160 PDA WGS tumor CPT0170600018 a8c4506f-92ba-4202-9c7b-ad08ebfb3b64_wgs_gdc_realn.bam 92384111277 BAM NA 1000b82e-99a4-4743-90b4-625b6dc12984 7277b4142209956bb6558dfa255dd487 hg38 Primary Tumor C3L-01160-01 .core core_DNA CORE_ERRmwz0 Duplicate item: PDA Pilot - core-derived DNA C3L-01160.WXS.N C3L-01160 PDA WXS blood_normal CPT0167290002 CPT0167290002.WholeExome.RP-1303.bam 24421148529 BAM NA afa7c130-3731-41ca-a718-fbdf0600a69a d111ad4dc20f7c2bd14b5f08e61f54e6 hg19 Blood Derived Normal C3L-01160-31 C3L-01160.WXS.N.hg38 C3L-01160 PDA WXS blood_normal CPT0167290002 07384100-195f-4071-a266-1ba880b66180_wxs_gdc_realn.bam 33237579668 BAM NA 3cde2ea0-7e8b-4f0d-afc2-c0cb05a56245 8f69626d2497a615179f52cf6589d1b6 hg38 Blood Derived Normal C3L-01160-31 -C3L-01160.WXS.T.core.high_cov C3L-01160 PDA WXS tumor CPT0170600018 CPT0170600018.WholeExome.RP-1303.bam 65639438807 BAM NA 3ad0348b-748f-4318-83ca-d3e13e2a42db 4e2044d8fb0a94391757a5f185fc32c5 hg19 Primary Tumor C3L-01160-01 .core.high_cov -C3L-01160.WXS.T.hg38.core.high_cov C3L-01160 PDA WXS tumor CPT0170600018 a8c4506f-92ba-4202-9c7b-ad08ebfb3b64_wxs_gdc_realn.bam 91330545140 BAM NA b515de0e-fcee-4a88-85f6-29e4dc115ccc eb74f04693eb9011204a648f9a831134 hg38 Primary Tumor C3L-01160-01 .core.high_cov -C3L-01160.WXS.T.hg38.high_cov C3L-01160 PDA WXS tumor CPT0170600024 2df2e6e8-e52d-44fe-8fa0-b2fb6a0f37cf_wxs_gdc_realn.bam 80069242436 BAM NA ad37577b-d536-4929-9cbc-cb39d4bb9969 7a58e168809bef442c484ba5f55020b2 hg38 Primary Tumor C3L-01160-01 .high_cov -C3L-01160.WXS.T.high_cov C3L-01160 PDA WXS tumor CPT0170600024 CPT0170600024.WholeExome.RP-1303.bam 56175912575 BAM NA 9de76634-b251-4bdd-805d-5070367b7dc9 6b6a142e029fa48832df21f540d3509a hg19 Primary Tumor C3L-01160-01 .high_cov +C3L-01160.WXS.T.BULK_NkkyJMp.hg38.high_cov C3L-01160 PDA WXS tumor CPT0170600024 2df2e6e8-e52d-44fe-8fa0-b2fb6a0f37cf_wxs_gdc_realn.bam 80069242436 BAM NA ad37577b-d536-4929-9cbc-cb39d4bb9969 7a58e168809bef442c484ba5f55020b2 hg38 Primary Tumor C3L-01160-01 .high_cov bulk_DNA BULK_NkkyJMp Duplicate item: PDA Pilot - bulk-derived DNA +C3L-01160.WXS.T.BULK_NkkyJMp.high_cov C3L-01160 PDA WXS tumor CPT0170600024 CPT0170600024.WholeExome.RP-1303.bam 56175912575 BAM NA 9de76634-b251-4bdd-805d-5070367b7dc9 6b6a142e029fa48832df21f540d3509a hg19 Primary Tumor C3L-01160-01 .high_cov bulk_DNA BULK_NkkyJMp Duplicate item: PDA Pilot - bulk-derived DNA +C3L-01160.WXS.T.CORE_ERRmwz0.core.high_cov C3L-01160 PDA WXS tumor CPT0170600018 CPT0170600018.WholeExome.RP-1303.bam 65639438807 BAM NA 3ad0348b-748f-4318-83ca-d3e13e2a42db 4e2044d8fb0a94391757a5f185fc32c5 hg19 Primary Tumor C3L-01160-01 .core.high_cov core_DNA CORE_ERRmwz0 Duplicate item: PDA Pilot - core-derived DNA +C3L-01160.WXS.T.CORE_ERRmwz0.hg38.core.high_cov C3L-01160 PDA WXS tumor CPT0170600018 a8c4506f-92ba-4202-9c7b-ad08ebfb3b64_wxs_gdc_realn.bam 91330545140 BAM NA b515de0e-fcee-4a88-85f6-29e4dc115ccc eb74f04693eb9011204a648f9a831134 hg38 Primary Tumor C3L-01160-01 .core.high_cov core_DNA CORE_ERRmwz0 Duplicate item: PDA Pilot - core-derived DNA C3L-01202.MethArray.Green.Tbm C3L-01202 AML Methylation Array tumor_bone_marrow CPT0165960002 203561450027_R02C01_Grn.idat 13676221 IDAT Green 62175ef4-cfcd-4364-8e2c-37184338e00b 81fc5e9bc94d063007e4d4d5418b5cd8 NA Primary Blood Derived Cancer - Bone Marrow C3L-01202-54 C3L-01202.MethArray.Red.Tbm C3L-01202 AML Methylation Array tumor_bone_marrow CPT0165960002 203561450027_R02C01_Red.idat 13676221 IDAT Red c3f19b2b-2f81-4cc7-9858-c6497256b3b5 e0fb1f3bd9170c56cc3c1eef06cb84e1 NA Primary Blood Derived Cancer - Bone Marrow C3L-01202-54 C3L-01202.miRNA-Seq.Tbm C3L-01202 AML miRNA-Seq tumor_bone_marrow CPT0165970002 190508_UNC31-K00269_0215_BH7FYKBBXY_GTGGCC_S20_L001_R1_001.unaln.bam 178549955 BAM NA e4e9be38-fe77-43fd-b134-d38b87ee7fae 006034522f39f43e180a70fff60bef3b NA Primary Blood Derived Cancer - Bone Marrow C3L-01202-55 @@ -5632,9 +5634,9 @@ C3L-01284.WXS.N.hg38 C3L-01284 UCEC WXS blood_normal CPT0080140002 3d32ea57-7403 C3L-01284.WXS.T C3L-01284 UCEC WXS tumor CPT0079570009 CPT0079570009.WholeExome.RP-1303.bam 31950310271 BAM NA b360a00e-03b6-4536-96f8-1720130cc83b dc8e4038a47bdb78214ad08561ea74e7 hg19 Primary Tumor C3L-01284-02 C3L-01284.WXS.T.hg38 C3L-01284 UCEC WXS tumor CPT0079570009 f36e8c4a-0fc4-4b27-9629-d4838f7ba815_gdc_realn.bam 43317132193 BAM NA c5047b0d-9e91-41d3-bef5-ba35d086456d e6377a02e834af27ad4184e96fa63719 hg38 Primary Tumor C3L-01284-02 C3L-01285.MethArray.Green.A C3L-01285 LSCC Methylation Array tissue_normal CPT0087210006 203219670106_R02C01_Grn.idat 13676241 IDAT Green 484d19ae-e7cf-4748-a344-c3fe37f5a647 9929bc792e4080d37c3fb66079cac973 NA Solid Tissue Normal C3L-01285-06 -C3L-01285.MethArray.Green.T C3L-01285 LSCC Methylation Array tumor CPT0087190009 203219720203_R06C01_Grn.idat 13676221 IDAT Green 22ed4990-0f17-4b9b-85fe-1058026ad5c7 7658406412d9bf25d3fdb12d0ce8cd47 NA Primary Tumor C3L-01285-02 +C3L-01285.MethArray.Green.T.ADNA_roMl92 C3L-01285 LSCC Methylation Array tumor CPT0087190009 203219720203_R06C01_Grn.idat 13676221 IDAT Green 22ed4990-0f17-4b9b-85fe-1058026ad5c7 7658406412d9bf25d3fdb12d0ce8cd47 NA Primary Tumor C3L-01285-02 additional_DNA ADNA_roMl92 Duplicate item: Additional DNA requested C3L-01285.MethArray.Red.A C3L-01285 LSCC Methylation Array tissue_normal CPT0087210006 203219670106_R02C01_Red.idat 13676241 IDAT Red ad8b17b9-ed6e-4faa-90de-499605c390ee 371a6f8c68d882e59c4e38b4a86ba493 NA Solid Tissue Normal C3L-01285-06 -C3L-01285.MethArray.Red.T C3L-01285 LSCC Methylation Array tumor CPT0087190009 203219720203_R06C01_Red.idat 13676221 IDAT Red f3861979-fe9e-4ff2-892a-192fc5fdb2f9 21a8f7d1f8bb8311651d9b9a71657157 NA Primary Tumor C3L-01285-02 +C3L-01285.MethArray.Red.T.ADNA_roMl92 C3L-01285 LSCC Methylation Array tumor CPT0087190009 203219720203_R06C01_Red.idat 13676221 IDAT Red f3861979-fe9e-4ff2-892a-192fc5fdb2f9 21a8f7d1f8bb8311651d9b9a71657157 NA Primary Tumor C3L-01285-02 additional_DNA ADNA_roMl92 Duplicate item: Additional DNA requested C3L-01285.miRNA-Seq.A C3L-01285 LSCC miRNA-Seq tissue_normal CPT0087210009 181113_UNC31-K00269_0164_AH23NNBBXY_GTGGCC_S44_L006_R1_001.unaln.bam 234051497 BAM NA c04dd017-f07b-4d8b-b0e9-bf4e614c7ed9 9d7a002f3164bcf65b9690818a647f6a NA Solid Tissue Normal C3L-01285-06 C3L-01285.miRNA-Seq.A.hg38 C3L-01285 LSCC miRNA-Seq tissue_normal CPT0087210009 ba7e3a8d-cdfe-4931-94bb-c511097ad500_mirnaseq_gdc_realn.bam 263692028 BAM NA 58f9f58d-8859-4ee0-9295-a2042a127f1c 1865177a46e1aaa2757d64d373062789 hg38 Solid Tissue Normal C3L-01285-06 C3L-01285.miRNA-Seq.T C3L-01285 LSCC miRNA-Seq tumor CPT0087190006 180724_UNC32-K00270_0106_BHWK3MBBXX_CCGTCC_S38_L008_R1_001.unaln.bam 225495030 BAM NA 2cd86fa8-c2ec-4f82-b51a-bf56525aaff9 4ef2d6f6589fdff19f8e29bab3780628 NA Primary Tumor C3L-01285-02 @@ -5653,14 +5655,14 @@ C3L-01285.WGS.A C3L-01285 LSCC WGS tissue_normal CPT0087210006 CPT0087210006.Who C3L-01285.WGS.A.hg38 C3L-01285 LSCC WGS tissue_normal CPT0087210006 68478f98-036d-4812-9b6d-a8a850925cb3_wgs_gdc_realn.bam 87580693686 BAM NA 8cb38e1a-2a6d-43f1-92d4-0f101237408f 1c9aaad48bc05e706216bf202d4aadc2 hg38 Solid Tissue Normal C3L-01285-06 C3L-01285.WGS.N C3L-01285 LSCC WGS blood_normal CPT0087480002 CPT0087480002.WholeGenome.RP-1303.bam 68319294486 BAM NA 05bc5d98-4031-43df-b125-c3d66da4c6de e172062cb9d41b3305212cad9af17ce1 hg19 Blood Derived Normal C3L-01285-31 C3L-01285.WGS.N.hg38 C3L-01285 LSCC WGS blood_normal CPT0087480002 e704b262-5c0a-46f1-bdb2-463b4fe83c1a_wgs_gdc_realn.bam 100210891212 BAM NA f52e8430-6879-4a01-b417-9f9221970f98 05d2d3adb5691e5c9a6cd5bcfe486307 hg38 Blood Derived Normal C3L-01285-31 -C3L-01285.WGS.T C3L-01285 LSCC WGS tumor CPT0087190009 CPT0087190009.WholeGenome.RP-1303.bam 56749005869 BAM NA e3ce3d5c-db6b-4b43-9de6-f5dd8f63b249 754a03006cecd35177cf7c2e35967cc2 hg19 Primary Tumor C3L-01285-02 -C3L-01285.WGS.T.hg38 C3L-01285 LSCC WGS tumor CPT0087190009 09f170eb-d0fd-4f2c-818f-20bdfa042fb6_wgs_gdc_realn.bam 83723210431 BAM NA 86676d44-42fe-4224-b835-65d8597dd17f c6f05f99b444e512814ce0ffad402391 hg38 Primary Tumor C3L-01285-02 +C3L-01285.WGS.T.ADNA_roMl92 C3L-01285 LSCC WGS tumor CPT0087190009 CPT0087190009.WholeGenome.RP-1303.bam 56749005869 BAM NA e3ce3d5c-db6b-4b43-9de6-f5dd8f63b249 754a03006cecd35177cf7c2e35967cc2 hg19 Primary Tumor C3L-01285-02 additional_DNA ADNA_roMl92 Duplicate item: Additional DNA requested +C3L-01285.WGS.T.ADNA_roMl92.hg38 C3L-01285 LSCC WGS tumor CPT0087190009 09f170eb-d0fd-4f2c-818f-20bdfa042fb6_wgs_gdc_realn.bam 83723210431 BAM NA 86676d44-42fe-4224-b835-65d8597dd17f c6f05f99b444e512814ce0ffad402391 hg38 Primary Tumor C3L-01285-02 additional_DNA ADNA_roMl92 Duplicate item: Additional DNA requested C3L-01285.WXS.A C3L-01285 LSCC WXS tissue_normal CPT0087210006 CPT0087210006.WholeExome.RP-1303.bam 37894290150 BAM NA 0963b06c-23c2-4249-9bdf-40d806fd19e9 d85c4ed1c1383785d516c4350b163045 hg19 Solid Tissue Normal C3L-01285-06 C3L-01285.WXS.A.hg38 C3L-01285 LSCC WXS tissue_normal CPT0087210006 68478f98-036d-4812-9b6d-a8a850925cb3_wxs_gdc_realn.bam 49934861081 BAM NA 84c740d9-f1dc-4b7d-91a1-010e2aa16846 e40f3cdee528e612cc1cbaf8c6b29f0b hg38 Solid Tissue Normal C3L-01285-06 C3L-01285.WXS.N C3L-01285 LSCC WXS blood_normal CPT0087480002 CPT0087480002.WholeExome.RP-1303.bam 27836285935 BAM NA 795cbd55-5fda-4e77-8702-d3920da20c1d b33bab09f4e0dc17390fa112eceb5f51 hg19 Blood Derived Normal C3L-01285-31 C3L-01285.WXS.N.hg38 C3L-01285 LSCC WXS blood_normal CPT0087480002 e704b262-5c0a-46f1-bdb2-463b4fe83c1a_wxs_gdc_realn.bam 38641817752 BAM NA 425b6b9a-af16-45d3-995d-790e291ca478 4a9d765443cf73073029e5f7d8a9d2a6 hg38 Blood Derived Normal C3L-01285-31 -C3L-01285.WXS.T C3L-01285 LSCC WXS tumor CPT0087190009 CPT0087190009.WholeExome.RP-1303.bam 31154542517 BAM NA 9d8fdc95-e214-4ede-8da1-f4785ee6ec91 8ba4ff6a3c7e9b568ee41d000bd7310a hg19 Primary Tumor C3L-01285-02 -C3L-01285.WXS.T.hg38 C3L-01285 LSCC WXS tumor CPT0087190009 09f170eb-d0fd-4f2c-818f-20bdfa042fb6_wxs_gdc_realn.bam 42998316223 BAM NA 6d6e2b9d-4d1c-42b4-a6cb-756b8d0ca803 be5dc34c60fce9b5e95de68c3136e91f hg38 Primary Tumor C3L-01285-02 +C3L-01285.WXS.T.ADNA_roMl92 C3L-01285 LSCC WXS tumor CPT0087190009 CPT0087190009.WholeExome.RP-1303.bam 31154542517 BAM NA 9d8fdc95-e214-4ede-8da1-f4785ee6ec91 8ba4ff6a3c7e9b568ee41d000bd7310a hg19 Primary Tumor C3L-01285-02 additional_DNA ADNA_roMl92 Duplicate item: Additional DNA requested +C3L-01285.WXS.T.ADNA_roMl92.hg38 C3L-01285 LSCC WXS tumor CPT0087190009 09f170eb-d0fd-4f2c-818f-20bdfa042fb6_wxs_gdc_realn.bam 42998316223 BAM NA 6d6e2b9d-4d1c-42b4-a6cb-756b8d0ca803 be5dc34c60fce9b5e95de68c3136e91f hg38 Primary Tumor C3L-01285-02 additional_DNA ADNA_roMl92 Duplicate item: Additional DNA requested C3L-01286.MethArray.Green.A C3L-01286 CCRCC Methylation Array tissue_normal CPT0086970009 203027390029_R08C01_Grn.idat 13676246 IDAT Green df2ff300-0973-4f0d-a656-9e7b855d5186 64f4d08a6330af43260e99f87aa4a2fc NA Solid Tissue Normal C3L-01286-06 C3L-01286.MethArray.Green.T C3L-01286 CCRCC Methylation Array tumor CPT0086950009 202176300001_R08C01_Grn.idat 13676216 IDAT Green 0a817c99-ca6f-4012-9afa-f115ff0859e4 71f5e7158c7d9c2d63769e54a60cba16 NA Primary Tumor C3L-01286-02 C3L-01286.MethArray.Green.T.HET_roYL7L C3L-01286 CCRCC Methylation Array tumor CPT0086960009 204372030085_R01C01_Grn.idat 13677880 IDAT Green 58be5587-c8b0-4d17-9b24-14151a8f1678 754c0ead494da4e11eec0e2a65c02e6a NA Primary Tumor C3L-01286-03 heterogeneity HET_roYL7L Duplicate item: CCRCC Tumor heterogeneity study aliquot @@ -6102,8 +6104,8 @@ C3L-01355.WXS.N C3L-01355 UCEC WXS blood_normal CPT0081810002 CPT0081810002.Whol C3L-01355.WXS.N.hg38 C3L-01355 UCEC WXS blood_normal CPT0081810002 38f93d50-f23b-4b2c-9add-b7a8b225357b_gdc_realn.bam 42743830072 BAM NA ac192f91-2c4f-4a62-a243-1a6c2e120380 70b4f79537dc07d03069a509744bbc11 hg38 Blood Derived Normal C3L-01355-31 C3L-01355.WXS.T C3L-01355 UCEC WXS tumor CPT0083580006 CPT0083580006.WholeExome.RP-1303.bam 30346724366 BAM NA fb594274-f82d-42c0-b1ad-a23f14319a36 70beaed118534893aa702ec5827a50d1 hg19 Primary Tumor C3L-01355-02 C3L-01355.WXS.T.hg38 C3L-01355 UCEC WXS tumor CPT0083580006 b11dd0cb-f42c-4c2e-87af-aedc2e5f8272_gdc_realn.bam 40577707227 BAM NA 565ab56b-fe08-49b2-92cd-8666c15dc61f 229dd64b9388ec51059c6371b9924f37 hg38 Primary Tumor C3L-01355-02 -C3L-01453.MethArray.Green.T C3L-01453 PDA Methylation Array tumor CPT0108400009 202234370119_R05C01_Grn.idat 13676231 IDAT Green 1761f611-bae6-46e7-b78a-08d3970f8efd ae863cf0469b9fa40261f6fc5a0d2566 NA Primary Tumor C3L-01453-03 -C3L-01453.MethArray.Red.T C3L-01453 PDA Methylation Array tumor CPT0108400009 202234370119_R05C01_Red.idat 13676231 IDAT Red bfad5e5e-07eb-4e58-a472-2b436013f27e 3afcb931fcc347854e44236ce9f27e7e NA Primary Tumor C3L-01453-03 +C3L-01453.MethArray.Green.T.DEEP_rxJo3W C3L-01453 PDA Methylation Array tumor CPT0108400009 202234370119_R05C01_Grn.idat 13676231 IDAT Green 1761f611-bae6-46e7-b78a-08d3970f8efd ae863cf0469b9fa40261f6fc5a0d2566 NA Primary Tumor C3L-01453-03 deep_sequencing DEEP_rxJo3W Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01453.MethArray.Red.T.DEEP_rxJo3W C3L-01453 PDA Methylation Array tumor CPT0108400009 202234370119_R05C01_Red.idat 13676231 IDAT Red bfad5e5e-07eb-4e58-a472-2b436013f27e 3afcb931fcc347854e44236ce9f27e7e NA Primary Tumor C3L-01453-03 deep_sequencing DEEP_rxJo3W Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01453.miRNA-Seq.A C3L-01453 PDA miRNA-Seq tissue_normal CPT0108410009 181108_UNC31-K00269_0162_AH255GBBXY_CTATAC_S15_L001_R1_001.unaln.bam 233520484 BAM NA d861a4f5-55af-497b-a82b-8928194cc44f 99063b49c1358df3da3d35baa8227e1f NA Solid Tissue Normal C3L-01453-04 C3L-01453.miRNA-Seq.A.hg38 C3L-01453 PDA miRNA-Seq tissue_normal CPT0108410009 bea7c68d-6582-42af-a2cc-8943e5c8f07b_mirnaseq_gdc_realn.bam 257514526 BAM NA 5765fa1e-1ca3-4ef1-bfb1-d5f9fd22d598 c619cf656fd624d108bce264ef0e5c26 hg38 Solid Tissue Normal C3L-01453-04 C3L-01453.miRNA-Seq.T C3L-01453 PDA miRNA-Seq tumor CPT0108400006 181119_UNC31-K00269_0165_AH27WCBBXY_AGTCAA_S37_L003_R1_001.unaln.bam 268638469 BAM NA 32a4c03f-0e98-441e-ab8e-95f0f410cdd7 a196001647454d477c3461ecf6c0546f NA Primary Tumor C3L-01453-03 @@ -6123,14 +6125,14 @@ C3L-01453.WGS.A C3L-01453 PDA WGS tissue_normal CPT0108410006 CPT0108410006.Whol C3L-01453.WGS.A.hg38 C3L-01453 PDA WGS tissue_normal CPT0108410006 b5c2ce79-efc4-4838-a64b-d10699c59075_wgs_gdc_realn.bam 96938177064 BAM NA 2f57bd77-2dce-4c3f-8eb4-b391d8f07345 df0e40f061e780cc6269c13291624bd1 hg38 Solid Tissue Normal C3L-01453-04 C3L-01453.WGS.N C3L-01453 PDA WGS blood_normal CPT0108330002 CPT0108330002.WholeGenome.RP-1303.bam 73130536542 BAM NA 67e40708-f6bb-4afd-b712-e4fcbb78567e fb20214de19c9b0464e515db7c9705b1 hg19 Blood Derived Normal C3L-01453-31 C3L-01453.WGS.N.hg38 C3L-01453 PDA WGS blood_normal CPT0108330002 dc6ce414-625c-4290-b5c9-b46f72582478_wgs_gdc_realn.bam 107577882836 BAM NA cd2f26c3-8c7f-4ac1-aa94-af6b31ef421d 841206d8299c2adb35cf2e05772fa6dc hg38 Blood Derived Normal C3L-01453-31 -C3L-01453.WGS.T C3L-01453 PDA WGS tumor CPT0108400009 CPT0108400009.WholeGenome.RP-1303.bam 68032391689 BAM NA fd9a1805-9250-4504-9779-f049675ed072 d68f211967ff6ba8fe3b05cc761f4a86 hg19 Primary Tumor C3L-01453-03 -C3L-01453.WGS.T.hg38 C3L-01453 PDA WGS tumor CPT0108400009 4494960c-3f83-48f8-8cd8-265f77a5aaa6_wgs_gdc_realn.bam 99095446357 BAM NA 18f0a656-615a-417e-92b1-953fbfd4afd6 70ff4a1b09a4ee957488980726b40440 hg38 Primary Tumor C3L-01453-03 +C3L-01453.WGS.T.DEEP_rxJo3W C3L-01453 PDA WGS tumor CPT0108400009 CPT0108400009.WholeGenome.RP-1303.bam 68032391689 BAM NA fd9a1805-9250-4504-9779-f049675ed072 d68f211967ff6ba8fe3b05cc761f4a86 hg19 Primary Tumor C3L-01453-03 deep_sequencing DEEP_rxJo3W Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01453.WGS.T.DEEP_rxJo3W.hg38 C3L-01453 PDA WGS tumor CPT0108400009 4494960c-3f83-48f8-8cd8-265f77a5aaa6_wgs_gdc_realn.bam 99095446357 BAM NA 18f0a656-615a-417e-92b1-953fbfd4afd6 70ff4a1b09a4ee957488980726b40440 hg38 Primary Tumor C3L-01453-03 deep_sequencing DEEP_rxJo3W Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01453.WXS.A C3L-01453 PDA WXS tissue_normal CPT0108410006 CPT0108410006.WholeExome.RP-1303.bam 27503878831 BAM NA 98532fec-93e1-4496-92cc-7fcb2d2a5170 e21a29220bbffab9ec3d583b6cc1d80e hg19 Solid Tissue Normal C3L-01453-04 C3L-01453.WXS.A.hg38 C3L-01453 PDA WXS tissue_normal CPT0108410006 b5c2ce79-efc4-4838-a64b-d10699c59075_wxs_gdc_realn.bam 36755861699 BAM NA caeb87d8-96b7-4a47-9065-1b68e6943418 b88d596d388c1c8ba0f984ff1cf84d77 hg38 Solid Tissue Normal C3L-01453-04 C3L-01453.WXS.N C3L-01453 PDA WXS blood_normal CPT0108330002 CPT0108330002.WholeExome.RP-1303.bam 35080355508 BAM NA 0dee4e23-e89c-4eb8-916d-c9d43276bb16 c3a7549f9f7c362b48b99b3be94e3de2 hg19 Blood Derived Normal C3L-01453-31 C3L-01453.WXS.N.hg38 C3L-01453 PDA WXS blood_normal CPT0108330002 dc6ce414-625c-4290-b5c9-b46f72582478_wxs_gdc_realn.bam 47787570422 BAM NA 587a23b3-2719-4158-9561-88037fd381a2 48c714ab125ed473acf2356fefb77182 hg38 Blood Derived Normal C3L-01453-31 -C3L-01453.WXS.T C3L-01453 PDA WXS tumor CPT0108400009 CPT0108400009.WholeExome.RP-1303.bam 30673538693 BAM NA 3d2bb53e-b0a8-497c-ac5b-0ae1e8f14e77 3528aac2a1d97b58067a2ba89e396db7 hg19 Primary Tumor C3L-01453-03 -C3L-01453.WXS.T.hg38 C3L-01453 PDA WXS tumor CPT0108400009 4494960c-3f83-48f8-8cd8-265f77a5aaa6_wxs_gdc_realn.bam 41048585017 BAM NA 42c0a07c-097d-46be-a3e7-185f8e91c8a9 32675fbd59876b4b6d7a22524ef746d5 hg38 Primary Tumor C3L-01453-03 +C3L-01453.WXS.T.DEEP_rxJo3W C3L-01453 PDA WXS tumor CPT0108400009 CPT0108400009.WholeExome.RP-1303.bam 30673538693 BAM NA 3d2bb53e-b0a8-497c-ac5b-0ae1e8f14e77 3528aac2a1d97b58067a2ba89e396db7 hg19 Primary Tumor C3L-01453-03 deep_sequencing DEEP_rxJo3W Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01453.WXS.T.DEEP_rxJo3W.hg38 C3L-01453 PDA WXS tumor CPT0108400009 4494960c-3f83-48f8-8cd8-265f77a5aaa6_wxs_gdc_realn.bam 41048585017 BAM NA 42c0a07c-097d-46be-a3e7-185f8e91c8a9 32675fbd59876b4b6d7a22524ef746d5 hg38 Primary Tumor C3L-01453-03 deep_sequencing DEEP_rxJo3W Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01453.WXS.T.hg38.high_cov C3L-01453 PDA WXS tumor CPT0108400009_1 9b68ed20-1ebc-417a-acb0-2c684a84c39c_wxs_gdc_realn.bam 76881888207 BAM NA f15f08bf-e6a2-41f6-bafe-76f50b389ef6 bb508e58924894a2064b0e467418f5bd hg38 Primary Tumor C3L-01453-03 .high_cov C3L-01453.WXS.T.high_cov C3L-01453 PDA WXS tumor CPT0108400009_1 CPT0108400009_1.WholeExome.RP-1303.bam 57007759908 BAM NA f24036e7-4034-429f-a129-bbaaeded4b41 b8bf55cdf5c105e2850e20760b6833f2 hg19 Primary Tumor C3L-01453-03 .high_cov C3L-01455.MethArray.Green.A C3L-01455 LSCC Methylation Array tissue_normal CPT0108600006 203220070157_R01C01_Grn.idat 13676216 IDAT Green 0c6af48c-d42d-421d-9464-f9042040a6a4 bd023000b4d7131002d232944cab797a NA Solid Tissue Normal C3L-01455-05 @@ -6335,9 +6337,9 @@ C3L-01560.WXS.N.hg38 C3L-01560 CCRCC WXS blood_normal CPT0086720001 91858a3e-1ed C3L-01560.WXS.T C3L-01560 CCRCC WXS tumor CPT0086030009 CPT0086030009.WholeExome.RP-1303.bam 30606178111 BAM NA dc50a2bc-2a57-410e-b5bc-2be5143c1640 8fc56c0c135ec6a94a7ecac294b7a574 hg19 Primary Tumor C3L-01560-01 C3L-01560.WXS.T.hg38 C3L-01560 CCRCC WXS tumor CPT0086030009 6fb2d180-e432-450f-81c9-2905ce7fc8af_gdc_realn.bam 42239001120 BAM NA 9300a20b-9b5b-4882-b110-4589f417a06d 723ace31f701785de5c40f31cd43008b hg38 Primary Tumor C3L-01560-01 C3L-01598.MethArray.Green.A C3L-01598 PDA Methylation Array tissue_normal CPT0091680006 203561620091_R08C01_Grn.idat 13676211 IDAT Green 5b8f2849-6a6f-42e0-89fe-443a53fcd1ce af6b5bf13476b062951ae16ab36f9efc NA Solid Tissue Normal C3L-01598-06 -C3L-01598.MethArray.Green.T C3L-01598 PDA Methylation Array tumor CPT0091660009 202234370091_R04C01_Grn.idat 13676231 IDAT Green 27baaf53-cf76-46d1-b6ce-7b3ad19f0448 9386dae645bd95b14aafe08342aa0abb NA Primary Tumor C3L-01598-02 +C3L-01598.MethArray.Green.T.DEEP_rlvk0k C3L-01598 PDA Methylation Array tumor CPT0091660009 202234370091_R04C01_Grn.idat 13676231 IDAT Green 27baaf53-cf76-46d1-b6ce-7b3ad19f0448 9386dae645bd95b14aafe08342aa0abb NA Primary Tumor C3L-01598-02 deep_sequencing DEEP_rlvk0k Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01598.MethArray.Red.A C3L-01598 PDA Methylation Array tissue_normal CPT0091680006 203561620091_R08C01_Red.idat 13676211 IDAT Red 6af79e4b-983a-4cc3-bf30-b6a044b297db 30c536430e9692fca4a91329585d1a2f NA Solid Tissue Normal C3L-01598-06 -C3L-01598.MethArray.Red.T C3L-01598 PDA Methylation Array tumor CPT0091660009 202234370091_R04C01_Red.idat 13676231 IDAT Red 287d8fca-94a2-46f4-acac-8cbb4939ba11 4000d8fb8e54c01217bea32d0e9e6ea6 NA Primary Tumor C3L-01598-02 +C3L-01598.MethArray.Red.T.DEEP_rlvk0k C3L-01598 PDA Methylation Array tumor CPT0091660009 202234370091_R04C01_Red.idat 13676231 IDAT Red 287d8fca-94a2-46f4-acac-8cbb4939ba11 4000d8fb8e54c01217bea32d0e9e6ea6 NA Primary Tumor C3L-01598-02 deep_sequencing DEEP_rlvk0k Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01598.miRNA-Seq.T C3L-01598 PDA miRNA-Seq tumor CPT0091660006 180828_UNC32-K00270_0112_AHWTLNBBXX_ACTTGA_S16_L006_R1_001.unaln.bam 230053299 BAM NA ccae5475-86c2-4a4a-9ba5-6d471b414810 9ecafc8e6218277a9df29e836b6845f7 NA Primary Tumor C3L-01598-02 C3L-01598.miRNA-Seq.T.hg38 C3L-01598 PDA miRNA-Seq tumor CPT0091660006 96fdce6d-82ff-4882-bd92-2156325ae4eb_mirnaseq_gdc_realn.bam 259370167 BAM NA a0f984c1-b0eb-4061-b328-97194a630664 b9a2591cbb13d7fe85a1b3db3d3eecd2 hg38 Primary Tumor C3L-01598-02 C3L-01598.RNA-Seq.chimeric.T.hg38 C3L-01598 PDA RNA-Seq tumor CPT0091660006 76820715-bd07-43e6-8563-c8878332d448.rna_seq.chimeric.gdc_realn.bam 43178230 BAM chimeric 9ce20382-987d-4a2d-8454-0ba78fe94840 8380b01682830bd6697378ad2a863217 hg38 Primary Tumor C3L-01598-02 @@ -6350,14 +6352,14 @@ C3L-01598.WGS.A C3L-01598 PDA WGS tissue_normal CPT0091680006 CPT0091680006.Whol C3L-01598.WGS.A.hg38 C3L-01598 PDA WGS tissue_normal CPT0091680006 fd5ef7cc-8d76-4619-bb47-38e0b0cc00f7_wgs_gdc_realn.bam 85420353269 BAM NA a9641e05-ac5c-4ec4-9a45-6ec957ad6171 8d2d2eb5b4634a6301345306428e641e hg38 Solid Tissue Normal C3L-01598-06 C3L-01598.WGS.N C3L-01598 PDA WGS blood_normal CPT0093640002 CPT0093640002.WholeGenome.RP-1303.bam 57975403250 BAM NA 9ea06234-c50a-42ce-9586-195deb3249f7 190385afa2616399fb33f0bcff1eb97c hg19 Blood Derived Normal C3L-01598-31 C3L-01598.WGS.N.hg38 C3L-01598 PDA WGS blood_normal CPT0093640002 95e7a2ce-67b2-45c6-b20e-d9ae349d508a_wgs_gdc_realn.bam 84849812961 BAM NA b159c90f-e348-4daa-a4cb-180d7ef7638b 339e94366a207b5d1c9bce4ac6ae0c46 hg38 Blood Derived Normal C3L-01598-31 -C3L-01598.WGS.T C3L-01598 PDA WGS tumor CPT0091660009 CPT0091660009.WholeGenome.RP-1303.bam 62518760424 BAM NA d4d6ca7f-9541-431a-9cd3-3eb3d6708ff8 7a487acd0878480351aa16846666e64a hg19 Primary Tumor C3L-01598-02 -C3L-01598.WGS.T.hg38 C3L-01598 PDA WGS tumor CPT0091660009 bac77f65-6e9c-4500-aebb-e5a01555c606_wgs_gdc_realn.bam 90821592426 BAM NA 8fd1e997-179f-45e1-9fd4-6b0568213065 5e3dd3e988891a85813be9609ce6039b hg38 Primary Tumor C3L-01598-02 +C3L-01598.WGS.T.DEEP_rlvk0k C3L-01598 PDA WGS tumor CPT0091660009 CPT0091660009.WholeGenome.RP-1303.bam 62518760424 BAM NA d4d6ca7f-9541-431a-9cd3-3eb3d6708ff8 7a487acd0878480351aa16846666e64a hg19 Primary Tumor C3L-01598-02 deep_sequencing DEEP_rlvk0k Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01598.WGS.T.DEEP_rlvk0k.hg38 C3L-01598 PDA WGS tumor CPT0091660009 bac77f65-6e9c-4500-aebb-e5a01555c606_wgs_gdc_realn.bam 90821592426 BAM NA 8fd1e997-179f-45e1-9fd4-6b0568213065 5e3dd3e988891a85813be9609ce6039b hg38 Primary Tumor C3L-01598-02 deep_sequencing DEEP_rlvk0k Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01598.WXS.A C3L-01598 PDA WXS tissue_normal CPT0091680006 CPT0091680006.WholeExome.RP-1303.bam 28005938891 BAM NA 26f794f8-6e06-4ff5-8048-2fd07c28a0ee c2bbdacbadb1c86d1f22d807246e5ebb hg19 Solid Tissue Normal C3L-01598-06 C3L-01598.WXS.A.hg38 C3L-01598 PDA WXS tissue_normal CPT0091680006 fd5ef7cc-8d76-4619-bb47-38e0b0cc00f7_wxs_gdc_realn.bam 37969740605 BAM NA 24e8e247-b58d-4b2d-ae7c-8155b7f22c85 77e96264e6c98ef70f77f45a7fa3ba3f hg38 Solid Tissue Normal C3L-01598-06 C3L-01598.WXS.N C3L-01598 PDA WXS blood_normal CPT0093640002 CPT0093640002.WholeExome.RP-1303.bam 42428952772 BAM NA a068c125-251e-490e-bf38-a426bb839c39 7b0ed7af37b64f91a9cbd8998c350b25 hg19 Blood Derived Normal C3L-01598-31 C3L-01598.WXS.N.hg38 C3L-01598 PDA WXS blood_normal CPT0093640002 95e7a2ce-67b2-45c6-b20e-d9ae349d508a_wxs_gdc_realn.bam 58217784254 BAM NA a90fde09-f8af-4195-b625-30d504f8d1e2 a654d0f92d8191b18598d7e2f27df10b hg38 Blood Derived Normal C3L-01598-31 -C3L-01598.WXS.T C3L-01598 PDA WXS tumor CPT0091660009 CPT0091660009.WholeExome.RP-1303.bam 42562720654 BAM NA c4d5e807-e4e0-43f2-8c32-de2e48cffa13 955ece3c35f222b8eec518aaa94e0dda hg19 Primary Tumor C3L-01598-02 -C3L-01598.WXS.T.hg38 C3L-01598 PDA WXS tumor CPT0091660009 bac77f65-6e9c-4500-aebb-e5a01555c606_wxs_gdc_realn.bam 58520503197 BAM NA e7220b9c-9aa8-42e8-8edc-4a01172ae221 4d5a1fd85f64281e7d8990ee73ee794c hg38 Primary Tumor C3L-01598-02 +C3L-01598.WXS.T.DEEP_rlvk0k C3L-01598 PDA WXS tumor CPT0091660009 CPT0091660009.WholeExome.RP-1303.bam 42562720654 BAM NA c4d5e807-e4e0-43f2-8c32-de2e48cffa13 955ece3c35f222b8eec518aaa94e0dda hg19 Primary Tumor C3L-01598-02 deep_sequencing DEEP_rlvk0k Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01598.WXS.T.DEEP_rlvk0k.hg38 C3L-01598 PDA WXS tumor CPT0091660009 bac77f65-6e9c-4500-aebb-e5a01555c606_wxs_gdc_realn.bam 58520503197 BAM NA e7220b9c-9aa8-42e8-8edc-4a01172ae221 4d5a1fd85f64281e7d8990ee73ee794c hg38 Primary Tumor C3L-01598-02 deep_sequencing DEEP_rlvk0k Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01598.WXS.T.hg38.high_cov C3L-01598 PDA WXS tumor CPT0091660009_1 15814773-2f11-40f1-a6fb-d14270400e3a_wxs_gdc_realn.bam 94515099740 BAM NA a8c21a6b-9229-475c-a9a3-6497efa02c38 7c72ee72821625863bbc7fd2482ecf6a hg38 Primary Tumor C3L-01598-02 .high_cov C3L-01598.WXS.T.high_cov C3L-01598 PDA WXS tumor CPT0091660009_1 CPT0091660009_1.WholeExome.RP-1303.bam 69160189378 BAM NA 414e19b6-b45b-470d-bed4-be5259166039 2a70655ea6b6e7346419c8eb9cb09562 hg19 Primary Tumor C3L-01598-02 .high_cov C3L-01599.MethArray.Green.T C3L-01599 UCEC Methylation Array tumor CPT0087260009 202184900148_R03C01_Grn.idat 13676246 IDAT Green 7fa67a9f-76f0-414e-a58b-ce8624051be7 c65184e5cb4ef4b3c7439d31cee97441 NA Primary Tumor C3L-01599-02 @@ -6617,9 +6619,9 @@ C3L-01633.WXS.N.hg38 C3L-01633 UCEC WXS blood_normal CPT0093690002 642bdd21-0fca C3L-01633.WXS.T C3L-01633 UCEC WXS tumor CPT0091910009 CPT0091910009.WholeExome.RP-1303.bam 32380677009 BAM NA df3b907c-8c19-43f3-b7b3-fccd15951299 82f47df717a0a12b6c12c756eb267082 hg19 Primary Tumor C3L-01633-02 C3L-01633.WXS.T.hg38 C3L-01633 UCEC WXS tumor CPT0091910009 df0ba400-4c87-462a-857f-72314f913d7d_wxs_gdc_realn.bam 44945424256 BAM NA 02568b9d-c100-4e27-8e6d-4a1d4094ed20 45e3747ba1a793c74dc5aaad33c30189 hg38 Primary Tumor C3L-01633-02 C3L-01637.MethArray.Green.A C3L-01637 PDA Methylation Array tissue_normal CPT0086210006 203561620072_R08C01_Grn.idat 13676226 IDAT Green cf076a2e-4db8-43ac-b0c1-ce742395b8f7 bbf7684c2352c14d54c0b44163a06946 NA Solid Tissue Normal C3L-01637-06 -C3L-01637.MethArray.Green.T C3L-01637 PDA Methylation Array tumor CPT0086190010 202234380094_R05C01_Grn.idat 13676246 IDAT Green 8ff5e44b-839b-46d9-b452-5282ac24a21b 376ef9fe429e0e667d1303f94c651409 NA Primary Tumor C3L-01637-02,C3L-01637-03 +C3L-01637.MethArray.Green.T.DEEP_vrKGyn C3L-01637 PDA Methylation Array tumor CPT0086190010 202234380094_R05C01_Grn.idat 13676246 IDAT Green 8ff5e44b-839b-46d9-b452-5282ac24a21b 376ef9fe429e0e667d1303f94c651409 NA Primary Tumor C3L-01637-02,C3L-01637-03 deep_sequencing DEEP_vrKGyn Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01637.MethArray.Red.A C3L-01637 PDA Methylation Array tissue_normal CPT0086210006 203561620072_R08C01_Red.idat 13676226 IDAT Red b000d67f-53eb-4fcc-82c5-0c4f4686ebed 75efadc06cbeace0b0a8a99fd04cc33a NA Solid Tissue Normal C3L-01637-06 -C3L-01637.MethArray.Red.T C3L-01637 PDA Methylation Array tumor CPT0086190010 202234380094_R05C01_Red.idat 13676246 IDAT Red b04a5c58-6604-403c-b348-54885c8afa45 4af78a3c5d01e5680f2f84a1f7e1e847 NA Primary Tumor C3L-01637-02,C3L-01637-03 +C3L-01637.MethArray.Red.T.DEEP_vrKGyn C3L-01637 PDA Methylation Array tumor CPT0086190010 202234380094_R05C01_Red.idat 13676246 IDAT Red b04a5c58-6604-403c-b348-54885c8afa45 4af78a3c5d01e5680f2f84a1f7e1e847 NA Primary Tumor C3L-01637-02,C3L-01637-03 deep_sequencing DEEP_vrKGyn Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01637.miRNA-Seq.A C3L-01637 PDA miRNA-Seq tissue_normal CPT0086210009 181108_UNC31-K00269_0162_AH255GBBXY_CTAGCT_S14_L001_R1_001.unaln.bam 217868198 BAM NA 47daf1ae-4c2a-41af-b8a9-daf307b08a3c 7c8e3a671578d91bf4fbac3b673bd942 NA Solid Tissue Normal C3L-01637-06 C3L-01637.miRNA-Seq.A.hg38 C3L-01637 PDA miRNA-Seq tissue_normal CPT0086210009 783bd6ee-102c-4778-bb1e-b2af80b71dc5_mirnaseq_gdc_realn.bam 239574490 BAM NA 027f406d-df5b-4241-9b5f-daf329925572 46be579c36a9de2d12062a4e3e7a0915 hg38 Solid Tissue Normal C3L-01637-06 C3L-01637.miRNA-Seq.T C3L-01637 PDA miRNA-Seq tumor CPT0086190007 180724_UNC32-K00270_0106_BHWK3MBBXX_GGCTAC_S34_L008_R1_001.unaln.bam 297668846 BAM NA 5dde1548-8e04-4445-ad93-f60ef3bb2fbb 6f3d667b071d5f7e17a3f26e0213fa56 NA Primary Tumor C3L-01637-02,C3L-01637-03 @@ -6639,14 +6641,14 @@ C3L-01637.WGS.A C3L-01637 PDA WGS tissue_normal CPT0086210006 CPT0086210006.Whol C3L-01637.WGS.A.hg38 C3L-01637 PDA WGS tissue_normal CPT0086210006 c053a6a4-f6f4-4654-8983-0ce308df090c_wgs_gdc_realn.bam 90956173717 BAM NA 23feb2c6-7d75-4509-aabb-d2bc99004ba7 92515c125606958499be534884d98d38 hg38 Solid Tissue Normal C3L-01637-06 C3L-01637.WGS.N C3L-01637 PDA WGS blood_normal CPT0087390002 CPT0087390002.WholeGenome.RP-1303.bam 62112483282 BAM NA 09b55453-c647-4e15-90f4-bbb59cb97296 d9b914dcd85176f500e009542e1cef65 hg19 Blood Derived Normal C3L-01637-31 C3L-01637.WGS.N.hg38 C3L-01637 PDA WGS blood_normal CPT0087390002 c502c419-51a2-4235-a80b-213211cb1285_wgs_gdc_realn.bam 91268074583 BAM NA b0958b14-258a-42c8-9208-a0d1224b16b4 44ef7c1bf4c00830c996229b6f3d6b29 hg38 Blood Derived Normal C3L-01637-31 -C3L-01637.WGS.T C3L-01637 PDA WGS tumor CPT0086190010 CPT0086190010.WholeGenome.RP-1303.bam 54986970867 BAM NA 0d348c17-aa25-43f4-a56d-0847fb8d32b1 2040a34493dd0020ba16a4b59adcaf60 hg19 Primary Tumor C3L-01637-02,C3L-01637-03 -C3L-01637.WGS.T.hg38 C3L-01637 PDA WGS tumor CPT0086190010 5715552c-426e-4d4d-a0bf-9bcbe73be6bc_wgs_gdc_realn.bam 81281606863 BAM NA dff13367-5082-43de-a47b-b507d7245a80 a5d54b559d6a8696bfc4edbcf2443ebb hg38 Primary Tumor C3L-01637-02,C3L-01637-03 +C3L-01637.WGS.T.DEEP_vrKGyn C3L-01637 PDA WGS tumor CPT0086190010 CPT0086190010.WholeGenome.RP-1303.bam 54986970867 BAM NA 0d348c17-aa25-43f4-a56d-0847fb8d32b1 2040a34493dd0020ba16a4b59adcaf60 hg19 Primary Tumor C3L-01637-02,C3L-01637-03 deep_sequencing DEEP_vrKGyn Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01637.WGS.T.DEEP_vrKGyn.hg38 C3L-01637 PDA WGS tumor CPT0086190010 5715552c-426e-4d4d-a0bf-9bcbe73be6bc_wgs_gdc_realn.bam 81281606863 BAM NA dff13367-5082-43de-a47b-b507d7245a80 a5d54b559d6a8696bfc4edbcf2443ebb hg38 Primary Tumor C3L-01637-02,C3L-01637-03 deep_sequencing DEEP_vrKGyn Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01637.WXS.A C3L-01637 PDA WXS tissue_normal CPT0086210006 CPT0086210006.WholeExome.RP-1303.bam 24285591771 BAM NA 2fc93a01-1f6c-454e-a665-251af39833a9 9b07a2e624d43b31515c5fb6de0a1684 hg19 Solid Tissue Normal C3L-01637-06 C3L-01637.WXS.A.hg38 C3L-01637 PDA WXS tissue_normal CPT0086210006 c053a6a4-f6f4-4654-8983-0ce308df090c_wxs_gdc_realn.bam 33108672711 BAM NA 5d2c4008-b76c-41a9-870d-172ef5194bff 5cef185b99e3dec5cad02409f9faa7f9 hg38 Solid Tissue Normal C3L-01637-06 C3L-01637.WXS.N C3L-01637 PDA WXS blood_normal CPT0087390002 CPT0087390002.WholeExome.RP-1303.bam 35419211739 BAM NA a681fc62-53f4-4496-bb8a-7846e1a35f20 4c11b8634e2cc9902b0dafc26df58de8 hg19 Blood Derived Normal C3L-01637-31 C3L-01637.WXS.N.hg38 C3L-01637 PDA WXS blood_normal CPT0087390002 c502c419-51a2-4235-a80b-213211cb1285_wxs_gdc_realn.bam 48148385522 BAM NA 0b5b49f8-940f-4f67-bcdb-8f16a38ada10 92d0f4100ae7f7ce87a47286ccc2bd6d hg38 Blood Derived Normal C3L-01637-31 -C3L-01637.WXS.T C3L-01637 PDA WXS tumor CPT0086190010 CPT0086190010.WholeExome.RP-1303.bam 40757632012 BAM NA da92ef37-50af-4c1d-9734-a3fe9f73b4e0 d522b9400cbfb7a5887846f378b6d739 hg19 Primary Tumor C3L-01637-02,C3L-01637-03 -C3L-01637.WXS.T.hg38 C3L-01637 PDA WXS tumor CPT0086190010 5715552c-426e-4d4d-a0bf-9bcbe73be6bc_wxs_gdc_realn.bam 56222723082 BAM NA cd9336c1-3b80-4550-b90c-3f74778c936a 197111a62281522de45829fcfdd4483a hg38 Primary Tumor C3L-01637-02,C3L-01637-03 +C3L-01637.WXS.T.DEEP_vrKGyn C3L-01637 PDA WXS tumor CPT0086190010 CPT0086190010.WholeExome.RP-1303.bam 40757632012 BAM NA da92ef37-50af-4c1d-9734-a3fe9f73b4e0 d522b9400cbfb7a5887846f378b6d739 hg19 Primary Tumor C3L-01637-02,C3L-01637-03 deep_sequencing DEEP_vrKGyn Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01637.WXS.T.DEEP_vrKGyn.hg38 C3L-01637 PDA WXS tumor CPT0086190010 5715552c-426e-4d4d-a0bf-9bcbe73be6bc_wxs_gdc_realn.bam 56222723082 BAM NA cd9336c1-3b80-4550-b90c-3f74778c936a 197111a62281522de45829fcfdd4483a hg38 Primary Tumor C3L-01637-02,C3L-01637-03 deep_sequencing DEEP_vrKGyn Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01637.WXS.T.hg38.high_cov C3L-01637 PDA WXS tumor CPT0086190010_1 43df9f52-8514-4599-8ee0-ddf44db2324c_wxs_gdc_realn.bam 94491110315 BAM NA 14900b7d-0fc5-4480-a94d-a42ed86e0a01 0ac1a0fb40349aff836726630129939e hg38 Primary Tumor C3L-01637-03 .high_cov C3L-01637.WXS.T.high_cov C3L-01637 PDA WXS tumor CPT0086190010_1 CPT0086190010_1.WholeExome.RP-1303.bam 69015497243 BAM NA b80b63f6-7a70-4c26-935d-88f1f17964fc 077adafee790a66e0081593cbffa0ed3 hg19 Primary Tumor C3L-01637-03 .high_cov C3L-01639.MethArray.Green.T C3L-01639 UCEC Methylation Array tumor CPT0091780009 202234380054_R04C01_Grn.idat 13676231 IDAT Green 80a05653-270a-4d9b-b0a7-4c4f2580fd71 db780019b29481c995c48e62755f51b4 NA Primary Tumor C3L-01639-01 @@ -6923,8 +6925,8 @@ C3L-01683.WXS.N C3L-01683 LUAD WXS blood_normal CPT0112390002 CPT0112390002.Whol C3L-01683.WXS.N.hg38 C3L-01683 LUAD WXS blood_normal CPT0112390002 4b0c9eb2-41c6-4dee-8f50-05493e5cae42_wxs_gdc_realn.bam 49176119220 BAM NA c794fbcc-e3c1-4bc7-b627-bd941df92fa2 36ef7056c55306296620f0c7d9860ab6 hg38 Blood Derived Normal C3L-01683-31 C3L-01683.WXS.T C3L-01683 LUAD WXS tumor CPT0110980010 CPT0110980010.WholeExome.RP-1303.bam 31019292341 BAM NA 05714eed-81f0-48c4-9219-3dd152fad062 5e6687df85e57a30d45f9721e9e50dcc hg19 Primary Tumor C3L-01683-01,C3L-01683-02 C3L-01683.WXS.T.hg38 C3L-01683 LUAD WXS tumor CPT0110980010 aaf33d60-8d89-4373-9f8e-1514cf2bf2ec_wxs_gdc_realn.bam 41752200762 BAM NA 921e71d0-4543-4669-b2bb-82b6039f5927 d9dfdef94a0a42c5b9494ef28d2d7c3a hg38 Primary Tumor C3L-01683-01,C3L-01683-02 -C3L-01687.MethArray.Green.T C3L-01687 PDA Methylation Array tumor CPT0094630010 202234370091_R07C01_Grn.idat 13676231 IDAT Green 9bf7f925-8f47-492b-80a0-2e90cf68d773 063cbe0d1a3059ccd4f67f65c7e653e9 NA Primary Tumor C3L-01687-01,C3L-01687-02,C3L-01687-03 -C3L-01687.MethArray.Red.T C3L-01687 PDA Methylation Array tumor CPT0094630010 202234370091_R07C01_Red.idat 13676231 IDAT Red 0cf7d962-68c5-4e53-98af-8e1c93ac7b31 9f36c9e3fcc613c8a15f1c5d44a96999 NA Primary Tumor C3L-01687-01,C3L-01687-02,C3L-01687-03 +C3L-01687.MethArray.Green.T.DEEP_v6mW8g C3L-01687 PDA Methylation Array tumor CPT0094630010 202234370091_R07C01_Grn.idat 13676231 IDAT Green 9bf7f925-8f47-492b-80a0-2e90cf68d773 063cbe0d1a3059ccd4f67f65c7e653e9 NA Primary Tumor C3L-01687-01,C3L-01687-02,C3L-01687-03 deep_sequencing DEEP_v6mW8g Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01687.MethArray.Red.T.DEEP_v6mW8g C3L-01687 PDA Methylation Array tumor CPT0094630010 202234370091_R07C01_Red.idat 13676231 IDAT Red 0cf7d962-68c5-4e53-98af-8e1c93ac7b31 9f36c9e3fcc613c8a15f1c5d44a96999 NA Primary Tumor C3L-01687-01,C3L-01687-02,C3L-01687-03 deep_sequencing DEEP_v6mW8g Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01687.miRNA-Seq.T C3L-01687 PDA miRNA-Seq tumor CPT0094630007 180828_UNC32-K00270_0112_AHWTLNBBXX_ATGTCA_S7_L006_R1_001.unaln.bam 275072884 BAM NA 5f576970-48a9-4e50-ae00-b0cb6ef0ed7a 458dc48f76cfc9446f72f0e83c6ed9ae NA Primary Tumor C3L-01687-01,C3L-01687-02,C3L-01687-03 C3L-01687.miRNA-Seq.T.hg38 C3L-01687 PDA miRNA-Seq tumor CPT0094630007 4f465a6a-7726-486b-9a47-0d9ba0f7054c_mirnaseq_gdc_realn.bam 306088175 BAM NA 8795eac6-d7ec-4d20-8ad2-363ff7f85087 a6a415c370ceafb5c1f6534628e84ba1 hg38 Primary Tumor C3L-01687-01,C3L-01687-02,C3L-01687-03 C3L-01687.RNA-Seq.chimeric.T.hg38 C3L-01687 PDA RNA-Seq tumor CPT0094630007 5a1e238f-94df-4910-a2e9-76618dfbe4cd.rna_seq.chimeric.gdc_realn.bam 33951816 BAM chimeric feb73471-6940-4418-8845-0babfac0e99e 608225da6a303b8140668ff1ae3459a0 hg38 Primary Tumor C3L-01687-01,C3L-01687-02,C3L-01687-03 @@ -6935,18 +6937,18 @@ C3L-01687.RNA-Seq.transcriptome.T.hg38 C3L-01687 PDA RNA-Seq tumor CPT0094630007 C3L-01687.Targeted.T C3L-01687 PDA Targeted Sequencing tumor CPT0094630010_1 CPT0094630010_1.CustomSelection.RP-1303.PDO-18786.bam 6042277368 BAM NA 8b005314-53d4-4033-9b22-99bf08de8bb4 75ca37707163d3e3c567e55e92c9108a hg19 Primary Tumor C3L-01687-03 C3L-01687.WGS.N C3L-01687 PDA WGS blood_normal CPT0094670002 CPT0094670002.WholeGenome.RP-1303.bam 59918366925 BAM NA d59ddcea-7cbb-46c2-bb05-88a1b82da943 24f8e408bc7949d9c801d06083d68c43 hg19 Blood Derived Normal C3L-01687-31 C3L-01687.WGS.N.hg38 C3L-01687 PDA WGS blood_normal CPT0094670002 e1a71e63-7248-4ca7-a7a5-be2a7c90de9f_wgs_gdc_realn.bam 90074313556 BAM NA 1f705ea1-bfc3-4ef4-9471-861e4105d2cd 4402f5504d60a5daea49fdc8708a9041 hg38 Blood Derived Normal C3L-01687-31 -C3L-01687.WGS.T C3L-01687 PDA WGS tumor CPT0094630010 CPT0094630010.WholeGenome.RP-1303.bam 64067472974 BAM NA 4d66b8e3-e6bc-46cf-8270-63462a2fc99e ab5ebee495fe0ea6a39c768bb7a77169 hg19 Primary Tumor C3L-01687-01,C3L-01687-02,C3L-01687-03 -C3L-01687.WGS.T.hg38 C3L-01687 PDA WGS tumor CPT0094630010 c1d8b688-7c23-466a-8885-f6fa38811bac_wgs_gdc_realn.bam 95381576935 BAM NA fb2c5c36-3522-435b-956e-5a141c175fa8 e3da622294804d05283b80b77461422c hg38 Primary Tumor C3L-01687-01,C3L-01687-02,C3L-01687-03 +C3L-01687.WGS.T.DEEP_v6mW8g C3L-01687 PDA WGS tumor CPT0094630010 CPT0094630010.WholeGenome.RP-1303.bam 64067472974 BAM NA 4d66b8e3-e6bc-46cf-8270-63462a2fc99e ab5ebee495fe0ea6a39c768bb7a77169 hg19 Primary Tumor C3L-01687-01,C3L-01687-02,C3L-01687-03 deep_sequencing DEEP_v6mW8g Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01687.WGS.T.DEEP_v6mW8g.hg38 C3L-01687 PDA WGS tumor CPT0094630010 c1d8b688-7c23-466a-8885-f6fa38811bac_wgs_gdc_realn.bam 95381576935 BAM NA fb2c5c36-3522-435b-956e-5a141c175fa8 e3da622294804d05283b80b77461422c hg38 Primary Tumor C3L-01687-01,C3L-01687-02,C3L-01687-03 deep_sequencing DEEP_v6mW8g Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01687.WXS.N C3L-01687 PDA WXS blood_normal CPT0094670002 CPT0094670002.WholeExome.RP-1303.bam 31470431551 BAM NA b72b4257-f1c5-4fdf-ac21-9e7311fb7cc7 f32cc526443e1fa820b4ada479dc73c7 hg19 Blood Derived Normal C3L-01687-31 C3L-01687.WXS.N.hg38 C3L-01687 PDA WXS blood_normal CPT0094670002 e1a71e63-7248-4ca7-a7a5-be2a7c90de9f_wxs_gdc_realn.bam 43745579904 BAM NA 94700395-e6b7-424a-aefd-5004e6dd355d 3ab33096a30126a12f29227284a87009 hg38 Blood Derived Normal C3L-01687-31 -C3L-01687.WXS.T C3L-01687 PDA WXS tumor CPT0094630010 CPT0094630010.WholeExome.RP-1303.bam 43732761409 BAM NA 777f06c3-5b2d-4fdc-bbff-e310b656485d 639ae4d9d142bd79fc7a5e021b907261 hg19 Primary Tumor C3L-01687-01,C3L-01687-02,C3L-01687-03 -C3L-01687.WXS.T.hg38 C3L-01687 PDA WXS tumor CPT0094630010 c1d8b688-7c23-466a-8885-f6fa38811bac_wxs_gdc_realn.bam 60376134555 BAM NA f1631497-e49f-4e81-a80a-a79d521e3fdd d7ae3e411cd2cc8971aeb8bd92712301 hg38 Primary Tumor C3L-01687-01,C3L-01687-02,C3L-01687-03 +C3L-01687.WXS.T.DEEP_v6mW8g C3L-01687 PDA WXS tumor CPT0094630010 CPT0094630010.WholeExome.RP-1303.bam 43732761409 BAM NA 777f06c3-5b2d-4fdc-bbff-e310b656485d 639ae4d9d142bd79fc7a5e021b907261 hg19 Primary Tumor C3L-01687-01,C3L-01687-02,C3L-01687-03 deep_sequencing DEEP_v6mW8g Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01687.WXS.T.DEEP_v6mW8g.hg38 C3L-01687 PDA WXS tumor CPT0094630010 c1d8b688-7c23-466a-8885-f6fa38811bac_wxs_gdc_realn.bam 60376134555 BAM NA f1631497-e49f-4e81-a80a-a79d521e3fdd d7ae3e411cd2cc8971aeb8bd92712301 hg38 Primary Tumor C3L-01687-01,C3L-01687-02,C3L-01687-03 deep_sequencing DEEP_v6mW8g Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01687.WXS.T.hg38.high_cov C3L-01687 PDA WXS tumor CPT0094630010_1 8f41faed-4885-470d-999b-4d4944b7eb8b_wxs_gdc_realn.bam 91626753914 BAM NA eb0e7968-bb03-4b70-9b0f-75f724afd227 134e669f4ccad6d2f35e67e0cc2b4026 hg38 Primary Tumor C3L-01687-03 .high_cov C3L-01687.WXS.T.high_cov C3L-01687 PDA WXS tumor CPT0094630010_1 CPT0094630010_1.WholeExome.RP-1303.bam 66577887109 BAM NA 3273a7e8-466f-44b2-aadb-1b6477c36066 0ea9ff414e792e92f2cc285ceda3989c hg19 Primary Tumor C3L-01687-03 .high_cov C3L-01689.MethArray.Green.A C3L-01689 PDA Methylation Array tissue_normal CPT0094760006 203561450025_R08C01_Grn.idat 13676221 IDAT Green 8d6337ec-3e04-4302-9a12-46473942c8d4 2fa6749bc5f732aeae6fbf407099fab5 NA Solid Tissue Normal C3L-01689-04 -C3L-01689.MethArray.Green.T C3L-01689 PDA Methylation Array tumor CPT0094740010 202234380062_R07C01_Grn.idat 13676231 IDAT Green d5168e96-b2d1-4ddf-80ff-07e54c04c511 e6c78b55bc9c20a290b98a6877d688d4 NA Primary Tumor C3L-01689-02,C3L-01689-03 +C3L-01689.MethArray.Green.T.DEEP_v6DZXg C3L-01689 PDA Methylation Array tumor CPT0094740010 202234380062_R07C01_Grn.idat 13676231 IDAT Green d5168e96-b2d1-4ddf-80ff-07e54c04c511 e6c78b55bc9c20a290b98a6877d688d4 NA Primary Tumor C3L-01689-02,C3L-01689-03 deep_sequencing DEEP_v6DZXg Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01689.MethArray.Red.A C3L-01689 PDA Methylation Array tissue_normal CPT0094760006 203561450025_R08C01_Red.idat 13676221 IDAT Red 6628ff3f-ced2-44ba-98f1-b97790950cd4 b68413f489ac78cd9f492c45b55ac121 NA Solid Tissue Normal C3L-01689-04 -C3L-01689.MethArray.Red.T C3L-01689 PDA Methylation Array tumor CPT0094740010 202234380062_R07C01_Red.idat 13676231 IDAT Red 4fe5994c-9ba5-41d2-8124-759aad6ad09e b6291088ac3acc3e58b66f296418ba05 NA Primary Tumor C3L-01689-02,C3L-01689-03 +C3L-01689.MethArray.Red.T.DEEP_v6DZXg C3L-01689 PDA Methylation Array tumor CPT0094740010 202234380062_R07C01_Red.idat 13676231 IDAT Red 4fe5994c-9ba5-41d2-8124-759aad6ad09e b6291088ac3acc3e58b66f296418ba05 NA Primary Tumor C3L-01689-02,C3L-01689-03 deep_sequencing DEEP_v6DZXg Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01689.miRNA-Seq.A C3L-01689 PDA miRNA-Seq tissue_normal CPT0094760009 181108_UNC31-K00269_0162_AH255GBBXY_TCCCGA_S22_L001_R1_001.unaln.bam 200019046 BAM NA 7d72c29e-97f0-4518-9fc3-757049274b7f 2b465238eb477e928b10a6cdc43c7be1 NA Solid Tissue Normal C3L-01689-04 C3L-01689.miRNA-Seq.A.hg38 C3L-01689 PDA miRNA-Seq tissue_normal CPT0094760009 6020a21d-600e-483b-81f8-cfee57009e80_mirnaseq_gdc_realn.bam 227635769 BAM NA cd0d1fb0-f328-4498-97d0-6c20795379ba b208ee543105575f2f24fad0b10be4b6 hg38 Solid Tissue Normal C3L-01689-04 C3L-01689.miRNA-Seq.T C3L-01689 PDA miRNA-Seq tumor CPT0094740007 180828_UNC32-K00270_0112_AHWTLNBBXX_CCGTCC_S8_L006_R1_001.unaln.bam 267704212 BAM NA 8a60cbfb-3cfe-4d46-a90e-e13bf0c6dae5 56342d5cce78fa7f1c3808cc42d86d0b NA Primary Tumor C3L-01689-02,C3L-01689-03 @@ -6966,14 +6968,14 @@ C3L-01689.WGS.A C3L-01689 PDA WGS tissue_normal CPT0094760006 CPT0094760006.Whol C3L-01689.WGS.A.hg38 C3L-01689 PDA WGS tissue_normal CPT0094760006 956c67e8-45fd-4182-adde-a1f05cbfc38d_wgs_gdc_realn.bam 93123693968 BAM NA 5436e6cd-254a-4c6c-9774-9e794fb1104e 14e8281e22d52e02f9bb3ede6f979fb2 hg38 Solid Tissue Normal C3L-01689-04 C3L-01689.WGS.N C3L-01689 PDA WGS blood_normal CPT0094770002 CPT0094770002.WholeGenome.RP-1303.bam 60299258990 BAM NA 2af53dea-8364-4253-8427-c9441ee4f662 f84cb711fb665d0097e096ace27f2778 hg19 Blood Derived Normal C3L-01689-31 C3L-01689.WGS.N.hg38 C3L-01689 PDA WGS blood_normal CPT0094770002 46e8ae07-a169-4f32-b287-765baebdb791_wgs_gdc_realn.bam 88927334534 BAM NA e39d2edb-7a85-49c1-bafd-9ed460b73941 b90739ced10f36da759036a4ee28218e hg38 Blood Derived Normal C3L-01689-31 -C3L-01689.WGS.T C3L-01689 PDA WGS tumor CPT0094740010 CPT0094740010.WholeGenome.RP-1303.bam 73456602702 BAM NA f8165680-b07f-4708-a3e8-e97af131b4fd 4e22dc94ef615a543c444b230ff26042 hg19 Primary Tumor C3L-01689-02,C3L-01689-03 -C3L-01689.WGS.T.hg38 C3L-01689 PDA WGS tumor CPT0094740010 9c14f2c0-7b52-4168-8622-3dea77dc1c8c_wgs_gdc_realn.bam 108304178142 BAM NA 7e8efdd4-7fad-4e46-aa74-5e1bf4b2f149 07128dd863255b7f6ebb6577fbca80b3 hg38 Primary Tumor C3L-01689-02,C3L-01689-03 +C3L-01689.WGS.T.DEEP_v6DZXg C3L-01689 PDA WGS tumor CPT0094740010 CPT0094740010.WholeGenome.RP-1303.bam 73456602702 BAM NA f8165680-b07f-4708-a3e8-e97af131b4fd 4e22dc94ef615a543c444b230ff26042 hg19 Primary Tumor C3L-01689-02,C3L-01689-03 deep_sequencing DEEP_v6DZXg Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01689.WGS.T.DEEP_v6DZXg.hg38 C3L-01689 PDA WGS tumor CPT0094740010 9c14f2c0-7b52-4168-8622-3dea77dc1c8c_wgs_gdc_realn.bam 108304178142 BAM NA 7e8efdd4-7fad-4e46-aa74-5e1bf4b2f149 07128dd863255b7f6ebb6577fbca80b3 hg38 Primary Tumor C3L-01689-02,C3L-01689-03 deep_sequencing DEEP_v6DZXg Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01689.WXS.A C3L-01689 PDA WXS tissue_normal CPT0094760006 CPT0094760006.WholeExome.RP-1303.bam 25392784181 BAM NA bffe1464-9611-4005-bfc2-f4f0b0976050 4613499ab6af9ffc87e5bab04dd64d36 hg19 Solid Tissue Normal C3L-01689-04 C3L-01689.WXS.A.hg38 C3L-01689 PDA WXS tissue_normal CPT0094760006 956c67e8-45fd-4182-adde-a1f05cbfc38d_wxs_gdc_realn.bam 34356297034 BAM NA ae0b772c-cb89-4b3e-b335-42118c516745 c1318deeb864d1c18c7e8ba4fbce23b9 hg38 Solid Tissue Normal C3L-01689-04 C3L-01689.WXS.N C3L-01689 PDA WXS blood_normal CPT0094770002 CPT0094770002.WholeExome.RP-1303.bam 46245118461 BAM NA f01c91c8-f14b-433e-8085-acdcedc77e32 b28f0157e05e40d39bf36312df385bba hg19 Blood Derived Normal C3L-01689-31 C3L-01689.WXS.N.hg38 C3L-01689 PDA WXS blood_normal CPT0094770002 46e8ae07-a169-4f32-b287-765baebdb791_wxs_gdc_realn.bam 64223755589 BAM NA 642cddf7-2f67-4d03-9635-06c554458f3c fa235e4d741a8bb10d3a65b5f8af2caf hg38 Blood Derived Normal C3L-01689-31 -C3L-01689.WXS.T C3L-01689 PDA WXS tumor CPT0094740010 CPT0094740010.WholeExome.RP-1303.bam 35996325264 BAM NA e23087d7-1fd1-40d7-9480-d756b398de93 9c3384701d5052e7efbbcaa0abcc6dfc hg19 Primary Tumor C3L-01689-02,C3L-01689-03 -C3L-01689.WXS.T.hg38 C3L-01689 PDA WXS tumor CPT0094740010 9c14f2c0-7b52-4168-8622-3dea77dc1c8c_wxs_gdc_realn.bam 49728274691 BAM NA fda1347e-80b9-4cac-ab47-d6625b0fed2f f12ef1dd33e48b7e63003d88ba70413d hg38 Primary Tumor C3L-01689-02,C3L-01689-03 +C3L-01689.WXS.T.DEEP_v6DZXg C3L-01689 PDA WXS tumor CPT0094740010 CPT0094740010.WholeExome.RP-1303.bam 35996325264 BAM NA e23087d7-1fd1-40d7-9480-d756b398de93 9c3384701d5052e7efbbcaa0abcc6dfc hg19 Primary Tumor C3L-01689-02,C3L-01689-03 deep_sequencing DEEP_v6DZXg Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01689.WXS.T.DEEP_v6DZXg.hg38 C3L-01689 PDA WXS tumor CPT0094740010 9c14f2c0-7b52-4168-8622-3dea77dc1c8c_wxs_gdc_realn.bam 49728274691 BAM NA fda1347e-80b9-4cac-ab47-d6625b0fed2f f12ef1dd33e48b7e63003d88ba70413d hg38 Primary Tumor C3L-01689-02,C3L-01689-03 deep_sequencing DEEP_v6DZXg Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01689.WXS.T.hg38.high_cov C3L-01689 PDA WXS tumor CPT0094740010_1 70a35058-7366-48fe-9d20-279e5067a318_wxs_gdc_realn.bam 86331664244 BAM NA 84b33e50-751c-41df-a998-e13d2d37eed0 1cb7b06936f48ed62bea4726d3ce80a7 hg38 Primary Tumor C3L-01689-03 .high_cov C3L-01689.WXS.T.high_cov C3L-01689 PDA WXS tumor CPT0094740010_1 CPT0094740010_1.WholeExome.RP-1303.bam 63058697539 BAM NA 00bf0247-9154-461a-ba35-264fb2cb6687 0b346609719287308266ff0043185737 hg19 Primary Tumor C3L-01689-03 .high_cov C3L-01696.MethArray.Green.Tbm C3L-01696 AML Methylation Array tumor_bone_marrow CPT0166290002 203561620054_R05C01_Grn.idat 13676231 IDAT Green 090922bd-5325-4c89-9a7c-3b5fac7b9ca9 93eeadd0c007c600927a318eeb2d19ec NA Primary Blood Derived Cancer - Bone Marrow C3L-01696-54 @@ -7010,8 +7012,8 @@ C3L-01700.WXS.Nbc C3L-01700 AML WXS buccal_normal CPT0200790002 CPT0200790002.Wh C3L-01700.WXS.Nbc.hg38 C3L-01700 AML WXS buccal_normal CPT0200790002 7516f386-c88b-4bb7-8387-3973bf607a6b_wxs_gdc_realn.bam 36212867962 BAM NA 676720f7-87ab-4d27-b690-8f1cb45a3553 afdd5e21c53151158bdc27d2c9a888ef hg38 Buccal Cell Normal C3L-01700-51,C3L-01700-52,C3L-01700-53 C3L-01700.WXS.Tbm C3L-01700 AML WXS tumor_bone_marrow CPT0200690002 CPT0200690002.WholeExome.RP-1303.bam 26681592219 BAM NA a2706344-3c5a-4879-897c-c32c49e7ccdc 4d47f41b6bc01a2656ae1536084c84d9 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-01700-54 C3L-01700.WXS.Tbm.hg38 C3L-01700 AML WXS tumor_bone_marrow CPT0200690002 033d0e2c-f775-4175-af88-e5ee38b6f78d_wxs_gdc_realn.bam 37431702287 BAM NA 373bc943-3146-4c77-920e-ce7624d3eb57 5639417bf248ba887c4e3d09bd29d595 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-01700-54 -C3L-01702.MethArray.Green.T C3L-01702 PDA Methylation Array tumor CPT0094830010 202234380050_R06C01_Grn.idat 13676231 IDAT Green 438bc4df-f421-4585-9a47-b5cee9667812 40e25dc510c47f3a5334f50798c98044 NA Primary Tumor C3L-01702-01,C3L-01702-02 -C3L-01702.MethArray.Red.T C3L-01702 PDA Methylation Array tumor CPT0094830010 202234380050_R06C01_Red.idat 13676231 IDAT Red bd493cff-cbf2-48e4-865b-07287c6dab44 609fd297afae6407598ad5a9799e402f NA Primary Tumor C3L-01702-01,C3L-01702-02 +C3L-01702.MethArray.Green.T.DEEP_v6Rm7r C3L-01702 PDA Methylation Array tumor CPT0094830010 202234380050_R06C01_Grn.idat 13676231 IDAT Green 438bc4df-f421-4585-9a47-b5cee9667812 40e25dc510c47f3a5334f50798c98044 NA Primary Tumor C3L-01702-01,C3L-01702-02 deep_sequencing DEEP_v6Rm7r Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01702.MethArray.Red.T.DEEP_v6Rm7r C3L-01702 PDA Methylation Array tumor CPT0094830010 202234380050_R06C01_Red.idat 13676231 IDAT Red bd493cff-cbf2-48e4-865b-07287c6dab44 609fd297afae6407598ad5a9799e402f NA Primary Tumor C3L-01702-01,C3L-01702-02 deep_sequencing DEEP_v6Rm7r Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01702.miRNA-Seq.T C3L-01702 PDA miRNA-Seq tumor CPT0094830007 180828_UNC32-K00270_0112_AHWTLNBBXX_GTAGAG_S9_L006_R1_001.unaln.bam 284932613 BAM NA f074102a-9da6-4f33-b66e-f8649ab346ce ff50a265da27e73f5175a9e10f7fc64a NA Primary Tumor C3L-01702-01,C3L-01702-02 C3L-01702.miRNA-Seq.T.hg38 C3L-01702 PDA miRNA-Seq tumor CPT0094830007 1353f095-3b61-4410-a77f-43f4b366bc82_mirnaseq_gdc_realn.bam 311898874 BAM NA 77c2bae3-6a6c-455f-8c9e-f26b0b8a8ab5 48bd491445ad0f17eb4b60c3920d34b2 hg38 Primary Tumor C3L-01702-01,C3L-01702-02 C3L-01702.RNA-Seq.chimeric.T.hg38 C3L-01702 PDA RNA-Seq tumor CPT0094830007 90f3f026-abd6-4464-87dc-0daa7ef1ac4e.rna_seq.chimeric.gdc_realn.bam 114389486 BAM chimeric 12dbde8f-97e9-4279-bc82-077e6ff7dfaa e05a9e7e4572f62d052f9e9023022f17 hg38 Primary Tumor C3L-01702-01,C3L-01702-02 @@ -7022,18 +7024,18 @@ C3L-01702.RNA-Seq.transcriptome.T.hg38 C3L-01702 PDA RNA-Seq tumor CPT0094830007 C3L-01702.Targeted.T C3L-01702 PDA Targeted Sequencing tumor CPT0094830010_1 CPT0094830010_1.CustomSelection.RP-1303.PDO-18786.bam 5580823428 BAM NA 1be815f0-15eb-414a-adcf-81aaed2aa4cf f667b424e85b355fecb907b88526ce20 hg19 Primary Tumor C3L-01702-01 C3L-01702.WGS.N C3L-01702 PDA WGS blood_normal CPT0094880007 CPT0094880007.WholeGenome.RP-1303.bam 66603108727 BAM NA 0a8e9af3-adc6-478f-bc4b-4398e6ad20fb 123e112a505af678905f81b6f2f73504 hg19 Blood Derived Normal C3L-01702-32 C3L-01702.WGS.N.hg38 C3L-01702 PDA WGS blood_normal CPT0094880007 bd447a9a-1de1-4b99-83b1-bc021ce634f8_wgs_gdc_realn.bam 98616070203 BAM NA f10fc8b4-5c83-4b4a-a27c-4f42bb53aff5 e419f9c997c7fc2cbf3d4631537073a9 hg38 Blood Derived Normal C3L-01702-32 -C3L-01702.WGS.T C3L-01702 PDA WGS tumor CPT0094830010 CPT0094830010.WholeGenome.RP-1303.bam 58687941397 BAM NA a602cf67-ca06-48a6-8338-30ee4d1d77b4 4b055203fddf86aa982d869c6cebddf7 hg19 Primary Tumor C3L-01702-01,C3L-01702-02 -C3L-01702.WGS.T.hg38 C3L-01702 PDA WGS tumor CPT0094830010 55cb86b0-a9bf-4ebe-a6e1-4980151e80cf_wgs_gdc_realn.bam 87944993380 BAM NA 07e5550b-cc74-4209-a752-5ca156d2362a 5ce8012f60ebeed2c60a150b07a29a9b hg38 Primary Tumor C3L-01702-01,C3L-01702-02 +C3L-01702.WGS.T.DEEP_v6Rm7r C3L-01702 PDA WGS tumor CPT0094830010 CPT0094830010.WholeGenome.RP-1303.bam 58687941397 BAM NA a602cf67-ca06-48a6-8338-30ee4d1d77b4 4b055203fddf86aa982d869c6cebddf7 hg19 Primary Tumor C3L-01702-01,C3L-01702-02 deep_sequencing DEEP_v6Rm7r Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01702.WGS.T.DEEP_v6Rm7r.hg38 C3L-01702 PDA WGS tumor CPT0094830010 55cb86b0-a9bf-4ebe-a6e1-4980151e80cf_wgs_gdc_realn.bam 87944993380 BAM NA 07e5550b-cc74-4209-a752-5ca156d2362a 5ce8012f60ebeed2c60a150b07a29a9b hg38 Primary Tumor C3L-01702-01,C3L-01702-02 deep_sequencing DEEP_v6Rm7r Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01702.WXS.N C3L-01702 PDA WXS blood_normal CPT0094880007 CPT0094880007.WholeExome.RP-1303.bam 35445807566 BAM NA 12468c4b-d9ce-4d7b-a291-49628aaf34e4 eebbb203b9b82fa7867829ce9991d4ea hg19 Blood Derived Normal C3L-01702-32 C3L-01702.WXS.N.hg38 C3L-01702 PDA WXS blood_normal CPT0094880007 bd447a9a-1de1-4b99-83b1-bc021ce634f8_wxs_gdc_realn.bam 49848189087 BAM NA 60696094-cd7b-40cf-9e6d-d51915c7a511 c0c776af9f146669ffa4b939f87ba52a hg38 Blood Derived Normal C3L-01702-32 -C3L-01702.WXS.T C3L-01702 PDA WXS tumor CPT0094830010 CPT0094830010.WholeExome.RP-1303.bam 29146374479 BAM NA 44ee9592-592d-41d3-87b7-4b1ed91b0ba4 ec00986e72bcbb460f8b4a0a58e41e69 hg19 Primary Tumor C3L-01702-01,C3L-01702-02 -C3L-01702.WXS.T.hg38 C3L-01702 PDA WXS tumor CPT0094830010 55cb86b0-a9bf-4ebe-a6e1-4980151e80cf_wxs_gdc_realn.bam 39992771737 BAM NA 72ae9b49-9baa-4db9-a3be-46eebb8e3589 fb452736937f3b109c7137b6899dc5af hg38 Primary Tumor C3L-01702-01,C3L-01702-02 +C3L-01702.WXS.T.DEEP_v6Rm7r C3L-01702 PDA WXS tumor CPT0094830010 CPT0094830010.WholeExome.RP-1303.bam 29146374479 BAM NA 44ee9592-592d-41d3-87b7-4b1ed91b0ba4 ec00986e72bcbb460f8b4a0a58e41e69 hg19 Primary Tumor C3L-01702-01,C3L-01702-02 deep_sequencing DEEP_v6Rm7r Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01702.WXS.T.DEEP_v6Rm7r.hg38 C3L-01702 PDA WXS tumor CPT0094830010 55cb86b0-a9bf-4ebe-a6e1-4980151e80cf_wxs_gdc_realn.bam 39992771737 BAM NA 72ae9b49-9baa-4db9-a3be-46eebb8e3589 fb452736937f3b109c7137b6899dc5af hg38 Primary Tumor C3L-01702-01,C3L-01702-02 deep_sequencing DEEP_v6Rm7r Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01702.WXS.T.hg38.high_cov C3L-01702 PDA WXS tumor CPT0094830010_1 76607a42-17bf-4fe3-b086-c68c0b5f857b_wxs_gdc_realn.bam 74973388821 BAM NA 6a4fd777-cb3b-4fc1-9eb0-3e65847a51f9 3e0178881d6382bea22a28e27dde1582 hg38 Primary Tumor C3L-01702-01 .high_cov C3L-01702.WXS.T.high_cov C3L-01702 PDA WXS tumor CPT0094830010_1 CPT0094830010_1.WholeExome.RP-1303.bam 54828665281 BAM NA 477cb053-f14e-4957-85c4-9029aa12e15a e7ab5296f7ce22a87483e2f6670ef93c hg19 Primary Tumor C3L-01702-01 .high_cov C3L-01703.MethArray.Green.A C3L-01703 PDA Methylation Array tissue_normal CPT0094960010 203561450023_R01C01_Grn.idat 13676221 IDAT Green f38ae311-48b0-44a7-8169-9884a6658642 98586614749abf7edcf3193d697fb84f NA Solid Tissue Normal C3L-01703-04 -C3L-01703.MethArray.Green.T C3L-01703 PDA Methylation Array tumor CPT0094940010 202234380064_R06C01_Grn.idat 13676231 IDAT Green 714472e8-9bfe-4fe9-bed3-21e1a5715cbe 145d08ad4ce0bd56b6758865c4af47a7 NA Primary Tumor C3L-01703-02,C3L-01703-03 +C3L-01703.MethArray.Green.T.DEEP_v6Lv9r C3L-01703 PDA Methylation Array tumor CPT0094940010 202234380064_R06C01_Grn.idat 13676231 IDAT Green 714472e8-9bfe-4fe9-bed3-21e1a5715cbe 145d08ad4ce0bd56b6758865c4af47a7 NA Primary Tumor C3L-01703-02,C3L-01703-03 deep_sequencing DEEP_v6Lv9r Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01703.MethArray.Red.A C3L-01703 PDA Methylation Array tissue_normal CPT0094960010 203561450023_R01C01_Red.idat 13676221 IDAT Red 3fd23c44-da6f-47f4-a499-0d8cdd15fc99 91339c86e8175f208d771ae8ecc744ea NA Solid Tissue Normal C3L-01703-04 -C3L-01703.MethArray.Red.T C3L-01703 PDA Methylation Array tumor CPT0094940010 202234380064_R06C01_Red.idat 13676231 IDAT Red 6b86d69c-78a1-4f81-9f5c-bd4f709b74c2 0ad8053a266b06764e611fffffef2d96 NA Primary Tumor C3L-01703-02,C3L-01703-03 +C3L-01703.MethArray.Red.T.DEEP_v6Lv9r C3L-01703 PDA Methylation Array tumor CPT0094940010 202234380064_R06C01_Red.idat 13676231 IDAT Red 6b86d69c-78a1-4f81-9f5c-bd4f709b74c2 0ad8053a266b06764e611fffffef2d96 NA Primary Tumor C3L-01703-02,C3L-01703-03 deep_sequencing DEEP_v6Lv9r Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01703.miRNA-Seq.A C3L-01703 PDA miRNA-Seq tissue_normal CPT0094960008 181108_UNC31-K00269_0162_AH255GBBXY_CCAACA_S12_L001_R1_001.unaln.bam 245669243 BAM NA 6ad9c5c3-d9e8-4d87-93fd-17970e8bd8c8 284ada4734f65e116e6823808135c07a NA Solid Tissue Normal C3L-01703-04 C3L-01703.miRNA-Seq.A.hg38 C3L-01703 PDA miRNA-Seq tissue_normal CPT0094960008 87a356a4-beb8-4f93-baee-d84614c8416a_mirnaseq_gdc_realn.bam 275503606 BAM NA 2b4d7f10-2222-45c1-bf14-8064c2518c0a 50cb66e33451e19310cf68f8d5d9b889 hg38 Solid Tissue Normal C3L-01703-04 C3L-01703.miRNA-Seq.T C3L-01703 PDA miRNA-Seq tumor CPT0094940007 180828_UNC32-K00270_0112_AHWTLNBBXX_GTCCGC_S10_L006_R1_001.unaln.bam 252951231 BAM NA b41bc34e-54fa-4cd5-8441-cf3b3e435207 57d9194b7ad7fb0d6f643a979c7dac49 NA Primary Tumor C3L-01703-02,C3L-01703-03 @@ -7051,14 +7053,14 @@ C3L-01703.RNA-Seq.transcriptome.T.hg38 C3L-01703 PDA RNA-Seq tumor CPT0094940007 C3L-01703.Targeted.T C3L-01703 PDA Targeted Sequencing tumor CPT0094940010_1 CPT0094940010_1.CustomSelection.RP-1303.PDO-18786.bam 4809621426 BAM NA 7468a6f6-9521-4af0-8608-c32a74e0984f 380776795bbaef6d8839b6e2a35b560b hg19 Primary Tumor C3L-01703-02 C3L-01703.WGS.N C3L-01703 PDA WGS blood_normal CPT0094970002 CPT0094970002.WholeGenome.RP-1303.bam 66459083198 BAM NA 05fe0bad-2316-4316-a574-c472ad54509a 45407d626a7e4410700a26cd442e7be3 hg19 Blood Derived Normal C3L-01703-31 C3L-01703.WGS.N.hg38 C3L-01703 PDA WGS blood_normal CPT0094970002 7c47a0a7-9a2f-4006-8f6a-3e28003ad4ba_wgs_gdc_realn.bam 96521300507 BAM NA 430334ce-61c4-44bd-86e4-30a9b853a35f 994e11bc666e4c3b31b873c1a475aa45 hg38 Blood Derived Normal C3L-01703-31 -C3L-01703.WGS.T C3L-01703 PDA WGS tumor CPT0094940010 CPT0094940010.WholeGenome.RP-1303.bam 63236078790 BAM NA 1c6c1eac-4121-4b8f-a3c3-ed1ed2894bfb 5b9c11cb417cd04464f141846f63ed44 hg19 Primary Tumor C3L-01703-02,C3L-01703-03 -C3L-01703.WGS.T.hg38 C3L-01703 PDA WGS tumor CPT0094940010 22e84ec7-9a85-4e63-9eb2-93c3df982d12_wgs_gdc_realn.bam 93446960059 BAM NA e4b8c2ab-d38f-4be2-b18b-f49825caa583 92906f7ff2c8101ff39a67ae07f4400d hg38 Primary Tumor C3L-01703-02,C3L-01703-03 +C3L-01703.WGS.T.DEEP_v6Lv9r C3L-01703 PDA WGS tumor CPT0094940010 CPT0094940010.WholeGenome.RP-1303.bam 63236078790 BAM NA 1c6c1eac-4121-4b8f-a3c3-ed1ed2894bfb 5b9c11cb417cd04464f141846f63ed44 hg19 Primary Tumor C3L-01703-02,C3L-01703-03 deep_sequencing DEEP_v6Lv9r Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01703.WGS.T.DEEP_v6Lv9r.hg38 C3L-01703 PDA WGS tumor CPT0094940010 22e84ec7-9a85-4e63-9eb2-93c3df982d12_wgs_gdc_realn.bam 93446960059 BAM NA e4b8c2ab-d38f-4be2-b18b-f49825caa583 92906f7ff2c8101ff39a67ae07f4400d hg38 Primary Tumor C3L-01703-02,C3L-01703-03 deep_sequencing DEEP_v6Lv9r Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01703.WXS.A C3L-01703 PDA WXS tissue_normal CPT0094960010 CPT0094960010.WholeExome.RP-1303.bam 30385230653 BAM NA bf6703e9-667f-454d-aad3-98475ade9384 3a3fad650f9a6f647afa138138804cb8 hg19 Solid Tissue Normal C3L-01703-04 C3L-01703.WXS.A.hg38 C3L-01703 PDA WXS tissue_normal CPT0094960010 2d4951d2-7c59-4a5b-80c3-7633bcc001ee_wxs_gdc_realn.bam 40587209626 BAM NA 3bffc900-69df-4e45-b830-8d9f7a197754 2fa931afff54f85f2b98275a0556b7e0 hg38 Solid Tissue Normal C3L-01703-04 C3L-01703.WXS.N C3L-01703 PDA WXS blood_normal CPT0094970002 CPT0094970002.WholeExome.RP-1303.bam 43038313993 BAM NA f2819075-c3ae-4c80-b049-5502bc6ca5fb b846cb0bace37ad667bc4e93d73da07b hg19 Blood Derived Normal C3L-01703-31 C3L-01703.WXS.N.hg38 C3L-01703 PDA WXS blood_normal CPT0094970002 7c47a0a7-9a2f-4006-8f6a-3e28003ad4ba_wxs_gdc_realn.bam 59541678927 BAM NA 6569b796-8c93-48a0-8c44-44bf35568138 88bac0db3756afc86bf3bfc9cc5c53b4 hg38 Blood Derived Normal C3L-01703-31 -C3L-01703.WXS.T C3L-01703 PDA WXS tumor CPT0094940010 CPT0094940010.WholeExome.RP-1303.bam 39561107744 BAM NA 72386d2d-a0a6-425b-adf2-685b36e513c0 0b2846784642c667c46ed27b5a673d5b hg19 Primary Tumor C3L-01703-02,C3L-01703-03 -C3L-01703.WXS.T.hg38 C3L-01703 PDA WXS tumor CPT0094940010 22e84ec7-9a85-4e63-9eb2-93c3df982d12_wxs_gdc_realn.bam 54828452093 BAM NA b6c9c622-0812-4e42-8935-59c9d8f6d127 fbf6ca882de3c35d62e43ab9ebcbc876 hg38 Primary Tumor C3L-01703-02,C3L-01703-03 +C3L-01703.WXS.T.DEEP_v6Lv9r C3L-01703 PDA WXS tumor CPT0094940010 CPT0094940010.WholeExome.RP-1303.bam 39561107744 BAM NA 72386d2d-a0a6-425b-adf2-685b36e513c0 0b2846784642c667c46ed27b5a673d5b hg19 Primary Tumor C3L-01703-02,C3L-01703-03 deep_sequencing DEEP_v6Lv9r Duplicate item: Additional DNA for PDA Deep Sequencing +C3L-01703.WXS.T.DEEP_v6Lv9r.hg38 C3L-01703 PDA WXS tumor CPT0094940010 22e84ec7-9a85-4e63-9eb2-93c3df982d12_wxs_gdc_realn.bam 54828452093 BAM NA b6c9c622-0812-4e42-8935-59c9d8f6d127 fbf6ca882de3c35d62e43ab9ebcbc876 hg38 Primary Tumor C3L-01703-02,C3L-01703-03 deep_sequencing DEEP_v6Lv9r Duplicate item: Additional DNA for PDA Deep Sequencing C3L-01703.WXS.T.hg38.high_cov C3L-01703 PDA WXS tumor CPT0094940010_1 80f4521f-2a80-40db-a560-2a54130807f4_wxs_gdc_realn.bam 87982640686 BAM NA 5c1ec140-50a7-49ee-9344-a08b57aa0ad5 b15dc15af7c04363f7fa64f1229c4c5d hg38 Primary Tumor C3L-01703-02 .high_cov C3L-01703.WXS.T.high_cov C3L-01703 PDA WXS tumor CPT0094940010_1 CPT0094940010_1.WholeExome.RP-1303.bam 64073774411 BAM NA aef819e4-e52e-4823-8a33-2e7425725a03 0c82c1ef61fc069c3d7644eb38450978 hg19 Primary Tumor C3L-01703-02 .high_cov C3L-01729.MethArray.Green.T C3L-01729 UCEC Methylation Array tumor CPT0127610006 203219650157_R01C01_Grn.idat 13676221 IDAT Green df1d7fed-defc-4b3e-9fb5-f36758a13276 7e706f8e053dd93198c2cfe18c300b39 NA Primary Tumor C3L-01729-01 @@ -7164,8 +7166,8 @@ C3L-01833.WXS.N C3L-01833 UCEC WXS blood_normal CPT0100050002 CPT0100050002.Whol C3L-01833.WXS.N.hg38 C3L-01833 UCEC WXS blood_normal CPT0100050002 82cd6dc4-3a55-4dda-bead-8ad25b691833_wxs_gdc_realn.bam 59479282409 BAM NA ac95ef0d-244f-4321-b071-e9cc28f73bde 6a3e28368ca67035aacd50a34a04c76e hg38 Blood Derived Normal C3L-01833-32,C3L-01833-71 C3L-01833.WXS.T C3L-01833 UCEC WXS tumor CPT0100010009 CPT0100010009.WholeExome.RP-1303.bam 42621531080 BAM NA 7b8b5412-c020-4abd-a1f1-99bb4faec5c7 9496331af01461ff265f5b8a253ced64 hg19 Primary Tumor C3L-01833-01 C3L-01833.WXS.T.hg38 C3L-01833 UCEC WXS tumor CPT0100010009 e1bf75ae-709e-484b-b4d7-2d589861b32c_wxs_gdc_realn.bam 57838495653 BAM NA 3b7748e1-6351-471b-aca7-0f34d5e5dbc6 f6ba992ecbf516ad7cecfa5de67a8aeb hg38 Primary Tumor C3L-01833-01 -C3L-01834.MethArray.Green.T C3L-01834 GBM Methylation Array tumor CPT0104220010 203027390049_R05C01_Grn.idat 13676235 IDAT Green a72dcd64-cc36-494c-9e15-21061834ab9d 1736dee091a53c995f1ea0588109103b NA Primary Tumor C3L-01834-02 -C3L-01834.MethArray.Red.T C3L-01834 GBM Methylation Array tumor CPT0104220010 203027390049_R05C01_Red.idat 13676235 IDAT Red b70aedb4-4609-4fd4-9088-7bb8fa2319e6 0fec5faba0e5b4cd2fdcc721181e14dc NA Primary Tumor C3L-01834-02 +C3L-01834.MethArray.Green.T.ADNA_vyGzBM C3L-01834 GBM Methylation Array tumor CPT0104220010 203027390049_R05C01_Grn.idat 13676235 IDAT Green a72dcd64-cc36-494c-9e15-21061834ab9d 1736dee091a53c995f1ea0588109103b NA Primary Tumor C3L-01834-02 additional_DNA ADNA_vyGzBM Duplicate item: Additional DNA requested +C3L-01834.MethArray.Red.T.ADNA_vyGzBM C3L-01834 GBM Methylation Array tumor CPT0104220010 203027390049_R05C01_Red.idat 13676235 IDAT Red b70aedb4-4609-4fd4-9088-7bb8fa2319e6 0fec5faba0e5b4cd2fdcc721181e14dc NA Primary Tumor C3L-01834-02 additional_DNA ADNA_vyGzBM Duplicate item: Additional DNA requested C3L-01834.miRNA-Seq.T C3L-01834 GBM miRNA-Seq tumor CPT0104220005 181108_UNC31-K00269_0162_AH255GBBXY_CGATGT_S26_L004_R1_001.unaln.bam 284212433 BAM NA 8fb02a71-c6db-4a66-b59b-d7003c8811bb 6b6b19fa0a38a3e0838f5eb9a2a3cfcd NA Primary Tumor C3L-01834-02 C3L-01834.miRNA-Seq.T.hg38 C3L-01834 GBM miRNA-Seq tumor CPT0104220005 64ad87dc-140c-4030-a5b6-eda1a9946f2f_mirnaseq_gdc_realn.bam 317703220 BAM NA fda976ec-7f45-426b-9846-274b67db15e0 839e19cde7f656fd5523460555afb52f hg38 Primary Tumor C3L-01834-02 C3L-01834.RNA-Seq.chimeric.T.hg38 C3L-01834 GBM RNA-Seq tumor CPT0104220005 0bd61f0c-5023-49e8-978d-758d69e12e07.rna_seq.chimeric.gdc_realn.bam 107300205 BAM chimeric 63e9bfc7-a78d-4ae6-98a5-34d3ad1cef86 01f20cfda2edcdf126490c2556a25178 hg38 Primary Tumor C3L-01834-02 @@ -7177,8 +7179,8 @@ C3L-01834.WGS.N C3L-01834 GBM WGS blood_normal CPT0105090002 CPT0105090002.Whole C3L-01834.WGS.N.hg38 C3L-01834 GBM WGS blood_normal CPT0105090002 7bd95971-f2a9-4d31-beb1-cb3aa2d72fb5_wgs_gdc_realn.bam 85614011228 BAM NA 758f901a-f6be-4f59-bc5d-50185c78a336 fd09145a1ed87d8e44b4d6334ab4a88c hg38 Blood Derived Normal C3L-01834-31 C3L-01834.WXS.N C3L-01834 GBM WXS blood_normal CPT0105090002 CPT0105090002.WholeExome.RP-1303.bam 34684127259 BAM NA 9844e3be-cc8e-4838-91a7-c7792ae4970d 18fed23c3f06c32eaafd90dfcc8b47fc hg19 Blood Derived Normal C3L-01834-31 C3L-01834.WXS.N.hg38 C3L-01834 GBM WXS blood_normal CPT0105090002 7bd95971-f2a9-4d31-beb1-cb3aa2d72fb5_wxs_gdc_realn.bam 47769398348 BAM NA 2ce1baf3-67b6-4de5-bb81-51f89abbf1c6 9081d6e991c74b4121072a467b279d89 hg38 Blood Derived Normal C3L-01834-31 -C3L-01834.WXS.T C3L-01834 GBM WXS tumor CPT0104220010 CPT0104220010.WholeExome.RP-1303.bam 22939639897 BAM NA bd78ec3d-c033-4257-b250-2b90eeea5bca 9173bbf5b04c6e1d72559c968f06ac08 hg19 Primary Tumor C3L-01834-02 -C3L-01834.WXS.T.hg38 C3L-01834 GBM WXS tumor CPT0104220010 c0308317-bfca-4564-bc9a-9e31ec5b1336_wxs_gdc_realn.bam 31018736739 BAM NA 18d26f34-47b9-4b58-81da-48f777001d49 607ea328e3a892bd3a0217d691cf9e35 hg38 Primary Tumor C3L-01834-02 +C3L-01834.WXS.T.ADNA_vyGzBM C3L-01834 GBM WXS tumor CPT0104220010 CPT0104220010.WholeExome.RP-1303.bam 22939639897 BAM NA bd78ec3d-c033-4257-b250-2b90eeea5bca 9173bbf5b04c6e1d72559c968f06ac08 hg19 Primary Tumor C3L-01834-02 additional_DNA ADNA_vyGzBM Duplicate item: Additional DNA requested +C3L-01834.WXS.T.ADNA_vyGzBM.hg38 C3L-01834 GBM WXS tumor CPT0104220010 c0308317-bfca-4564-bc9a-9e31ec5b1336_wxs_gdc_realn.bam 31018736739 BAM NA 18d26f34-47b9-4b58-81da-48f777001d49 607ea328e3a892bd3a0217d691cf9e35 hg38 Primary Tumor C3L-01834-02 additional_DNA ADNA_vyGzBM Duplicate item: Additional DNA requested C3L-01836.MethArray.Green.A C3L-01836 CCRCC Methylation Array tissue_normal CPT0086890009 203027390029_R04C01_Grn.idat 13676246 IDAT Green 78fb1b7a-7014-4667-90f1-8955462cbf39 0d4673d1e154b891a3c0d446095bd0de NA Solid Tissue Normal C3L-01836-06 C3L-01836.MethArray.Green.T C3L-01836 CCRCC Methylation Array tumor CPT0086870009 202184900127_R04C01_Grn.idat 13676246 IDAT Green 0fc6c07f-eaec-44a6-bf1a-935915738899 2db1ccec5f2d3df09e51d561b7a3d8ee NA Primary Tumor C3L-01836-02 C3L-01836.MethArray.Green.T.HET_ro9412 C3L-01836 CCRCC Methylation Array tumor CPT0086860009 204372030074_R04C01_Grn.idat 13677880 IDAT Green 0ffe1538-3497-4520-93ca-12ac44151a15 d615c52d695266737cdeea8f9b103b04 NA Primary Tumor C3L-01836-01 heterogeneity HET_ro9412 Duplicate item: CCRCC Tumor heterogeneity study aliquot @@ -7334,8 +7336,8 @@ C3L-01862.WXS.N C3L-01862 LUAD WXS blood_normal CPT0093710002 CPT0093710002.Whol C3L-01862.WXS.N.hg38 C3L-01862 LUAD WXS blood_normal CPT0093710002 57736f53-612c-4e10-a5f2-2bb931276189_wxs_gdc_realn.bam 46554500635 BAM NA de85bf55-9dcb-4a92-b85b-218d58916de2 23cdbaedfe721c0f47512808fb4e2b47 hg38 Blood Derived Normal C3L-01862-31 C3L-01862.WXS.T C3L-01862 LUAD WXS tumor CPT0092530009 CPT0092530009.WholeExome.RP-1303.bam 28515107949 BAM NA 7d3f7e24-3283-46f4-8c3b-7f885c74d3cc 3aee21b99ea46c66fd864ade7986f007 hg19 Primary Tumor C3L-01862-01 C3L-01862.WXS.T.hg38 C3L-01862 LUAD WXS tumor CPT0092530009 fb3d8bc7-276c-4e3d-a25d-f45f8cacb57d_wxs_gdc_realn.bam 38665774426 BAM NA 181112d7-77a9-4439-b080-af2cdad07dd1 72dee14d942d453eb123b506bcacec0d hg38 Primary Tumor C3L-01862-01 -C3L-01864.MethArray.Green.T C3L-01864 UCEC Methylation Array tumor CPT0092860009 202234370086_R01C01_Grn.idat 13676231 IDAT Green 9053923b-97db-47b6-a689-68dcd46935e5 e7fe1190d307dfe9a39a1ae706669d20 NA Primary Tumor C3L-01864-02 -C3L-01864.MethArray.Red.T C3L-01864 UCEC Methylation Array tumor CPT0092860009 202234370086_R01C01_Red.idat 13676231 IDAT Red b72a0ee1-7d4f-4a0f-b222-896d4e27c81e aa3d3b9b41517299588021a6a31abcfd NA Primary Tumor C3L-01864-02 +C3L-01864.MethArray.Green.T.ADNA_rlO8jw C3L-01864 UCEC Methylation Array tumor CPT0092860009 202234370086_R01C01_Grn.idat 13676231 IDAT Green 9053923b-97db-47b6-a689-68dcd46935e5 e7fe1190d307dfe9a39a1ae706669d20 NA Primary Tumor C3L-01864-02 additional_DNA ADNA_rlO8jw Duplicate item: Additional DNA requested +C3L-01864.MethArray.Red.T.ADNA_rlO8jw C3L-01864 UCEC Methylation Array tumor CPT0092860009 202234370086_R01C01_Red.idat 13676231 IDAT Red b72a0ee1-7d4f-4a0f-b222-896d4e27c81e aa3d3b9b41517299588021a6a31abcfd NA Primary Tumor C3L-01864-02 additional_DNA ADNA_rlO8jw Duplicate item: Additional DNA requested C3L-01864.miRNA-Seq.T C3L-01864 UCEC miRNA-Seq tumor CPT0092860006 180724_UNC32-K00270_0106_BHWK3MBBXX_GACGAC_S17_L007_R1_001.unaln.bam 250664341 BAM NA f971a0b1-88cb-41b0-a113-7bac19d2b90e d2660864ede4f24aeddbe03b1d96b2b1 NA Primary Tumor C3L-01864-02 C3L-01864.miRNA-Seq.T.hg38 C3L-01864 UCEC miRNA-Seq tumor CPT0092860006 da25a4de-2fe7-4937-9172-37a99df7da2f_mirnaseq_gdc_realn.bam 266255007 BAM NA d8ed9995-3186-482b-85c4-3ae4b3f56cf1 2e9dfeaddd49491fb3eb562b67a275de hg38 Primary Tumor C3L-01864-02 C3L-01864.RNA-Seq.chimeric.T.hg38 C3L-01864 UCEC RNA-Seq tumor CPT0092860006 47085edc-7a09-48d5-991f-ea2b711120f9.rna_seq.chimeric.gdc_realn.bam 50349603 BAM chimeric a6a00a35-75e3-477a-8175-aa314ac1d941 1d7f1dbd0ffe22f87f2dbcb4e72de12b hg38 Primary Tumor C3L-01864-02 @@ -7345,12 +7347,12 @@ C3L-01864.RNA-Seq.R2.T C3L-01864 UCEC RNA-Seq tumor CPT0092860006 171129_UNC32-K C3L-01864.RNA-Seq.transcriptome.T.hg38 C3L-01864 UCEC RNA-Seq tumor CPT0092860006 47085edc-7a09-48d5-991f-ea2b711120f9.rna_seq.transcriptome.gdc_realn.bam 11520689207 BAM transcriptome 61c10e51-7be6-49ce-b16b-f81622585b0d a8a66ffcf404e8a34daf9b161cf2f748 hg38 Primary Tumor C3L-01864-02 C3L-01864.WGS.N C3L-01864 UCEC WGS blood_normal CPT0093840002 CPT0093840002.WholeGenome.RP-1303.bam 61379417141 BAM NA 88ed8c9f-aea6-479b-a9ba-f8904ec7c833 46e843566813fbff4d46d0e0a4a68984 hg19 Blood Derived Normal C3L-01864-31 C3L-01864.WGS.N.hg38 C3L-01864 UCEC WGS blood_normal CPT0093840002 ebcd3c59-6e3a-4913-8bc4-50fe264a0f67_wgs_gdc_realn.bam 89371314010 BAM NA bcbc24e7-469a-41ab-8589-f6481dcd15f6 9c649ac132e23f543b351da4a76c88e2 hg38 Blood Derived Normal C3L-01864-31 -C3L-01864.WGS.T C3L-01864 UCEC WGS tumor CPT0092860009 CPT0092860009.WholeGenome.RP-1303.bam 66887616993 BAM NA 1c9ccf54-f825-4b68-ad00-163ac120bdc7 a3f930ecceefabdaa55f1d4315926712 hg19 Primary Tumor C3L-01864-02 -C3L-01864.WGS.T.hg38 C3L-01864 UCEC WGS tumor CPT0092860009 31aa7828-c230-4711-a349-8bf53fd585a3_wgs_gdc_realn.bam 99867810467 BAM NA 4fce4f98-6af5-4951-98ad-86af45cf17ca 51109657b8a39074a5610e79fbb9ddb1 hg38 Primary Tumor C3L-01864-02 +C3L-01864.WGS.T.ADNA_rlO8jw C3L-01864 UCEC WGS tumor CPT0092860009 CPT0092860009.WholeGenome.RP-1303.bam 66887616993 BAM NA 1c9ccf54-f825-4b68-ad00-163ac120bdc7 a3f930ecceefabdaa55f1d4315926712 hg19 Primary Tumor C3L-01864-02 additional_DNA ADNA_rlO8jw Duplicate item: Additional DNA requested +C3L-01864.WGS.T.ADNA_rlO8jw.hg38 C3L-01864 UCEC WGS tumor CPT0092860009 31aa7828-c230-4711-a349-8bf53fd585a3_wgs_gdc_realn.bam 99867810467 BAM NA 4fce4f98-6af5-4951-98ad-86af45cf17ca 51109657b8a39074a5610e79fbb9ddb1 hg38 Primary Tumor C3L-01864-02 additional_DNA ADNA_rlO8jw Duplicate item: Additional DNA requested C3L-01864.WXS.N C3L-01864 UCEC WXS blood_normal CPT0093840002 CPT0093840002.WholeExome.RP-1303.bam 32526733430 BAM NA d93ada75-e013-4c14-9945-0a8dde071738 09a5b854eeb821aa15211636d5021587 hg19 Blood Derived Normal C3L-01864-31 C3L-01864.WXS.N.hg38 C3L-01864 UCEC WXS blood_normal CPT0093840002 ebcd3c59-6e3a-4913-8bc4-50fe264a0f67_wxs_gdc_realn.bam 44181681486 BAM NA 12f4261d-c0e1-4088-8f69-003acb306e5a 8c8ec4f147d1c4a1648bf011bb3a2d9a hg38 Blood Derived Normal C3L-01864-31 -C3L-01864.WXS.T C3L-01864 UCEC WXS tumor CPT0092860009 CPT0092860009.WholeExome.RP-1303.bam 49492814707 BAM NA 06b1e0d9-a81e-4fc8-b99a-f44330cac9e7 42042f257a742cb5d10c5d1c10c7c168 hg19 Primary Tumor C3L-01864-02 -C3L-01864.WXS.T.hg38 C3L-01864 UCEC WXS tumor CPT0092860009 31aa7828-c230-4711-a349-8bf53fd585a3_wxs_gdc_realn.bam 67184302768 BAM NA f931272e-d6b4-4528-9ae0-d0c0b4bf2607 188a5270182a447b69c9b2c7095b843d hg38 Primary Tumor C3L-01864-02 +C3L-01864.WXS.T.ADNA_rlO8jw C3L-01864 UCEC WXS tumor CPT0092860009 CPT0092860009.WholeExome.RP-1303.bam 49492814707 BAM NA 06b1e0d9-a81e-4fc8-b99a-f44330cac9e7 42042f257a742cb5d10c5d1c10c7c168 hg19 Primary Tumor C3L-01864-02 additional_DNA ADNA_rlO8jw Duplicate item: Additional DNA requested +C3L-01864.WXS.T.ADNA_rlO8jw.hg38 C3L-01864 UCEC WXS tumor CPT0092860009 31aa7828-c230-4711-a349-8bf53fd585a3_wxs_gdc_realn.bam 67184302768 BAM NA f931272e-d6b4-4528-9ae0-d0c0b4bf2607 188a5270182a447b69c9b2c7095b843d hg38 Primary Tumor C3L-01864-02 additional_DNA ADNA_rlO8jw Duplicate item: Additional DNA requested C3L-01869.MethArray.Green.T C3L-01869 CCRCC Methylation Array tumor CPT0104250009 202234370086_R05C01_Grn.idat 13676231 IDAT Green f4768230-8e2d-4fb1-9e53-2071321b17af 0ebecaffb99dad9b6ba3f8418220f117 NA Primary Tumor C3L-01869-02 C3L-01869.MethArray.Red.T C3L-01869 CCRCC Methylation Array tumor CPT0104250009 202234370086_R05C01_Red.idat 13676231 IDAT Red 22baa7c0-a0bb-47ae-97b8-e646105cfb72 9f09fae744d33c3c3133d9194080a49c NA Primary Tumor C3L-01869-02 C3L-01869.miRNA-Seq.A C3L-01869 CCRCC miRNA-Seq tissue_normal CPT0104270009 181119_UNC31-K00269_0165_AH27WCBBXY_AGTCAA_S37_L002_R1_001.unaln.bam 224640156 BAM NA b58c4bf7-c9bf-4a4f-805d-fa9431ff031f 403c3ae49a29e4cb6f2a1cc5d2a6bc7b NA Solid Tissue Normal C3L-01869-06 @@ -8345,8 +8347,8 @@ C3L-02170.WXS.N C3L-02170 LSCC WXS blood_normal CPT0175640002 CPT0175640002.Whol C3L-02170.WXS.N.hg38 C3L-02170 LSCC WXS blood_normal CPT0175640002 dd54f8e5-09cc-4925-86e5-797f029e52cb_wxs_gdc_realn.bam 26757263345 BAM NA bbf1978b-1db4-4656-a991-70479d05d1f6 4c3b13d0d7c575ed56f7e586dc5bd580 hg38 Blood Derived Normal C3L-02170-31 C3L-02170.WXS.T C3L-02170 LSCC WXS tumor CPT0175560006 CPT0175560006.WholeExome.RP-1303.bam 29024736524 BAM NA 3c7cc608-1008-47c5-bff2-2b3f81cce2e1 f2ecdde9aa4537c9eda9275b8d6d81a6 hg19 Primary Tumor C3L-02170-03 C3L-02170.WXS.T.hg38 C3L-02170 LSCC WXS tumor CPT0175560006 5222af15-8276-44d6-927e-e46b9d44f28d_wxs_gdc_realn.bam 40442856125 BAM NA 4fd70b41-4cd0-4908-9142-5a155538ff12 c51b14a5303eabbccb20cee25ab634f7 hg38 Primary Tumor C3L-02170-03 -C3L-02175.MethArray.Green.T C3L-02175 CCRCC Methylation Array tumor CPT0100410009 203219650217_R06C01_Grn.idat 13676216 IDAT Green c73f197d-5d99-493f-adfc-dbea318d2d16 a742c9cea44853f0a60802529202029d NA Primary Tumor C3L-02175-01 -C3L-02175.MethArray.Red.T C3L-02175 CCRCC Methylation Array tumor CPT0100410009 203219650217_R06C01_Red.idat 13676216 IDAT Red b7bfefdf-b8fc-4145-9e29-9aeebf923c02 f23b16fc12038ed2c4065713c80ffd0b NA Primary Tumor C3L-02175-01 +C3L-02175.MethArray.Green.T.ADNA_rGO344 C3L-02175 CCRCC Methylation Array tumor CPT0100410009 203219650217_R06C01_Grn.idat 13676216 IDAT Green c73f197d-5d99-493f-adfc-dbea318d2d16 a742c9cea44853f0a60802529202029d NA Primary Tumor C3L-02175-01 additional_DNA ADNA_rGO344 Duplicate item: Additional DNA requested +C3L-02175.MethArray.Red.T.ADNA_rGO344 C3L-02175 CCRCC Methylation Array tumor CPT0100410009 203219650217_R06C01_Red.idat 13676216 IDAT Red b7bfefdf-b8fc-4145-9e29-9aeebf923c02 f23b16fc12038ed2c4065713c80ffd0b NA Primary Tumor C3L-02175-01 additional_DNA ADNA_rGO344 Duplicate item: Additional DNA requested C3L-02175.miRNA-Seq.T C3L-02175 CCRCC miRNA-Seq tumor CPT0100410006 180828_UNC32-K00270_0112_AHWTLNBBXX_ACTGAT_S25_L007_R1_001.unaln.bam 342586292 BAM NA 211c7236-a41f-4447-a5bf-b9567bf60077 6737ad8177d768f81ce3df2c97afb267 NA Primary Tumor C3L-02175-01 C3L-02175.miRNA-Seq.T.hg38 C3L-02175 CCRCC miRNA-Seq tumor CPT0100410006 b2cf64ca-e527-4ca1-95be-a369faefa578_mirnaseq_gdc_realn.bam 384369823 BAM NA 29720da5-ae6c-4636-a1e6-ed6e59aa118b 2bc4fc41ac0318013f69c84c0cf2bc87 hg38 Primary Tumor C3L-02175-01 C3L-02175.RNA-Seq.chimeric.T.hg38 C3L-02175 CCRCC RNA-Seq tumor CPT0100410006 8e171396-fc55-4261-89f2-b9268f2c91d3.rna_seq.chimeric.gdc_realn.bam 42539047 BAM chimeric 599c4076-a675-4e8e-a37c-0c45c5240f66 e09b6f4fa38e1ef3dda42f3285f66a82 hg38 Primary Tumor C3L-02175-01 @@ -8356,12 +8358,12 @@ C3L-02175.RNA-Seq.R2.T C3L-02175 CCRCC RNA-Seq tumor CPT0100410006 171129_UNC32- C3L-02175.RNA-Seq.transcriptome.T.hg38 C3L-02175 CCRCC RNA-Seq tumor CPT0100410006 8e171396-fc55-4261-89f2-b9268f2c91d3.rna_seq.transcriptome.gdc_realn.bam 9632835285 BAM transcriptome 1b1371c2-efcf-4f7b-888d-95a3c45cbe07 fe4414c10492326049bf1e6260efe134 hg38 Primary Tumor C3L-02175-01 C3L-02175.WGS.N C3L-02175 CCRCC WGS blood_normal CPT0101930002 CPT0101930002.WholeGenome.RP-1303.bam 66291160337 BAM NA fb934f0d-1915-4149-a67d-0bdd65fa6cb9 6fe20d0bc233be67453ec96e7496e725 hg19 Blood Derived Normal C3L-02175-31 C3L-02175.WGS.N.hg38 C3L-02175 CCRCC WGS blood_normal CPT0101930002 6eadb488-015f-427c-8194-9709dff9facf_wgs_gdc_realn.bam 97648522008 BAM NA 0bff2363-4079-4835-9e0b-b698ece29edc cc0bfa8286f89a57eaa398108812d0cc hg38 Blood Derived Normal C3L-02175-31 -C3L-02175.WGS.T C3L-02175 CCRCC WGS tumor CPT0100410009 CPT0100410009.WholeGenome.RP-1303.bam 56642132340 BAM NA 490dffaf-67a4-4bfe-82d1-1caf85c4dead 2db3cedb7e7ee031a8a0431f21698df1 hg19 Primary Tumor C3L-02175-01 -C3L-02175.WGS.T.hg38 C3L-02175 CCRCC WGS tumor CPT0100410009 573d770d-55a6-413b-874b-444f2bff1b31_wgs_gdc_realn.bam 83424429662 BAM NA 71aa6238-f9f2-4374-a406-c192e6ed0154 2d000c55fb30017d3083f516535b9c70 hg38 Primary Tumor C3L-02175-01 +C3L-02175.WGS.T.ADNA_rGO344 C3L-02175 CCRCC WGS tumor CPT0100410009 CPT0100410009.WholeGenome.RP-1303.bam 56642132340 BAM NA 490dffaf-67a4-4bfe-82d1-1caf85c4dead 2db3cedb7e7ee031a8a0431f21698df1 hg19 Primary Tumor C3L-02175-01 additional_DNA ADNA_rGO344 Duplicate item: Additional DNA requested +C3L-02175.WGS.T.ADNA_rGO344.hg38 C3L-02175 CCRCC WGS tumor CPT0100410009 573d770d-55a6-413b-874b-444f2bff1b31_wgs_gdc_realn.bam 83424429662 BAM NA 71aa6238-f9f2-4374-a406-c192e6ed0154 2d000c55fb30017d3083f516535b9c70 hg38 Primary Tumor C3L-02175-01 additional_DNA ADNA_rGO344 Duplicate item: Additional DNA requested C3L-02175.WXS.N C3L-02175 CCRCC WXS blood_normal CPT0101930002 CPT0101930002.WholeExome.RP-1303.bam 30616433475 BAM NA d5784d20-2151-473f-8e4c-b7bf553217d3 4d1e45f9e7c6157fcafff0a3ef3b35f1 hg19 Blood Derived Normal C3L-02175-31 C3L-02175.WXS.N.hg38 C3L-02175 CCRCC WXS blood_normal CPT0101930002 6eadb488-015f-427c-8194-9709dff9facf_wxs_gdc_realn.bam 42288858151 BAM NA f6570ece-999f-4dcf-9dbe-253a821240af 1a9135e7ef877997486b1ccc48b8bec1 hg38 Blood Derived Normal C3L-02175-31 -C3L-02175.WXS.T C3L-02175 CCRCC WXS tumor CPT0100410009 CPT0100410009.WholeExome.RP-1303.bam 33972199619 BAM NA d928773d-767a-46c3-8c6d-bb6f95f4da3f 9fcf4411d17a7118592c2402c0857df7 hg19 Primary Tumor C3L-02175-01 -C3L-02175.WXS.T.hg38 C3L-02175 CCRCC WXS tumor CPT0100410009 573d770d-55a6-413b-874b-444f2bff1b31_wxs_gdc_realn.bam 47301558950 BAM NA 3e4b4d1b-be24-459c-8fcf-1e464a8912df d07d5032e89fa2ba0e5d959fad934ef2 hg38 Primary Tumor C3L-02175-01 +C3L-02175.WXS.T.ADNA_rGO344 C3L-02175 CCRCC WXS tumor CPT0100410009 CPT0100410009.WholeExome.RP-1303.bam 33972199619 BAM NA d928773d-767a-46c3-8c6d-bb6f95f4da3f 9fcf4411d17a7118592c2402c0857df7 hg19 Primary Tumor C3L-02175-01 additional_DNA ADNA_rGO344 Duplicate item: Additional DNA requested +C3L-02175.WXS.T.ADNA_rGO344.hg38 C3L-02175 CCRCC WXS tumor CPT0100410009 573d770d-55a6-413b-874b-444f2bff1b31_wxs_gdc_realn.bam 47301558950 BAM NA 3e4b4d1b-be24-459c-8fcf-1e464a8912df d07d5032e89fa2ba0e5d959fad934ef2 hg38 Primary Tumor C3L-02175-01 additional_DNA ADNA_rGO344 Duplicate item: Additional DNA requested C3L-02176.MethArray.Green.T C3L-02176 CCRCC Methylation Array tumor CPT0100470008 202234380054_R06C01_Grn.idat 13676231 IDAT Green f9d464ef-b36a-445e-b213-fe57694e7402 d651258b3eba58c29159d45008ed2490 NA Primary Tumor C3L-02176-01 C3L-02176.MethArray.Red.T C3L-02176 CCRCC Methylation Array tumor CPT0100470008 202234380054_R06C01_Red.idat 13676231 IDAT Red cc4a846f-04a4-444b-9cae-bb1be625df4a e1c577bfeda95a839efbcd5a6ac6a2ea NA Primary Tumor C3L-02176-01 C3L-02176.miRNA-Seq.T C3L-02176 CCRCC miRNA-Seq tumor CPT0100470006 181113_UNC31-K00269_0164_AH23NNBBXY_CTATAC_S15_L003_R1_001.unaln.bam 214036121 BAM NA 684b9f05-6909-4722-b949-311d3181b02b a47ce2109376b9d19ae2e0c6c215912c NA Primary Tumor C3L-02176-01 @@ -9889,41 +9891,41 @@ C3L-02616.WXS.N C3L-02616 LUAD WXS blood_normal CPT0192360002 CPT0192360002.Whol C3L-02616.WXS.N.hg38 C3L-02616 LUAD WXS blood_normal CPT0192360002 d2a915e5-6de2-452f-a014-29804e731a73_wxs_gdc_realn.bam 39952620826 BAM NA 722af924-f5aa-4616-bb20-ab9ac54fca4e 18772626aa29fbcda3a96af30b8e9c95 hg38 Blood Derived Normal C3L-02616-31 C3L-02616.WXS.T C3L-02616 LUAD WXS tumor CPT0192240006 CPT0192240006.WholeExome.RP-1303.bam 22298548125 BAM NA c3c4d92e-8dab-4564-a3fa-5770024357bf ad229265ccd67d9696dc5ce22bb5a37f hg19 Primary Tumor C3L-02616-05 C3L-02616.WXS.T.hg38 C3L-02616 LUAD WXS tumor CPT0192240006 5168a152-2084-4c61-ab12-1602325fe82e_wxs_gdc_realn.bam 30673050729 BAM NA c2bb57ca-10e0-4ce2-b232-c9089a6b75c0 cff5930fbf3a49e7fc7767c97d8c2892 hg38 Primary Tumor C3L-02616-05 -C3L-02617.MethArray.Green.T C3L-02617 HNSCC Methylation Array tumor CPT0229190006 203561620080_R04C01_Grn.idat 13676226 IDAT Green 6b149790-8fea-4d6f-893f-e3ccf62a8023 c79895fa3fa771b5caef4f0be5049386 NA Primary Tumor C3L-02617-03 -C3L-02617.MethArray.Red.T C3L-02617 HNSCC Methylation Array tumor CPT0229190006 203561620080_R04C01_Red.idat 13676226 IDAT Red 919a4eda-47e0-42e3-b458-a0937502a17f 84417d7d1ab09a1352e5e12e8fb40492 NA Primary Tumor C3L-02617-03 +C3L-02617.MethArray.Green.T.RDNA_o2mjl6L C3L-02617 HNSCC Methylation Array tumor CPT0229190006 203561620080_R04C01_Grn.idat 13676226 IDAT Green 6b149790-8fea-4d6f-893f-e3ccf62a8023 c79895fa3fa771b5caef4f0be5049386 NA Primary Tumor C3L-02617-03 replacement_DNA RDNA_o2mjl6L Duplicate item: Replacement DNA Distribution - original aliquot failed +C3L-02617.MethArray.Red.T.RDNA_o2mjl6L C3L-02617 HNSCC Methylation Array tumor CPT0229190006 203561620080_R04C01_Red.idat 13676226 IDAT Red 919a4eda-47e0-42e3-b458-a0937502a17f 84417d7d1ab09a1352e5e12e8fb40492 NA Primary Tumor C3L-02617-03 replacement_DNA RDNA_o2mjl6L Duplicate item: Replacement DNA Distribution - original aliquot failed C3L-02617.miRNA-Seq.A C3L-02617 HNSCC miRNA-Seq tissue_normal CPT0229230009 190228_UNC32-K00270_0151_AHYLY3BBXX_AGTTCC_S14_L005_R1_001.unaln.bam 224526015 BAM NA 9b503fdc-dae7-4322-bc41-6e04b95ba99b aa0f966ae0edc0b6103fe5e2e0148941 NA Solid Tissue Normal C3L-02617-07 C3L-02617.miRNA-Seq.A.hg38 C3L-02617 HNSCC miRNA-Seq tissue_normal CPT0229230009 f8f27eda-38a0-4ab1-ad8a-4c2d01cde5b0_mirnaseq_gdc_realn.bam 254080034 BAM NA 8dbad6c5-cbd5-4abc-86fc-1bf65e357179 fe6672a082eb5ec49e88986ef4cbe598 hg38 Solid Tissue Normal C3L-02617-07 -C3L-02617.miRNA-Seq.T C3L-02617 HNSCC miRNA-Seq tumor CPT0229190013 190813_UNC32-K00270_0196_AH5MCWBBXY_CTCAGA_S1_L003_R1_001.unaln.bam 194995967 BAM NA 6985e64f-d826-43cb-bd39-04705ca07137 45331cebf8ed620f32d37f20b80ef117 NA Primary Tumor C3L-02617-03 C3L-02617.miRNA-Seq.T.deprecated C3L-02617 HNSCC miRNA-Seq tumor CPT0229210013 190228_UNC32-K00270_0151_AHYLY3BBXX_CTATAC_S39_L004_R1_001.unaln.bam 250526579 BAM NA 15dd9fb0-1a2c-4052-810d-7f8b00e536d6 81cf79743189c865253c4396541211ea NA Primary Tumor C3L-02617-05 .deprecated -C3L-02617.miRNA-Seq.T.hg38 C3L-02617 HNSCC miRNA-Seq tumor CPT0229190013 6f91627e-ca9e-47f5-a369-f58dd2dee548_mirnaseq_gdc_realn.bam 222873051 BAM NA 7a3000b0-259f-4c26-aa89-2a6e0b961b7f 3ea9f25736f12763fe3585ef08a9133e hg38 Primary Tumor C3L-02617-03 C3L-02617.miRNA-Seq.T.hg38.deprecated C3L-02617 HNSCC miRNA-Seq tumor CPT0229210013 364af1f6-2f1e-4baf-8e1a-913f66e2317d_mirnaseq_gdc_realn.bam 278624000 BAM NA 0f83e4d1-4ab1-4b79-be70-426f5c20a2aa 63f1b66350ff515285e4d950f62c3c8b hg38 Primary Tumor C3L-02617-05 .deprecated +C3L-02617.miRNA-Seq.T.RRNA_yPz9yJR C3L-02617 HNSCC miRNA-Seq tumor CPT0229190013 190813_UNC32-K00270_0196_AH5MCWBBXY_CTCAGA_S1_L003_R1_001.unaln.bam 194995967 BAM NA 6985e64f-d826-43cb-bd39-04705ca07137 45331cebf8ed620f32d37f20b80ef117 NA Primary Tumor C3L-02617-03 replacement_RNA RRNA_yPz9yJR Duplicate item: Replacement RNA Distribution - original aliquot failed +C3L-02617.miRNA-Seq.T.RRNA_yPz9yJR.hg38 C3L-02617 HNSCC miRNA-Seq tumor CPT0229190013 6f91627e-ca9e-47f5-a369-f58dd2dee548_mirnaseq_gdc_realn.bam 222873051 BAM NA 7a3000b0-259f-4c26-aa89-2a6e0b961b7f 3ea9f25736f12763fe3585ef08a9133e hg38 Primary Tumor C3L-02617-03 replacement_RNA RRNA_yPz9yJR Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-02617.RNA-Seq.chimeric.A.hg38 C3L-02617 HNSCC RNA-Seq tissue_normal CPT0229230009 5dd46878-4dc6-4652-9d79-e4aefc65324e.rna_seq.chimeric.gdc_realn.bam 33325913 BAM chimeric 89bf8409-53a6-4226-b8cd-923ecbe682db 6570e4168d9bf51cee6e2e57d371fbc8 hg38 Solid Tissue Normal C3L-02617-07 -C3L-02617.RNA-Seq.chimeric.T.hg38 C3L-02617 HNSCC RNA-Seq tumor CPT0229190013 17194f4b-1bcc-4544-a8ae-6cc7b07cac28.rna_seq.chimeric.gdc_realn.bam 38809440 BAM chimeric 1dc56e49-4986-4b6a-991d-29c5c029220f 54f355f5edb11a41a2df23b629c5c917 hg38 Primary Tumor C3L-02617-03 C3L-02617.RNA-Seq.chimeric.T.hg38.deprecated C3L-02617 HNSCC RNA-Seq tumor CPT0229210013 66d7c72a-4c52-4c59-ab64-e942307ca90a.rna_seq.chimeric.gdc_realn.bam 220011617 BAM chimeric cc432c06-d4b9-472e-a90d-3d9c071f24a5 c1cb715cda77c85f1cd43f4cbb2cd774 hg38 Primary Tumor C3L-02617-05 .deprecated +C3L-02617.RNA-Seq.chimeric.T.RRNA_yPz9yJR.hg38 C3L-02617 HNSCC RNA-Seq tumor CPT0229190013 17194f4b-1bcc-4544-a8ae-6cc7b07cac28.rna_seq.chimeric.gdc_realn.bam 38809440 BAM chimeric 1dc56e49-4986-4b6a-991d-29c5c029220f 54f355f5edb11a41a2df23b629c5c917 hg38 Primary Tumor C3L-02617-03 replacement_RNA RRNA_yPz9yJR Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-02617.RNA-Seq.genomic.A.hg38 C3L-02617 HNSCC RNA-Seq tissue_normal CPT0229230009 5dd46878-4dc6-4652-9d79-e4aefc65324e.rna_seq.genomic.gdc_realn.bam 9758360369 BAM genomic 9918c43c-3478-41e3-b082-8a1b236601c7 c4592536fec7b28015d31d30bedff129 hg38 Solid Tissue Normal C3L-02617-07 -C3L-02617.RNA-Seq.genomic.T.hg38 C3L-02617 HNSCC RNA-Seq tumor CPT0229190013 17194f4b-1bcc-4544-a8ae-6cc7b07cac28.rna_seq.genomic.gdc_realn.bam 8358219554 BAM genomic 964de801-c59c-4247-83ba-cd458c475109 13e29055293ab7047eb1314c09bfbb3d hg38 Primary Tumor C3L-02617-03 C3L-02617.RNA-Seq.genomic.T.hg38.deprecated C3L-02617 HNSCC RNA-Seq tumor CPT0229210013 66d7c72a-4c52-4c59-ab64-e942307ca90a.rna_seq.genomic.gdc_realn.bam 8077756145 BAM genomic a4d8e9e5-64aa-46de-ba0b-7367c9b4a786 ae416fc09bbb3b908860f5271f6c76e1 hg38 Primary Tumor C3L-02617-05 .deprecated +C3L-02617.RNA-Seq.genomic.T.RRNA_yPz9yJR.hg38 C3L-02617 HNSCC RNA-Seq tumor CPT0229190013 17194f4b-1bcc-4544-a8ae-6cc7b07cac28.rna_seq.genomic.gdc_realn.bam 8358219554 BAM genomic 964de801-c59c-4247-83ba-cd458c475109 13e29055293ab7047eb1314c09bfbb3d hg38 Primary Tumor C3L-02617-03 replacement_RNA RRNA_yPz9yJR Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-02617.RNA-Seq.R1.A C3L-02617 HNSCC RNA-Seq tissue_normal CPT0229230009 190411_UNC31-K00269_0208_BH3W3KBBXY_TTGGACTC-GGAAGCAG_S26_L006_R1_001.fastq.gz 4477762836 FASTQ NA 30658b7a-8b8f-4c36-a0c7-1981c39b600c 077a8c5ebd1305a4b65046110437d976 NA Solid Tissue Normal C3L-02617-07 -C3L-02617.RNA-Seq.R1.T C3L-02617 HNSCC RNA-Seq tumor CPT0229190013 190702_UNC32-K00270_0188_BH7CLJBBXY_CCGTGAAG-CAGTGGAT_S18_L005_R1_001.fastq.gz 3718849103 FASTQ NA 512e18e5-4302-4930-b8c2-71a44520f21a 85faf4c07b1bc96a5f0a43edbfe423a7 NA Primary Tumor C3L-02617-03 C3L-02617.RNA-Seq.R1.T.deprecated C3L-02617 HNSCC RNA-Seq tumor CPT0229210013 190328_UNC31-K00269_0204_BH5F5NBBXY_ATGTCA_S1_L001_R1_001.fastq.gz 3774086677 FASTQ NA 22f265ef-073e-4439-a182-721b1e73ae87 20857bfdc82634d4dff13daf5b027e94 NA Primary Tumor C3L-02617-05 .deprecated +C3L-02617.RNA-Seq.R1.T.RRNA_yPz9yJR C3L-02617 HNSCC RNA-Seq tumor CPT0229190013 190702_UNC32-K00270_0188_BH7CLJBBXY_CCGTGAAG-CAGTGGAT_S18_L005_R1_001.fastq.gz 3718849103 FASTQ NA 512e18e5-4302-4930-b8c2-71a44520f21a 85faf4c07b1bc96a5f0a43edbfe423a7 NA Primary Tumor C3L-02617-03 replacement_RNA RRNA_yPz9yJR Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-02617.RNA-Seq.R2.A C3L-02617 HNSCC RNA-Seq tissue_normal CPT0229230009 190411_UNC31-K00269_0208_BH3W3KBBXY_TTGGACTC-GGAAGCAG_S26_L006_R2_001.fastq.gz 4982512000 FASTQ NA bb027e79-b3eb-4ff4-bdce-b8923531ff38 7f5a640e2d332c23b19d47a3cb81d562 NA Solid Tissue Normal C3L-02617-07 -C3L-02617.RNA-Seq.R2.T C3L-02617 HNSCC RNA-Seq tumor CPT0229190013 190702_UNC32-K00270_0188_BH7CLJBBXY_CCGTGAAG-CAGTGGAT_S18_L005_R2_001.fastq.gz 4080947936 FASTQ NA 0dfc04ea-3414-43e6-8ab5-b956c15f5b74 983cb0098c28e2801b1c74f03ae9fe52 NA Primary Tumor C3L-02617-03 C3L-02617.RNA-Seq.R2.T.deprecated C3L-02617 HNSCC RNA-Seq tumor CPT0229210013 190328_UNC31-K00269_0204_BH5F5NBBXY_ATGTCA_S1_L001_R2_001.fastq.gz 4195303625 FASTQ NA a6870dad-b2e8-4229-90dc-a984d0e301ac d69252db560ff05d31b0f62212f7118d NA Primary Tumor C3L-02617-05 .deprecated +C3L-02617.RNA-Seq.R2.T.RRNA_yPz9yJR C3L-02617 HNSCC RNA-Seq tumor CPT0229190013 190702_UNC32-K00270_0188_BH7CLJBBXY_CCGTGAAG-CAGTGGAT_S18_L005_R2_001.fastq.gz 4080947936 FASTQ NA 0dfc04ea-3414-43e6-8ab5-b956c15f5b74 983cb0098c28e2801b1c74f03ae9fe52 NA Primary Tumor C3L-02617-03 replacement_RNA RRNA_yPz9yJR Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-02617.RNA-Seq.transcriptome.A.hg38 C3L-02617 HNSCC RNA-Seq tissue_normal CPT0229230009 5dd46878-4dc6-4652-9d79-e4aefc65324e.rna_seq.transcriptome.gdc_realn.bam 12076326572 BAM transcriptome 195e4de5-bca0-45ec-a391-a34dd0235040 f53ab3f56308ce354ce3dc1672e1338f hg38 Solid Tissue Normal C3L-02617-07 -C3L-02617.RNA-Seq.transcriptome.T.hg38 C3L-02617 HNSCC RNA-Seq tumor CPT0229190013 17194f4b-1bcc-4544-a8ae-6cc7b07cac28.rna_seq.transcriptome.gdc_realn.bam 7746842242 BAM transcriptome a60acf6e-7c8e-4907-bd23-a89be6a85c46 a58d56402de1250d5874b257b4bce694 hg38 Primary Tumor C3L-02617-03 C3L-02617.RNA-Seq.transcriptome.T.hg38.deprecated C3L-02617 HNSCC RNA-Seq tumor CPT0229210013 66d7c72a-4c52-4c59-ab64-e942307ca90a.rna_seq.transcriptome.gdc_realn.bam 8766560815 BAM transcriptome aa0bd959-57b6-426b-ac06-67c089d53048 b11402f6b2d636ceeadb8c203c021de7 hg38 Primary Tumor C3L-02617-05 .deprecated +C3L-02617.RNA-Seq.transcriptome.T.RRNA_yPz9yJR.hg38 C3L-02617 HNSCC RNA-Seq tumor CPT0229190013 17194f4b-1bcc-4544-a8ae-6cc7b07cac28.rna_seq.transcriptome.gdc_realn.bam 7746842242 BAM transcriptome a60acf6e-7c8e-4907-bd23-a89be6a85c46 a58d56402de1250d5874b257b4bce694 hg38 Primary Tumor C3L-02617-03 replacement_RNA RRNA_yPz9yJR Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-02617.WGS.N C3L-02617 HNSCC WGS blood_normal CPT0229330002 CPT0229330002.WholeGenome.RP-1303.bam 50029662993 BAM NA fada43cc-f22c-4626-8c7b-6de4b436c304 45fb182cf05bcc89a7f71b1b08d01030 hg19 Blood Derived Normal C3L-02617-31 C3L-02617.WGS.N.hg38 C3L-02617 HNSCC WGS blood_normal CPT0229330002 f13bac4a-9644-49b5-b293-9a1c7bbc403f_wgs_gdc_realn.bam 75722880431 BAM NA 417dfe70-1bfe-4de0-930c-61ffe8b20253 e10be1a2c947ecb5083cd0df637b57c8 hg38 Blood Derived Normal C3L-02617-31 -C3L-02617.WGS.T C3L-02617 HNSCC WGS tumor CPT0229190006 CPT0229190006.WholeGenome.RP-1303.bam 76422429885 BAM NA f4a7039d-7d60-447e-817b-928d0c7056ea 3b00e13ceb72e7c2f7464c4af3c9bbe4 hg19 Primary Tumor C3L-02617-03 -C3L-02617.WGS.T.hg38 C3L-02617 HNSCC WGS tumor CPT0229190006 be017248-e1fd-45fd-b185-d0e102ada4e8_wgs_gdc_realn.bam 110729474179 BAM NA 90464380-6f65-439f-9566-28df2137ae7a 0fe1851bc21fd9847639252d5006e6a3 hg38 Primary Tumor C3L-02617-03 +C3L-02617.WGS.T.RDNA_o2mjl6L C3L-02617 HNSCC WGS tumor CPT0229190006 CPT0229190006.WholeGenome.RP-1303.bam 76422429885 BAM NA f4a7039d-7d60-447e-817b-928d0c7056ea 3b00e13ceb72e7c2f7464c4af3c9bbe4 hg19 Primary Tumor C3L-02617-03 replacement_DNA RDNA_o2mjl6L Duplicate item: Replacement DNA Distribution - original aliquot failed +C3L-02617.WGS.T.RDNA_o2mjl6L.hg38 C3L-02617 HNSCC WGS tumor CPT0229190006 be017248-e1fd-45fd-b185-d0e102ada4e8_wgs_gdc_realn.bam 110729474179 BAM NA 90464380-6f65-439f-9566-28df2137ae7a 0fe1851bc21fd9847639252d5006e6a3 hg38 Primary Tumor C3L-02617-03 replacement_DNA RDNA_o2mjl6L Duplicate item: Replacement DNA Distribution - original aliquot failed C3L-02617.WXS.A C3L-02617 HNSCC WXS tissue_normal CPT0229230006 CPT0229230006.WholeExome.RP-1303.bam 46156720375 BAM NA b0093ea5-0716-4bcf-9758-d9851527e6f4 aa17079049b6249855452d69a28fa14c hg19 Solid Tissue Normal C3L-02617-07 C3L-02617.WXS.A.hg38 C3L-02617 HNSCC WXS tissue_normal CPT0229230006 7e68c738-9217-4634-a60c-6a6be4c42cf5_wxs_gdc_realn.bam 64621180276 BAM NA 6bbdbe79-7db3-4099-bb10-fc7ba272de70 6662e6acc7d060dcdafb8a19bebd1a7e hg38 Solid Tissue Normal C3L-02617-07 C3L-02617.WXS.N.hg38.high_cov C3L-02617 HNSCC WXS blood_normal CPT0229330002 f13bac4a-9644-49b5-b293-9a1c7bbc403f_wxs_gdc_realn.bam 54963054270 BAM NA bd478f09-96b6-4479-87ad-2566ff4b5377 35a038c8491d82fb43810360f9bca771 hg38 Blood Derived Normal C3L-02617-31 .high_cov C3L-02617.WXS.N.high_cov C3L-02617 HNSCC WXS blood_normal CPT0229330002 CPT0229330002.WholeExome.RP-1303.bam 39358382853 BAM NA cc419156-538f-48fe-9873-86d271221c58 26569e883a51faee3d65552bde8e7892 hg19 Blood Derived Normal C3L-02617-31 .high_cov -C3L-02617.WXS.T C3L-02617 HNSCC WXS tumor CPT0229190006 CPT0229190006.WholeExome.RP-1303.bam 23384774724 BAM NA e27459b4-e79e-4f9e-a6a1-76c46f45868f 8b527fa50e5b80ab62a47399effb4e7a hg19 Primary Tumor C3L-02617-03 C3L-02617.WXS.T.deprecated C3L-02617 HNSCC WXS tumor CPT0229210006 CPT0229210006.WholeExome.RP-1303.bam 27537830974 BAM NA 0825e012-f875-4cb1-aeaa-6e7c1872e31a e1c57bded9878bc61749117b049114f4 hg19 Primary Tumor C3L-02617-05 .deprecated -C3L-02617.WXS.T.hg38 C3L-02617 HNSCC WXS tumor CPT0229190006 be017248-e1fd-45fd-b185-d0e102ada4e8_wxs_gdc_realn.bam 31873820322 BAM NA 8fc8a057-c842-4ff3-bf06-39b309a28350 7d95082bfb9ac955694b55a9c295efaa hg38 Primary Tumor C3L-02617-03 C3L-02617.WXS.T.hg38.deprecated C3L-02617 HNSCC WXS tumor CPT0229210006 7108d886-a0a3-4788-89e9-012b85c92096_wxs_gdc_realn.bam 38089035477 BAM NA eea4be0d-4175-4494-8ee4-da7073b51867 2899cd3643f944622613250864498ee5 hg38 Primary Tumor C3L-02617-05 .deprecated +C3L-02617.WXS.T.RDNA_o2mjl6L C3L-02617 HNSCC WXS tumor CPT0229190006 CPT0229190006.WholeExome.RP-1303.bam 23384774724 BAM NA e27459b4-e79e-4f9e-a6a1-76c46f45868f 8b527fa50e5b80ab62a47399effb4e7a hg19 Primary Tumor C3L-02617-03 replacement_DNA RDNA_o2mjl6L Duplicate item: Replacement DNA Distribution - original aliquot failed +C3L-02617.WXS.T.RDNA_o2mjl6L.hg38 C3L-02617 HNSCC WXS tumor CPT0229190006 be017248-e1fd-45fd-b185-d0e102ada4e8_wxs_gdc_realn.bam 31873820322 BAM NA 8fc8a057-c842-4ff3-bf06-39b309a28350 7d95082bfb9ac955694b55a9c295efaa hg38 Primary Tumor C3L-02617-03 replacement_DNA RDNA_o2mjl6L Duplicate item: Replacement DNA Distribution - original aliquot failed C3L-02618.MethArray.Green.A C3L-02618 LSCC Methylation Array tissue_normal CPT0241840006 204367490082_R07C01_Grn.idat 13677900 IDAT Green f99fe07c-5694-4137-aa6f-996a00aa1a4b f480d3901fa0bb2cc3fd4f71b916202f NA Solid Tissue Normal C3L-02618-08 C3L-02618.MethArray.Green.T C3L-02618 LSCC Methylation Array tumor CPT0241660006 204372030022_R05C01_Grn.idat 13677905 IDAT Green 4c3d8378-b7f3-4c17-949f-10edf483332c 5daac775565654639bd1ce02c84d3c8b NA Primary Tumor C3L-02618-04 C3L-02618.MethArray.Red.A C3L-02618 LSCC Methylation Array tissue_normal CPT0241840006 204367490082_R07C01_Red.idat 13677900 IDAT Red 0e69ebb6-a9de-47d8-99bf-d76da96ae44d d013be9021b95722b18f08bfc386a95e NA Solid Tissue Normal C3L-02618-08 @@ -10833,6 +10835,8 @@ C3L-02857.WXS.N C3L-02857 CCRCC WXS blood_normal CPT0204060002 CPT0204060002.Who C3L-02857.WXS.N.hg38 C3L-02857 CCRCC WXS blood_normal CPT0204060002 3f93cb69-6a59-4f4a-a5f2-fe98ebf17dd0_wxs_gdc_realn.bam 25851946346 BAM NA af99eac9-ea5a-4e28-a8b0-8812d904bda4 1d2a4a3b24e362c58564b7bb4d6278d4 hg38 Blood Derived Normal C3L-02857-31 C3L-02857.WXS.T C3L-02857 CCRCC WXS tumor CPT0203410006 CPT0203410006.WholeExome.RP-1303.bam 29954298793 BAM NA 6d00c072-dfb5-4f05-afae-44005dfe9be9 bbe0ad2ae3365f75e14d4747163069c0 hg19 Primary Tumor C3L-02857-01 C3L-02857.WXS.T.hg38 C3L-02857 CCRCC WXS tumor CPT0203410006 fffbf591-33c9-45e6-868a-9b7ec881d315_wxs_gdc_realn.bam 41745966797 BAM NA 91d96a04-c7f3-4a2c-bfed-41e8e2b86436 d5fdd96c1542f4c574fc51ebd014e821 hg38 Primary Tumor C3L-02857-01 +C3L-02888.RNA-Seq.R1.T C3L-02888 PDA RNA-Seq tumor CPT0166540026 200807_UNC32-K00270_0255_AHHY2WBBXY_ATTGTGAA-TGCATTGC_S9_L007_R1_001.fastq.gz 4650540759 FASTQ NA 393f7304-aade-4eca-bc5e-dcb06cb2346b 988ceba63796afefb5afb6d8ea608fff NA Primary Tumor C3L-02888-02 +C3L-02888.RNA-Seq.R2.T C3L-02888 PDA RNA-Seq tumor CPT0166540026 200807_UNC32-K00270_0255_AHHY2WBBXY_ATTGTGAA-TGCATTGC_S9_L007_R2_001.fastq.gz 5329470624 FASTQ NA b9b96461-e577-485d-b368-8f0ed1e4131b e6ce1fb6dab37e603a39e4090e1fd87e NA Primary Tumor C3L-02888-02 C3L-02890.MethArray.Green.T C3L-02890 PDA Methylation Array tumor CPT0166650009 203561620008_R06C01_Grn.idat 13676236 IDAT Green 1b3192eb-a5d8-404c-bbab-1e6a4d708b4a 993e68dbce47c4b85844f30725390bc5 NA Primary Tumor C3L-02890-01,C3L-02890-02 C3L-02890.MethArray.Red.T C3L-02890 PDA Methylation Array tumor CPT0166650009 203561620008_R06C01_Red.idat 13676236 IDAT Red 718996ff-e713-40d7-8bdb-38c9e40a5f34 ca49d1c0b35804c29f65a2015d9e2f4b NA Primary Tumor C3L-02890-01,C3L-02890-02 C3L-02890.miRNA-Seq.T C3L-02890 PDA miRNA-Seq tumor CPT0166650012 190712_UNC32-K00270_0192_BH7HL3BBXY_CGATGT_S25_L005_R1_001.unaln.bam 241719651 BAM NA 07e60f8e-2863-4c0d-b060-366547e9b06a 57d387208282753513576517ded1e8a6 NA Primary Tumor C3L-02890-01,C3L-02890-02 @@ -11077,6 +11081,8 @@ C3L-02955.WXS.N C3L-02955 GBM WXS blood_normal CPT0197750002 CPT0197750002.Whole C3L-02955.WXS.N.hg38 C3L-02955 GBM WXS blood_normal CPT0197750002 abef83c1-3c22-4357-9f48-a52ead2d1c6a_wxs_gdc_realn.bam 61179455806 BAM NA 535274f1-2bca-41a0-923b-ec0e1b8c5440 0e17c86ee2da66d5ff616948e525f15e hg38 Blood Derived Normal C3L-02955-31 C3L-02955.WXS.T C3L-02955 GBM WXS tumor CPT0196850009 CPT0196850009.WholeExome.RP-1303.bam 23009684162 BAM NA 478ed93d-e81d-4ee1-af82-d3fa85ce933a 2f2ce4427f8b135b8de6d6efdbdd02a1 hg19 Primary Tumor C3L-02955-01 C3L-02955.WXS.T.hg38 C3L-02955 GBM WXS tumor CPT0196850009 7258c996-c299-4b53-93bf-85df20425431_wxs_gdc_realn.bam 31696351927 BAM NA 278a2b87-c006-4b75-bca9-5cf3954c8412 023501b519ed3cfa26924882cb7b9141 hg38 Primary Tumor C3L-02955-01 +C3L-02956.RNA-Seq.R1.T C3L-02956 PDA RNA-Seq tumor CPT0161630024 200807_UNC32-K00270_0255_AHHY2WBBXY_TTCCTGTT-AGTATCTT_S15_L008_R1_001.fastq.gz 3329611166 FASTQ NA 0a392860-e58e-418e-b55f-a3bf63e70609 5426bfc2763d7522dd934490dfd82823 NA Primary Tumor C3L-02956-01 +C3L-02956.RNA-Seq.R2.T C3L-02956 PDA RNA-Seq tumor CPT0161630024 200807_UNC32-K00270_0255_AHHY2WBBXY_TTCCTGTT-AGTATCTT_S15_L008_R2_001.fastq.gz 3833389566 FASTQ NA 93b3cf8a-9ac7-4c5c-9283-76376d0a9259 2d4b46e2127e177681c5029e17dd3f3a NA Primary Tumor C3L-02956-01 C3L-02957.MethArray.Green.A C3L-02957 LUAD Methylation Array tissue_normal CPT0196900006 203219640133_R05C01_Grn.idat 13676226 IDAT Green 76f06ee5-750f-4105-855e-2dd5ccfe593f 9e920eb73f34265257d851fb99ad4b08 NA Solid Tissue Normal C3L-02957-06 C3L-02957.MethArray.Green.T C3L-02957 LUAD Methylation Array tumor CPT0196880006 203220070154_R04C01_Grn.idat 13676206 IDAT Green 85725044-8fa9-401b-9e87-e925d0cea228 d7f7c9def2449e907e2381107b1d26c1 NA Primary Tumor C3L-02957-02 C3L-02957.MethArray.Red.A C3L-02957 LUAD Methylation Array tissue_normal CPT0196900006 203219640133_R05C01_Red.idat 13676226 IDAT Red 5ee49171-905e-4550-bac5-6ac3d2643fbb 06d7f19fff8f6a8c5a1746d1eb4fc435 NA Solid Tissue Normal C3L-02957-06 @@ -11465,9 +11471,9 @@ C3L-03260.WXS.N C3L-03260 GBM WXS blood_normal CPT0190200002 CPT0190200002.Whole C3L-03260.WXS.N.hg38 C3L-03260 GBM WXS blood_normal CPT0190200002 6a194913-6f77-46e2-8eb6-19fe1ff78405_wxs_gdc_realn.bam 39337293664 BAM NA f43b671d-b7d0-4afb-9492-3f25b9d5995c 20ebd5565774edb49c9d1c617cbe6fa8 hg38 Blood Derived Normal C3L-03260-31 C3L-03260.WXS.T C3L-03260 GBM WXS tumor CPT0189250006 CPT0189250006.WholeExome.RP-1303.bam 30927408831 BAM NA eb0180f7-3827-4044-b73a-7572616e1dac 0d0a196cc9b84e2c44f5f228222bd3b0 hg19 Primary Tumor C3L-03260-01 C3L-03260.WXS.T.hg38 C3L-03260 GBM WXS tumor CPT0189250006 a3156b22-4743-4eb4-9d13-0d5be60ef996_wxs_gdc_realn.bam 42928914301 BAM NA 6e2e9aa3-fb05-4645-b146-22f8a77a147f a6aae5ad4d98fca640cb11e35990d036 hg38 Primary Tumor C3L-03260-01 -C3L-03262.MethArray.Green.A C3L-03262 LUAD Methylation Array tissue_normal CPT0189310006 203561450008_R05C01_Grn.idat 13676221 IDAT Green 6ff79bd1-90eb-40ce-92de-79e4ac69a826 8806b516410dc2af8dea752ab23744fe NA Solid Tissue Normal C3L-03262-04,C3L-03262-05 +C3L-03262.MethArray.Green.A.ADNA_o2jknVj C3L-03262 LUAD Methylation Array tissue_normal CPT0189310006 203561450008_R05C01_Grn.idat 13676221 IDAT Green 6ff79bd1-90eb-40ce-92de-79e4ac69a826 8806b516410dc2af8dea752ab23744fe NA Solid Tissue Normal C3L-03262-04,C3L-03262-05 additional_DNA ADNA_o2jknVj Duplicate item: Additional DNA requested C3L-03262.MethArray.Green.T C3L-03262 LUAD Methylation Array tumor CPT0189280007 203219650169_R07C01_Grn.idat 13676231 IDAT Green 4438bcdd-3702-45f5-9e1d-1b7f453143f3 43b990b5c8ce03dd13070a59e4d37b95 NA Primary Tumor C3L-03262-01,C3L-03262-03 -C3L-03262.MethArray.Red.A C3L-03262 LUAD Methylation Array tissue_normal CPT0189310006 203561450008_R05C01_Red.idat 13676221 IDAT Red 5ce5b57a-0bef-4f1c-9e02-12992363cf2d 33325a00fa2138d873118a47c2215499 NA Solid Tissue Normal C3L-03262-04,C3L-03262-05 +C3L-03262.MethArray.Red.A.ADNA_o2jknVj C3L-03262 LUAD Methylation Array tissue_normal CPT0189310006 203561450008_R05C01_Red.idat 13676221 IDAT Red 5ce5b57a-0bef-4f1c-9e02-12992363cf2d 33325a00fa2138d873118a47c2215499 NA Solid Tissue Normal C3L-03262-04,C3L-03262-05 additional_DNA ADNA_o2jknVj Duplicate item: Additional DNA requested C3L-03262.MethArray.Red.T C3L-03262 LUAD Methylation Array tumor CPT0189280007 203219650169_R07C01_Red.idat 13676231 IDAT Red 2fcf4c87-5745-4f15-8400-acc7eaee354e f7fe307e9e4bcb84c0a1a5c24e898de7 NA Primary Tumor C3L-03262-01,C3L-03262-03 C3L-03262.miRNA-Seq.A C3L-03262 LUAD miRNA-Seq tissue_normal CPT0189310009 190130_UNC31-K00269_0188_BH2FGCBBXY_ACTTGA_S9_L006_R1_001.unaln.bam 272725713 BAM NA d10f7516-5a18-434b-8ddd-dd41f973b7e0 6e475905dfe6bab4e3095aedd6a21cb4 NA Solid Tissue Normal C3L-03262-04,C3L-03262-05 C3L-03262.miRNA-Seq.A.hg38 C3L-03262 LUAD miRNA-Seq tissue_normal CPT0189310009 b5930a04-f24c-459e-b695-d1d8ef8b7dc7_mirnaseq_gdc_realn.bam 309077234 BAM NA 65242e56-c359-4191-b4e5-b30a0be47213 9ad11388304c38d37ee2d2aea811c57a hg38 Solid Tissue Normal C3L-03262-04,C3L-03262-05 @@ -11487,8 +11493,8 @@ C3L-03262.WGS.N C3L-03262 LUAD WGS blood_normal CPT0190210002 CPT0190210002.Whol C3L-03262.WGS.N.hg38 C3L-03262 LUAD WGS blood_normal CPT0190210002 a93a956b-f67c-46da-8c83-18e69db799ed_wgs_gdc_realn.bam 82723706130 BAM NA 9359c8e3-33ed-4620-9b71-5c479dd2a9f4 db2f0250a524f7391540d8a50bc928f1 hg38 Blood Derived Normal C3L-03262-31 C3L-03262.WGS.T C3L-03262 LUAD WGS tumor CPT0189280007 CPT0189280007.WholeGenome.RP-1303.bam 54395352915 BAM NA efea4fca-95c3-416a-bce8-f43c22c3bc49 e6f21585b81bc57e582dd32836223dfe hg19 Primary Tumor C3L-03262-01,C3L-03262-03 C3L-03262.WGS.T.hg38 C3L-03262 LUAD WGS tumor CPT0189280007 a40a3846-3a11-4474-8deb-2a4629226afb_wgs_gdc_realn.bam 81199088175 BAM NA 71555590-e695-4782-9f1d-1fea8b8a11f0 e6f72e0a62a8bd5413217a1c62601afd hg38 Primary Tumor C3L-03262-01,C3L-03262-03 -C3L-03262.WXS.A C3L-03262 LUAD WXS tissue_normal CPT0189310006 CPT0189310006.WholeExome.RP-1303.bam 37479624642 BAM NA 2e7c9d48-09d1-4944-96a5-543c7002f847 600f59b63b0b8a75fc483847ec5344a0 hg19 Solid Tissue Normal C3L-03262-04,C3L-03262-05 -C3L-03262.WXS.A.hg38 C3L-03262 LUAD WXS tissue_normal CPT0189310006 8419506b-f9d2-4fb0-bce5-271950429dc6_wxs_gdc_realn.bam 51308609883 BAM NA 382cac2a-d4c5-488d-8bda-c5eb0caba64b 0d641e07746bdc9de0238413b60262d7 hg38 Solid Tissue Normal C3L-03262-04,C3L-03262-05 +C3L-03262.WXS.A.ADNA_o2jknVj C3L-03262 LUAD WXS tissue_normal CPT0189310006 CPT0189310006.WholeExome.RP-1303.bam 37479624642 BAM NA 2e7c9d48-09d1-4944-96a5-543c7002f847 600f59b63b0b8a75fc483847ec5344a0 hg19 Solid Tissue Normal C3L-03262-04,C3L-03262-05 additional_DNA ADNA_o2jknVj Duplicate item: Additional DNA requested +C3L-03262.WXS.A.ADNA_o2jknVj.hg38 C3L-03262 LUAD WXS tissue_normal CPT0189310006 8419506b-f9d2-4fb0-bce5-271950429dc6_wxs_gdc_realn.bam 51308609883 BAM NA 382cac2a-d4c5-488d-8bda-c5eb0caba64b 0d641e07746bdc9de0238413b60262d7 hg38 Solid Tissue Normal C3L-03262-04,C3L-03262-05 additional_DNA ADNA_o2jknVj Duplicate item: Additional DNA requested C3L-03262.WXS.N C3L-03262 LUAD WXS blood_normal CPT0190210002 CPT0190210002.WholeExome.RP-1303.bam 21861734499 BAM NA 81e8863a-716f-4fce-bbac-14c629de6e6b b92f49ab404a22c24b41115c3cc36bd5 hg19 Blood Derived Normal C3L-03262-31 C3L-03262.WXS.N.hg38 C3L-03262 LUAD WXS blood_normal CPT0190210002 a93a956b-f67c-46da-8c83-18e69db799ed_wxs_gdc_realn.bam 30007536859 BAM NA 376a3956-658f-44ec-ba00-fc88fed38ee1 db20f29690ae856747b16f71d303cab0 hg38 Blood Derived Normal C3L-03262-31 C3L-03262.WXS.T C3L-03262 LUAD WXS tumor CPT0189280007 CPT0189280007.WholeExome.RP-1303.bam 23493868991 BAM NA 70ceb6ad-8420-451e-ac87-5d1925ee7c8e 506d595913efebff0b7e666c1e9e5d25 hg19 Primary Tumor C3L-03262-01,C3L-03262-03 @@ -11628,6 +11634,8 @@ C3L-03308.WXS.Nbc C3L-03308 AML WXS buccal_normal CPT0201630002 CPT0201630002.Wh C3L-03308.WXS.Nbc.hg38 C3L-03308 AML WXS buccal_normal CPT0201630002 d3e20335-9964-459f-b475-7572352452cc_wxs_gdc_realn.bam 33863986000 BAM NA 9ea0ec47-41c9-4b2e-badb-ccfd4979751a 54d599e0a52fac7f3ba86f66a57866be hg38 Buccal Cell Normal C3L-03308-50,C3L-03308-51,C3L-03308-52 C3L-03308.WXS.Tbm C3L-03308 AML WXS tumor_bone_marrow CPT0201550002 CPT0201550002.WholeExome.RP-1303.bam 23177226677 BAM NA 89398d58-6aff-4b44-aee1-b4a1be711054 8a7eae1f421b9e4cc549887e7d14af57 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-03308-54 C3L-03308.WXS.Tbm.hg38 C3L-03308 AML WXS tumor_bone_marrow CPT0201550002 1489dd25-8419-4035-b058-cbd0c1d93caf_wxs_gdc_realn.bam 32380906747 BAM NA 0d6b19e7-cafc-43e4-9401-37a8da579764 6f15826e0d25dcf5b08ceabcd7b20ae3 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-03308-54 +C3L-03348.RNA-Seq.R1.T C3L-03348 PDA RNA-Seq tumor CPT0167050031 200807_UNC32-K00270_0255_AHHY2WBBXY_ACTCGTGT-ATTGGAAC_S8_L007_R1_001.fastq.gz 4346927555 FASTQ NA cb4f0584-8ef0-4ed0-b10c-9b7e00aab287 27b9d71bb74d9cc28ef112766a28bf50 NA Primary Tumor C3L-03348-03 +C3L-03348.RNA-Seq.R2.T C3L-03348 PDA RNA-Seq tumor CPT0167050031 200807_UNC32-K00270_0255_AHHY2WBBXY_ACTCGTGT-ATTGGAAC_S8_L007_R2_001.fastq.gz 4807680903 FASTQ NA 39cef4d2-3d3c-4e64-b7c0-2ee3c22a2606 9defce0f036eacb880d54011a6c6f899 NA Primary Tumor C3L-03348-03 C3L-03350.MethArray.Green.T C3L-03350 PDA Methylation Array tumor CPT0198310008 203561450030_R06C01_Grn.idat 13676216 IDAT Green a85a8a13-e047-4e86-94c8-3f070d40971b beac862c52e72f57a01d02dc3b9004ff NA Primary Tumor C3L-03350-01,C3L-03350-03 C3L-03350.MethArray.Red.T C3L-03350 PDA Methylation Array tumor CPT0198310008 203561450030_R06C01_Red.idat 13676216 IDAT Red 94a4729b-2548-408c-acfd-e21b6676634f 092da6eaa4d523f244241b553a76d214 NA Primary Tumor C3L-03350-01,C3L-03350-03 C3L-03350.miRNA-Seq.T C3L-03350 PDA miRNA-Seq tumor CPT0198310011 190712_UNC32-K00270_0192_BH7HL3BBXY_CCGTCC_S39_L005_R1_001.unaln.bam 244660424 BAM NA d9497292-ce88-4a2c-ba01-cb532316352c e8c04c64348f5721b579ce52a468d901 NA Primary Tumor C3L-03350-01,C3L-03350-03 @@ -12123,24 +12131,26 @@ C3L-03589.WXS.N C3L-03589 UCEC WXS blood_normal CPT0188770002 CPT0188770002.Whol C3L-03589.WXS.N.hg38 C3L-03589 UCEC WXS blood_normal CPT0188770002 68f8e0fd-5220-4628-9987-e4fbea57e9e9_wxs_gdc_realn.bam 32013242171 BAM NA 39e343ca-ccae-406e-b79e-46c1b13d585c c21650abd03dd37690be33dda1050ac8 hg38 Blood Derived Normal C3L-03589-71 C3L-03589.WXS.T C3L-03589 UCEC WXS tumor CPT0188710006 CPT0188710006.WholeExome.RP-1303.bam 27977586785 BAM NA abdfdd89-5f4e-4ef0-8874-c6f2235de180 98cc2eb4542757d259770bfdf0d1e125 hg19 Primary Tumor C3L-03589-03 C3L-03589.WXS.T.hg38 C3L-03589 UCEC WXS tumor CPT0188710006 7683eac6-c2fe-47d2-969f-5d90ef340b6a_wxs_gdc_realn.bam 39643076597 BAM NA c38f1f62-a3fb-4a49-a51b-8ff31ececee1 dab1be6c12660ccb4b3e9c8c18304bbb hg38 Primary Tumor C3L-03589-03 -C3L-03624.MethArray.Green.T C3L-03624 PDA Methylation Array tumor CPT0198600029 203561450054_R06C01_Grn.idat 13676216 IDAT Green d3d57b07-2190-4139-8b13-5d0b898fc315 5ca344f85edf0bb111aa8bb930127282 NA Primary Tumor C3L-03624-02 -C3L-03624.MethArray.Green.T.core C3L-03624 PDA Methylation Array tumor CPT0198600023 203561450106_R06C01_Grn.idat 13676216 IDAT Green 99917422-bc29-474e-ac63-c55f951c5f29 5d43b6e4dedee263cb4287afa4e7163e NA Primary Tumor C3L-03624-02 .core -C3L-03624.MethArray.Red.T C3L-03624 PDA Methylation Array tumor CPT0198600029 203561450054_R06C01_Red.idat 13676216 IDAT Red 1005c423-1b8a-4f80-8aff-73d534839915 1303ff3080de643fe0991f280151552a NA Primary Tumor C3L-03624-02 -C3L-03624.MethArray.Red.T.core C3L-03624 PDA Methylation Array tumor CPT0198600023 203561450106_R06C01_Red.idat 13676216 IDAT Red 02c528e9-bcee-40cc-870c-4ce4860499f5 e384cf67f868ef89534a060eca8b45fb NA Primary Tumor C3L-03624-02 .core -C3L-03624.Targeted.T C3L-03624 PDA Targeted Sequencing tumor CPT0198600029 CPT0198600029.CustomSelection.RP-1303.PDO-18786.bam 4326516796 BAM NA 39370a66-c702-4d2b-98a7-2a0037ab0f7c 931996938d6421c1494dc0451d57faa2 hg19 Primary Tumor C3L-03624-02 -C3L-03624.Targeted.T.core C3L-03624 PDA Targeted Sequencing tumor CPT0198600023 CPT0198600023.CustomSelection.RP-1303.PDO-18786.bam 4687124645 BAM NA 331dafe8-ebde-414e-aea9-606df4d52972 25d346e5784a4a1aa7d3ffe5f33cf552 hg19 Primary Tumor C3L-03624-02 .core +C3L-03622.RNA-Seq.R1.T C3L-03622 PDA RNA-Seq tumor CPT0198520026 200807_UNC32-K00270_0255_AHHY2WBBXY_CCTTCACC-GACGCTCC_S13_L008_R1_001.fastq.gz 3685200138 FASTQ NA 7edc8bc7-80fc-466d-bae6-ea92952dc276 12bf08494f7a147f1af2757ee04e6365 NA Primary Tumor C3L-03622-02 +C3L-03622.RNA-Seq.R2.T C3L-03622 PDA RNA-Seq tumor CPT0198520026 200807_UNC32-K00270_0255_AHHY2WBBXY_CCTTCACC-GACGCTCC_S13_L008_R2_001.fastq.gz 4305534457 FASTQ NA 71eca917-c9e4-4e30-b6c6-87ab271d4005 0fac15fd527557478eedf1ee97aec220 NA Primary Tumor C3L-03622-02 +C3L-03624.MethArray.Green.T.BULK_VONgrMO C3L-03624 PDA Methylation Array tumor CPT0198600029 203561450054_R06C01_Grn.idat 13676216 IDAT Green d3d57b07-2190-4139-8b13-5d0b898fc315 5ca344f85edf0bb111aa8bb930127282 NA Primary Tumor C3L-03624-02 bulk_DNA BULK_VONgrMO Duplicate item: PDA Pilot - bulk-derived DNA +C3L-03624.MethArray.Green.T.CORE_M89OglR.core C3L-03624 PDA Methylation Array tumor CPT0198600023 203561450106_R06C01_Grn.idat 13676216 IDAT Green 99917422-bc29-474e-ac63-c55f951c5f29 5d43b6e4dedee263cb4287afa4e7163e NA Primary Tumor C3L-03624-02 .core core_DNA CORE_M89OglR Duplicate item: PDA Pilot - core-derived DNA +C3L-03624.MethArray.Red.T.BULK_VONgrMO C3L-03624 PDA Methylation Array tumor CPT0198600029 203561450054_R06C01_Red.idat 13676216 IDAT Red 1005c423-1b8a-4f80-8aff-73d534839915 1303ff3080de643fe0991f280151552a NA Primary Tumor C3L-03624-02 bulk_DNA BULK_VONgrMO Duplicate item: PDA Pilot - bulk-derived DNA +C3L-03624.MethArray.Red.T.CORE_M89OglR.core C3L-03624 PDA Methylation Array tumor CPT0198600023 203561450106_R06C01_Red.idat 13676216 IDAT Red 02c528e9-bcee-40cc-870c-4ce4860499f5 e384cf67f868ef89534a060eca8b45fb NA Primary Tumor C3L-03624-02 .core core_DNA CORE_M89OglR Duplicate item: PDA Pilot - core-derived DNA +C3L-03624.Targeted.T.BULK_VONgrMO C3L-03624 PDA Targeted Sequencing tumor CPT0198600029 CPT0198600029.CustomSelection.RP-1303.PDO-18786.bam 4326516796 BAM NA 39370a66-c702-4d2b-98a7-2a0037ab0f7c 931996938d6421c1494dc0451d57faa2 hg19 Primary Tumor C3L-03624-02 bulk_DNA BULK_VONgrMO Duplicate item: PDA Pilot - bulk-derived DNA +C3L-03624.Targeted.T.CORE_M89OglR.core C3L-03624 PDA Targeted Sequencing tumor CPT0198600023 CPT0198600023.CustomSelection.RP-1303.PDO-18786.bam 4687124645 BAM NA 331dafe8-ebde-414e-aea9-606df4d52972 25d346e5784a4a1aa7d3ffe5f33cf552 hg19 Primary Tumor C3L-03624-02 .core core_DNA CORE_M89OglR Duplicate item: PDA Pilot - core-derived DNA C3L-03624.WGS.N C3L-03624 PDA WGS blood_normal CPT0198630002 CPT0198630002.WholeGenome.RP-1303.bam 65953852449 BAM NA 7d95d29f-beb3-4647-98a7-b20861630aa9 d603c45cacb38948894e40036ca69417 hg19 Blood Derived Normal C3L-03624-31 C3L-03624.WGS.N.hg38 C3L-03624 PDA WGS blood_normal CPT0198630002 c96c0aee-5f31-409e-9188-8fcf3653cdc0_wgs_gdc_realn.bam 93560637257 BAM NA 6a5aad2a-8a56-4295-a636-a70eca9cefae a0949d97589fc9c5ad8fc31a23478510 hg38 Blood Derived Normal C3L-03624-31 -C3L-03624.WGS.T C3L-03624 PDA WGS tumor CPT0198600029 CPT0198600029.WholeGenome.RP-1303.bam 66620372675 BAM NA 89d44f2b-e26f-4147-ab32-443181a9188c 253c8492ee5d8fde2ea8ed1c44cc0197 hg19 Primary Tumor C3L-03624-02 -C3L-03624.WGS.T.core C3L-03624 PDA WGS tumor CPT0198600023 CPT0198600023.WholeGenome.RP-1303.bam 67120752450 BAM NA fef74278-e5cb-4a58-8cef-f32095a53697 6be236b760b61393e9fa996523eb1407 hg19 Primary Tumor C3L-03624-02 .core -C3L-03624.WGS.T.hg38 C3L-03624 PDA WGS tumor CPT0198600029 a4653823-73c2-46db-b7f2-6dca71812990_wgs_gdc_realn.bam 96494702130 BAM NA f8ec4827-e5a0-4521-821d-6a0833c31ae2 d9af7f3ac98f1c19f2f059508c8e7dc1 hg38 Primary Tumor C3L-03624-02 -C3L-03624.WGS.T.hg38.core C3L-03624 PDA WGS tumor CPT0198600023 85ace2b1-5081-4afa-ac26-f14706330702_wgs_gdc_realn.bam 99277653748 BAM NA 08ad649a-c5a7-40bd-b557-8ce768c71258 cef4326e80ee70f78d83b95514ded7c8 hg38 Primary Tumor C3L-03624-02 .core +C3L-03624.WGS.T.BULK_VONgrMO C3L-03624 PDA WGS tumor CPT0198600029 CPT0198600029.WholeGenome.RP-1303.bam 66620372675 BAM NA 89d44f2b-e26f-4147-ab32-443181a9188c 253c8492ee5d8fde2ea8ed1c44cc0197 hg19 Primary Tumor C3L-03624-02 bulk_DNA BULK_VONgrMO Duplicate item: PDA Pilot - bulk-derived DNA +C3L-03624.WGS.T.BULK_VONgrMO.hg38 C3L-03624 PDA WGS tumor CPT0198600029 a4653823-73c2-46db-b7f2-6dca71812990_wgs_gdc_realn.bam 96494702130 BAM NA f8ec4827-e5a0-4521-821d-6a0833c31ae2 d9af7f3ac98f1c19f2f059508c8e7dc1 hg38 Primary Tumor C3L-03624-02 bulk_DNA BULK_VONgrMO Duplicate item: PDA Pilot - bulk-derived DNA +C3L-03624.WGS.T.CORE_M89OglR.core C3L-03624 PDA WGS tumor CPT0198600023 CPT0198600023.WholeGenome.RP-1303.bam 67120752450 BAM NA fef74278-e5cb-4a58-8cef-f32095a53697 6be236b760b61393e9fa996523eb1407 hg19 Primary Tumor C3L-03624-02 .core core_DNA CORE_M89OglR Duplicate item: PDA Pilot - core-derived DNA +C3L-03624.WGS.T.CORE_M89OglR.hg38.core C3L-03624 PDA WGS tumor CPT0198600023 85ace2b1-5081-4afa-ac26-f14706330702_wgs_gdc_realn.bam 99277653748 BAM NA 08ad649a-c5a7-40bd-b557-8ce768c71258 cef4326e80ee70f78d83b95514ded7c8 hg38 Primary Tumor C3L-03624-02 .core core_DNA CORE_M89OglR Duplicate item: PDA Pilot - core-derived DNA C3L-03624.WXS.N C3L-03624 PDA WXS blood_normal CPT0198630002 CPT0198630002.WholeExome.RP-1303.bam 25023948333 BAM NA 37dbda67-6616-42e2-a417-9ab8175856c7 abc799b4563ce92a4c0222986342df81 hg19 Blood Derived Normal C3L-03624-31 C3L-03624.WXS.N.hg38 C3L-03624 PDA WXS blood_normal CPT0198630002 c96c0aee-5f31-409e-9188-8fcf3653cdc0_wxs_gdc_realn.bam 33898148249 BAM NA dbbaffe7-de40-4707-ac67-682934f2c5ca 8607275b484c3152010691c6d88dd5bd hg38 Blood Derived Normal C3L-03624-31 -C3L-03624.WXS.T.core.high_cov C3L-03624 PDA WXS tumor CPT0198600023 CPT0198600023.WholeExome.RP-1303.bam 41660712690 BAM NA f9c7e8bb-2cdd-4adc-9d21-de3b24c850aa 79a0844548612a770e688e8612aa2e17 hg19 Primary Tumor C3L-03624-02 .core.high_cov -C3L-03624.WXS.T.hg38.core.high_cov C3L-03624 PDA WXS tumor CPT0198600023 85ace2b1-5081-4afa-ac26-f14706330702_wxs_gdc_realn.bam 58465454619 BAM NA 45881215-b482-43ca-b3b8-260ecd7c413e 00d7ebbc7647e175d0e3cc371973da64 hg38 Primary Tumor C3L-03624-02 .core.high_cov -C3L-03624.WXS.T.hg38.high_cov C3L-03624 PDA WXS tumor CPT0198600029 a4653823-73c2-46db-b7f2-6dca71812990_wxs_gdc_realn.bam 60382152695 BAM NA 791d21fe-cffe-47fe-afef-ab032648cd52 2eaf095ef634b2ad9aa42b20e9271261 hg38 Primary Tumor C3L-03624-02 .high_cov -C3L-03624.WXS.T.high_cov C3L-03624 PDA WXS tumor CPT0198600029 CPT0198600029.WholeExome.RP-1303.bam 42976995465 BAM NA 40f9adc9-29c0-485c-b99e-866f7e1cf4c6 18bb27b3df391e6e6556ad5de50f2dec hg19 Primary Tumor C3L-03624-02 .high_cov +C3L-03624.WXS.T.BULK_VONgrMO.hg38.high_cov C3L-03624 PDA WXS tumor CPT0198600029 a4653823-73c2-46db-b7f2-6dca71812990_wxs_gdc_realn.bam 60382152695 BAM NA 791d21fe-cffe-47fe-afef-ab032648cd52 2eaf095ef634b2ad9aa42b20e9271261 hg38 Primary Tumor C3L-03624-02 .high_cov bulk_DNA BULK_VONgrMO Duplicate item: PDA Pilot - bulk-derived DNA +C3L-03624.WXS.T.BULK_VONgrMO.high_cov C3L-03624 PDA WXS tumor CPT0198600029 CPT0198600029.WholeExome.RP-1303.bam 42976995465 BAM NA 40f9adc9-29c0-485c-b99e-866f7e1cf4c6 18bb27b3df391e6e6556ad5de50f2dec hg19 Primary Tumor C3L-03624-02 .high_cov bulk_DNA BULK_VONgrMO Duplicate item: PDA Pilot - bulk-derived DNA +C3L-03624.WXS.T.CORE_M89OglR.core.high_cov C3L-03624 PDA WXS tumor CPT0198600023 CPT0198600023.WholeExome.RP-1303.bam 41660712690 BAM NA f9c7e8bb-2cdd-4adc-9d21-de3b24c850aa 79a0844548612a770e688e8612aa2e17 hg19 Primary Tumor C3L-03624-02 .core.high_cov core_DNA CORE_M89OglR Duplicate item: PDA Pilot - core-derived DNA +C3L-03624.WXS.T.CORE_M89OglR.hg38.core.high_cov C3L-03624 PDA WXS tumor CPT0198600023 85ace2b1-5081-4afa-ac26-f14706330702_wxs_gdc_realn.bam 58465454619 BAM NA 45881215-b482-43ca-b3b8-260ecd7c413e 00d7ebbc7647e175d0e3cc371973da64 hg38 Primary Tumor C3L-03624-02 .core.high_cov core_DNA CORE_M89OglR Duplicate item: PDA Pilot - core-derived DNA C3L-03628.MethArray.Green.T C3L-03628 PDA Methylation Array tumor CPT0198700008 203561450100_R06C01_Grn.idat 13676221 IDAT Green 1050e3e8-af97-4065-9865-1c7d9194918e 1ea94a02fc977c54a44cc7e783177ab8 NA Primary Tumor C3L-03628-01,C3L-03628-02 C3L-03628.MethArray.Red.T C3L-03628 PDA Methylation Array tumor CPT0198700008 203561450100_R06C01_Red.idat 13676221 IDAT Red 30c5bb4e-e134-4c59-b92d-bb48f7d89e5e 4846ec8d806685e5a7688ea5534761d6 NA Primary Tumor C3L-03628-01,C3L-03628-02 C3L-03628.miRNA-Seq.T C3L-03628 PDA miRNA-Seq tumor CPT0198700011 190712_UNC32-K00270_0192_BH7HL3BBXY_TTAGGC_S26_L005_R1_001.unaln.bam 216539200 BAM NA 52dde65c-4875-4d54-b53f-eed554f095ae 4aa7533ea1de95d81d1867d046d29b97 NA Primary Tumor C3L-03628-01,C3L-03628-02 @@ -12159,6 +12169,8 @@ C3L-03628.WXS.N C3L-03628 PDA WXS blood_normal CPT0198740002 CPT0198740002.Whole C3L-03628.WXS.N.hg38 C3L-03628 PDA WXS blood_normal CPT0198740002 eb7b05e5-5bdf-4428-86dc-c3db5026f54d_wxs_gdc_realn.bam 39365199085 BAM NA dd82c39e-22e0-46eb-a844-2fe349b189ca 28322c6619a38f31234cf3ad63f599ef hg38 Blood Derived Normal C3L-03628-31 C3L-03628.WXS.T.hg38.high_cov C3L-03628 PDA WXS tumor CPT0198700008 cb70b1fc-f720-49a2-bc24-0f14fe2a09d1_wxs_gdc_realn.bam 72532663191 BAM NA d40063dc-8e93-4938-8ebc-29e56169bb36 1e7d22e2b97179eff14dd4aeb25facb8 hg38 Primary Tumor C3L-03628-01,C3L-03628-02 .high_cov C3L-03628.WXS.T.high_cov C3L-03628 PDA WXS tumor CPT0198700008 CPT0198700008.WholeExome.RP-1303.bam 52288761525 BAM NA 6e2d92da-2d9c-4634-b2da-e04534bd2fcc 2ae31f884c27ecd80f58132fda566f32 hg19 Primary Tumor C3L-03628-01,C3L-03628-02 .high_cov +C3L-03629.RNA-Seq.R1.T C3L-03629 PDA RNA-Seq tumor CPT0198810030 200807_UNC32-K00270_0255_AHHY2WBBXY_GACGTCTT-GGTTCACC_S6_L006_R1_001.fastq.gz 3422136785 FASTQ NA 7fecdbc1-0f98-4335-bf75-3036a9d9ab9e 22354d5ee834f218f1f2d5a1560218c7 NA Primary Tumor C3L-03629-02 +C3L-03629.RNA-Seq.R2.T C3L-03629 PDA RNA-Seq tumor CPT0198810030 200807_UNC32-K00270_0255_AHHY2WBBXY_GACGTCTT-GGTTCACC_S6_L006_R2_001.fastq.gz 3771090019 FASTQ NA 74d67b6a-cbb9-458f-b5b6-c498e4e559fc 86a2a6f11f211ae31e3fc7921761788a NA Primary Tumor C3L-03629-02 C3L-03630.MethArray.Green.T C3L-03630 PDA Methylation Array tumor CPT0198910008 203561450008_R06C01_Grn.idat 13676221 IDAT Green d268937b-f28f-4bfe-bab5-dc3fe674d81a f4a71092e2cb3bff1a8d6e7231aaa53f NA Primary Tumor C3L-03630-02,C3L-03630-03 C3L-03630.MethArray.Red.T C3L-03630 PDA Methylation Array tumor CPT0198910008 203561450008_R06C01_Red.idat 13676221 IDAT Red 53dd3494-bb5c-45a2-b6d4-c5cf5938393c f639c9e7e929c680f34b569ddbdd43b1 NA Primary Tumor C3L-03630-02,C3L-03630-03 C3L-03630.miRNA-Seq.T C3L-03630 PDA miRNA-Seq tumor CPT0198910011 190712_UNC32-K00270_0192_BH7HL3BBXY_ACAGTG_S28_L005_R1_001.unaln.bam 201073157 BAM NA 87eb915e-ce48-4726-b06f-df2635e2cd8c fa5d0ebba13efac7701b81ccbf3bcfb6 NA Primary Tumor C3L-03630-02,C3L-03630-03 @@ -12542,46 +12554,46 @@ C3L-03748.WXS.N.hg38 C3L-03748 GBM WXS blood_normal CPT0218000002 cedd1569-11a3- C3L-03748.WXS.T C3L-03748 GBM WXS tumor CPT0217060006 CPT0217060006.WholeExome.RP-1303.bam 21251285282 BAM NA b61146b2-df6a-446f-90c6-88c5bcf452a2 22bfaf5504beb70d6d1b8444f27104dc hg19 Primary Tumor C3L-03748-04 C3L-03748.WXS.T.hg38 C3L-03748 GBM WXS tumor CPT0217060006 9bc0478a-68bb-4e5d-a4a8-7b3383218e8c_wxs_gdc_realn.bam 28933196213 BAM NA e3fb355d-984d-41bf-a279-5464c72171e7 168571be72739a1986a7e8cf746babd5 hg38 Primary Tumor C3L-03748-04 C3L-03961.MethArray.Green.A C3L-03961 LSCC Methylation Array tissue_normal CPT0232690006 203219640172_R06C01_Grn.idat 13676221 IDAT Green b3f8f61a-5ab9-4b90-8473-e11d9709de25 345753241e75cd0b2cd932c2924eb28d NA Solid Tissue Normal C3L-03961-07 -C3L-03961.MethArray.Green.T C3L-03961 LSCC Methylation Array tumor CPT0232640006 203561620008_R05C01_Grn.idat 13676236 IDAT Green 3e7670e5-a1b6-4311-b9f9-66c0888e11e6 81b7f14f5f8037cf8b60a009a109fca4 NA Primary Tumor C3L-03961-02 C3L-03961.MethArray.Green.T.deprecated C3L-03961 LSCC Methylation Array tumor CPT0232670006 203219650157_R08C01_Grn.idat 13676227 IDAT Green e38dc99d-8c61-4740-b897-a4dda1e6064b 7199e0bcbcc2613344735064f9f60fd1 NA Primary Tumor C3L-03961-05 .deprecated +C3L-03961.MethArray.Green.T.RDNA_o2KQ273 C3L-03961 LSCC Methylation Array tumor CPT0232640006 203561620008_R05C01_Grn.idat 13676236 IDAT Green 3e7670e5-a1b6-4311-b9f9-66c0888e11e6 81b7f14f5f8037cf8b60a009a109fca4 NA Primary Tumor C3L-03961-02 replacement_DNA RDNA_o2KQ273 Duplicate item: Replacement DNA Distribution - original aliquot failed C3L-03961.MethArray.Red.A C3L-03961 LSCC Methylation Array tissue_normal CPT0232690006 203219640172_R06C01_Red.idat 13676221 IDAT Red 52fb1682-bc97-48a4-ad27-9bc1d3e9327e a840de770322a733189aff4def84df80 NA Solid Tissue Normal C3L-03961-07 -C3L-03961.MethArray.Red.T C3L-03961 LSCC Methylation Array tumor CPT0232640006 203561620008_R05C01_Red.idat 13676236 IDAT Red f57df523-6bda-435b-9771-0e640833c40b a8697fa7694bb0c41aa7586142eacd0f NA Primary Tumor C3L-03961-02 C3L-03961.MethArray.Red.T.deprecated C3L-03961 LSCC Methylation Array tumor CPT0232670006 203219650157_R08C01_Red.idat 13676227 IDAT Red 0c03a3de-ba15-4907-8500-fdb97b469889 3b09e45bc4f2ad622c0c50490b7332a8 NA Primary Tumor C3L-03961-05 .deprecated +C3L-03961.MethArray.Red.T.RDNA_o2KQ273 C3L-03961 LSCC Methylation Array tumor CPT0232640006 203561620008_R05C01_Red.idat 13676236 IDAT Red f57df523-6bda-435b-9771-0e640833c40b a8697fa7694bb0c41aa7586142eacd0f NA Primary Tumor C3L-03961-02 replacement_DNA RDNA_o2KQ273 Duplicate item: Replacement DNA Distribution - original aliquot failed C3L-03961.miRNA-Seq.A C3L-03961 LSCC miRNA-Seq tissue_normal CPT0232690009 190206_UNC31-K00269_0191_AH2WY5BBXY_CATGGC_S17_L005_R1_001.unaln.bam 171764705 BAM NA bed8c680-6faa-4715-9ca2-b257d31ba992 c9b4a436929a52677c8fb9e44b339452 NA Solid Tissue Normal C3L-03961-07 C3L-03961.miRNA-Seq.A.hg38 C3L-03961 LSCC miRNA-Seq tissue_normal CPT0232690009 108e3a58-34a4-4061-a7eb-8748d095adcc_mirnaseq_gdc_realn.bam 195088072 BAM NA 6d6a2cff-ea1f-4c71-9f81-ccdb2dc9990b 4111778d9bf872c6bc0e4542e3a0eeee hg38 Solid Tissue Normal C3L-03961-07 -C3L-03961.miRNA-Seq.T C3L-03961 LSCC miRNA-Seq tumor CPT0232640009 190508_UNC31-K00269_0215_BH7FYKBBXY_TATAAT_S44_L002_R1_001.unaln.bam 226095721 BAM NA 740d37e8-f7a4-47ee-91ac-9981cc53682b 46161bbb7cd966c458cfaed2ec2cddae NA Primary Tumor C3L-03961-02 C3L-03961.miRNA-Seq.T.deprecated C3L-03961 LSCC miRNA-Seq tumor CPT0232670009 190206_UNC31-K00269_0191_AH2WY5BBXY_AGTCAA_S36_L004_R1_001.unaln.bam 185363128 BAM NA 0e14525a-b29b-49c7-9f67-f499e25f487a 4ca0007bc0ab08adca8de12f3a3f3928 NA Primary Tumor C3L-03961-05 .deprecated -C3L-03961.miRNA-Seq.T.hg38 C3L-03961 LSCC miRNA-Seq tumor CPT0232640009 85d5ed0a-712a-4eb8-be3b-2eb91d8c577e_mirnaseq_gdc_realn.bam 257204134 BAM NA 86f70ae8-27b8-4c45-a417-338741ebf733 7a1965c3dbc82fc0bb494d6d65b61fb0 hg38 Primary Tumor C3L-03961-02 C3L-03961.miRNA-Seq.T.hg38.deprecated C3L-03961 LSCC miRNA-Seq tumor CPT0232670009 5645a19b-cae5-4734-870b-bede7805921e_mirnaseq_gdc_realn.bam 208010996 BAM NA 30e6a55d-70c9-4538-9777-9aa14f98e7b3 b8e9ef81bf3d67bc9857d3491cd13576 hg38 Primary Tumor C3L-03961-05 .deprecated +C3L-03961.miRNA-Seq.T.RRNA_rk5RkXK C3L-03961 LSCC miRNA-Seq tumor CPT0232640009 190508_UNC31-K00269_0215_BH7FYKBBXY_TATAAT_S44_L002_R1_001.unaln.bam 226095721 BAM NA 740d37e8-f7a4-47ee-91ac-9981cc53682b 46161bbb7cd966c458cfaed2ec2cddae NA Primary Tumor C3L-03961-02 replacement_RNA RRNA_rk5RkXK Duplicate item: Replacement RNA Distribution - original aliquot failed +C3L-03961.miRNA-Seq.T.RRNA_rk5RkXK.hg38 C3L-03961 LSCC miRNA-Seq tumor CPT0232640009 85d5ed0a-712a-4eb8-be3b-2eb91d8c577e_mirnaseq_gdc_realn.bam 257204134 BAM NA 86f70ae8-27b8-4c45-a417-338741ebf733 7a1965c3dbc82fc0bb494d6d65b61fb0 hg38 Primary Tumor C3L-03961-02 replacement_RNA RRNA_rk5RkXK Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-03961.RNA-Seq.chimeric.A.hg38 C3L-03961 LSCC RNA-Seq tissue_normal CPT0232690009 406852fb-f047-4a47-a275-b99e3bca2710.rna_seq.chimeric.gdc_realn.bam 119741146 BAM chimeric c58dd741-d13a-4caf-8b55-40b1dd1f9f8b b6e393fbb2fe8f72e00e348a8df13b4a hg38 Solid Tissue Normal C3L-03961-07 -C3L-03961.RNA-Seq.chimeric.T.hg38 C3L-03961 LSCC RNA-Seq tumor CPT0232640009 730bd930-b8a0-4956-aaf4-4cfd3c1ad858.rna_seq.chimeric.gdc_realn.bam 32040204 BAM chimeric 717d1e18-934a-479a-8cab-e65d94513169 28197e94d1f326c8bb7480cdef09f918 hg38 Primary Tumor C3L-03961-02 C3L-03961.RNA-Seq.chimeric.T.hg38.deprecated C3L-03961 LSCC RNA-Seq tumor CPT0232670009 438c0e0e-30eb-4814-abc1-c30a6e69bed3.rna_seq.chimeric.gdc_realn.bam 165532666 BAM chimeric c3dab096-7b9c-4ff8-9626-5f51a85dbef5 70962f14d17daabb40e27339600c2f34 hg38 Primary Tumor C3L-03961-05 .deprecated +C3L-03961.RNA-Seq.chimeric.T.RRNA_rk5RkXK.hg38 C3L-03961 LSCC RNA-Seq tumor CPT0232640009 730bd930-b8a0-4956-aaf4-4cfd3c1ad858.rna_seq.chimeric.gdc_realn.bam 32040204 BAM chimeric 717d1e18-934a-479a-8cab-e65d94513169 28197e94d1f326c8bb7480cdef09f918 hg38 Primary Tumor C3L-03961-02 replacement_RNA RRNA_rk5RkXK Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-03961.RNA-Seq.genomic.A.hg38 C3L-03961 LSCC RNA-Seq tissue_normal CPT0232690009 406852fb-f047-4a47-a275-b99e3bca2710.rna_seq.genomic.gdc_realn.bam 9148611092 BAM genomic 20aea1eb-b2ca-4585-8ad2-a54db2539415 0e1c6d0f3cbdd37cfd44d677f95c3b88 hg38 Solid Tissue Normal C3L-03961-07 -C3L-03961.RNA-Seq.genomic.T.hg38 C3L-03961 LSCC RNA-Seq tumor CPT0232640009 730bd930-b8a0-4956-aaf4-4cfd3c1ad858.rna_seq.genomic.gdc_realn.bam 8243492565 BAM genomic 78a4e6b2-473f-43af-8831-17f338cd1007 3c2cadd462c123ef2615fd8e3ccac928 hg38 Primary Tumor C3L-03961-02 C3L-03961.RNA-Seq.genomic.T.hg38.deprecated C3L-03961 LSCC RNA-Seq tumor CPT0232670009 438c0e0e-30eb-4814-abc1-c30a6e69bed3.rna_seq.genomic.gdc_realn.bam 8968834752 BAM genomic 54ccc94c-8910-4442-a7c4-bf36929673eb 26153016cd852eceb117fd6df3034d3b hg38 Primary Tumor C3L-03961-05 .deprecated +C3L-03961.RNA-Seq.genomic.T.RRNA_rk5RkXK.hg38 C3L-03961 LSCC RNA-Seq tumor CPT0232640009 730bd930-b8a0-4956-aaf4-4cfd3c1ad858.rna_seq.genomic.gdc_realn.bam 8243492565 BAM genomic 78a4e6b2-473f-43af-8831-17f338cd1007 3c2cadd462c123ef2615fd8e3ccac928 hg38 Primary Tumor C3L-03961-02 replacement_RNA RRNA_rk5RkXK Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-03961.RNA-Seq.R1.A C3L-03961 LSCC RNA-Seq tissue_normal CPT0232690009 190208_UNC32-K00270_0146_BH3V2WBBXY_TAGCTT_S2_L007_R1_001.fastq.gz 4461119091 FASTQ NA f05b42a3-d863-44c6-977b-2b06cd34fc19 d90ed3d560552ef8eca3e6e10e39fa72 NA Solid Tissue Normal C3L-03961-07 -C3L-03961.RNA-Seq.R1.T C3L-03961 LSCC RNA-Seq tumor CPT0232640009 190501_UNC31-K00269_0213_BH5JYFBBXY_GGAGCGTC-GTCCGTGC_S26_L007_R1_001.fastq.gz 3927636537 FASTQ NA ba4d2ef4-56f6-4f5b-a4b8-994751624d3d 2ed32e0673882760b3c399b8c17f1f53 NA Primary Tumor C3L-03961-02 C3L-03961.RNA-Seq.R1.T.deprecated C3L-03961 LSCC RNA-Seq tumor CPT0232670009 190208_UNC32-K00270_0146_BH3V2WBBXY_AGTCAA_S6_L002_R1_001.fastq.gz 4028566384 FASTQ NA 0fb41a04-a113-43f8-bf41-3ebfeaa16b15 b9fbf8698eed600c4f151391333fd93b NA Primary Tumor C3L-03961-05 .deprecated +C3L-03961.RNA-Seq.R1.T.RRNA_rk5RkXK C3L-03961 LSCC RNA-Seq tumor CPT0232640009 190501_UNC31-K00269_0213_BH5JYFBBXY_GGAGCGTC-GTCCGTGC_S26_L007_R1_001.fastq.gz 3927636537 FASTQ NA ba4d2ef4-56f6-4f5b-a4b8-994751624d3d 2ed32e0673882760b3c399b8c17f1f53 NA Primary Tumor C3L-03961-02 replacement_RNA RRNA_rk5RkXK Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-03961.RNA-Seq.R2.A C3L-03961 LSCC RNA-Seq tissue_normal CPT0232690009 190208_UNC32-K00270_0146_BH3V2WBBXY_TAGCTT_S2_L007_R2_001.fastq.gz 4968859911 FASTQ NA 21c373d0-fde0-495e-8052-71de8db49d16 d2cbec6e154a268ecaf742ea9dd2fb37 NA Solid Tissue Normal C3L-03961-07 -C3L-03961.RNA-Seq.R2.T C3L-03961 LSCC RNA-Seq tumor CPT0232640009 190501_UNC31-K00269_0213_BH5JYFBBXY_GGAGCGTC-GTCCGTGC_S26_L007_R2_001.fastq.gz 4480904348 FASTQ NA b1cb4e71-5736-4e37-9529-47023207e048 1b639ead56f342c407ea3390b3c0f6a1 NA Primary Tumor C3L-03961-02 C3L-03961.RNA-Seq.R2.T.deprecated C3L-03961 LSCC RNA-Seq tumor CPT0232670009 190208_UNC32-K00270_0146_BH3V2WBBXY_AGTCAA_S6_L002_R2_001.fastq.gz 4378573275 FASTQ NA 52c04f81-ce8a-4377-bfd3-4c4bb0c2400a d28049aa8729a0249fafde2c80550945 NA Primary Tumor C3L-03961-05 .deprecated +C3L-03961.RNA-Seq.R2.T.RRNA_rk5RkXK C3L-03961 LSCC RNA-Seq tumor CPT0232640009 190501_UNC31-K00269_0213_BH5JYFBBXY_GGAGCGTC-GTCCGTGC_S26_L007_R2_001.fastq.gz 4480904348 FASTQ NA b1cb4e71-5736-4e37-9529-47023207e048 1b639ead56f342c407ea3390b3c0f6a1 NA Primary Tumor C3L-03961-02 replacement_RNA RRNA_rk5RkXK Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-03961.RNA-Seq.transcriptome.A.hg38 C3L-03961 LSCC RNA-Seq tissue_normal CPT0232690009 406852fb-f047-4a47-a275-b99e3bca2710.rna_seq.transcriptome.gdc_realn.bam 9236043539 BAM transcriptome 753a5634-eb65-4bc0-b000-47043696ca89 97d4bd783ae830cf15728038dd90e0b5 hg38 Solid Tissue Normal C3L-03961-07 -C3L-03961.RNA-Seq.transcriptome.T.hg38 C3L-03961 LSCC RNA-Seq tumor CPT0232640009 730bd930-b8a0-4956-aaf4-4cfd3c1ad858.rna_seq.transcriptome.gdc_realn.bam 9246777223 BAM transcriptome ef6aaf52-e824-451f-82df-ffecb526390a 5c2328952c0187017537e2df6f537c35 hg38 Primary Tumor C3L-03961-02 C3L-03961.RNA-Seq.transcriptome.T.hg38.deprecated C3L-03961 LSCC RNA-Seq tumor CPT0232670009 438c0e0e-30eb-4814-abc1-c30a6e69bed3.rna_seq.transcriptome.gdc_realn.bam 8341204098 BAM transcriptome 67564347-4539-4afc-a4f2-076685eae67c 4f66cd96c3b4eeff3c15a0aeffe0e1ca hg38 Primary Tumor C3L-03961-05 .deprecated +C3L-03961.RNA-Seq.transcriptome.T.RRNA_rk5RkXK.hg38 C3L-03961 LSCC RNA-Seq tumor CPT0232640009 730bd930-b8a0-4956-aaf4-4cfd3c1ad858.rna_seq.transcriptome.gdc_realn.bam 9246777223 BAM transcriptome ef6aaf52-e824-451f-82df-ffecb526390a 5c2328952c0187017537e2df6f537c35 hg38 Primary Tumor C3L-03961-02 replacement_RNA RRNA_rk5RkXK Duplicate item: Replacement RNA Distribution - original aliquot failed C3L-03961.WGS.N C3L-03961 LSCC WGS blood_normal CPT0232790002 CPT0232790002.WholeGenome.RP-1303.bam 56167827193 BAM NA 544d8452-b929-4ccf-8549-cc6e4fd538af f94dd472492a16e9343ed5fae782e265 hg19 Blood Derived Normal C3L-03961-31 C3L-03961.WGS.N.hg38 C3L-03961 LSCC WGS blood_normal CPT0232790002 dec7ca10-fdd0-4772-9083-99eb76cada5a_wgs_gdc_realn.bam 80586310895 BAM NA 5330bea7-b3fe-45b7-9078-1a99f80b2157 351564d652e783f01015357577e7d5b5 hg38 Blood Derived Normal C3L-03961-31 -C3L-03961.WGS.T C3L-03961 LSCC WGS tumor CPT0232640006 CPT0232640006.WholeGenome.RP-1303.bam 70426544869 BAM NA 9dddfa8a-ecc5-4dd8-9201-29841cf6afab 8eec59243fe148e575be67cc51cd9905 hg19 Primary Tumor C3L-03961-02 C3L-03961.WGS.T.deprecated C3L-03961 LSCC WGS tumor CPT0232670006 CPT0232670006.WholeGenome.RP-1303.bam 67575734614 BAM NA b49cb4b7-3c9b-45fe-ab8e-6fe4b4c050cd c33ac5b3408ceed7814e3484bd842095 hg19 Primary Tumor C3L-03961-05 .deprecated -C3L-03961.WGS.T.hg38 C3L-03961 LSCC WGS tumor CPT0232640006 3610bec5-9fcf-4587-8898-7af65b5599ce_wgs_gdc_realn.bam 100998187010 BAM NA 57467653-a720-43e9-b99b-da8a504a5bb7 a94b8b806142b5249ada5ef778ea3c9e hg38 Primary Tumor C3L-03961-02 C3L-03961.WGS.T.hg38.deprecated C3L-03961 LSCC WGS tumor CPT0232670006 be4f00b4-d05d-4ad9-a26a-cfb747526f9d_wgs_gdc_realn.bam 99628225275 BAM NA 6f42471c-c15b-48ca-8c9e-416365913a68 3fb1576762555eb259fd166d02269f54 hg38 Primary Tumor C3L-03961-05 .deprecated +C3L-03961.WGS.T.RDNA_o2KQ273 C3L-03961 LSCC WGS tumor CPT0232640006 CPT0232640006.WholeGenome.RP-1303.bam 70426544869 BAM NA 9dddfa8a-ecc5-4dd8-9201-29841cf6afab 8eec59243fe148e575be67cc51cd9905 hg19 Primary Tumor C3L-03961-02 replacement_DNA RDNA_o2KQ273 Duplicate item: Replacement DNA Distribution - original aliquot failed +C3L-03961.WGS.T.RDNA_o2KQ273.hg38 C3L-03961 LSCC WGS tumor CPT0232640006 3610bec5-9fcf-4587-8898-7af65b5599ce_wgs_gdc_realn.bam 100998187010 BAM NA 57467653-a720-43e9-b99b-da8a504a5bb7 a94b8b806142b5249ada5ef778ea3c9e hg38 Primary Tumor C3L-03961-02 replacement_DNA RDNA_o2KQ273 Duplicate item: Replacement DNA Distribution - original aliquot failed C3L-03961.WXS.A C3L-03961 LSCC WXS tissue_normal CPT0232690006 CPT0232690006.WholeExome.RP-1303.bam 25075624618 BAM NA 8e9a0757-992b-46bd-ba4b-943b48646b85 1e30e053003d31c9c40ec4108a0d29f0 hg19 Solid Tissue Normal C3L-03961-07 C3L-03961.WXS.A.hg38 C3L-03961 LSCC WXS tissue_normal CPT0232690006 0b891746-b74c-4d72-ac79-b4f385c34f54_wxs_gdc_realn.bam 34877308328 BAM NA b452c909-bc0e-4c55-a50f-49f96b91a0a0 a3dc708e7fd688bba2e7db313d7c2c8d hg38 Solid Tissue Normal C3L-03961-07 C3L-03961.WXS.N C3L-03961 LSCC WXS blood_normal CPT0232790002 CPT0232790002.WholeExome.RP-1303.bam 24451977536 BAM NA 8ebe01e0-1515-46cf-b690-e2742cf113be 3bc6d1f02a5ecda64d5bac2e1b1a30e6 hg19 Blood Derived Normal C3L-03961-31 C3L-03961.WXS.N.hg38 C3L-03961 LSCC WXS blood_normal CPT0232790002 dec7ca10-fdd0-4772-9083-99eb76cada5a_wxs_gdc_realn.bam 33319536001 BAM NA 4ad060d2-2819-4203-8e6c-92041543ab83 ce66852defa42082012b207a1b9afd17 hg38 Blood Derived Normal C3L-03961-31 -C3L-03961.WXS.T C3L-03961 LSCC WXS tumor CPT0232640006 CPT0232640006.WholeExome.RP-1303.bam 25059779985 BAM NA fa72b544-9148-4039-91b6-e2036467c1c0 43a4447e4081b8b4fa3bfc007a264889 hg19 Primary Tumor C3L-03961-02 C3L-03961.WXS.T.deprecated C3L-03961 LSCC WXS tumor CPT0232670006 CPT0232670006.WholeExome.RP-1303.bam 21760809510 BAM NA cfaaad4a-ab03-496d-a1bb-3a43654fa5df ffe192405ed641ae26e6964d67e1bd47 hg19 Primary Tumor C3L-03961-05 .deprecated -C3L-03961.WXS.T.hg38 C3L-03961 LSCC WXS tumor CPT0232640006 3610bec5-9fcf-4587-8898-7af65b5599ce_wxs_gdc_realn.bam 35196222802 BAM NA dfaf297d-c282-4eeb-8e2c-9f67d9c13b01 d88e70bf9ecb351572d149d7982d5046 hg38 Primary Tumor C3L-03961-02 C3L-03961.WXS.T.hg38.deprecated C3L-03961 LSCC WXS tumor CPT0232670006 be4f00b4-d05d-4ad9-a26a-cfb747526f9d_wxs_gdc_realn.bam 30127197737 BAM NA 07aaaf88-344a-4b44-b7ff-d160940d5dbc d11597f0f1f65121bd3b756bf2ef84e3 hg38 Primary Tumor C3L-03961-05 .deprecated +C3L-03961.WXS.T.RDNA_o2KQ273 C3L-03961 LSCC WXS tumor CPT0232640006 CPT0232640006.WholeExome.RP-1303.bam 25059779985 BAM NA fa72b544-9148-4039-91b6-e2036467c1c0 43a4447e4081b8b4fa3bfc007a264889 hg19 Primary Tumor C3L-03961-02 replacement_DNA RDNA_o2KQ273 Duplicate item: Replacement DNA Distribution - original aliquot failed +C3L-03961.WXS.T.RDNA_o2KQ273.hg38 C3L-03961 LSCC WXS tumor CPT0232640006 3610bec5-9fcf-4587-8898-7af65b5599ce_wxs_gdc_realn.bam 35196222802 BAM NA dfaf297d-c282-4eeb-8e2c-9f67d9c13b01 d88e70bf9ecb351572d149d7982d5046 hg38 Primary Tumor C3L-03961-02 replacement_DNA RDNA_o2KQ273 Duplicate item: Replacement DNA Distribution - original aliquot failed C3L-03962.MethArray.Green.A C3L-03962 LSCC Methylation Array tissue_normal CPT0233160006 203219650176_R06C01_Grn.idat 13676221 IDAT Green 4e88b7ac-1db6-4925-b29c-f711de8c48be 992ea1f4217521c5fff78ccf7bcd4ad7 NA Solid Tissue Normal C3L-03962-07 C3L-03962.MethArray.Green.T C3L-03962 LSCC Methylation Array tumor CPT0233120006 203219750071_R07C01_Grn.idat 13676226 IDAT Green 39b97d0b-f1a2-4cfc-bd46-901ef8ef1396 8952abdaaa2f7bf25013382a2c5886a4 NA Primary Tumor C3L-03962-03 C3L-03962.MethArray.Red.A C3L-03962 LSCC Methylation Array tissue_normal CPT0233160006 203219650176_R06C01_Red.idat 13676221 IDAT Red ae73dc70-a418-471d-b658-9697d6e5e6df 3b6ae4406861e6159b07a4ae2923c8d0 NA Solid Tissue Normal C3L-03962-07 @@ -15915,8 +15927,8 @@ C3N-00175.MethArray.Red.A C3N-00175 LUAD Methylation Array tissue_normal CPT0013 C3N-00175.MethArray.Red.T C3N-00175 LUAD Methylation Array tumor CPT0013880009 202176290047_R08C01_Red.idat 13676226 IDAT Red b02d3cfd-52a5-4bae-b312-f5263f538316 809923e347cbf9d0ecff3d2623604264 NA Primary Tumor C3N-00175-02 C3N-00175.miRNA-Seq.A C3N-00175 LUAD miRNA-Seq tissue_normal CPT0013910005 181108_UNC31-K00269_0163_BH23TVBBXY_TCGAAG_S47_L002_R1_001.unaln.bam 184453785 BAM NA 6dc7f348-15f1-4f04-b53a-53e057aadc29 8fcd44a111996702e9aeb782e6c09513 NA Solid Tissue Normal C3N-00175-06 C3N-00175.miRNA-Seq.A.hg38 C3N-00175 LUAD miRNA-Seq tissue_normal CPT0013910005 5d11923b-f615-4014-be9a-af3d007940bb_mirnaseq_gdc_realn.bam 208058778 BAM NA b9cc7c78-9002-438e-8a2c-6034344072c5 91d6f38301a9a892b9845b3ec592dbff hg38 Solid Tissue Normal C3N-00175-06 -C3N-00175.miRNA-Seq.T C3N-00175 LUAD miRNA-Seq tumor CPT0013880006 181012_UNC32-K00270_0124_AH223CBBXY_CAGGCG_S6_L005_R1_001.unaln.bam 214079390 BAM NA 2e545870-cd24-4067-a4de-72fbb531377a 9ff8709f05122cfeb5f09d0675429d21 NA Primary Tumor C3N-00175-02 -C3N-00175.miRNA-Seq.T.hg38 C3N-00175 LUAD miRNA-Seq tumor CPT0013880006 4d5dc10f-18e3-43b8-beb5-ed35bd62de6f_mirnaseq_gdc_realn.bam 234212759 BAM NA a4f1d4f6-a7d8-4d8b-a392-7785ff01386a 5389ba73efcf472b57b9a6b858067952 hg38 Primary Tumor C3N-00175-02 +C3N-00175.miRNA-Seq.T.ARNA_oQzEKz C3N-00175 LUAD miRNA-Seq tumor CPT0013880006 181012_UNC32-K00270_0124_AH223CBBXY_CAGGCG_S6_L005_R1_001.unaln.bam 214079390 BAM NA 2e545870-cd24-4067-a4de-72fbb531377a 9ff8709f05122cfeb5f09d0675429d21 NA Primary Tumor C3N-00175-02 additional_RNA ARNA_oQzEKz Duplicate item: Additional RNA requested +C3N-00175.miRNA-Seq.T.ARNA_oQzEKz.hg38 C3N-00175 LUAD miRNA-Seq tumor CPT0013880006 4d5dc10f-18e3-43b8-beb5-ed35bd62de6f_mirnaseq_gdc_realn.bam 234212759 BAM NA a4f1d4f6-a7d8-4d8b-a392-7785ff01386a 5389ba73efcf472b57b9a6b858067952 hg38 Primary Tumor C3N-00175-02 additional_RNA ARNA_oQzEKz Duplicate item: Additional RNA requested C3N-00175.RNA-Seq.chimeric.A.hg38 C3N-00175 LUAD RNA-Seq tissue_normal CPT0013910005 a3d80008-8f50-4674-afaf-4b8b50431460.rna_seq.chimeric.gdc_realn.bam 59277039 BAM chimeric dfc54e64-8c06-4f5a-beb5-0c2322eeab35 2b1d004cffc30ffeeb82051563d792b9 hg38 Solid Tissue Normal C3N-00175-06 C3N-00175.RNA-Seq.chimeric.T.hg38 C3N-00175 LUAD RNA-Seq tumor CPT0013880013 0209003e-2a15-48e7-bcd3-5ec3431db887.rna_seq.chimeric.gdc_realn.bam 46669317 BAM chimeric b1b9930d-d165-4bfd-b397-20d49c03921b dd878bb0e432778736b9a5d918a6818d hg38 Primary Tumor C3N-00175-02 C3N-00175.RNA-Seq.genomic.A.hg38 C3N-00175 LUAD RNA-Seq tissue_normal CPT0013910005 a3d80008-8f50-4674-afaf-4b8b50431460.rna_seq.genomic.gdc_realn.bam 7215778875 BAM genomic cbfe4fc0-fd9b-4def-a441-655cba21877e 97ca7a3f1c9e6f3c0a03c9ffd3a7eb5f hg38 Solid Tissue Normal C3N-00175-06 @@ -16096,8 +16108,8 @@ C3N-00194.WXS.T C3N-00194 CCRCC WXS tumor CPT0014160006 CPT0014160006.WholeExome C3N-00194.WXS.T.HET_BL42vN C3N-00194 CCRCC WXS tumor CPT0014180016 CPT0014180016.WholeExome.RP-1303.bam 17705252447 BAM NA 1e36b6c9-824c-430b-a1fa-77d176f03cbb dcbd5df4c0db50b6ee24f73e5caa1d9c hg19 Primary Tumor C3N-00194-04 heterogeneity HET_BL42vN Duplicate item: CCRCC Tumor heterogeneity study aliquot C3N-00194.WXS.T.HET_oQLVMY C3N-00194 CCRCC WXS tumor CPT0014150006 CPT0014150006.WholeExome.RP-1303.bam 17787615338 BAM NA 63d83032-60b8-4186-9fb9-780c884e37db 22fefd453fadac779a3382a86530287f hg19 Primary Tumor C3N-00194-01 heterogeneity HET_oQLVMY Duplicate item: CCRCC Tumor heterogeneity study aliquot C3N-00194.WXS.T.hg38 C3N-00194 CCRCC WXS tumor CPT0014160006 0b810b2c-1913-41fb-9c18-531ad23c35a2_gdc_realn.bam 33894653231 BAM NA 1062aea7-f6db-438c-88bb-1c8ccbaf7066 26b5815d77a0171e81439038174f8da9 hg38 Primary Tumor C3N-00194-02 -C3N-00198.MethArray.Green.T C3N-00198 PDA Methylation Array tumor CPT0014040006 202184990066_R06C01_Grn.idat 13676216 IDAT Green cd8be8ec-1e0b-446b-97f9-74c58f74b580 7e39b437a5f9e36013941655dc332aae NA Primary Tumor C3N-00198-02 -C3N-00198.MethArray.Red.T C3N-00198 PDA Methylation Array tumor CPT0014040006 202184990066_R06C01_Red.idat 13676216 IDAT Red f291da5d-56c4-4215-a72a-fa85d1315263 fb9ec17625e02a9115884fe1b5fb4bda NA Primary Tumor C3N-00198-02 +C3N-00198.MethArray.Green.T.DEEP_oQ5wQY C3N-00198 PDA Methylation Array tumor CPT0014040006 202184990066_R06C01_Grn.idat 13676216 IDAT Green cd8be8ec-1e0b-446b-97f9-74c58f74b580 7e39b437a5f9e36013941655dc332aae NA Primary Tumor C3N-00198-02 deep_sequencing DEEP_oQ5wQY Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-00198.MethArray.Red.T.DEEP_oQ5wQY C3N-00198 PDA Methylation Array tumor CPT0014040006 202184990066_R06C01_Red.idat 13676216 IDAT Red f291da5d-56c4-4215-a72a-fa85d1315263 fb9ec17625e02a9115884fe1b5fb4bda NA Primary Tumor C3N-00198-02 deep_sequencing DEEP_oQ5wQY Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00198.miRNA-Seq.T C3N-00198 PDA miRNA-Seq tumor CPT0014040009 181012_UNC32-K00270_0124_AH223CBBXY_ACTGAT_S45_L003_R1_001.unaln.bam 280177556 BAM NA fbe5b2e3-d209-4141-aa37-5475d8221eb1 40d6239697209fae500b5e12f18ee21c NA Primary Tumor C3N-00198-02 C3N-00198.miRNA-Seq.T.hg38 C3N-00198 PDA miRNA-Seq tumor CPT0014040009 5b4078bd-967e-4815-a12b-63c52731ac79_mirnaseq_gdc_realn.bam 306024194 BAM NA 84845c5b-6901-488a-a67f-1d260a6506ca 5e60aa8a7aaea487c82f5f5ee34d8564 hg38 Primary Tumor C3N-00198-02 C3N-00198.RNA-Seq.chimeric.A.hg38 C3N-00198 PDA RNA-Seq tissue_normal CPT0014060009 3cd2b803-ca88-4d1d-92fe-92f8ce26529e.rna_seq.chimeric.gdc_realn.bam 38904209 BAM chimeric 0ae842d2-7455-403b-bbd8-9aabf97cd617 10756ca74735473898139c1a4bcd92fa hg38 Solid Tissue Normal C3N-00198-06 @@ -16113,12 +16125,12 @@ C3N-00198.RNA-Seq.transcriptome.T.hg38 C3N-00198 PDA RNA-Seq tumor CPT0014040009 C3N-00198.Targeted.T C3N-00198 PDA Targeted Sequencing tumor CPT0014040006_1 CPT0014040006_1.CustomSelection.RP-1303.PDO-18786.bam 3574211891 BAM NA 074fd44b-5177-40fd-b5b1-93503afa6b7d 9eb80c2c462820d75d639017af0b1499 hg19 Primary Tumor C3N-00198-02 C3N-00198.WGS.N C3N-00198 PDA WGS blood_normal CPT0015030002 CPT0015030002.WholeGenome.RP-1303.bam 77690530641 BAM NA c03ce8f6-c95f-44de-88e3-013463cc2093 4c4e98e4067bb39b5e53215fdb11c8d9 hg19 Blood Derived Normal C3N-00198-31 C3N-00198.WGS.N.hg38 C3N-00198 PDA WGS blood_normal CPT0015030002 f4972f37-8e93-4689-b66e-f5dc681dc441_gdc_realn.bam 116213675033 BAM NA 48fa18a8-fcbd-4327-bc8c-fe5b78739810 65bb4e8d6bb85620ee73f02fd4dff3a9 hg38 Blood Derived Normal C3N-00198-31 -C3N-00198.WGS.T C3N-00198 PDA WGS tumor CPT0014040006 CPT0014040006.WholeGenome.RP-1303.bam 73503825918 BAM NA 31c9bf87-9618-4416-bc5d-523340f89e18 44edd90bf7902b0c886189ff22479dac hg19 Primary Tumor C3N-00198-02 -C3N-00198.WGS.T.hg38 C3N-00198 PDA WGS tumor CPT0014040006 83e23890-6d72-46bb-bfb2-2b37bca0908a_gdc_realn.bam 108570948517 BAM NA bed18881-eb35-444a-8337-54b38f1308f7 8dc023fc8d925d001b195ea4020f3c19 hg38 Primary Tumor C3N-00198-02 +C3N-00198.WGS.T.DEEP_oQ5wQY C3N-00198 PDA WGS tumor CPT0014040006 CPT0014040006.WholeGenome.RP-1303.bam 73503825918 BAM NA 31c9bf87-9618-4416-bc5d-523340f89e18 44edd90bf7902b0c886189ff22479dac hg19 Primary Tumor C3N-00198-02 deep_sequencing DEEP_oQ5wQY Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-00198.WGS.T.DEEP_oQ5wQY.hg38 C3N-00198 PDA WGS tumor CPT0014040006 83e23890-6d72-46bb-bfb2-2b37bca0908a_gdc_realn.bam 108570948517 BAM NA bed18881-eb35-444a-8337-54b38f1308f7 8dc023fc8d925d001b195ea4020f3c19 hg38 Primary Tumor C3N-00198-02 deep_sequencing DEEP_oQ5wQY Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00198.WXS.N C3N-00198 PDA WXS blood_normal CPT0015030002 CPT0015030002.WholeExome.RP-1303.bam 32136308667 BAM NA 5c7f1576-b0b2-4d49-8f83-ba8d97a39df5 480b052e5175d5f5cf37bf7369e74f5e hg19 Blood Derived Normal C3N-00198-31 C3N-00198.WXS.N.hg38 C3N-00198 PDA WXS blood_normal CPT0015030002 f4972f37-8e93-4689-b66e-f5dc681dc441_gdc_realn.bam 43813830812 BAM NA f52843cd-1e14-4700-9730-0e9a089211ce 2685891a454c96e095ddf593ee3c88d2 hg38 Blood Derived Normal C3N-00198-31 -C3N-00198.WXS.T C3N-00198 PDA WXS tumor CPT0014040006 CPT0014040006.WholeExome.RP-1303.bam 29888712685 BAM NA 685ce81f-0926-4cb9-b965-ebf47273a65e 5000658d6690d414bc6b6baf4bcc89f5 hg19 Primary Tumor C3N-00198-02 -C3N-00198.WXS.T.hg38 C3N-00198 PDA WXS tumor CPT0014040006 83e23890-6d72-46bb-bfb2-2b37bca0908a_gdc_realn.bam 41268545847 BAM NA 8a180028-4d0e-4ace-8fdf-46d354cd1148 495e59802eeabc86c2289ef5c3f0cd9a hg38 Primary Tumor C3N-00198-02 +C3N-00198.WXS.T.DEEP_oQ5wQY C3N-00198 PDA WXS tumor CPT0014040006 CPT0014040006.WholeExome.RP-1303.bam 29888712685 BAM NA 685ce81f-0926-4cb9-b965-ebf47273a65e 5000658d6690d414bc6b6baf4bcc89f5 hg19 Primary Tumor C3N-00198-02 deep_sequencing DEEP_oQ5wQY Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-00198.WXS.T.DEEP_oQ5wQY.hg38 C3N-00198 PDA WXS tumor CPT0014040006 83e23890-6d72-46bb-bfb2-2b37bca0908a_gdc_realn.bam 41268545847 BAM NA 8a180028-4d0e-4ace-8fdf-46d354cd1148 495e59802eeabc86c2289ef5c3f0cd9a hg38 Primary Tumor C3N-00198-02 deep_sequencing DEEP_oQ5wQY Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00198.WXS.T.hg38.high_cov C3N-00198 PDA WXS tumor CPT0014040006_1 ceb2062d-2258-49a6-91b3-723567d508b6_wxs_gdc_realn.bam 70339229416 BAM NA 623063b2-3df5-40e3-a25f-8acd1bc25d5e 8aa3a6a8209be11c497b6a02269506ad hg38 Primary Tumor C3N-00198-02 .high_cov C3N-00198.WXS.T.high_cov C3N-00198 PDA WXS tumor CPT0014040006_1 CPT0014040006_1.WholeExome.RP-1303.bam 51297996778 BAM NA be68f052-e665-4ef7-8dc8-f32d6491fa9a 1210e36d731b7c7ceb99b1ca37a8162e hg19 Primary Tumor C3N-00198-02 .high_cov C3N-00199.MethArray.Green.A C3N-00199 LUAD Methylation Array tissue_normal CPT0014290009 203027390081_R03C01_Grn.idat 13676226 IDAT Green 1b6aea35-4b7b-4b20-9e5c-6c9209e27564 bf15f2f1f0627a2a4b3dc6e9b67f2c65 NA Solid Tissue Normal C3N-00199-07 @@ -16349,8 +16361,8 @@ C3N-00242.MethArray.Red.A C3N-00242 CCRCC Methylation Array tissue_normal CPT001 C3N-00242.MethArray.Red.T C3N-00242 CCRCC Methylation Array tumor CPT0014450007 202163550115_R01C01_Red.idat 13676231 IDAT Red e973b5e7-d9b4-4b98-9511-ceaa758e6506 1ba6b2f1908070c9b702f0d234cc8385 NA Primary Tumor C3N-00242-01,C3N-00242-02 C3N-00242.miRNA-Seq.A C3N-00242 CCRCC miRNA-Seq tissue_normal CPT0014470006 181108_UNC31-K00269_0163_BH23TVBBXY_CATGGC_S34_L004_R1_001.unaln.bam 174296383 BAM NA c62ff64d-e23c-4e15-adf9-982456140bf3 319068623d770a023c640668b0a0d633 NA Solid Tissue Normal C3N-00242-06 C3N-00242.miRNA-Seq.A.hg38 C3N-00242 CCRCC miRNA-Seq tissue_normal CPT0014470006 79c4bebf-0333-45a4-af42-6b21aa4e0863_mirnaseq_gdc_realn.bam 191210722 BAM NA 045972c8-dcd1-43c7-b493-cf5134afdade 592282cbb40640674419f3ba60f01c00 hg38 Solid Tissue Normal C3N-00242-06 -C3N-00242.miRNA-Seq.T C3N-00242 CCRCC miRNA-Seq tumor CPT0014450010 181113_UNC31-K00269_0164_AH23NNBBXY_CCGTCC_S40_L004_R1_001.unaln.bam 296093900 BAM NA 047721f8-2d41-4cea-9513-70aa29ce4dae e847b0f98c9dec6d657a7a947fc1cb64 NA Primary Tumor C3N-00242-01,C3N-00242-02 -C3N-00242.miRNA-Seq.T.hg38 C3N-00242 CCRCC miRNA-Seq tumor CPT0014450010 2ce08b9c-36dd-4c3e-ad85-70fd9936bb3e_mirnaseq_gdc_realn.bam 323991248 BAM NA 85340479-8cdd-4717-92dc-f0ac99912d06 69c3f5c0ca2edb437a7fabca5bbe3935 hg38 Primary Tumor C3N-00242-01,C3N-00242-02 +C3N-00242.miRNA-Seq.T.ARNA_voPyPL C3N-00242 CCRCC miRNA-Seq tumor CPT0014450010 181113_UNC31-K00269_0164_AH23NNBBXY_CCGTCC_S40_L004_R1_001.unaln.bam 296093900 BAM NA 047721f8-2d41-4cea-9513-70aa29ce4dae e847b0f98c9dec6d657a7a947fc1cb64 NA Primary Tumor C3N-00242-01,C3N-00242-02 additional_RNA ARNA_voPyPL Duplicate item: Additional RNA requested +C3N-00242.miRNA-Seq.T.ARNA_voPyPL.hg38 C3N-00242 CCRCC miRNA-Seq tumor CPT0014450010 2ce08b9c-36dd-4c3e-ad85-70fd9936bb3e_mirnaseq_gdc_realn.bam 323991248 BAM NA 85340479-8cdd-4717-92dc-f0ac99912d06 69c3f5c0ca2edb437a7fabca5bbe3935 hg38 Primary Tumor C3N-00242-01,C3N-00242-02 additional_RNA ARNA_voPyPL Duplicate item: Additional RNA requested C3N-00242.RNA-Seq.chimeric.A.hg38 C3N-00242 CCRCC RNA-Seq tissue_normal CPT0014470006 53d41184-2050-4997-9371-8c5097050656.rna_seq.chimeric.gdc_realn.bam 87819096 BAM chimeric 9ce8a48c-da42-4dd3-916d-2fe2151fc4dd 6f1eb6a2758afec88ef4a0cd35bc57d3 hg38 Solid Tissue Normal C3N-00242-06 C3N-00242.RNA-Seq.chimeric.T.hg38 C3N-00242 CCRCC RNA-Seq tumor CPT0014450014 39cbd516-d9f1-45af-9e80-20e86cc0a497.rna_seq.chimeric.gdc_realn.bam 87217395 BAM chimeric 851179a5-5e82-426e-b2e5-550ae60b3826 ad9f1781a48bc3c0c77798ffa88d32f1 hg38 Primary Tumor C3N-00242-01,C3N-00242-02 C3N-00242.RNA-Seq.genomic.A.hg38 C3N-00242 CCRCC RNA-Seq tissue_normal CPT0014470006 53d41184-2050-4997-9371-8c5097050656.rna_seq.genomic.gdc_realn.bam 8773192682 BAM genomic d514fce5-488d-45ad-859d-de8cc3b4706a a9ba78c76ad720c08bb6af8e56e2c0cf hg38 Solid Tissue Normal C3N-00242-06 @@ -16436,9 +16448,9 @@ C3N-00247.WXS.N.hg38 C3N-00247 LSCC WXS blood_normal CPT0091400002 864d0707-63aa C3N-00247.WXS.T C3N-00247 LSCC WXS tumor CPT0089880009 CPT0089880009.WholeExome.RP-1303.bam 34798795077 BAM NA d08e9bd0-9c41-4f0f-823b-e52caaaa69da 0f5c8a5c50abe4b976e01609a6a311a2 hg19 Primary Tumor C3N-00247-02 C3N-00247.WXS.T.hg38 C3N-00247 LSCC WXS tumor CPT0089880009 d8775fea-842f-49cd-a59c-e95128566a32_wxs_gdc_realn.bam 46450438706 BAM NA 65e5941b-b9fc-4c60-bb22-61730bf216fa 20fe6cb51f360f2af429cb4049e3ba04 hg38 Primary Tumor C3N-00247-02 C3N-00249.MethArray.Green.A C3N-00249 PDA Methylation Array tissue_normal CPT0025760006 203561450014_R08C01_Grn.idat 13676216 IDAT Green 0decb80a-8d2c-43b8-99b9-c53591984f7a c44a7a4916826031c6147940e62c80b1 NA Solid Tissue Normal C3N-00249-06 -C3N-00249.MethArray.Green.T C3N-00249 PDA Methylation Array tumor CPT0025750009 202176300001_R03C01_Grn.idat 13676216 IDAT Green e95862d8-e689-4f6a-94c8-3ba08946ff88 8f7c3fe279cb689237a81bdc2cb7afae NA Primary Tumor C3N-00249-03 +C3N-00249.MethArray.Green.T.DEEP_rmjXr6 C3N-00249 PDA Methylation Array tumor CPT0025750009 202176300001_R03C01_Grn.idat 13676216 IDAT Green e95862d8-e689-4f6a-94c8-3ba08946ff88 8f7c3fe279cb689237a81bdc2cb7afae NA Primary Tumor C3N-00249-03 deep_sequencing DEEP_rmjXr6 Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00249.MethArray.Red.A C3N-00249 PDA Methylation Array tissue_normal CPT0025760006 203561450014_R08C01_Red.idat 13676216 IDAT Red 0a627e8e-b19b-4cd6-b8f1-bc6ee7254cdd 03b03c71b945ebc7fdfbfbd1e685af2a NA Solid Tissue Normal C3N-00249-06 -C3N-00249.MethArray.Red.T C3N-00249 PDA Methylation Array tumor CPT0025750009 202176300001_R03C01_Red.idat 13676216 IDAT Red ea453dcc-542b-46f0-a943-d6673ebcd047 0fbaa01e0f4b8ff60dd95474ff3e3e70 NA Primary Tumor C3N-00249-03 +C3N-00249.MethArray.Red.T.DEEP_rmjXr6 C3N-00249 PDA Methylation Array tumor CPT0025750009 202176300001_R03C01_Red.idat 13676216 IDAT Red ea453dcc-542b-46f0-a943-d6673ebcd047 0fbaa01e0f4b8ff60dd95474ff3e3e70 NA Primary Tumor C3N-00249-03 deep_sequencing DEEP_rmjXr6 Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00249.miRNA-Seq.T C3N-00249 PDA miRNA-Seq tumor CPT0025750006 180924_UNC31-K00269_0154_AHWTMLBBXX_GTCCGC_S13_L001_R1_001.unaln.bam 235376558 BAM NA ef93cf21-8cc6-41ad-a7d6-ecc4466c3c3f c21deef9ae25d8c8e52a4a1663b52e40 NA Primary Tumor C3N-00249-03 C3N-00249.miRNA-Seq.T.hg38 C3N-00249 PDA miRNA-Seq tumor CPT0025750006 c39fb7e7-f6f6-4d87-a064-e8aedde885cb_mirnaseq_gdc_realn.bam 257255576 BAM NA c97c42bc-a767-4336-8cf3-466491f10cbb 63743813547fc5336334aad07db9d685 hg38 Primary Tumor C3N-00249-03 C3N-00249.RNA-Seq.chimeric.T.hg38 C3N-00249 PDA RNA-Seq tumor CPT0025750006 c0d29ef9-858d-4b65-a27d-d64f5f8a3ba9.rna_seq.chimeric.gdc_realn.bam 65056641 BAM chimeric 8a715310-673f-4f64-bf38-9733260cbf76 8d042ee3aa48b9aa0e59d7e431571ea9 hg38 Primary Tumor C3N-00249-03 @@ -16451,14 +16463,14 @@ C3N-00249.WGS.A C3N-00249 PDA WGS tissue_normal CPT0025760006 CPT0025760006.Whol C3N-00249.WGS.A.hg38 C3N-00249 PDA WGS tissue_normal CPT0025760006 06e41ea8-02fb-402b-ad68-51acac08b514_wgs_gdc_realn.bam 84152106557 BAM NA 5dc33b42-8c3b-442f-8ad9-9b34ffc488c0 1a78a75dbb634b62a39aa9571cad5719 hg38 Solid Tissue Normal C3N-00249-06 C3N-00249.WGS.N C3N-00249 PDA WGS blood_normal CPT0028460002 CPT0028460002.WholeGenome.RP-1303.bam 67483151876 BAM NA 00b73968-3184-453e-9f8b-0d8c066f9de3 ba4529efbdb8cd141770f57e65ff10bf hg19 Blood Derived Normal C3N-00249-31 C3N-00249.WGS.N.hg38 C3N-00249 PDA WGS blood_normal CPT0028460002 665f6e49-5c68-43f5-9fe9-67ab623e3bce_gdc_realn.bam 99588228315 BAM NA 0db8bf92-5008-4807-96a7-940e4e22fadc fbf71fd07516f2b2e9a310dd826b8994 hg38 Blood Derived Normal C3N-00249-31 -C3N-00249.WGS.T C3N-00249 PDA WGS tumor CPT0025750009 CPT0025750009.WholeGenome.RP-1303.bam 64051533577 BAM NA 4610bba5-9c31-4bd5-88a3-7ffcbf578b8d 9e9b3a42f0052a04d7e34336c0934a4e hg19 Primary Tumor C3N-00249-03 -C3N-00249.WGS.T.hg38 C3N-00249 PDA WGS tumor CPT0025750009 4fc51e70-9dc7-4a0f-af5b-f45bbbaa9292_gdc_realn.bam 94969894851 BAM NA e6177b15-f150-4565-88e8-f26bb0e6e33a e4e17166e04b38fd4fe39d9c984c0a34 hg38 Primary Tumor C3N-00249-03 +C3N-00249.WGS.T.DEEP_rmjXr6 C3N-00249 PDA WGS tumor CPT0025750009 CPT0025750009.WholeGenome.RP-1303.bam 64051533577 BAM NA 4610bba5-9c31-4bd5-88a3-7ffcbf578b8d 9e9b3a42f0052a04d7e34336c0934a4e hg19 Primary Tumor C3N-00249-03 deep_sequencing DEEP_rmjXr6 Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-00249.WGS.T.DEEP_rmjXr6.hg38 C3N-00249 PDA WGS tumor CPT0025750009 4fc51e70-9dc7-4a0f-af5b-f45bbbaa9292_gdc_realn.bam 94969894851 BAM NA e6177b15-f150-4565-88e8-f26bb0e6e33a e4e17166e04b38fd4fe39d9c984c0a34 hg38 Primary Tumor C3N-00249-03 deep_sequencing DEEP_rmjXr6 Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00249.WXS.A C3N-00249 PDA WXS tissue_normal CPT0025760006 CPT0025760006.WholeExome.RP-1303.bam 30825757153 BAM NA c90b3e9b-c9a4-4388-ad0b-efdb6cb4459d 5db6de3294c4bdd916c0df06e7c3192e hg19 Solid Tissue Normal C3N-00249-06 C3N-00249.WXS.A.hg38 C3N-00249 PDA WXS tissue_normal CPT0025760006 06e41ea8-02fb-402b-ad68-51acac08b514_wxs_gdc_realn.bam 42000679581 BAM NA 51f575fc-40d7-4916-849f-38cb3e3f1243 d393ed882568a27b0473a84bd1754cb0 hg38 Solid Tissue Normal C3N-00249-06 C3N-00249.WXS.N C3N-00249 PDA WXS blood_normal CPT0028460002 CPT0028460002.WholeExome.RP-1303.bam 35300601184 BAM NA 6a8b0cdc-4ac0-4a38-a9b5-08860a9e89b3 e297e0a8d12d08d57f43c0e73cf9fd9b hg19 Blood Derived Normal C3N-00249-31 C3N-00249.WXS.N.hg38 C3N-00249 PDA WXS blood_normal CPT0028460002 665f6e49-5c68-43f5-9fe9-67ab623e3bce_gdc_realn.bam 48891080490 BAM NA aecbcc77-6390-477c-83f1-2736964af1eb 40f19cc4105e39d45cb430e984f1595f hg38 Blood Derived Normal C3N-00249-31 -C3N-00249.WXS.T C3N-00249 PDA WXS tumor CPT0025750009 CPT0025750009.WholeExome.RP-1303.bam 24358776304 BAM NA 68ab025a-49f8-402e-927d-bb1bfda16f4c 8b1bfb6d51427e62ef7d8bbfaacfc4ae hg19 Primary Tumor C3N-00249-03 -C3N-00249.WXS.T.hg38 C3N-00249 PDA WXS tumor CPT0025750009 4fc51e70-9dc7-4a0f-af5b-f45bbbaa9292_gdc_realn.bam 33380327861 BAM NA 130c5bb4-e44a-497f-89eb-a95af0ccbc71 63c66cdb00f184b481ebf7678ac04274 hg38 Primary Tumor C3N-00249-03 +C3N-00249.WXS.T.DEEP_rmjXr6 C3N-00249 PDA WXS tumor CPT0025750009 CPT0025750009.WholeExome.RP-1303.bam 24358776304 BAM NA 68ab025a-49f8-402e-927d-bb1bfda16f4c 8b1bfb6d51427e62ef7d8bbfaacfc4ae hg19 Primary Tumor C3N-00249-03 deep_sequencing DEEP_rmjXr6 Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-00249.WXS.T.DEEP_rmjXr6.hg38 C3N-00249 PDA WXS tumor CPT0025750009 4fc51e70-9dc7-4a0f-af5b-f45bbbaa9292_gdc_realn.bam 33380327861 BAM NA 130c5bb4-e44a-497f-89eb-a95af0ccbc71 63c66cdb00f184b481ebf7678ac04274 hg38 Primary Tumor C3N-00249-03 deep_sequencing DEEP_rmjXr6 Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00249.WXS.T.hg38.high_cov C3N-00249 PDA WXS tumor CPT0025750009_1 d54a354f-a303-4689-9f1b-fba719fd79ef_wxs_gdc_realn.bam 66309173337 BAM NA d7865025-7006-4123-a5bd-7d717fa971e1 10dc823d82e89de5363e9a112bc3619a hg38 Primary Tumor C3N-00249-03 .high_cov C3N-00249.WXS.T.high_cov C3N-00249 PDA WXS tumor CPT0025750009_1 CPT0025750009_1.WholeExome.RP-1303.bam 48565101006 BAM NA a8fa94a4-714f-41d2-9166-bc9a8b953af3 2d176052c439f250e553e3921379e58e hg19 Primary Tumor C3N-00249-03 .high_cov C3N-00293.MethArray.Green.A C3N-00293 LUAD Methylation Array tissue_normal CPT0008420009 203028200104_R01C01_Grn.idat 13676235 IDAT Green e4dae9a4-8fa6-487d-8d72-cec1fe0f3658 74f7e68def08bed2809650d5051e49a0 NA Solid Tissue Normal C3N-00293-05 @@ -16577,8 +16589,8 @@ C3N-00300.WXS.N C3N-00300 HNSCC WXS blood_normal CPT0008730002 CPT0008730002.Who C3N-00300.WXS.N.hg38 C3N-00300 HNSCC WXS blood_normal CPT0008730002 d8c0a370-514b-424d-84bc-536a64b6853e_gdc_realn.bam 38549566543 BAM NA 8fc15c91-69d1-41bb-97be-03f53392d71b 9f6259aca26011065f90dca28c146791 hg38 Blood Derived Normal C3N-00300-31 C3N-00300.WXS.T C3N-00300 HNSCC WXS tumor CPT0008680006 CPT0008680006.WholeExome.RP-1303.bam 22692737884 BAM NA 25654329-8444-443b-a15f-e41fac48c0a0 baed79eb909ecc07992863eb578cac2c hg19 Primary Tumor C3N-00300-01 C3N-00300.WXS.T.hg38 C3N-00300 HNSCC WXS tumor CPT0008680006 2c1aca99-82f6-4e30-8b16-868b81fdb845_gdc_realn.bam 31083528658 BAM NA ed34bc86-1584-49d1-adcd-703965b28c5b c02caca989eb89c4f34c034be32d53ee hg38 Primary Tumor C3N-00300-01 -C3N-00302.MethArray.Green.T C3N-00302 PDA Methylation Array tumor CPT0008750012 202184900148_R06C01_Grn.idat 13676246 IDAT Green c833c77d-68ef-4fa7-9ea8-51f8e0d3747a c4d1e1f1e387962b211398a4b350bb3d NA Primary Tumor C3N-00302-02 -C3N-00302.MethArray.Red.T C3N-00302 PDA Methylation Array tumor CPT0008750012 202184900148_R06C01_Red.idat 13676246 IDAT Red 2d13c5a4-f1de-48a0-abec-d3f45f9649dd d42872257f96999fb4228275e4f95d8a NA Primary Tumor C3N-00302-02 +C3N-00302.MethArray.Green.T.DEEP_xGLgAP C3N-00302 PDA Methylation Array tumor CPT0008750012 202184900148_R06C01_Grn.idat 13676246 IDAT Green c833c77d-68ef-4fa7-9ea8-51f8e0d3747a c4d1e1f1e387962b211398a4b350bb3d NA Primary Tumor C3N-00302-02 deep_sequencing DEEP_xGLgAP Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-00302.MethArray.Red.T.DEEP_xGLgAP C3N-00302 PDA Methylation Array tumor CPT0008750012 202184900148_R06C01_Red.idat 13676246 IDAT Red 2d13c5a4-f1de-48a0-abec-d3f45f9649dd d42872257f96999fb4228275e4f95d8a NA Primary Tumor C3N-00302-02 deep_sequencing DEEP_xGLgAP Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00302.miRNA-Seq.T C3N-00302 PDA miRNA-Seq tumor CPT0008750009 181012_UNC32-K00270_0124_AH223CBBXY_CTAGCT_S11_L003_R1_001.unaln.bam 260612851 BAM NA 0196b828-604c-4241-b9ed-bf98ced75253 8198ce1672679cb78b429dc3caf8c7b7 NA Primary Tumor C3N-00302-02 C3N-00302.miRNA-Seq.T.hg38 C3N-00302 PDA miRNA-Seq tumor CPT0008750009 fa0d00a2-2539-45d5-af97-36f333c01e07_mirnaseq_gdc_realn.bam 280982993 BAM NA b58c9eb1-8660-4be2-b0b0-47e0013637d1 613e24ee2de414df99d7ff65a3ea804c hg38 Primary Tumor C3N-00302-02 C3N-00302.RNA-Seq.chimeric.T.hg38 C3N-00302 PDA RNA-Seq tumor CPT0008750009 f8ff4011-c015-46af-8cf2-f12393168a35.rna_seq.chimeric.gdc_realn.bam 69110545 BAM chimeric 6d74136f-d053-4b80-bb6d-2062c262bd13 e76849d01f8e5a407955152a21f18c31 hg38 Primary Tumor C3N-00302-02 @@ -16588,12 +16600,12 @@ C3N-00302.RNA-Seq.R2.T C3N-00302 PDA RNA-Seq tumor CPT0008750009 170802_UNC31-K0 C3N-00302.RNA-Seq.transcriptome.T.hg38 C3N-00302 PDA RNA-Seq tumor CPT0008750009 f8ff4011-c015-46af-8cf2-f12393168a35.rna_seq.transcriptome.gdc_realn.bam 7890128948 BAM transcriptome 7d4518bb-632a-44e9-be39-7e89fbaf1a20 f5ccf85c0676d8a5eb2084d3be54a083 hg38 Primary Tumor C3N-00302-02 C3N-00302.WGS.N C3N-00302 PDA WGS blood_normal CPT0008790002 CPT0008790002.WholeGenome.RP-1303.bam 76432662163 BAM NA 7947cc1b-413c-4d33-9edd-d838b88b8b5e 43ace2add928eb51cfc8453d0e39ffd9 hg19 Blood Derived Normal C3N-00302-31 C3N-00302.WGS.N.hg38 C3N-00302 PDA WGS blood_normal CPT0008790002 330ca867-0583-4f3f-bd1b-03969b6a3ad3_gdc_realn.bam 113574527429 BAM NA 7f1601c1-dc72-4989-b752-a7e76fe983d3 fa8759c361842eb45b6f3bcab65c3942 hg38 Blood Derived Normal C3N-00302-31 -C3N-00302.WGS.T C3N-00302 PDA WGS tumor CPT0008750012 CPT0008750012.WholeGenome.RP-1303.bam 65241648925 BAM NA 90cd7889-cead-4525-8c40-7117a68fe456 44cd94489e7f24c9bdc3199e69b3aaef hg19 Primary Tumor C3N-00302-02 -C3N-00302.WGS.T.hg38 C3N-00302 PDA WGS tumor CPT0008750012 c702097d-4a63-4f18-9928-c89d27fcfaaf_gdc_realn.bam 98394166226 BAM NA bdb0f4c0-d499-459a-9cdf-9f5df1d56b67 a5a3a1b989022c748adc33a90bfbccc6 hg38 Primary Tumor C3N-00302-02 +C3N-00302.WGS.T.DEEP_xGLgAP C3N-00302 PDA WGS tumor CPT0008750012 CPT0008750012.WholeGenome.RP-1303.bam 65241648925 BAM NA 90cd7889-cead-4525-8c40-7117a68fe456 44cd94489e7f24c9bdc3199e69b3aaef hg19 Primary Tumor C3N-00302-02 deep_sequencing DEEP_xGLgAP Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-00302.WGS.T.DEEP_xGLgAP.hg38 C3N-00302 PDA WGS tumor CPT0008750012 c702097d-4a63-4f18-9928-c89d27fcfaaf_gdc_realn.bam 98394166226 BAM NA bdb0f4c0-d499-459a-9cdf-9f5df1d56b67 a5a3a1b989022c748adc33a90bfbccc6 hg38 Primary Tumor C3N-00302-02 deep_sequencing DEEP_xGLgAP Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00302.WXS.N C3N-00302 PDA WXS blood_normal CPT0008790002 CPT0008790002.WholeExome.RP-1303.bam 28695065956 BAM NA 485d8560-03e7-4a71-afa0-f9532a0b19ec 82fe8b905d4f3188fc01a227347b94b6 hg19 Blood Derived Normal C3N-00302-31 C3N-00302.WXS.N.hg38 C3N-00302 PDA WXS blood_normal CPT0008790002 330ca867-0583-4f3f-bd1b-03969b6a3ad3_gdc_realn.bam 39347880814 BAM NA 90173e9e-8c68-4277-a8f6-416a34591e86 891900593c7cd6c6eda99edf1a7c14a2 hg38 Blood Derived Normal C3N-00302-31 -C3N-00302.WXS.T C3N-00302 PDA WXS tumor CPT0008750012 CPT0008750012.WholeExome.RP-1303.bam 35820800270 BAM NA fb534c3d-f92a-4c20-82c6-a54fab71e878 db8c9b7b5e339f3e1aa62b9173740fc6 hg19 Primary Tumor C3N-00302-02 -C3N-00302.WXS.T.hg38 C3N-00302 PDA WXS tumor CPT0008750012 c702097d-4a63-4f18-9928-c89d27fcfaaf_gdc_realn.bam 48622399305 BAM NA 7edc91e9-a711-47ab-9faf-4944b4419e0a f2885515057a5f599297779009ffbf8d hg38 Primary Tumor C3N-00302-02 +C3N-00302.WXS.T.DEEP_xGLgAP C3N-00302 PDA WXS tumor CPT0008750012 CPT0008750012.WholeExome.RP-1303.bam 35820800270 BAM NA fb534c3d-f92a-4c20-82c6-a54fab71e878 db8c9b7b5e339f3e1aa62b9173740fc6 hg19 Primary Tumor C3N-00302-02 deep_sequencing DEEP_xGLgAP Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-00302.WXS.T.DEEP_xGLgAP.hg38 C3N-00302 PDA WXS tumor CPT0008750012 c702097d-4a63-4f18-9928-c89d27fcfaaf_gdc_realn.bam 48622399305 BAM NA 7edc91e9-a711-47ab-9faf-4944b4419e0a f2885515057a5f599297779009ffbf8d hg38 Primary Tumor C3N-00302-02 deep_sequencing DEEP_xGLgAP Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00302.WXS.T.hg38.high_cov C3N-00302 PDA WXS tumor CPT0008750012_1 34833257-46da-4477-8c58-38147bae6628_wxs_gdc_realn.bam 81267573344 BAM NA be134e69-4b41-4997-b9a8-a47b7dc533c7 3d3da26c8c4914eb28fd9147c6d30928 hg38 Primary Tumor C3N-00302-02 .high_cov C3N-00302.WXS.T.high_cov C3N-00302 PDA WXS tumor CPT0008750012_1 CPT0008750012_1.WholeExome.RP-1303.bam 59806493861 BAM NA 2c673b46-8385-42ca-8ca0-5b72fe8dda7c 82cb113f420cebc609e9973bd51afc26 hg19 Primary Tumor C3N-00302-02 .high_cov C3N-00303.MethArray.Green.T.deprecated C3N-00303 PDA Methylation Array tumor CPT0008800006 202163550076_R05C01_Grn.idat 13676226 IDAT Green 7d65186f-cd31-4533-82a3-474815992abf c0d4d45ea4851c27e4a5ceb195b9ea46 NA Primary Tumor C3N-00303-01 .deprecated @@ -17212,8 +17224,8 @@ C3N-00340.WXS.T C3N-00340 UCEC WXS tumor CPT0022620006 CPT0022620006.WholeExome. C3N-00340.WXS.T.hg38 C3N-00340 UCEC WXS tumor CPT0022620006 bdc0043c-0eb0-4495-9620-7ede4bac168c_gdc_realn.bam 31790294330 BAM NA 8c0129ea-4649-403e-9a53-2853c81782f0 626f0ecc6eb43935d182c32939787d16 hg38 Primary Tumor C3N-00340-03 C3N-00377.MethArray.Green.T C3N-00377 UCEC Methylation Array tumor CPT0021650009 202178770111_R02C01_Grn.idat 13676231 IDAT Green 1d9c8cbc-c76b-4122-998b-87193e4b0bf7 f3e06ecff3c4d3ad843faf88ece826e3 NA Primary Tumor C3N-00377-02 C3N-00377.MethArray.Red.T C3N-00377 UCEC Methylation Array tumor CPT0021650009 202178770111_R02C01_Red.idat 13676231 IDAT Red e875e261-9713-466a-b7bb-e6f460fa8270 25e6b3e80f7b800c6aa34f61e4aab60f NA Primary Tumor C3N-00377-02 -C3N-00377.miRNA-Seq.T C3N-00377 UCEC miRNA-Seq tumor CPT0021650006 181012_UNC32-K00270_0124_AH223CBBXY_CTTGTA_S33_L004_R1_001.unaln.bam 230161002 BAM NA e1187496-38da-40c6-9198-de1d986b913c aa8c449632276952ba7d9b52684f64c0 NA Primary Tumor C3N-00377-02 -C3N-00377.miRNA-Seq.T.hg38 C3N-00377 UCEC miRNA-Seq tumor CPT0021650006 4c94aef0-feb3-4b36-b713-4a95a0304f86_mirnaseq_gdc_realn.bam 258615587 BAM NA 256d0167-27f8-43e8-b020-0262c620d57f 0785ff56bb75f3babbd4d862a957852e hg38 Primary Tumor C3N-00377-02 +C3N-00377.miRNA-Seq.T.ARNA_oZLjGB C3N-00377 UCEC miRNA-Seq tumor CPT0021650006 181012_UNC32-K00270_0124_AH223CBBXY_CTTGTA_S33_L004_R1_001.unaln.bam 230161002 BAM NA e1187496-38da-40c6-9198-de1d986b913c aa8c449632276952ba7d9b52684f64c0 NA Primary Tumor C3N-00377-02 additional_RNA ARNA_oZLjGB Duplicate item: Additional RNA requested +C3N-00377.miRNA-Seq.T.ARNA_oZLjGB.hg38 C3N-00377 UCEC miRNA-Seq tumor CPT0021650006 4c94aef0-feb3-4b36-b713-4a95a0304f86_mirnaseq_gdc_realn.bam 258615587 BAM NA 256d0167-27f8-43e8-b020-0262c620d57f 0785ff56bb75f3babbd4d862a957852e hg38 Primary Tumor C3N-00377-02 additional_RNA ARNA_oZLjGB Duplicate item: Additional RNA requested C3N-00377.RNA-Seq.chimeric.T.hg38 C3N-00377 UCEC RNA-Seq tumor CPT0021650013 f963e1fb-4a1c-48bc-87ff-5e86eb9ccde6.rna_seq.chimeric.gdc_realn.bam 56444673 BAM chimeric 3f48e682-c93e-410e-8004-d7ef23f2377e 5f7883435aef5f5333567778d3d01cb2 hg38 Primary Tumor C3N-00377-02 C3N-00377.RNA-Seq.genomic.T.hg38 C3N-00377 UCEC RNA-Seq tumor CPT0021650013 f963e1fb-4a1c-48bc-87ff-5e86eb9ccde6.rna_seq.genomic.gdc_realn.bam 8563851029 BAM genomic 9ce9bd04-bd43-4602-bc1c-cad9b68c64ac 263edb7a7a1356836f656a3222326d66 hg38 Primary Tumor C3N-00377-02 C3N-00377.RNA-Seq.R1.T C3N-00377 UCEC RNA-Seq tumor CPT0021650013 171011_UNC31-K00269_0086_AHLJLCBBXX_GTGGCC_S8_L003_R1_001.fastq.gz 4517871402 FASTQ NA 927fd63f-62e5-491b-8c64-bdb58cb0881c 874266381c0435be1d3049f93eb1aa43 NA Primary Tumor C3N-00377-02 @@ -17840,8 +17852,8 @@ C3N-00498.WXS.N C3N-00498 HNSCC WXS blood_normal CPT0013090002 CPT0013090002.Who C3N-00498.WXS.N.hg38 C3N-00498 HNSCC WXS blood_normal CPT0013090002 ae19af2b-2847-48a7-bbd8-413c8b0d3720_gdc_realn.bam 36792148788 BAM NA f2f1e455-e8d9-4c87-bbdd-825a120412f8 7914735344e0115029d1800a1576620b hg38 Blood Derived Normal C3N-00498-31 C3N-00498.WXS.T C3N-00498 HNSCC WXS tumor CPT0013000010 CPT0013000010.WholeExome.RP-1303.bam 28240147139 BAM NA 5901772f-3414-4e8a-a8a7-075a6a0189ac 8c0ab16be651721dcb581e1afc57924e hg19 Primary Tumor C3N-00498-02,C3N-00498-04 C3N-00498.WXS.T.hg38 C3N-00498 HNSCC WXS tumor CPT0013000010 2d6748ff-846e-4f6c-9278-22f421c7a32a_gdc_realn.bam 38213325801 BAM NA 151bbb75-0700-4d1c-9896-a85f566a0e7b 047ad3a7edec1b37d1dfdd8259f3bb96 hg38 Primary Tumor C3N-00498-02,C3N-00498-04 -C3N-00511.MethArray.Green.T C3N-00511 PDA Methylation Array tumor CPT0078250006 202184900110_R05C01_Grn.idat 13676256 IDAT Green d6853bca-addf-4e34-9c10-d26289dcc650 0c08ce0c53926f04bd46062f4f9f5701 NA Primary Tumor C3N-00511-03 -C3N-00511.MethArray.Red.T C3N-00511 PDA Methylation Array tumor CPT0078250006 202184900110_R05C01_Red.idat 13676256 IDAT Red fcd2a37b-7f2f-41be-b0b5-d0aebc47f033 33bdd4d67d8ade2dc559cf7b2aff1d05 NA Primary Tumor C3N-00511-03 +C3N-00511.MethArray.Green.T.DEEP_o03BmA C3N-00511 PDA Methylation Array tumor CPT0078250006 202184900110_R05C01_Grn.idat 13676256 IDAT Green d6853bca-addf-4e34-9c10-d26289dcc650 0c08ce0c53926f04bd46062f4f9f5701 NA Primary Tumor C3N-00511-03 deep_sequencing DEEP_o03BmA Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-00511.MethArray.Red.T.DEEP_o03BmA C3N-00511 PDA Methylation Array tumor CPT0078250006 202184900110_R05C01_Red.idat 13676256 IDAT Red fcd2a37b-7f2f-41be-b0b5-d0aebc47f033 33bdd4d67d8ade2dc559cf7b2aff1d05 NA Primary Tumor C3N-00511-03 deep_sequencing DEEP_o03BmA Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00511.miRNA-Seq.T C3N-00511 PDA miRNA-Seq tumor CPT0078250009 181012_UNC32-K00270_0124_AH223CBBXY_GGTAGC_S44_L007_R1_001.unaln.bam 217571620 BAM NA e4bec376-0b91-45a4-91a0-84922554953b 37d3f83ff703ddd66c40b6db4c605da8 NA Primary Tumor C3N-00511-03 C3N-00511.miRNA-Seq.T.hg38 C3N-00511 PDA miRNA-Seq tumor CPT0078250009 88ca37fc-eb00-4de2-ac83-fc2c4a9149fd_mirnaseq_gdc_realn.bam 241752415 BAM NA 29b35319-424f-4568-93aa-84d9384ff37f 9007d4e163f39ed5a7676a221a8d6882 hg38 Primary Tumor C3N-00511-03 C3N-00511.RNA-Seq.chimeric.T.hg38 C3N-00511 PDA RNA-Seq tumor CPT0078250009 055f3a0f-d48e-409d-9e1d-90c26cc6bebc.rna_seq.chimeric.gdc_realn.bam 69546023 BAM chimeric d4e22ea3-783a-4dbf-9737-1340a8a2eab2 b2f639601eb5695c03a57afa2ffc1b31 hg38 Primary Tumor C3N-00511-03 @@ -17851,12 +17863,12 @@ C3N-00511.RNA-Seq.R2.T C3N-00511 PDA RNA-Seq tumor CPT0078250009 170906_UNC32-K0 C3N-00511.RNA-Seq.transcriptome.T.hg38 C3N-00511 PDA RNA-Seq tumor CPT0078250009 055f3a0f-d48e-409d-9e1d-90c26cc6bebc.rna_seq.transcriptome.gdc_realn.bam 8183101035 BAM transcriptome 71fb725e-a6cc-48f8-ac24-d5a3be3d87aa 34186a5ab840e881ef9c35407186d212 hg38 Primary Tumor C3N-00511-03 C3N-00511.WGS.N C3N-00511 PDA WGS blood_normal CPT0078310002 CPT0078310002.WholeGenome.RP-1303.bam 65114654545 BAM NA b956585d-ab87-4cd3-8771-d230d9c4a9e8 b1b8417882a827c8aef44ccd5641664e hg19 Blood Derived Normal C3N-00511-31 C3N-00511.WGS.N.hg38 C3N-00511 PDA WGS blood_normal CPT0078310002 4769f91e-a396-48e9-a979-2ea2ad5b550c_gdc_realn.bam 95883555582 BAM NA 889fd6db-ed7b-4aa8-bc73-baa7ee9db36f 877e7033499e8da2133c820dfc88bd05 hg38 Blood Derived Normal C3N-00511-31 -C3N-00511.WGS.T C3N-00511 PDA WGS tumor CPT0078250006 CPT0078250006.WholeGenome.RP-1303.bam 73611088600 BAM NA a80759e5-1f46-4e3e-a064-4c702257ef3a f0a554d02a0c2745029df3fb52a99e07 hg19 Primary Tumor C3N-00511-03 -C3N-00511.WGS.T.hg38 C3N-00511 PDA WGS tumor CPT0078250006 d1efcc85-6baa-4e76-800d-81badfebf50a_gdc_realn.bam 107916579496 BAM NA 5ea6b3b4-0156-4543-b9cb-fdceec187df6 0d38dc53e806c6c42e50ad4d5f80ac63 hg38 Primary Tumor C3N-00511-03 +C3N-00511.WGS.T.DEEP_o03BmA C3N-00511 PDA WGS tumor CPT0078250006 CPT0078250006.WholeGenome.RP-1303.bam 73611088600 BAM NA a80759e5-1f46-4e3e-a064-4c702257ef3a f0a554d02a0c2745029df3fb52a99e07 hg19 Primary Tumor C3N-00511-03 deep_sequencing DEEP_o03BmA Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-00511.WGS.T.DEEP_o03BmA.hg38 C3N-00511 PDA WGS tumor CPT0078250006 d1efcc85-6baa-4e76-800d-81badfebf50a_gdc_realn.bam 107916579496 BAM NA 5ea6b3b4-0156-4543-b9cb-fdceec187df6 0d38dc53e806c6c42e50ad4d5f80ac63 hg38 Primary Tumor C3N-00511-03 deep_sequencing DEEP_o03BmA Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00511.WXS.N C3N-00511 PDA WXS blood_normal CPT0078310002 CPT0078310002.WholeExome.RP-1303.bam 23878663203 BAM NA f56ab256-bfe4-404a-8706-b6f1f506d848 c8a485eaa90d7230ef4cb6018062450d hg19 Blood Derived Normal C3N-00511-31 C3N-00511.WXS.N.hg38 C3N-00511 PDA WXS blood_normal CPT0078310002 4769f91e-a396-48e9-a979-2ea2ad5b550c_gdc_realn.bam 32313176425 BAM NA f11b65a5-4715-4fc2-979e-17d898de274c c01b39d3ac550262226ee2d8bcfdd355 hg38 Blood Derived Normal C3N-00511-31 -C3N-00511.WXS.T C3N-00511 PDA WXS tumor CPT0078250006 CPT0078250006.WholeExome.RP-1303.bam 30127805460 BAM NA 4d5b010b-21ab-4b5f-b279-0b32070fb1c2 87a42e1ace0251ec10ed290f71357e8f hg19 Primary Tumor C3N-00511-03 -C3N-00511.WXS.T.hg38 C3N-00511 PDA WXS tumor CPT0078250006 d1efcc85-6baa-4e76-800d-81badfebf50a_gdc_realn.bam 41645453083 BAM NA 23eadf0b-0740-49b1-81c9-a63acc6f67d8 7f6b45cfb2bd7d5278e2aaa00bcb75cb hg38 Primary Tumor C3N-00511-03 +C3N-00511.WXS.T.DEEP_o03BmA C3N-00511 PDA WXS tumor CPT0078250006 CPT0078250006.WholeExome.RP-1303.bam 30127805460 BAM NA 4d5b010b-21ab-4b5f-b279-0b32070fb1c2 87a42e1ace0251ec10ed290f71357e8f hg19 Primary Tumor C3N-00511-03 deep_sequencing DEEP_o03BmA Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-00511.WXS.T.DEEP_o03BmA.hg38 C3N-00511 PDA WXS tumor CPT0078250006 d1efcc85-6baa-4e76-800d-81badfebf50a_gdc_realn.bam 41645453083 BAM NA 23eadf0b-0740-49b1-81c9-a63acc6f67d8 7f6b45cfb2bd7d5278e2aaa00bcb75cb hg38 Primary Tumor C3N-00511-03 deep_sequencing DEEP_o03BmA Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00511.WXS.T.hg38.high_cov C3N-00511 PDA WXS tumor CPT0078250006_1 8d21aeea-4893-4c72-ae6f-cc6d35624519_wxs_gdc_realn.bam 77980014328 BAM NA 0f5cf6e2-cb7a-4823-af4a-ecbcdbef768d bc3968265fd004c6c5e236bf897d4c40 hg38 Primary Tumor C3N-00511-03 .high_cov C3N-00511.WXS.T.high_cov C3N-00511 PDA WXS tumor CPT0078250006_1 CPT0078250006_1.WholeExome.RP-1303.bam 56251339959 BAM NA 620a440e-14e3-41f3-b487-ca5691bce30a 1bf1e695ca947fc7c4e026ed6aae59a8 hg19 Primary Tumor C3N-00511-03 .high_cov C3N-00512.MethArray.Green.A C3N-00512 PDA Methylation Array tissue_normal CPT0078180006 203561450048_R05C01_Grn.idat 13676221 IDAT Green 3d2ebfac-8a81-4ac0-b045-64b9c45575d6 c0aa7c36b0e6ba962e91394831005134 NA Solid Tissue Normal C3N-00512-05 @@ -18083,46 +18095,46 @@ C3N-00520.WXS.N.hg38 C3N-00520 UCEC WXS blood_normal CPT0116000002 cafab02f-1ebc C3N-00520.WXS.T C3N-00520 UCEC WXS tumor CPT0115000007 CPT0115000007.WholeExome.RP-1303.bam 26177036245 BAM NA ad48d7c8-3102-4d2c-a2d2-3ade585b7d08 f6286ca9cf009010ceebb0385f37d49e hg19 Primary Tumor C3N-00520-01,C3N-00520-02 C3N-00520.WXS.T.hg38 C3N-00520 UCEC WXS tumor CPT0115000007 77583640-4c16-464b-91a6-64ff04fa1421_wxs_gdc_realn.bam 35601090265 BAM NA 6174bc64-77fb-48be-bd26-51d910ff182e 6cb2e4df8da683c7af5a227e4cdc799a hg38 Primary Tumor C3N-00520-01,C3N-00520-02 C3N-00545.MethArray.Green.A C3N-00545 LUAD Methylation Array tissue_normal CPT0066930008 203027390091_R03C01_Grn.idat 13676226 IDAT Green 9c4ff73b-381b-4beb-bc0a-d04e8475ed25 7d7bda3b700e982fc809ef8ccf073604 NA Solid Tissue Normal C3N-00545-06 -C3N-00545.MethArray.Green.T C3N-00545 LUAD Methylation Array tumor CPT0066910006 203027390078_R02C01_Grn.idat 13676226 IDAT Green d4a5d913-2c3b-443d-b695-34039ceaa4a0 c11ba7c54a3315ef6a8e344d44bb0c5c NA Primary Tumor C3N-00545-03 C3N-00545.MethArray.Green.T.deprecated C3N-00545 LUAD Methylation Array tumor CPT0066890006 202184900140_R06C01_Grn.idat 13676261 IDAT Green 28adc625-622b-45eb-960c-899de7a8a562 e53f4a730203167051e4f2edfe5f119e NA Primary Tumor C3N-00545-01 .deprecated +C3N-00545.MethArray.Green.T.RDNA_omG0EN C3N-00545 LUAD Methylation Array tumor CPT0066910006 203027390078_R02C01_Grn.idat 13676226 IDAT Green d4a5d913-2c3b-443d-b695-34039ceaa4a0 c11ba7c54a3315ef6a8e344d44bb0c5c NA Primary Tumor C3N-00545-03 replacement_DNA RDNA_omG0EN Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-00545.MethArray.Red.A C3N-00545 LUAD Methylation Array tissue_normal CPT0066930008 203027390091_R03C01_Red.idat 13676226 IDAT Red 184617f4-d4b5-4c90-85dc-47465e4b7085 3df42d9d4bd9521fab0d99b404ee2c53 NA Solid Tissue Normal C3N-00545-06 -C3N-00545.MethArray.Red.T C3N-00545 LUAD Methylation Array tumor CPT0066910006 203027390078_R02C01_Red.idat 13676226 IDAT Red 16e8bf55-f2ab-4c7e-aef7-fcd2cc770a34 c9757e0e1899c101f1cbd4252cbbaf4b NA Primary Tumor C3N-00545-03 C3N-00545.MethArray.Red.T.deprecated C3N-00545 LUAD Methylation Array tumor CPT0066890006 202184900140_R06C01_Red.idat 13676261 IDAT Red be802bb5-106a-4330-a223-4d5cca22286f f2531feb98784d11373a5de29c3709f2 NA Primary Tumor C3N-00545-01 .deprecated +C3N-00545.MethArray.Red.T.RDNA_omG0EN C3N-00545 LUAD Methylation Array tumor CPT0066910006 203027390078_R02C01_Red.idat 13676226 IDAT Red 16e8bf55-f2ab-4c7e-aef7-fcd2cc770a34 c9757e0e1899c101f1cbd4252cbbaf4b NA Primary Tumor C3N-00545-03 replacement_DNA RDNA_omG0EN Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-00545.miRNA-Seq.A C3N-00545 LUAD miRNA-Seq tissue_normal CPT0066930005 181108_UNC31-K00269_0162_AH255GBBXY_GGCTAC_S35_L008_R1_001.unaln.bam 340074823 BAM NA 46632a8c-d298-443e-9958-5b7c9b910d38 6733a4cf7dc97c09034c8a85bbdcbec2 NA Solid Tissue Normal C3N-00545-06 C3N-00545.miRNA-Seq.A.hg38 C3N-00545 LUAD miRNA-Seq tissue_normal CPT0066930005 9bee9add-07d8-4c2e-87d5-71e39edbaac4_mirnaseq_gdc_realn.bam 363849933 BAM NA 97df9379-5cc6-4474-9b1a-500daa97c65e bb49eaf168aed6485dc9d56d509e8bd5 hg38 Solid Tissue Normal C3N-00545-06 -C3N-00545.miRNA-Seq.T C3N-00545 LUAD miRNA-Seq tumor CPT0066910009 181113_UNC31-K00269_0164_AH23NNBBXY_CAGGCG_S9_L005_R1_001.unaln.bam 223125879 BAM NA c0690cda-cbfa-4206-826d-9c91903e4802 da2fea56547310536f7825f7b499025f NA Primary Tumor C3N-00545-03 -C3N-00545.miRNA-Seq.T.hg38 C3N-00545 LUAD miRNA-Seq tumor CPT0066910009 c5457d01-f4f0-446a-a62d-a2e5703f3d92_mirnaseq_gdc_realn.bam 245915407 BAM NA e30b037c-51be-4be5-977c-960f65b3c731 f90d1af845af876f26c81cb2bfa2d768 hg38 Primary Tumor C3N-00545-03 +C3N-00545.miRNA-Seq.T.RRNA_rpLvQk C3N-00545 LUAD miRNA-Seq tumor CPT0066910009 181113_UNC31-K00269_0164_AH23NNBBXY_CAGGCG_S9_L005_R1_001.unaln.bam 223125879 BAM NA c0690cda-cbfa-4206-826d-9c91903e4802 da2fea56547310536f7825f7b499025f NA Primary Tumor C3N-00545-03 replacement_RNA RRNA_rpLvQk Duplicate item: Replacement RNA Distribution - original aliquot failed +C3N-00545.miRNA-Seq.T.RRNA_rpLvQk.hg38 C3N-00545 LUAD miRNA-Seq tumor CPT0066910009 c5457d01-f4f0-446a-a62d-a2e5703f3d92_mirnaseq_gdc_realn.bam 245915407 BAM NA e30b037c-51be-4be5-977c-960f65b3c731 f90d1af845af876f26c81cb2bfa2d768 hg38 Primary Tumor C3N-00545-03 replacement_RNA RRNA_rpLvQk Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-00545.RNA-Seq.chimeric.A.hg38 C3N-00545 LUAD RNA-Seq tissue_normal CPT0066930005 a1aa06bc-8d65-41cf-a7fb-e2d413871405.rna_seq.chimeric.gdc_realn.bam 73171172 BAM chimeric d7f32033-ad59-4759-bc9f-34b7f48a6124 318a75094555294bbf2f6b2adf6eda81 hg38 Solid Tissue Normal C3N-00545-06 -C3N-00545.RNA-Seq.chimeric.T.hg38 C3N-00545 LUAD RNA-Seq tumor CPT0066910009 c6758665-5587-4e98-97cd-139d22b31048.rna_seq.chimeric.gdc_realn.bam 27552437 BAM chimeric 32c9432a-4299-4547-a772-476c9afcf1a0 831836523f99ef6f0a2f59028b424684 hg38 Primary Tumor C3N-00545-03 C3N-00545.RNA-Seq.chimeric.T.hg38.deprecated C3N-00545 LUAD RNA-Seq tumor CPT0066890009 2553a2f4-4e4d-4c12-90d6-1a3cc5f05d2a.rna_seq.chimeric.gdc_realn.bam 27223919 BAM chimeric 62283599-ec19-46e6-b259-52a38fd516fe 8d60920b4b7a5a5f7a1628a61a1bee2c hg38 Primary Tumor C3N-00545-01 .deprecated +C3N-00545.RNA-Seq.chimeric.T.RRNA_rpLvQk.hg38 C3N-00545 LUAD RNA-Seq tumor CPT0066910009 c6758665-5587-4e98-97cd-139d22b31048.rna_seq.chimeric.gdc_realn.bam 27552437 BAM chimeric 32c9432a-4299-4547-a772-476c9afcf1a0 831836523f99ef6f0a2f59028b424684 hg38 Primary Tumor C3N-00545-03 replacement_RNA RRNA_rpLvQk Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-00545.RNA-Seq.genomic.A.hg38 C3N-00545 LUAD RNA-Seq tissue_normal CPT0066930005 a1aa06bc-8d65-41cf-a7fb-e2d413871405.rna_seq.genomic.gdc_realn.bam 7241206371 BAM genomic 1f83a85b-24a5-4ab4-a8b9-3ae42f66545d 75105a792cc9a359c2f8bb6b1217b083 hg38 Solid Tissue Normal C3N-00545-06 -C3N-00545.RNA-Seq.genomic.T.hg38 C3N-00545 LUAD RNA-Seq tumor CPT0066910009 c6758665-5587-4e98-97cd-139d22b31048.rna_seq.genomic.gdc_realn.bam 7222940788 BAM genomic 1649b854-643b-4df6-9540-d9ea3c4f7a4e 35409f9f908f8562c47b227c87bbd819 hg38 Primary Tumor C3N-00545-03 C3N-00545.RNA-Seq.genomic.T.hg38.deprecated C3N-00545 LUAD RNA-Seq tumor CPT0066890009 2553a2f4-4e4d-4c12-90d6-1a3cc5f05d2a.rna_seq.genomic.gdc_realn.bam 8838318095 BAM genomic 5cb4b155-7fa9-4af1-930d-1f5c3dc1b494 744bd390bb03baed4e526abf04120292 hg38 Primary Tumor C3N-00545-01 .deprecated +C3N-00545.RNA-Seq.genomic.T.RRNA_rpLvQk.hg38 C3N-00545 LUAD RNA-Seq tumor CPT0066910009 c6758665-5587-4e98-97cd-139d22b31048.rna_seq.genomic.gdc_realn.bam 7222940788 BAM genomic 1649b854-643b-4df6-9540-d9ea3c4f7a4e 35409f9f908f8562c47b227c87bbd819 hg38 Primary Tumor C3N-00545-03 replacement_RNA RRNA_rpLvQk Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-00545.RNA-Seq.R1.A C3N-00545 LUAD RNA-Seq tissue_normal CPT0066930005 171215_UNC32-K00270_0072_AHN3THBBXX_GGCTAC_S4_L001_R1_001.fastq.gz 3481257854 FASTQ NA f8551601-ae62-4c3a-a6f9-54a5b61a7029 ba8c3c736a921eb009e60b63fb83f9a6 NA Solid Tissue Normal C3N-00545-06 -C3N-00545.RNA-Seq.R1.T C3N-00545 LUAD RNA-Seq tumor CPT0066910009 180606_UNC32-K00270_0097_AHVCKFBBXX_GATCAG_S24_L007_R1_001.fastq.gz 3228816890 FASTQ NA 5c4d34ea-977b-4477-84c4-c72a1d817f6a a011f254f1554ce8c8912d163760c3ce NA Primary Tumor C3N-00545-03 C3N-00545.RNA-Seq.R1.T.deprecated C3N-00545 LUAD RNA-Seq tumor CPT0066890009 170828_UNC31-K00269_0077_AHLF33BBXX_GGCTAC_S8_L002_R1_001.fastq.gz 3750262051 FASTQ NA fd3861f3-4713-4c88-a4e4-2f67e02fe102 03182b661ba569883f666b0b13cf9483 NA Primary Tumor C3N-00545-01 .deprecated +C3N-00545.RNA-Seq.R1.T.RRNA_rpLvQk C3N-00545 LUAD RNA-Seq tumor CPT0066910009 180606_UNC32-K00270_0097_AHVCKFBBXX_GATCAG_S24_L007_R1_001.fastq.gz 3228816890 FASTQ NA 5c4d34ea-977b-4477-84c4-c72a1d817f6a a011f254f1554ce8c8912d163760c3ce NA Primary Tumor C3N-00545-03 replacement_RNA RRNA_rpLvQk Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-00545.RNA-Seq.R2.A C3N-00545 LUAD RNA-Seq tissue_normal CPT0066930005 171215_UNC32-K00270_0072_AHN3THBBXX_GGCTAC_S4_L001_R2_001.fastq.gz 4032403866 FASTQ NA 77e85028-53b6-4157-95e0-90d9c9635e21 f79b55652e334c409c16a1eaab1c8e28 NA Solid Tissue Normal C3N-00545-06 -C3N-00545.RNA-Seq.R2.T C3N-00545 LUAD RNA-Seq tumor CPT0066910009 180606_UNC32-K00270_0097_AHVCKFBBXX_GATCAG_S24_L007_R2_001.fastq.gz 3442853503 FASTQ NA a3c1384f-8fc8-4a06-a292-673a478da5e7 4b370165806afe30a15e0a5d156879de NA Primary Tumor C3N-00545-03 C3N-00545.RNA-Seq.R2.T.deprecated C3N-00545 LUAD RNA-Seq tumor CPT0066890009 170828_UNC31-K00269_0077_AHLF33BBXX_GGCTAC_S8_L002_R2_001.fastq.gz 4129280376 FASTQ NA a33cde2f-484a-49df-9cb3-2c0dd9d0f73c d2fce6f71c5026f9edd36fb78f602f48 NA Primary Tumor C3N-00545-01 .deprecated +C3N-00545.RNA-Seq.R2.T.RRNA_rpLvQk C3N-00545 LUAD RNA-Seq tumor CPT0066910009 180606_UNC32-K00270_0097_AHVCKFBBXX_GATCAG_S24_L007_R2_001.fastq.gz 3442853503 FASTQ NA a3c1384f-8fc8-4a06-a292-673a478da5e7 4b370165806afe30a15e0a5d156879de NA Primary Tumor C3N-00545-03 replacement_RNA RRNA_rpLvQk Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-00545.RNA-Seq.transcriptome.A.hg38 C3N-00545 LUAD RNA-Seq tissue_normal CPT0066930005 a1aa06bc-8d65-41cf-a7fb-e2d413871405.rna_seq.transcriptome.gdc_realn.bam 8071816549 BAM transcriptome 140a628b-8379-44a7-933b-5a69132ff5e2 77716743ee3ac553b0e18bfc8bc6b744 hg38 Solid Tissue Normal C3N-00545-06 -C3N-00545.RNA-Seq.transcriptome.T.hg38 C3N-00545 LUAD RNA-Seq tumor CPT0066910009 c6758665-5587-4e98-97cd-139d22b31048.rna_seq.transcriptome.gdc_realn.bam 8300038664 BAM transcriptome faa67dce-078b-4f25-ac5c-75e5f96ced0c af5c308459e2746ed33ca2393567cdb1 hg38 Primary Tumor C3N-00545-03 C3N-00545.RNA-Seq.transcriptome.T.hg38.deprecated C3N-00545 LUAD RNA-Seq tumor CPT0066890009 2553a2f4-4e4d-4c12-90d6-1a3cc5f05d2a.rna_seq.transcriptome.gdc_realn.bam 8982139098 BAM transcriptome 7942613a-c7ef-448e-a62c-994bcf263ea6 e6984d159a5dc4ad79e1e69361e2db12 hg38 Primary Tumor C3N-00545-01 .deprecated +C3N-00545.RNA-Seq.transcriptome.T.RRNA_rpLvQk.hg38 C3N-00545 LUAD RNA-Seq tumor CPT0066910009 c6758665-5587-4e98-97cd-139d22b31048.rna_seq.transcriptome.gdc_realn.bam 8300038664 BAM transcriptome faa67dce-078b-4f25-ac5c-75e5f96ced0c af5c308459e2746ed33ca2393567cdb1 hg38 Primary Tumor C3N-00545-03 replacement_RNA RRNA_rpLvQk Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-00545.WGS.A C3N-00545 LUAD WGS tissue_normal CPT0066930008 CPT0066930008.WholeGenome.RP-1303.bam 54914703437 BAM NA 8a494e7c-b8ee-4066-9feb-60844052a151 2341f57c1ebbbe10ba67217518a3cf66 hg19 Solid Tissue Normal C3N-00545-06 C3N-00545.WGS.A.hg38 C3N-00545 LUAD WGS tissue_normal CPT0066930008 5603a402-13d4-4f67-a990-303a0402b1e4_wgs_gdc_realn.bam 80913083769 BAM NA 769e8e66-a4ee-4bb2-9358-419d71e16dfc c323802d46a985a98b865d1b43081e48 hg38 Solid Tissue Normal C3N-00545-06 C3N-00545.WGS.N C3N-00545 LUAD WGS blood_normal CPT0067010002 CPT0067010002.WholeGenome.RP-1303.bam 87778078950 BAM NA 0366f2dd-89cb-4611-b026-1bc4fa805bcb 46a1348ea813d1ca0fed7fcae7c17596 hg19 Blood Derived Normal C3N-00545-71 C3N-00545.WGS.N.hg38 C3N-00545 LUAD WGS blood_normal CPT0067010002 0ea25eb8-290a-4a16-a5db-b5b4c4be0e32_gdc_realn.bam 137891274230 BAM NA 95404d73-3b20-470a-b1ad-77c1f428b7fb 5bd35933a33427cd6942a3ffac51fcac hg38 Blood Derived Normal C3N-00545-71 -C3N-00545.WGS.T C3N-00545 LUAD WGS tumor CPT0066910006 CPT0066910006.WholeGenome.RP-1303.bam 61178169313 BAM NA 10b76e66-821d-4210-9500-ad805ce01c7b eb832e3707c594f7043992e12007d448 hg19 Primary Tumor C3N-00545-03 C3N-00545.WGS.T.deprecated C3N-00545 LUAD WGS tumor CPT0066890006 CPT0066890006.WholeGenome.RP-1303.bam 68357235084 BAM NA eb45281d-ba05-4621-bf17-28f400e395ca d12a3dd85ac9eed64570e8251a58ef6e hg19 Primary Tumor C3N-00545-01 .deprecated -C3N-00545.WGS.T.hg38 C3N-00545 LUAD WGS tumor CPT0066910006 db37ef3d-5f8d-47c4-9f46-2ecafb8ee37b_wgs_gdc_realn.bam 89133915757 BAM NA d172360d-5cd4-483a-bc9e-ec9306374fc6 921e9df8a3d0580ce13d2ea5156a9ea3 hg38 Primary Tumor C3N-00545-03 C3N-00545.WGS.T.hg38.deprecated C3N-00545 LUAD WGS tumor CPT0066890006 28c2e390-63d5-49fc-8610-b16acd0f824c_gdc_realn.bam 102670797494 BAM NA 0e4539ba-3964-4888-81fe-e67e5b7afd45 70ece26fdbd5f5ead4ab0eb555c1792a hg38 Primary Tumor C3N-00545-01 .deprecated +C3N-00545.WGS.T.RDNA_omG0EN C3N-00545 LUAD WGS tumor CPT0066910006 CPT0066910006.WholeGenome.RP-1303.bam 61178169313 BAM NA 10b76e66-821d-4210-9500-ad805ce01c7b eb832e3707c594f7043992e12007d448 hg19 Primary Tumor C3N-00545-03 replacement_DNA RDNA_omG0EN Duplicate item: Replacement DNA Distribution - original aliquot failed +C3N-00545.WGS.T.RDNA_omG0EN.hg38 C3N-00545 LUAD WGS tumor CPT0066910006 db37ef3d-5f8d-47c4-9f46-2ecafb8ee37b_wgs_gdc_realn.bam 89133915757 BAM NA d172360d-5cd4-483a-bc9e-ec9306374fc6 921e9df8a3d0580ce13d2ea5156a9ea3 hg38 Primary Tumor C3N-00545-03 replacement_DNA RDNA_omG0EN Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-00545.WXS.A C3N-00545 LUAD WXS tissue_normal CPT0066930008 CPT0066930008.WholeExome.RP-1303.bam 36577327908 BAM NA 087c41a1-16b6-4fd6-9acd-bd1619e2ae50 5db3e7862aa5e3397bd5f4800c508d26 hg19 Solid Tissue Normal C3N-00545-06 C3N-00545.WXS.A.hg38 C3N-00545 LUAD WXS tissue_normal CPT0066930008 5603a402-13d4-4f67-a990-303a0402b1e4_wxs_gdc_realn.bam 48830181410 BAM NA 11f89b3c-a6c0-4c0d-80e6-6d2d55064985 74fc78110a9464cd14cf02c0693a0ec7 hg38 Solid Tissue Normal C3N-00545-06 C3N-00545.WXS.N C3N-00545 LUAD WXS blood_normal CPT0067010002 CPT0067010002.WholeExome.RP-1303.bam 24241653466 BAM NA 8817e15e-5a69-4641-8c64-a66af6d3e356 157a82ce1673799e00e6d5d73e29d588 hg19 Blood Derived Normal C3N-00545-71 C3N-00545.WXS.N.hg38 C3N-00545 LUAD WXS blood_normal CPT0067010002 0ea25eb8-290a-4a16-a5db-b5b4c4be0e32_gdc_realn.bam 32774662433 BAM NA 2ac6cf26-7fa7-460f-a31e-3646f7b0f241 5d88238560b3c6b24b94de66e2226ae2 hg38 Blood Derived Normal C3N-00545-71 -C3N-00545.WXS.T C3N-00545 LUAD WXS tumor CPT0066910006 CPT0066910006.WholeExome.RP-1303.bam 41051144434 BAM NA a3d38eee-803f-4ef7-b9a5-12313467a136 654fa7b05cc3ba9140c45a030a395e7e hg19 Primary Tumor C3N-00545-03 C3N-00545.WXS.T.deprecated C3N-00545 LUAD WXS tumor CPT0066890006 CPT0066890006.WholeExome.RP-1303.bam 24089106965 BAM NA 8f74b67f-e3e8-4f21-8fa3-88012ca240c0 2c41055ff8cc831c4bb6c6e55900719a hg19 Primary Tumor C3N-00545-01 .deprecated -C3N-00545.WXS.T.hg38 C3N-00545 LUAD WXS tumor CPT0066910006 db37ef3d-5f8d-47c4-9f46-2ecafb8ee37b_wxs_gdc_realn.bam 56785034773 BAM NA 0336e36c-8b35-4d98-a5d8-087891d1e750 98f8253453f5b0d42de3eb526f0b5eec hg38 Primary Tumor C3N-00545-03 C3N-00545.WXS.T.hg38.deprecated C3N-00545 LUAD WXS tumor CPT0066890006 28c2e390-63d5-49fc-8610-b16acd0f824c_gdc_realn.bam 33979983169 BAM NA b594ed24-335e-44ba-8f8c-e317b5f85814 31af578174eed3dc28ed55a515e7cc4a hg38 Primary Tumor C3N-00545-01 .deprecated +C3N-00545.WXS.T.RDNA_omG0EN C3N-00545 LUAD WXS tumor CPT0066910006 CPT0066910006.WholeExome.RP-1303.bam 41051144434 BAM NA a3d38eee-803f-4ef7-b9a5-12313467a136 654fa7b05cc3ba9140c45a030a395e7e hg19 Primary Tumor C3N-00545-03 replacement_DNA RDNA_omG0EN Duplicate item: Replacement DNA Distribution - original aliquot failed +C3N-00545.WXS.T.RDNA_omG0EN.hg38 C3N-00545 LUAD WXS tumor CPT0066910006 db37ef3d-5f8d-47c4-9f46-2ecafb8ee37b_wxs_gdc_realn.bam 56785034773 BAM NA 0336e36c-8b35-4d98-a5d8-087891d1e750 98f8253453f5b0d42de3eb526f0b5eec hg38 Primary Tumor C3N-00545-03 replacement_DNA RDNA_omG0EN Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-00546.MethArray.Green.A C3N-00546 LUAD Methylation Array tissue_normal CPT0067110009 203027390034_R05C01_Grn.idat 13676226 IDAT Green a3d97d6d-d189-464f-bff9-e0ebdaccc35d a29f8cecc567030e2d2b847122d36b83 NA Solid Tissue Normal C3N-00546-06 C3N-00546.MethArray.Green.T C3N-00546 LUAD Methylation Array tumor CPT0067070006 202184900105_R05C01_Grn.idat 13676223 IDAT Green 72ac824e-fcb0-4f7c-a16a-7c2c9f5f47b3 6cdf0001fb7382ab968d2e3ae04a7532 NA Primary Tumor C3N-00546-01 C3N-00546.MethArray.Red.A C3N-00546 LUAD Methylation Array tissue_normal CPT0067110009 203027390034_R05C01_Red.idat 13676226 IDAT Red b4424c55-7db1-42de-a2b9-d8d9c39162c0 b8aea211e398b963f8a5a8da17e2f83f NA Solid Tissue Normal C3N-00546-06 @@ -19829,9 +19841,9 @@ C3N-00954.WXS.T.hg38.deprecated C3N-00954 PDA WXS tumor CPT0065080013 624dfe3b-a C3N-00954.WXS.T.hg38.high_cov C3N-00954 PDA WXS tumor CPT0065080013_1 eb3df28f-f452-47fa-8b1a-290e0fdd24b4_wxs_gdc_realn.bam 75506601837 BAM NA 47b92164-64e3-479d-83f5-4678d6bdd3fb 33e9dbceb9ea8f4f52fed839bf0e2c6d hg38 Primary Tumor C3N-00954-02 .high_cov C3N-00954.WXS.T.high_cov C3N-00954 PDA WXS tumor CPT0065080013_1 CPT0065080013_1.WholeExome.RP-1303.bam 54955919027 BAM NA 8cbc1a02-ab24-4933-9873-f24956cff99c c92450cc944d814c337013b226d8ee92 hg19 Primary Tumor C3N-00954-02 .high_cov C3N-00957.MethArray.Green.A C3N-00957 PDA Methylation Array tissue_normal CPT0089750007 203561620053_R08C01_Grn.idat 13676211 IDAT Green a77e3b38-37bd-4c62-8ea1-ceb5923dd152 472e876682681f358fdd383e0080c994 NA Solid Tissue Normal C3N-00957-06,C3N-00957-07 -C3N-00957.MethArray.Green.T C3N-00957 PDA Methylation Array tumor CPT0089720009 202234360029_R03C01_Grn.idat 13676226 IDAT Green 84bcdede-25a8-450e-9067-29f65d95c4ee bf7773074dfad9eeb5484fb1f673f4d0 NA Primary Tumor C3N-00957-01 +C3N-00957.MethArray.Green.T.DEEP_roKgy2 C3N-00957 PDA Methylation Array tumor CPT0089720009 202234360029_R03C01_Grn.idat 13676226 IDAT Green 84bcdede-25a8-450e-9067-29f65d95c4ee bf7773074dfad9eeb5484fb1f673f4d0 NA Primary Tumor C3N-00957-01 deep_sequencing DEEP_roKgy2 Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00957.MethArray.Red.A C3N-00957 PDA Methylation Array tissue_normal CPT0089750007 203561620053_R08C01_Red.idat 13676211 IDAT Red 5546d99a-5c9e-48c9-abc7-e94e2ce42e59 10608d4cb7290c3ce20549d16cadd650 NA Solid Tissue Normal C3N-00957-06,C3N-00957-07 -C3N-00957.MethArray.Red.T C3N-00957 PDA Methylation Array tumor CPT0089720009 202234360029_R03C01_Red.idat 13676226 IDAT Red e5a6177f-5cfc-43e5-8f97-31d95493bba0 dcdff9cca8cbce7e224ae1be720ad02a NA Primary Tumor C3N-00957-01 +C3N-00957.MethArray.Red.T.DEEP_roKgy2 C3N-00957 PDA Methylation Array tumor CPT0089720009 202234360029_R03C01_Red.idat 13676226 IDAT Red e5a6177f-5cfc-43e5-8f97-31d95493bba0 dcdff9cca8cbce7e224ae1be720ad02a NA Primary Tumor C3N-00957-01 deep_sequencing DEEP_roKgy2 Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00957.miRNA-Seq.T C3N-00957 PDA miRNA-Seq tumor CPT0089720006 180724_UNC32-K00270_0106_BHWK3MBBXX_CAACTA_S5_L007_R1_001.unaln.bam 264781864 BAM NA 998c8a92-92c9-4656-9368-30f7752bdc7c 97573249e020dec33843dbdfbe57a161 NA Primary Tumor C3N-00957-01 C3N-00957.miRNA-Seq.T.hg38 C3N-00957 PDA miRNA-Seq tumor CPT0089720006 94568398-b852-4380-b8d2-5be89c73b351_mirnaseq_gdc_realn.bam 285819047 BAM NA d83bf88a-b4f3-4e27-987c-ad38affb09ad 1dbe84040a571e631690fcba12001553 hg38 Primary Tumor C3N-00957-01 C3N-00957.RNA-Seq.chimeric.T.hg38 C3N-00957 PDA RNA-Seq tumor CPT0089720006 aac0b238-0c48-4a76-98fb-48af7cf0546d.rna_seq.chimeric.gdc_realn.bam 38446187 BAM chimeric f791bca1-d0e6-4f47-8843-a25368cdf48e 8d3aa5aa07d4c1905374de2f36287a89 hg38 Primary Tumor C3N-00957-01 @@ -19843,14 +19855,14 @@ C3N-00957.WGS.A C3N-00957 PDA WGS tissue_normal CPT0089750007 CPT0089750007.Whol C3N-00957.WGS.A.hg38 C3N-00957 PDA WGS tissue_normal CPT0089750007 64db149d-cd1f-43a2-bcdc-1765ac672776_wgs_gdc_realn.bam 82332167189 BAM NA dc59cd3e-6b2f-4427-a800-bb0ce2129f01 de098e7769517c67457149b1afc4374d hg38 Solid Tissue Normal C3N-00957-06,C3N-00957-07 C3N-00957.WGS.N C3N-00957 PDA WGS blood_normal CPT0091380002 CPT0091380002.WholeGenome.RP-1303.bam 59032000458 BAM NA 0b1769a1-e60a-4d07-ab34-e5490f59e65f db2c8e7704c53f8b456fdd73595a7e18 hg19 Blood Derived Normal C3N-00957-31 C3N-00957.WGS.N.hg38 C3N-00957 PDA WGS blood_normal CPT0091380002 e57bbda9-d5ab-49b3-a731-7b3050424f62_wgs_gdc_realn.bam 87688384544 BAM NA 77936b8e-3991-4d6c-b393-266344ba2fc9 4b015a0a1f4d910b06ae88b5f1b5b2dc hg38 Blood Derived Normal C3N-00957-31 -C3N-00957.WGS.T C3N-00957 PDA WGS tumor CPT0089720009 CPT0089720009.WholeGenome.RP-1303.bam 58231483153 BAM NA c52ca1e6-4a57-4225-8803-3c6bb70fd9c9 4f20b8da86dbf95f8a8730671203c6de hg19 Primary Tumor C3N-00957-01 -C3N-00957.WGS.T.hg38 C3N-00957 PDA WGS tumor CPT0089720009 09adfee1-caef-414c-b95a-68ed0ce391a8_wgs_gdc_realn.bam 85329545588 BAM NA 9c4d41ba-8a18-4928-b100-893b1858dbd9 1f908d02518f681349b2251c32d93400 hg38 Primary Tumor C3N-00957-01 +C3N-00957.WGS.T.DEEP_roKgy2 C3N-00957 PDA WGS tumor CPT0089720009 CPT0089720009.WholeGenome.RP-1303.bam 58231483153 BAM NA c52ca1e6-4a57-4225-8803-3c6bb70fd9c9 4f20b8da86dbf95f8a8730671203c6de hg19 Primary Tumor C3N-00957-01 deep_sequencing DEEP_roKgy2 Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-00957.WGS.T.DEEP_roKgy2.hg38 C3N-00957 PDA WGS tumor CPT0089720009 09adfee1-caef-414c-b95a-68ed0ce391a8_wgs_gdc_realn.bam 85329545588 BAM NA 9c4d41ba-8a18-4928-b100-893b1858dbd9 1f908d02518f681349b2251c32d93400 hg38 Primary Tumor C3N-00957-01 deep_sequencing DEEP_roKgy2 Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00957.WXS.A C3N-00957 PDA WXS tissue_normal CPT0089750007 CPT0089750007.WholeExome.RP-1303.bam 26521160811 BAM NA d98c509c-a180-460f-9975-2d329ab05d09 47ec4972f7dd41dc5057f85826cb74a6 hg19 Solid Tissue Normal C3N-00957-06,C3N-00957-07 C3N-00957.WXS.A.hg38 C3N-00957 PDA WXS tissue_normal CPT0089750007 64db149d-cd1f-43a2-bcdc-1765ac672776_wxs_gdc_realn.bam 35960050006 BAM NA c12e493e-52c3-4ea4-931f-cd736bbef506 c27d63409f00faf35616f8efb46b8e01 hg38 Solid Tissue Normal C3N-00957-06,C3N-00957-07 C3N-00957.WXS.N C3N-00957 PDA WXS blood_normal CPT0091380002 CPT0091380002.WholeExome.RP-1303.bam 39068976605 BAM NA 75fd5e68-0512-4ed4-b7c4-01511f755f35 a677f5dcbbf5281b87639044bfd3da7c hg19 Blood Derived Normal C3N-00957-31 C3N-00957.WXS.N.hg38 C3N-00957 PDA WXS blood_normal CPT0091380002 e57bbda9-d5ab-49b3-a731-7b3050424f62_wxs_gdc_realn.bam 53899006822 BAM NA aa13a00e-9297-410e-af11-4695f7753c31 9ee4a6f793dad3e0686fca77a8f18abe hg38 Blood Derived Normal C3N-00957-31 -C3N-00957.WXS.T C3N-00957 PDA WXS tumor CPT0089720009 CPT0089720009.WholeExome.RP-1303.bam 33457437771 BAM NA 2a773ca9-0cf1-48ab-833c-22779f2a26b9 c2591fedaead142f31b34447539e2cb1 hg19 Primary Tumor C3N-00957-01 -C3N-00957.WXS.T.hg38 C3N-00957 PDA WXS tumor CPT0089720009 09adfee1-caef-414c-b95a-68ed0ce391a8_wxs_gdc_realn.bam 45791099037 BAM NA 693cdc51-ab9c-4b7e-988b-39c94028c251 ac7ff412bcda32731827496dedac0720 hg38 Primary Tumor C3N-00957-01 +C3N-00957.WXS.T.DEEP_roKgy2 C3N-00957 PDA WXS tumor CPT0089720009 CPT0089720009.WholeExome.RP-1303.bam 33457437771 BAM NA 2a773ca9-0cf1-48ab-833c-22779f2a26b9 c2591fedaead142f31b34447539e2cb1 hg19 Primary Tumor C3N-00957-01 deep_sequencing DEEP_roKgy2 Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-00957.WXS.T.DEEP_roKgy2.hg38 C3N-00957 PDA WXS tumor CPT0089720009 09adfee1-caef-414c-b95a-68ed0ce391a8_wxs_gdc_realn.bam 45791099037 BAM NA 693cdc51-ab9c-4b7e-988b-39c94028c251 ac7ff412bcda32731827496dedac0720 hg38 Primary Tumor C3N-00957-01 deep_sequencing DEEP_roKgy2 Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00957.WXS.T.hg38.high_cov C3N-00957 PDA WXS tumor CPT0089720009_1 35d8f6b0-b20d-4676-bb76-9416d7a5bd11_wxs_gdc_realn.bam 78682798708 BAM NA 4d3af9f7-b24b-40fd-8471-5d5e4270d98b 67e32bcbdda3e4cb66aa1602c4185f61 hg38 Primary Tumor C3N-00957-01 .high_cov C3N-00957.WXS.T.high_cov C3N-00957 PDA WXS tumor CPT0089720009_1 CPT0089720009_1.WholeExome.RP-1303.bam 57261185706 BAM NA 22b06158-8c7d-461a-ac42-4b22e48b4f09 97e4466170795b16c2da2de5243146f0 hg19 Primary Tumor C3N-00957-01 .high_cov C3N-00959.MethArray.Green.A C3N-00959 LUAD Methylation Array tissue_normal CPT0079850008 203028200048_R06C01_Grn.idat 13676232 IDAT Green c0d59ff5-47b7-4a29-bad9-0210a099ddb5 d67473439d5cc3221bfaa38462300a4e NA Solid Tissue Normal C3N-00959-06 @@ -20754,8 +20766,8 @@ C3N-01091.WXS.N C3N-01091 CCRCC WXS blood_normal CPT0213020002 CPT0213020002.Who C3N-01091.WXS.N.hg38 C3N-01091 CCRCC WXS blood_normal CPT0213020002 6518fe48-b295-4778-b70b-c6f99d995c4b_wxs_gdc_realn.bam 30613973545 BAM NA 220e8d09-4d3b-4820-8c0a-b4fe60c916d7 d8dd9277a466f3f4c42cfa25a5773ef2 hg38 Blood Derived Normal C3N-01091-71 C3N-01091.WXS.T C3N-01091 CCRCC WXS tumor CPT0212920006 CPT0212920006.WholeExome.RP-1303.bam 25487812596 BAM NA 9da52ea1-7f3d-4af7-96ba-a4a98db5e878 06484678cff6e1fb3e4c8e4e31d7fcda hg19 Primary Tumor C3N-01091-03 C3N-01091.WXS.T.hg38 C3N-01091 CCRCC WXS tumor CPT0212920006 96449553-34c8-473b-a922-82a83ea0ee54_wxs_gdc_realn.bam 35284249131 BAM NA ef8fa604-2ee9-46ce-a011-e6eb1a40d997 74346bfceebc77f95d94b994d189d2e3 hg38 Primary Tumor C3N-01091-03 -C3N-01165.MethArray.Green.T C3N-01165 PDA Methylation Array tumor CPT0093930010 202234360029_R05C01_Grn.idat 13676241 IDAT Green f2c1a165-e527-4581-9e9e-4fac1b9c76ac 7aa99c9c59edd31264324a552d8aad40 NA Primary Tumor C3N-01165-02,C3N-01165-03 -C3N-01165.MethArray.Red.T C3N-01165 PDA Methylation Array tumor CPT0093930010 202234360029_R05C01_Red.idat 13676241 IDAT Red 928411ca-b73b-4962-8cf1-a2ee2bacf803 710a0772cc5967f156fcb30c0cec3814 NA Primary Tumor C3N-01165-02,C3N-01165-03 +C3N-01165.MethArray.Green.T.DEEP_v6g4pX C3N-01165 PDA Methylation Array tumor CPT0093930010 202234360029_R05C01_Grn.idat 13676241 IDAT Green f2c1a165-e527-4581-9e9e-4fac1b9c76ac 7aa99c9c59edd31264324a552d8aad40 NA Primary Tumor C3N-01165-02,C3N-01165-03 deep_sequencing DEEP_v6g4pX Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01165.MethArray.Red.T.DEEP_v6g4pX C3N-01165 PDA Methylation Array tumor CPT0093930010 202234360029_R05C01_Red.idat 13676241 IDAT Red 928411ca-b73b-4962-8cf1-a2ee2bacf803 710a0772cc5967f156fcb30c0cec3814 NA Primary Tumor C3N-01165-02,C3N-01165-03 deep_sequencing DEEP_v6g4pX Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01165.miRNA-Seq.T C3N-01165 PDA miRNA-Seq tumor CPT0093930007 180828_UNC32-K00270_0112_AHWTLNBBXX_CATGGC_S40_L007_R1_001.unaln.bam 231459983 BAM NA a4bb9742-712a-4628-81e6-e173bf2471d3 8fb811fd4d4e6cd12b42e374385d2573 NA Primary Tumor C3N-01165-02,C3N-01165-03 C3N-01165.miRNA-Seq.T.hg38 C3N-01165 PDA miRNA-Seq tumor CPT0093930007 fde92faa-7c74-4f79-bac9-6be631daf1e1_mirnaseq_gdc_realn.bam 261501289 BAM NA 474a0f30-7263-4cb6-9680-de3314ef21f0 43f5fe6f0687cbebc9b2af55b4ae059d hg38 Primary Tumor C3N-01165-02,C3N-01165-03 C3N-01165.RNA-Seq.chimeric.T.hg38 C3N-01165 PDA RNA-Seq tumor CPT0093930007 242a2ff6-a9c7-4bfb-9316-0214c015c015.rna_seq.chimeric.gdc_realn.bam 34058541 BAM chimeric ca461b13-686d-45ec-8681-62600637cba3 86e4c38cf45dde744b53529c25d35447 hg38 Primary Tumor C3N-01165-02,C3N-01165-03 @@ -20765,16 +20777,16 @@ C3N-01165.RNA-Seq.R2.T C3N-01165 PDA RNA-Seq tumor CPT0093930007 171129_UNC32-K0 C3N-01165.RNA-Seq.transcriptome.T.hg38 C3N-01165 PDA RNA-Seq tumor CPT0093930007 242a2ff6-a9c7-4bfb-9316-0214c015c015.rna_seq.transcriptome.gdc_realn.bam 10473085884 BAM transcriptome 85c1c77e-c264-4832-a8fb-cface246a665 ec93f742fe8aa8b14f0d1f47134fc4f3 hg38 Primary Tumor C3N-01165-02,C3N-01165-03 C3N-01165.WGS.N C3N-01165 PDA WGS blood_normal CPT0093970002 CPT0093970002.WholeGenome.RP-1303.bam 56928720368 BAM NA 92d04e5a-5d89-4d3b-ba8f-220208a003ca 904b23428300ff91381ac4a12e56839d hg19 Blood Derived Normal C3N-01165-31 C3N-01165.WGS.N.hg38 C3N-01165 PDA WGS blood_normal CPT0093970002 1e3bbe99-f650-4ccf-ae6c-b3808b778c5e_wgs_gdc_realn.bam 84357331846 BAM NA f38c4d33-0ba9-47bd-be74-6ea2ab3aba11 ca6a4f53b13ec4ab38f88ec9d203e96d hg38 Blood Derived Normal C3N-01165-31 -C3N-01165.WGS.T C3N-01165 PDA WGS tumor CPT0093930010 CPT0093930010.WholeGenome.RP-1303.bam 122850949726 BAM NA 19890ca7-b5c6-4a52-9734-d374aff284e5 523858c22d5b878c575abac5b1f58003 hg19 Primary Tumor C3N-01165-02,C3N-01165-03 -C3N-01165.WGS.T.hg38 C3N-01165 PDA WGS tumor CPT0093930010 2272a222-c5c0-407b-858c-83cf60566517_wgs_gdc_realn.bam 182069914786 BAM NA 69f86aa0-f83f-4969-9e07-86e0de73f22f 40ebf8ca87d2ee40734b3467b96cb91a hg38 Primary Tumor C3N-01165-02,C3N-01165-03 +C3N-01165.WGS.T.DEEP_v6g4pX C3N-01165 PDA WGS tumor CPT0093930010 CPT0093930010.WholeGenome.RP-1303.bam 122850949726 BAM NA 19890ca7-b5c6-4a52-9734-d374aff284e5 523858c22d5b878c575abac5b1f58003 hg19 Primary Tumor C3N-01165-02,C3N-01165-03 deep_sequencing DEEP_v6g4pX Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01165.WGS.T.DEEP_v6g4pX.hg38 C3N-01165 PDA WGS tumor CPT0093930010 2272a222-c5c0-407b-858c-83cf60566517_wgs_gdc_realn.bam 182069914786 BAM NA 69f86aa0-f83f-4969-9e07-86e0de73f22f 40ebf8ca87d2ee40734b3467b96cb91a hg38 Primary Tumor C3N-01165-02,C3N-01165-03 deep_sequencing DEEP_v6g4pX Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01165.WXS.N C3N-01165 PDA WXS blood_normal CPT0093970002 CPT0093970002.WholeExome.RP-1303.bam 35264162772 BAM NA 799eeb65-822a-48e0-8a2d-0d8dc7ce8241 b544a05913e8f72f54473568fe410fef hg19 Blood Derived Normal C3N-01165-31 C3N-01165.WXS.N.hg38 C3N-01165 PDA WXS blood_normal CPT0093970002 1e3bbe99-f650-4ccf-ae6c-b3808b778c5e_wxs_gdc_realn.bam 48542251994 BAM NA c5233abe-7b5c-4316-8002-4f8ba08970ec 00e13a6feac18ec5b35e3e2efe6b4671 hg38 Blood Derived Normal C3N-01165-31 -C3N-01165.WXS.T C3N-01165 PDA WXS tumor CPT0093930010 CPT0093930010.WholeExome.RP-1303.bam 31855767492 BAM NA feb6a01d-bf59-4708-8992-bf8477de3413 dba6fc33334c41f9326ffe7379f3ab2c hg19 Primary Tumor C3N-01165-02,C3N-01165-03 -C3N-01165.WXS.T.hg38 C3N-01165 PDA WXS tumor CPT0093930010 2272a222-c5c0-407b-858c-83cf60566517_wxs_gdc_realn.bam 44151910887 BAM NA 5ab73544-ffac-4cc9-9d93-66f7fda0ad56 0580c3b4e219fc4e3695b5fceb43cff7 hg38 Primary Tumor C3N-01165-02,C3N-01165-03 +C3N-01165.WXS.T.DEEP_v6g4pX C3N-01165 PDA WXS tumor CPT0093930010 CPT0093930010.WholeExome.RP-1303.bam 31855767492 BAM NA feb6a01d-bf59-4708-8992-bf8477de3413 dba6fc33334c41f9326ffe7379f3ab2c hg19 Primary Tumor C3N-01165-02,C3N-01165-03 deep_sequencing DEEP_v6g4pX Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01165.WXS.T.DEEP_v6g4pX.hg38 C3N-01165 PDA WXS tumor CPT0093930010 2272a222-c5c0-407b-858c-83cf60566517_wxs_gdc_realn.bam 44151910887 BAM NA 5ab73544-ffac-4cc9-9d93-66f7fda0ad56 0580c3b4e219fc4e3695b5fceb43cff7 hg38 Primary Tumor C3N-01165-02,C3N-01165-03 deep_sequencing DEEP_v6g4pX Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01165.WXS.T.hg38.high_cov C3N-01165 PDA WXS tumor CPT0093930010_1 6909d633-6f16-4a7d-8c32-e336c7aac09c_wxs_gdc_realn.bam 86614024711 BAM NA 8cf32f57-6699-4906-8bdb-7f03c822a787 a2e7ee4dee4c523c4d0334dfacddfec8 hg38 Primary Tumor C3N-01165-03 .high_cov C3N-01165.WXS.T.high_cov C3N-01165 PDA WXS tumor CPT0093930010_1 CPT0093930010_1.WholeExome.RP-1303.bam 62910727021 BAM NA 6e14723e-a366-40a6-96a9-a76b4a350682 3cd3d4fade6ad51083c01a71ec4f9597 hg19 Primary Tumor C3N-01165-03 .high_cov -C3N-01166.MethArray.Green.T C3N-01166 PDA Methylation Array tumor CPT0093980010 202234380102_R06C01_Grn.idat 13676231 IDAT Green b0a49f82-f8bf-45f8-859f-9fadc75f33f6 71c5a4e1007ce06d77be08aec719b8e5 NA Primary Tumor C3N-01166-01,C3N-01166-02 -C3N-01166.MethArray.Red.T C3N-01166 PDA Methylation Array tumor CPT0093980010 202234380102_R06C01_Red.idat 13676231 IDAT Red 059c3e26-1f5c-4560-bfff-b5d925f18b24 f01c295b8aed46e9d1f81662186ed209 NA Primary Tumor C3N-01166-01,C3N-01166-02 +C3N-01166.MethArray.Green.T.DEEP_v6o9wL C3N-01166 PDA Methylation Array tumor CPT0093980010 202234380102_R06C01_Grn.idat 13676231 IDAT Green b0a49f82-f8bf-45f8-859f-9fadc75f33f6 71c5a4e1007ce06d77be08aec719b8e5 NA Primary Tumor C3N-01166-01,C3N-01166-02 deep_sequencing DEEP_v6o9wL Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01166.MethArray.Red.T.DEEP_v6o9wL C3N-01166 PDA Methylation Array tumor CPT0093980010 202234380102_R06C01_Red.idat 13676231 IDAT Red 059c3e26-1f5c-4560-bfff-b5d925f18b24 f01c295b8aed46e9d1f81662186ed209 NA Primary Tumor C3N-01166-01,C3N-01166-02 deep_sequencing DEEP_v6o9wL Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01166.miRNA-Seq.T C3N-01166 PDA miRNA-Seq tumor CPT0093980007 180828_UNC32-K00270_0112_AHWTLNBBXX_CATTTT_S41_L007_R1_001.unaln.bam 336784270 BAM NA 06d02bbf-4870-4568-9259-f3532a60c915 e0dc3915d851051570e53f44b52b2fb7 NA Primary Tumor C3N-01166-01,C3N-01166-02 C3N-01166.miRNA-Seq.T.hg38 C3N-01166 PDA miRNA-Seq tumor CPT0093980007 76121067-2dd1-422a-8d73-0d105a85f876_mirnaseq_gdc_realn.bam 377267757 BAM NA 6d353ee8-6aa0-4d13-a24b-7837c0038efb 6a554dc89af03e0ee963bc184a9852d4 hg38 Primary Tumor C3N-01166-01,C3N-01166-02 C3N-01166.RNA-Seq.chimeric.T.hg38 C3N-01166 PDA RNA-Seq tumor CPT0093980007 68b98d5a-3f6a-473b-9aed-8b1219e416dc.rna_seq.chimeric.gdc_realn.bam 37582355 BAM chimeric a9abf8e7-4dae-45a3-857b-b1f7c68ca426 89ff9b939454dc49458ab5e9f47b3821 hg38 Primary Tumor C3N-01166-01,C3N-01166-02 @@ -20784,16 +20796,16 @@ C3N-01166.RNA-Seq.R2.T C3N-01166 PDA RNA-Seq tumor CPT0093980007 171129_UNC32-K0 C3N-01166.RNA-Seq.transcriptome.T.hg38 C3N-01166 PDA RNA-Seq tumor CPT0093980007 68b98d5a-3f6a-473b-9aed-8b1219e416dc.rna_seq.transcriptome.gdc_realn.bam 10538566106 BAM transcriptome 7a6fa9fb-ae13-4eda-b228-561a09c3fa8c 57a9b9e72d137e35448e098507f0384e hg38 Primary Tumor C3N-01166-01,C3N-01166-02 C3N-01166.WGS.N C3N-01166 PDA WGS blood_normal CPT0094020002 CPT0094020002.WholeGenome.RP-1303.bam 56277336639 BAM NA dfbf4470-dc54-48fd-a456-f4cc7ec5f380 d25146717677ed156183b4927136d42e hg19 Blood Derived Normal C3N-01166-31 C3N-01166.WGS.N.hg38 C3N-01166 PDA WGS blood_normal CPT0094020002 5f0475ea-0fad-44a4-a58b-24fe7c42a5db_wgs_gdc_realn.bam 82827610347 BAM NA d39d185f-cf9e-45b1-9554-23ad6aafbefa 0129d9db39e64780f4282420825e2c29 hg38 Blood Derived Normal C3N-01166-31 -C3N-01166.WGS.T C3N-01166 PDA WGS tumor CPT0093980010 CPT0093980010.WholeGenome.RP-1303.bam 73487719487 BAM NA 98001c38-0d9e-4ddb-88f8-404984440f7f e72da37a5c6a8c15b74643a7676efe0e hg19 Primary Tumor C3N-01166-01,C3N-01166-02 -C3N-01166.WGS.T.hg38 C3N-01166 PDA WGS tumor CPT0093980010 704b9b95-74af-455e-95f0-b130abeb8c47_wgs_gdc_realn.bam 109576339140 BAM NA fbd5becd-2394-4f66-b183-437504add9ac 1333b76c10b6b461b3ddfc214ef9ab9c hg38 Primary Tumor C3N-01166-01,C3N-01166-02 +C3N-01166.WGS.T.DEEP_v6o9wL C3N-01166 PDA WGS tumor CPT0093980010 CPT0093980010.WholeGenome.RP-1303.bam 73487719487 BAM NA 98001c38-0d9e-4ddb-88f8-404984440f7f e72da37a5c6a8c15b74643a7676efe0e hg19 Primary Tumor C3N-01166-01,C3N-01166-02 deep_sequencing DEEP_v6o9wL Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01166.WGS.T.DEEP_v6o9wL.hg38 C3N-01166 PDA WGS tumor CPT0093980010 704b9b95-74af-455e-95f0-b130abeb8c47_wgs_gdc_realn.bam 109576339140 BAM NA fbd5becd-2394-4f66-b183-437504add9ac 1333b76c10b6b461b3ddfc214ef9ab9c hg38 Primary Tumor C3N-01166-01,C3N-01166-02 deep_sequencing DEEP_v6o9wL Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01166.WXS.N C3N-01166 PDA WXS blood_normal CPT0094020002 CPT0094020002.WholeExome.RP-1303.bam 32894976633 BAM NA 6ea50057-db7f-4933-a81a-4b0a1316d037 23555ff9fd75ce3fc3f626ecf80eb1ed hg19 Blood Derived Normal C3N-01166-31 C3N-01166.WXS.N.hg38 C3N-01166 PDA WXS blood_normal CPT0094020002 5f0475ea-0fad-44a4-a58b-24fe7c42a5db_wxs_gdc_realn.bam 45184969148 BAM NA 2b850ddd-a757-4ecd-9d62-ac9edefe81f6 0cbe5c2bb3788068c79a0c1723cb8148 hg38 Blood Derived Normal C3N-01166-31 -C3N-01166.WXS.T C3N-01166 PDA WXS tumor CPT0093980010 CPT0093980010.WholeExome.RP-1303.bam 34518854583 BAM NA 4132766a-ff1a-47a4-9950-be625d8713ef 623ef29609476580f4277b384876f928 hg19 Primary Tumor C3N-01166-01,C3N-01166-02 -C3N-01166.WXS.T.hg38 C3N-01166 PDA WXS tumor CPT0093980010 704b9b95-74af-455e-95f0-b130abeb8c47_wxs_gdc_realn.bam 47899887506 BAM NA de84baa2-f473-49f5-a328-d26f95f19508 80b3fe153c59db000bd98a05040b3d64 hg38 Primary Tumor C3N-01166-01,C3N-01166-02 +C3N-01166.WXS.T.DEEP_v6o9wL C3N-01166 PDA WXS tumor CPT0093980010 CPT0093980010.WholeExome.RP-1303.bam 34518854583 BAM NA 4132766a-ff1a-47a4-9950-be625d8713ef 623ef29609476580f4277b384876f928 hg19 Primary Tumor C3N-01166-01,C3N-01166-02 deep_sequencing DEEP_v6o9wL Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01166.WXS.T.DEEP_v6o9wL.hg38 C3N-01166 PDA WXS tumor CPT0093980010 704b9b95-74af-455e-95f0-b130abeb8c47_wxs_gdc_realn.bam 47899887506 BAM NA de84baa2-f473-49f5-a328-d26f95f19508 80b3fe153c59db000bd98a05040b3d64 hg38 Primary Tumor C3N-01166-01,C3N-01166-02 deep_sequencing DEEP_v6o9wL Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01166.WXS.T.hg38.high_cov C3N-01166 PDA WXS tumor CPT0093980010_1 061cfc9d-8a34-4f3a-a9e8-c5d5720a4e35_wxs_gdc_realn.bam 83359073550 BAM NA f8221c13-80fb-413a-976e-4efaaf8c419b da4a42ca30cc9076d6a2d5e4ff06d306 hg38 Primary Tumor C3N-01166-02 .high_cov C3N-01166.WXS.T.high_cov C3N-01166 PDA WXS tumor CPT0093980010_1 CPT0093980010_1.WholeExome.RP-1303.bam 60509097929 BAM NA dd59f417-041e-4dea-ba89-d1b8d3f1e427 7178af8fc6ca5576117601ac28692289 hg19 Primary Tumor C3N-01166-02 .high_cov -C3N-01167.MethArray.Green.T C3N-01167 PDA Methylation Array tumor CPT0087890010 202184900110_R04C01_Grn.idat 13676256 IDAT Green b21e4860-95ff-4ca0-9ec6-6b6c922ff476 439a4d0c25659ebd1e67295e9493d51a NA Primary Tumor C3N-01167-01,C3N-01167-02 -C3N-01167.MethArray.Red.T C3N-01167 PDA Methylation Array tumor CPT0087890010 202184900110_R04C01_Red.idat 13676256 IDAT Red 04d9045e-ee0e-45ba-b936-893433c0beaa 3df10965e99ba4fe57ff0b4b8425827d NA Primary Tumor C3N-01167-01,C3N-01167-02 +C3N-01167.MethArray.Green.T.DEEP_vv7A3m C3N-01167 PDA Methylation Array tumor CPT0087890010 202184900110_R04C01_Grn.idat 13676256 IDAT Green b21e4860-95ff-4ca0-9ec6-6b6c922ff476 439a4d0c25659ebd1e67295e9493d51a NA Primary Tumor C3N-01167-01,C3N-01167-02 deep_sequencing DEEP_vv7A3m Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01167.MethArray.Red.T.DEEP_vv7A3m C3N-01167 PDA Methylation Array tumor CPT0087890010 202184900110_R04C01_Red.idat 13676256 IDAT Red 04d9045e-ee0e-45ba-b936-893433c0beaa 3df10965e99ba4fe57ff0b4b8425827d NA Primary Tumor C3N-01167-01,C3N-01167-02 deep_sequencing DEEP_vv7A3m Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01167.miRNA-Seq.T C3N-01167 PDA miRNA-Seq tumor CPT0087890007 181108_UNC31-K00269_0163_BH23TVBBXY_GTAGAG_S17_L008_R1_001.unaln.bam 254119241 BAM NA f5f8d15c-628d-4195-a6f6-26f09564156f 142fd8d5d61246976ecffccd90ef15fb NA Primary Tumor C3N-01167-01,C3N-01167-02 C3N-01167.miRNA-Seq.T.hg38 C3N-01167 PDA miRNA-Seq tumor CPT0087890007 41130c6f-2b96-4a59-b925-231a2ff55578_mirnaseq_gdc_realn.bam 279684342 BAM NA 4cbb6a21-b1d0-4c5c-a31d-2c833a0d586d b2ff3937436431ba9312731d232444ad hg38 Primary Tumor C3N-01167-01,C3N-01167-02 C3N-01167.RNA-Seq.chimeric.T.hg38 C3N-01167 PDA RNA-Seq tumor CPT0087890007 9e8ab4ab-80c8-415a-bd8c-628920e8f55a.rna_seq.chimeric.gdc_realn.bam 37864000 BAM chimeric 853f9ecb-c75a-4b5c-9ff5-815ea444d714 3f1a544dfe19067b0a0e445547d1e596 hg38 Primary Tumor C3N-01167-01,C3N-01167-02 @@ -20803,16 +20815,16 @@ C3N-01167.RNA-Seq.R2.T C3N-01167 PDA RNA-Seq tumor CPT0087890007 171011_UNC31-K0 C3N-01167.RNA-Seq.transcriptome.T.hg38 C3N-01167 PDA RNA-Seq tumor CPT0087890007 9e8ab4ab-80c8-415a-bd8c-628920e8f55a.rna_seq.transcriptome.gdc_realn.bam 11675727398 BAM transcriptome 9578a6d0-bef2-464a-939a-de6999f244c9 c02cd6518037de84187712346d86de81 hg38 Primary Tumor C3N-01167-01,C3N-01167-02 C3N-01167.WGS.N C3N-01167 PDA WGS blood_normal CPT0087930002 CPT0087930002.WholeGenome.RP-1303.bam 69761664267 BAM NA 48b529e9-a947-41b1-8a44-fb8dd09b3acd a02a2cd7d3136612ee9eebe1f41dc84b hg19 Blood Derived Normal C3N-01167-31 C3N-01167.WGS.N.hg38 C3N-01167 PDA WGS blood_normal CPT0087930002 c47a5d49-b24b-412d-824f-21f836a59334_gdc_realn.bam 105720714327 BAM NA b502d545-01f9-4dda-9d83-a66f7813fd85 d5ba1ccb60c54543467f2482671d5319 hg38 Blood Derived Normal C3N-01167-31 -C3N-01167.WGS.T C3N-01167 PDA WGS tumor CPT0087890010 CPT0087890010.WholeGenome.RP-1303.bam 63132249675 BAM NA 89a0c33f-5a3a-42fc-a1aa-b418c1b09ba3 1c561ef743ee2259ffac374279b77b9c hg19 Primary Tumor C3N-01167-01,C3N-01167-02 -C3N-01167.WGS.T.hg38 C3N-01167 PDA WGS tumor CPT0087890010 159f535d-6784-4b18-9307-baca63090431_gdc_realn.bam 93612947908 BAM NA 81127181-3b1d-41ee-9d65-e51e2a94c936 edfe20bbbf735f3f76a3e854c8262a8f hg38 Primary Tumor C3N-01167-01,C3N-01167-02 +C3N-01167.WGS.T.DEEP_vv7A3m C3N-01167 PDA WGS tumor CPT0087890010 CPT0087890010.WholeGenome.RP-1303.bam 63132249675 BAM NA 89a0c33f-5a3a-42fc-a1aa-b418c1b09ba3 1c561ef743ee2259ffac374279b77b9c hg19 Primary Tumor C3N-01167-01,C3N-01167-02 deep_sequencing DEEP_vv7A3m Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01167.WGS.T.DEEP_vv7A3m.hg38 C3N-01167 PDA WGS tumor CPT0087890010 159f535d-6784-4b18-9307-baca63090431_gdc_realn.bam 93612947908 BAM NA 81127181-3b1d-41ee-9d65-e51e2a94c936 edfe20bbbf735f3f76a3e854c8262a8f hg38 Primary Tumor C3N-01167-01,C3N-01167-02 deep_sequencing DEEP_vv7A3m Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01167.WXS.N C3N-01167 PDA WXS blood_normal CPT0087930002 CPT0087930002.WholeExome.RP-1303.bam 26889298256 BAM NA f7b62e25-0126-4e47-929a-7c8a074cfaa4 be043307858c4225f1c9fa600fe8fde6 hg19 Blood Derived Normal C3N-01167-31 C3N-01167.WXS.N.hg38 C3N-01167 PDA WXS blood_normal CPT0087930002 c47a5d49-b24b-412d-824f-21f836a59334_gdc_realn.bam 36278982609 BAM NA ffd844ae-0ab6-4ca7-bdca-32dca76c68fd d4a5401c45a6b9aedd6dc3f4db9b5057 hg38 Blood Derived Normal C3N-01167-31 -C3N-01167.WXS.T C3N-01167 PDA WXS tumor CPT0087890010 CPT0087890010.WholeExome.RP-1303.bam 49551655732 BAM NA 0b8ae712-2186-4eaf-8749-8cd09b52e852 78de9e762af9e5ab8519a87593a861af hg19 Primary Tumor C3N-01167-01,C3N-01167-02 -C3N-01167.WXS.T.hg38 C3N-01167 PDA WXS tumor CPT0087890010 159f535d-6784-4b18-9307-baca63090431_gdc_realn.bam 67994161946 BAM NA 7f03b83b-b345-4dab-a24f-1ba214d4ff76 7f5d788e7bd61dc9fbc306b4f9b003e7 hg38 Primary Tumor C3N-01167-01,C3N-01167-02 +C3N-01167.WXS.T.DEEP_vv7A3m C3N-01167 PDA WXS tumor CPT0087890010 CPT0087890010.WholeExome.RP-1303.bam 49551655732 BAM NA 0b8ae712-2186-4eaf-8749-8cd09b52e852 78de9e762af9e5ab8519a87593a861af hg19 Primary Tumor C3N-01167-01,C3N-01167-02 deep_sequencing DEEP_vv7A3m Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01167.WXS.T.DEEP_vv7A3m.hg38 C3N-01167 PDA WXS tumor CPT0087890010 159f535d-6784-4b18-9307-baca63090431_gdc_realn.bam 67994161946 BAM NA 7f03b83b-b345-4dab-a24f-1ba214d4ff76 7f5d788e7bd61dc9fbc306b4f9b003e7 hg38 Primary Tumor C3N-01167-01,C3N-01167-02 deep_sequencing DEEP_vv7A3m Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01167.WXS.T.hg38.high_cov C3N-01167 PDA WXS tumor CPT0087890010_1 0924992b-9855-45ac-afad-78328b72b3bf_wxs_gdc_realn.bam 100546528763 BAM NA 36226d14-d333-4dda-b678-14d83fc075eb a88e94fb8db63bbe0700bfb32c327971 hg38 Primary Tumor C3N-01167-02 .high_cov C3N-01167.WXS.T.high_cov C3N-01167 PDA WXS tumor CPT0087890010_1 CPT0087890010_1.WholeExome.RP-1303.bam 73438659348 BAM NA cdfb7a9e-276d-480c-8897-24362c7fd8a7 2c78f94786aad720a4df3c44e460f8ed hg19 Primary Tumor C3N-01167-02 .high_cov -C3N-01168.MethArray.Green.T C3N-01168 PDA Methylation Array tumor CPT0094030009 202234370079_R07C01_Grn.idat 13676231 IDAT Green affc4be9-7fab-49e4-9127-bb093b757b3a 78afb7104e79323ceef8edace1008678 NA Primary Tumor C3N-01168-02 -C3N-01168.MethArray.Red.T C3N-01168 PDA Methylation Array tumor CPT0094030009 202234370079_R07C01_Red.idat 13676231 IDAT Red c3226a70-61f5-498c-b4dc-cc996fdf50ce 5a80d00e85373307b76870c0c7ad461c NA Primary Tumor C3N-01168-02 +C3N-01168.MethArray.Green.T.DEEP_rWRLE4 C3N-01168 PDA Methylation Array tumor CPT0094030009 202234370079_R07C01_Grn.idat 13676231 IDAT Green affc4be9-7fab-49e4-9127-bb093b757b3a 78afb7104e79323ceef8edace1008678 NA Primary Tumor C3N-01168-02 deep_sequencing DEEP_rWRLE4 Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01168.MethArray.Red.T.DEEP_rWRLE4 C3N-01168 PDA Methylation Array tumor CPT0094030009 202234370079_R07C01_Red.idat 13676231 IDAT Red c3226a70-61f5-498c-b4dc-cc996fdf50ce 5a80d00e85373307b76870c0c7ad461c NA Primary Tumor C3N-01168-02 deep_sequencing DEEP_rWRLE4 Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01168.miRNA-Seq.T C3N-01168 PDA miRNA-Seq tumor CPT0094030006 180828_UNC32-K00270_0112_AHWTLNBBXX_CCAACA_S42_L007_R1_001.unaln.bam 238879218 BAM NA 2135e2ed-9156-44ab-9757-e1644237e949 2b0376a59d7d7091f1e377ffbe377ee8 NA Primary Tumor C3N-01168-02 C3N-01168.miRNA-Seq.T.hg38 C3N-01168 PDA miRNA-Seq tumor CPT0094030006 47cbc7a6-d354-483d-a044-5a02bdb74cf4_mirnaseq_gdc_realn.bam 266021926 BAM NA c238c28c-1a51-4f10-9d66-3e7c7e28d9b0 960ffc574b3348391db4ba89365dafb0 hg38 Primary Tumor C3N-01168-02 C3N-01168.RNA-Seq.chimeric.T.hg38 C3N-01168 PDA RNA-Seq tumor CPT0094030006 2153b0c8-f9a0-4c5c-b2be-4674dff93a1a.rna_seq.chimeric.gdc_realn.bam 28384289 BAM chimeric eb59862b-3456-4eab-b187-fe2eefd127c9 4ec1a354ff3ca22b3d8353db762eb1b5 hg38 Primary Tumor C3N-01168-02 @@ -20822,16 +20834,16 @@ C3N-01168.RNA-Seq.R2.T C3N-01168 PDA RNA-Seq tumor CPT0094030006 171129_UNC32-K0 C3N-01168.RNA-Seq.transcriptome.T.hg38 C3N-01168 PDA RNA-Seq tumor CPT0094030006 2153b0c8-f9a0-4c5c-b2be-4674dff93a1a.rna_seq.transcriptome.gdc_realn.bam 9560829815 BAM transcriptome f4265c04-b481-4f2c-a528-f166f04aa1c3 017b16139020d14ed6c7596b5e606c52 hg38 Primary Tumor C3N-01168-02 C3N-01168.WGS.N C3N-01168 PDA WGS blood_normal CPT0094070002 CPT0094070002.WholeGenome.RP-1303.bam 69357858638 BAM NA 6f117e25-801c-4d02-8a66-065d3e575ed2 7ffd583136695611d05a6b92d233411e hg19 Blood Derived Normal C3N-01168-31 C3N-01168.WGS.N.hg38 C3N-01168 PDA WGS blood_normal CPT0094070002 d3480ad0-6349-44d9-8329-e0a60e2bf8a8_wgs_gdc_realn.bam 101831517163 BAM NA d10bde0c-495c-4b54-8b2d-a0bef5483ee9 19dce619e920b3233dbc2516559ceae4 hg38 Blood Derived Normal C3N-01168-31 -C3N-01168.WGS.T C3N-01168 PDA WGS tumor CPT0094030009 CPT0094030009.WholeGenome.RP-1303.bam 64991506561 BAM NA 74920372-6abd-4999-842f-17df3f1e6b2c 51488b271a201f5e9c7cae0c94ebd9e1 hg19 Primary Tumor C3N-01168-02 -C3N-01168.WGS.T.hg38 C3N-01168 PDA WGS tumor CPT0094030009 ca8a6fce-c36c-45f5-95cb-fabf8a388422_wgs_gdc_realn.bam 96276758747 BAM NA 6bc87e89-0d51-452d-80d9-c186f04fb3a1 e05314b0c501ce15f2a7fff7d9807a04 hg38 Primary Tumor C3N-01168-02 +C3N-01168.WGS.T.DEEP_rWRLE4 C3N-01168 PDA WGS tumor CPT0094030009 CPT0094030009.WholeGenome.RP-1303.bam 64991506561 BAM NA 74920372-6abd-4999-842f-17df3f1e6b2c 51488b271a201f5e9c7cae0c94ebd9e1 hg19 Primary Tumor C3N-01168-02 deep_sequencing DEEP_rWRLE4 Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01168.WGS.T.DEEP_rWRLE4.hg38 C3N-01168 PDA WGS tumor CPT0094030009 ca8a6fce-c36c-45f5-95cb-fabf8a388422_wgs_gdc_realn.bam 96276758747 BAM NA 6bc87e89-0d51-452d-80d9-c186f04fb3a1 e05314b0c501ce15f2a7fff7d9807a04 hg38 Primary Tumor C3N-01168-02 deep_sequencing DEEP_rWRLE4 Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01168.WXS.N C3N-01168 PDA WXS blood_normal CPT0094070002 CPT0094070002.WholeExome.RP-1303.bam 29077544359 BAM NA 8c47b045-b4de-490c-a183-c900c967140a 3e0e509afe8bcb632c982b89c63a6893 hg19 Blood Derived Normal C3N-01168-31 C3N-01168.WXS.N.hg38 C3N-01168 PDA WXS blood_normal CPT0094070002 d3480ad0-6349-44d9-8329-e0a60e2bf8a8_wxs_gdc_realn.bam 39952170860 BAM NA a3bca5bf-5171-486b-ab6a-e8ab097b746f 74076f298445c84f0219f21b1443b905 hg38 Blood Derived Normal C3N-01168-31 -C3N-01168.WXS.T C3N-01168 PDA WXS tumor CPT0094030009 CPT0094030009.WholeExome.RP-1303.bam 39239567497 BAM NA a4c3da54-df24-4dac-abb7-fda9fe6eb476 ac3edda0deb80afabdaba11bbed04bf0 hg19 Primary Tumor C3N-01168-02 -C3N-01168.WXS.T.hg38 C3N-01168 PDA WXS tumor CPT0094030009 ca8a6fce-c36c-45f5-95cb-fabf8a388422_wxs_gdc_realn.bam 54439650740 BAM NA 562c6109-4681-450a-b982-cf0c46ffce63 7dfebb27e3832cbe06fc8255a6de8c56 hg38 Primary Tumor C3N-01168-02 +C3N-01168.WXS.T.DEEP_rWRLE4 C3N-01168 PDA WXS tumor CPT0094030009 CPT0094030009.WholeExome.RP-1303.bam 39239567497 BAM NA a4c3da54-df24-4dac-abb7-fda9fe6eb476 ac3edda0deb80afabdaba11bbed04bf0 hg19 Primary Tumor C3N-01168-02 deep_sequencing DEEP_rWRLE4 Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01168.WXS.T.DEEP_rWRLE4.hg38 C3N-01168 PDA WXS tumor CPT0094030009 ca8a6fce-c36c-45f5-95cb-fabf8a388422_wxs_gdc_realn.bam 54439650740 BAM NA 562c6109-4681-450a-b982-cf0c46ffce63 7dfebb27e3832cbe06fc8255a6de8c56 hg38 Primary Tumor C3N-01168-02 deep_sequencing DEEP_rWRLE4 Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01168.WXS.T.hg38.high_cov C3N-01168 PDA WXS tumor CPT0094030009_1 714bd893-759d-4fc2-916e-50538e843845_wxs_gdc_realn.bam 101689106154 BAM NA 99d3d536-08bf-4e9e-875d-62e43e0ab7e0 91c436af7de397baafb3138bc4c7a30c hg38 Primary Tumor C3N-01168-02 .high_cov C3N-01168.WXS.T.high_cov C3N-01168 PDA WXS tumor CPT0094030009_1 CPT0094030009_1.WholeExome.RP-1303.bam 73911542690 BAM NA b75873e4-d7b2-4e0a-8544-abef8934788e bce3c8f72f85adb28bc6cf51540972cf hg19 Primary Tumor C3N-01168-02 .high_cov -C3N-01169.MethArray.Green.T C3N-01169 PDA Methylation Array tumor CPT0094080010 202234380024_R07C01_Grn.idat 13676246 IDAT Green 1fa21d3b-2bf0-49e7-99cd-da3e15798d66 4b460bdba0a6b11bba369e58afbdcf01 NA Primary Tumor C3N-01169-01,C3N-01169-02 -C3N-01169.MethArray.Red.T C3N-01169 PDA Methylation Array tumor CPT0094080010 202234380024_R07C01_Red.idat 13676246 IDAT Red cb7c33a9-4017-4e5c-9318-4ec3c91d7a27 9f3a7851cc3458294111f7c04053d0c1 NA Primary Tumor C3N-01169-01,C3N-01169-02 +C3N-01169.MethArray.Green.T.DEEP_v6l7gg C3N-01169 PDA Methylation Array tumor CPT0094080010 202234380024_R07C01_Grn.idat 13676246 IDAT Green 1fa21d3b-2bf0-49e7-99cd-da3e15798d66 4b460bdba0a6b11bba369e58afbdcf01 NA Primary Tumor C3N-01169-01,C3N-01169-02 deep_sequencing DEEP_v6l7gg Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01169.MethArray.Red.T.DEEP_v6l7gg C3N-01169 PDA Methylation Array tumor CPT0094080010 202234380024_R07C01_Red.idat 13676246 IDAT Red cb7c33a9-4017-4e5c-9318-4ec3c91d7a27 9f3a7851cc3458294111f7c04053d0c1 NA Primary Tumor C3N-01169-01,C3N-01169-02 deep_sequencing DEEP_v6l7gg Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01169.miRNA-Seq.T C3N-01169 PDA miRNA-Seq tumor CPT0094080007 180828_UNC32-K00270_0112_AHWTLNBBXX_CGGAAT_S43_L007_R1_001.unaln.bam 332715692 BAM NA 05341272-cc50-4983-9049-6f4f3adab8b3 7585837be3f7397033bc07ed4c9a2ded NA Primary Tumor C3N-01169-01,C3N-01169-02 C3N-01169.miRNA-Seq.T.hg38 C3N-01169 PDA miRNA-Seq tumor CPT0094080007 69fa27fe-9baa-4599-9490-8c89ec48dcf3_mirnaseq_gdc_realn.bam 371346861 BAM NA 7c3967af-b323-4b32-b260-7d807965857b 75b7685cb199957a2c1ccee67b4131fe hg38 Primary Tumor C3N-01169-01,C3N-01169-02 C3N-01169.RNA-Seq.chimeric.T.hg38 C3N-01169 PDA RNA-Seq tumor CPT0094080007 23e43a62-39b6-445c-ae96-871d1ed0981f.rna_seq.chimeric.gdc_realn.bam 33620680 BAM chimeric 8ef698c5-5eea-4978-a0b7-dabe48c78e32 7a603b846a69bb5889017be2e65db401 hg38 Primary Tumor C3N-01169-01,C3N-01169-02 @@ -20841,12 +20853,12 @@ C3N-01169.RNA-Seq.R2.T C3N-01169 PDA RNA-Seq tumor CPT0094080007 171129_UNC32-K0 C3N-01169.RNA-Seq.transcriptome.T.hg38 C3N-01169 PDA RNA-Seq tumor CPT0094080007 23e43a62-39b6-445c-ae96-871d1ed0981f.rna_seq.transcriptome.gdc_realn.bam 9840276769 BAM transcriptome 95b4fb78-b262-45a1-915c-b9d16ba30584 70351e48f8c56d4f8140ac7e3b73d582 hg38 Primary Tumor C3N-01169-01,C3N-01169-02 C3N-01169.WGS.N C3N-01169 PDA WGS blood_normal CPT0094120002 CPT0094120002.WholeGenome.RP-1303.bam 64766660666 BAM NA 35cdbd74-c098-4c94-b1bd-4d3fb014ef3a 42a7f644578cf43b84d6f4c16e309143 hg19 Blood Derived Normal C3N-01169-31 C3N-01169.WGS.N.hg38 C3N-01169 PDA WGS blood_normal CPT0094120002 6c765351-e5e5-4a8a-8ab6-9f73805f2105_wgs_gdc_realn.bam 94529824896 BAM NA 63b1585a-f981-4312-8d8d-4c9f7756afad 726eb433d8668c5f6e023fdc74592e9d hg38 Blood Derived Normal C3N-01169-31 -C3N-01169.WGS.T C3N-01169 PDA WGS tumor CPT0094080010 CPT0094080010.WholeGenome.RP-1303.bam 128041173351 BAM NA 9688ca54-5be3-4e0c-90d2-9cfaf8be7487 2566c15390e2d213044f87fc371d3bf7 hg19 Primary Tumor C3N-01169-01,C3N-01169-02 -C3N-01169.WGS.T.hg38 C3N-01169 PDA WGS tumor CPT0094080010 a011807b-3bde-4f2c-a905-84863cb877a3_wgs_gdc_realn.bam 185446057812 BAM NA 0aea19fa-217b-4929-9413-d6bbc96f53df 8015ce1d9125271b844073ae7d57e962 hg38 Primary Tumor C3N-01169-01,C3N-01169-02 +C3N-01169.WGS.T.DEEP_v6l7gg C3N-01169 PDA WGS tumor CPT0094080010 CPT0094080010.WholeGenome.RP-1303.bam 128041173351 BAM NA 9688ca54-5be3-4e0c-90d2-9cfaf8be7487 2566c15390e2d213044f87fc371d3bf7 hg19 Primary Tumor C3N-01169-01,C3N-01169-02 deep_sequencing DEEP_v6l7gg Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01169.WGS.T.DEEP_v6l7gg.hg38 C3N-01169 PDA WGS tumor CPT0094080010 a011807b-3bde-4f2c-a905-84863cb877a3_wgs_gdc_realn.bam 185446057812 BAM NA 0aea19fa-217b-4929-9413-d6bbc96f53df 8015ce1d9125271b844073ae7d57e962 hg38 Primary Tumor C3N-01169-01,C3N-01169-02 deep_sequencing DEEP_v6l7gg Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01169.WXS.N C3N-01169 PDA WXS blood_normal CPT0094120002 CPT0094120002.WholeExome.RP-1303.bam 31812142414 BAM NA 1f4efc95-58c3-4022-8abb-3928e239e26e f9a4efbd77c15abe89d5159d48ccbffa hg19 Blood Derived Normal C3N-01169-31 C3N-01169.WXS.N.hg38 C3N-01169 PDA WXS blood_normal CPT0094120002 6c765351-e5e5-4a8a-8ab6-9f73805f2105_wxs_gdc_realn.bam 43129814641 BAM NA 39db50ed-a362-4bed-9669-1d5afd4aaf45 5a67b118d03a2628bc52aa2b6c3d8419 hg38 Blood Derived Normal C3N-01169-31 -C3N-01169.WXS.T C3N-01169 PDA WXS tumor CPT0094080010 CPT0094080010.WholeExome.RP-1303.bam 39361221345 BAM NA c2b594a4-88d9-4537-b3b1-c6eb02b295de 25ceb4bfcc50f7a7c53abb31419af7c5 hg19 Primary Tumor C3N-01169-01,C3N-01169-02 -C3N-01169.WXS.T.hg38 C3N-01169 PDA WXS tumor CPT0094080010 a011807b-3bde-4f2c-a905-84863cb877a3_wxs_gdc_realn.bam 54937541768 BAM NA e97151dd-2971-46dd-9425-a01b0a94d11f 3bd969cc930026f67ccf0a4053b4e1c6 hg38 Primary Tumor C3N-01169-01,C3N-01169-02 +C3N-01169.WXS.T.DEEP_v6l7gg C3N-01169 PDA WXS tumor CPT0094080010 CPT0094080010.WholeExome.RP-1303.bam 39361221345 BAM NA c2b594a4-88d9-4537-b3b1-c6eb02b295de 25ceb4bfcc50f7a7c53abb31419af7c5 hg19 Primary Tumor C3N-01169-01,C3N-01169-02 deep_sequencing DEEP_v6l7gg Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01169.WXS.T.DEEP_v6l7gg.hg38 C3N-01169 PDA WXS tumor CPT0094080010 a011807b-3bde-4f2c-a905-84863cb877a3_wxs_gdc_realn.bam 54937541768 BAM NA e97151dd-2971-46dd-9425-a01b0a94d11f 3bd969cc930026f67ccf0a4053b4e1c6 hg38 Primary Tumor C3N-01169-01,C3N-01169-02 deep_sequencing DEEP_v6l7gg Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01169.WXS.T.hg38.high_cov C3N-01169 PDA WXS tumor CPT0094080010_1 5f2df483-39d3-4424-9391-e48b972eed39_wxs_gdc_realn.bam 89047991920 BAM NA 3a56ebab-1d20-4417-a1e6-a3c777079e7a 8ffe21d411ec0db682d8f057ff0688b0 hg38 Primary Tumor C3N-01169-01 .high_cov C3N-01169.WXS.T.high_cov C3N-01169 PDA WXS tumor CPT0094080010_1 CPT0094080010_1.WholeExome.RP-1303.bam 64278535243 BAM NA 414d2442-e4e5-4ccf-a665-00b624801fa1 4e994d5cd77b3d89fecd6f1764aa1405 hg19 Primary Tumor C3N-01169-01 .high_cov C3N-01171.MethArray.Green.T C3N-01171 UCEC Methylation Array tumor CPT0095190009 202234380017_R05C01_Grn.idat 13676231 IDAT Green 0b94642b-47ea-4803-95b0-96218321b289 5ed3b656dea823cd34774e1aee6f08c4 NA Primary Tumor C3N-01171-03 @@ -21813,8 +21825,8 @@ C3N-01379.WXS.T C3N-01379 PDA WXS tumor CPT0088840010 CPT0088840010.WholeExome.R C3N-01379.WXS.T.hg38 C3N-01379 PDA WXS tumor CPT0088840010 358e92fb-9223-4b81-bd63-65d54ca74472_gdc_realn.bam 43144516005 BAM NA f4baf547-994f-4251-b408-f54c033ebfa7 0273d0dd587c0e9bbc995e6183daa2ae hg38 Primary Tumor C3N-01379-02,C3N-01379-03 C3N-01379.WXS.T.hg38.high_cov C3N-01379 PDA WXS tumor CPT0088840010_1 a163fbd1-97f0-44e8-8b1b-245624d0c527_wxs_gdc_realn.bam 70508072968 BAM NA c69a480c-4977-4a71-96fe-1c54544db6e7 efb70d8a149112b44588c17fe0e46988 hg38 Primary Tumor C3N-01379-03 .high_cov C3N-01379.WXS.T.high_cov C3N-01379 PDA WXS tumor CPT0088840010_1 CPT0088840010_1.WholeExome.RP-1303.bam 51096887089 BAM NA 896a7a4e-917e-4c11-abb3-9c0c9053d7fa 1f33f0604b89a5215788b1d27c499e0c hg19 Primary Tumor C3N-01379-03 .high_cov -C3N-01380.MethArray.Green.T C3N-01380 PDA Methylation Array tumor CPT0088260010 202163550007_R04C01_Grn.idat 13676226 IDAT Green 20df486d-a9c4-4ac8-b840-a1ec9c9a4d3c 27439d6ab207974bee294c22ad952f4d NA Primary Tumor C3N-01380-01,C3N-01380-03 -C3N-01380.MethArray.Red.T C3N-01380 PDA Methylation Array tumor CPT0088260010 202163550007_R04C01_Red.idat 13676226 IDAT Red 6d3b4a7b-949f-487c-97ca-cac7222520d6 609fe85481f25b735f491e41455f64b9 NA Primary Tumor C3N-01380-01,C3N-01380-03 +C3N-01380.MethArray.Green.T.DEEP_vvplPL C3N-01380 PDA Methylation Array tumor CPT0088260010 202163550007_R04C01_Grn.idat 13676226 IDAT Green 20df486d-a9c4-4ac8-b840-a1ec9c9a4d3c 27439d6ab207974bee294c22ad952f4d NA Primary Tumor C3N-01380-01,C3N-01380-03 deep_sequencing DEEP_vvplPL Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01380.MethArray.Red.T.DEEP_vvplPL C3N-01380 PDA Methylation Array tumor CPT0088260010 202163550007_R04C01_Red.idat 13676226 IDAT Red 6d3b4a7b-949f-487c-97ca-cac7222520d6 609fe85481f25b735f491e41455f64b9 NA Primary Tumor C3N-01380-01,C3N-01380-03 deep_sequencing DEEP_vvplPL Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01380.miRNA-Seq.T C3N-01380 PDA miRNA-Seq tumor CPT0088260007 181108_UNC31-K00269_0163_BH23TVBBXY_GATCAG_S9_L008_R1_001.unaln.bam 201245981 BAM NA 784334e9-5638-4a8f-9f6c-ba1342bbaec1 8df7bbb7c77944046663275fc709d634 NA Primary Tumor C3N-01380-01,C3N-01380-03 C3N-01380.miRNA-Seq.T.hg38 C3N-01380 PDA miRNA-Seq tumor CPT0088260007 e24e5775-5795-4f87-b95b-e6ad6284712b_mirnaseq_gdc_realn.bam 223779343 BAM NA 2754e5af-3557-4d8f-97d4-0d5f94093c48 6d079f5bb5b772b9078919114c4359e1 hg38 Primary Tumor C3N-01380-01,C3N-01380-03 C3N-01380.RNA-Seq.chimeric.T.hg38 C3N-01380 PDA RNA-Seq tumor CPT0088260007 66f631d6-56d1-4120-b757-89c567c621c7.rna_seq.chimeric.gdc_realn.bam 36244829 BAM chimeric c7e2b631-b22c-4593-b07d-c33c3b99e8c4 15da54efd48f819ef31f914a9e8b03fa hg38 Primary Tumor C3N-01380-01,C3N-01380-03 @@ -21824,12 +21836,12 @@ C3N-01380.RNA-Seq.R2.T C3N-01380 PDA RNA-Seq tumor CPT0088260007 170908_UNC31-K0 C3N-01380.RNA-Seq.transcriptome.T.hg38 C3N-01380 PDA RNA-Seq tumor CPT0088260007 66f631d6-56d1-4120-b757-89c567c621c7.rna_seq.transcriptome.gdc_realn.bam 10158768213 BAM transcriptome 284c1c13-b874-4964-bfb2-d0c462b7049c 1179c99642066bdd08b7ee0f7ccbe8d8 hg38 Primary Tumor C3N-01380-01,C3N-01380-03 C3N-01380.WGS.N C3N-01380 PDA WGS blood_normal CPT0088300002 CPT0088300002.WholeGenome.RP-1303.bam 64652874371 BAM NA ff9ea438-f289-48ce-bb6e-29c9c35d3cd0 b8368df7819498a8f1af1e6130869766 hg19 Blood Derived Normal C3N-01380-31 C3N-01380.WGS.N.hg38 C3N-01380 PDA WGS blood_normal CPT0088300002 2067ab53-1961-44eb-be0e-f45c0455aa68_gdc_realn.bam 96307704857 BAM NA c0939d37-8ae9-4f0e-a4d7-c4b43a178f19 48d912561f57aa4cf60687ad993dae29 hg38 Blood Derived Normal C3N-01380-31 -C3N-01380.WGS.T C3N-01380 PDA WGS tumor CPT0088260010 CPT0088260010.WholeGenome.RP-1303.bam 64112950220 BAM NA b0554a96-b25f-4492-a28f-08ff8cb3e0ac 7aed6f06c99c58a16b9445d092d6161e hg19 Primary Tumor C3N-01380-01,C3N-01380-03 -C3N-01380.WGS.T.hg38 C3N-01380 PDA WGS tumor CPT0088260010 1a8d6818-f4d7-41a3-bd6c-fe47b6903200_gdc_realn.bam 97247490497 BAM NA a36701b5-5233-479f-94e9-add8ed53b7e2 28871b49a6ad65af43003a45ef991833 hg38 Primary Tumor C3N-01380-01,C3N-01380-03 +C3N-01380.WGS.T.DEEP_vvplPL C3N-01380 PDA WGS tumor CPT0088260010 CPT0088260010.WholeGenome.RP-1303.bam 64112950220 BAM NA b0554a96-b25f-4492-a28f-08ff8cb3e0ac 7aed6f06c99c58a16b9445d092d6161e hg19 Primary Tumor C3N-01380-01,C3N-01380-03 deep_sequencing DEEP_vvplPL Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01380.WGS.T.DEEP_vvplPL.hg38 C3N-01380 PDA WGS tumor CPT0088260010 1a8d6818-f4d7-41a3-bd6c-fe47b6903200_gdc_realn.bam 97247490497 BAM NA a36701b5-5233-479f-94e9-add8ed53b7e2 28871b49a6ad65af43003a45ef991833 hg38 Primary Tumor C3N-01380-01,C3N-01380-03 deep_sequencing DEEP_vvplPL Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01380.WXS.N C3N-01380 PDA WXS blood_normal CPT0088300002 CPT0088300002.WholeExome.RP-1303.bam 27979562421 BAM NA f209fca0-cbfc-405d-a850-10a33196ced2 ac20be1c1ec81acfc7b9abf2bd0530c0 hg19 Blood Derived Normal C3N-01380-31 C3N-01380.WXS.N.hg38 C3N-01380 PDA WXS blood_normal CPT0088300002 2067ab53-1961-44eb-be0e-f45c0455aa68_gdc_realn.bam 37912026073 BAM NA dc58f100-c805-4bfd-b7bf-099b134d5355 0f74bbb060b4f7f33a611431ddaf2c6b hg38 Blood Derived Normal C3N-01380-31 -C3N-01380.WXS.T C3N-01380 PDA WXS tumor CPT0088260010 CPT0088260010.WholeExome.RP-1303.bam 35771944400 BAM NA 01c7b559-cf2f-4008-ac18-341b0bba8615 99b4fb0794617f2900e3648ff7edc38d hg19 Primary Tumor C3N-01380-01,C3N-01380-03 -C3N-01380.WXS.T.hg38 C3N-01380 PDA WXS tumor CPT0088260010 1a8d6818-f4d7-41a3-bd6c-fe47b6903200_gdc_realn.bam 49604077098 BAM NA 84697566-2ee3-4f9f-9b76-19f884bafd27 e868a59bff6a1ef5e3ed99bb905634ee hg38 Primary Tumor C3N-01380-01,C3N-01380-03 +C3N-01380.WXS.T.DEEP_vvplPL C3N-01380 PDA WXS tumor CPT0088260010 CPT0088260010.WholeExome.RP-1303.bam 35771944400 BAM NA 01c7b559-cf2f-4008-ac18-341b0bba8615 99b4fb0794617f2900e3648ff7edc38d hg19 Primary Tumor C3N-01380-01,C3N-01380-03 deep_sequencing DEEP_vvplPL Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01380.WXS.T.DEEP_vvplPL.hg38 C3N-01380 PDA WXS tumor CPT0088260010 1a8d6818-f4d7-41a3-bd6c-fe47b6903200_gdc_realn.bam 49604077098 BAM NA 84697566-2ee3-4f9f-9b76-19f884bafd27 e868a59bff6a1ef5e3ed99bb905634ee hg38 Primary Tumor C3N-01380-01,C3N-01380-03 deep_sequencing DEEP_vvplPL Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01380.WXS.T.hg38.high_cov C3N-01380 PDA WXS tumor CPT0088260010_1 04f52594-db73-49d9-a615-6b08a12bd361_wxs_gdc_realn.bam 82121699101 BAM NA 1937ad57-852b-4924-9d72-82a51a3c3005 e40c31b28e18687c668bc43a76c58d13 hg38 Primary Tumor C3N-01380-03 .high_cov C3N-01380.WXS.T.high_cov C3N-01380 PDA WXS tumor CPT0088260010_1 CPT0088260010_1.WholeExome.RP-1303.bam 59273893283 BAM NA 64694500-12f3-4191-81c9-5d422b9556f7 1bb67949608f5de8d7bc71162a1ce322 hg19 Primary Tumor C3N-01380-03 .high_cov C3N-01381.MethArray.Green.T C3N-01381 PDA Methylation Array tumor CPT0094130010 202234380024_R08C01_Grn.idat 13676246 IDAT Green 8311a8e3-65c5-41d1-8ecd-6d2c81e1091f 44454b8fc85fca513f18a2f5c46d2de8 NA Primary Tumor C3N-01381-01,C3N-01381-02 @@ -21890,6 +21902,8 @@ C3N-01383.WXS.T C3N-01383 PDA WXS tumor CPT0094230010 CPT0094230010.WholeExome.R C3N-01383.WXS.T.hg38 C3N-01383 PDA WXS tumor CPT0094230010 84eb0d82-6640-4db2-a981-44810476cca7_wxs_gdc_realn.bam 46403245903 BAM NA 1c05d345-e7e0-4082-a3b3-f60c51ffe779 154930efd7d8f6074e5614a93485ff6e hg38 Primary Tumor C3N-01383-01,C3N-01383-03 C3N-01383.WXS.T.hg38.high_cov C3N-01383 PDA WXS tumor CPT0094230010_1 75bb8fa6-86ac-434f-afd7-12332afe19f1_wxs_gdc_realn.bam 78814281670 BAM NA 1981d72f-4966-4b2c-9ee7-845c9791f6d9 728c5b3861b1f07552fd9bf872fcf35d hg38 Primary Tumor C3N-01383-03 .high_cov C3N-01383.WXS.T.high_cov C3N-01383 PDA WXS tumor CPT0094230010_1 CPT0094230010_1.WholeExome.RP-1303.bam 57192231159 BAM NA d3f25d43-c678-4a66-9485-47ff3a1b9cf9 391f291d8a0e2700033e3b713eb5704f hg19 Primary Tumor C3N-01383-03 .high_cov +C3N-01385.RNA-Seq.R1.T C3N-01385 PDA RNA-Seq tumor CPT0162230029 200807_UNC32-K00270_0255_AHHY2WBBXY_ACACTAAG-ATCCATAT_S12_L008_R1_001.fastq.gz 4922822305 FASTQ NA 4799b1ce-1a07-4ab4-a176-22371dbfbba7 e40d4a33f316383866d4af07cfbf7e9a NA Primary Tumor C3N-01385-02 +C3N-01385.RNA-Seq.R2.T C3N-01385 PDA RNA-Seq tumor CPT0162230029 200807_UNC32-K00270_0255_AHHY2WBBXY_ACACTAAG-ATCCATAT_S12_L008_R2_001.fastq.gz 5749298642 FASTQ NA 6b5fe0a9-edcc-4108-86a3-d2f6c034e8cf 4429ae00d936c07b0072846ab6237749 NA Primary Tumor C3N-01385-02 C3N-01388.MethArray.Green.T.deprecated C3N-01388 PDA Methylation Array tumor CPT0088320009 202178770079_R07C01_Grn.idat 13676241 IDAT Green 40305a71-642d-4f9b-9a57-75afad6e456c f46eb3c1df3fcf5e5a974866592e7470 NA Primary Tumor C3N-01388-03 .deprecated C3N-01388.MethArray.Red.T.deprecated C3N-01388 PDA Methylation Array tumor CPT0088320009 202178770079_R07C01_Red.idat 13676241 IDAT Red 0b33687a-fbe4-41e3-be90-b1a254a60172 dd7300f687d0023060df6bb8123b5863 NA Primary Tumor C3N-01388-03 .deprecated C3N-01388.miRNA-Seq.T C3N-01388 PDA miRNA-Seq tumor CPT0088320006 181108_UNC31-K00269_0163_BH23TVBBXY_TAGCTT_S10_L008_R1_001.unaln.bam 270159749 BAM NA b245afc2-1540-4b04-8cc3-a4bf672396c7 ed2f88d594cfd15afd7331c994375fc3 NA Primary Tumor C3N-01388-03 @@ -22230,9 +22244,9 @@ C3N-01417.WXS.N C3N-01417 LUAD WXS blood_normal CPT0108220004 CPT0108220004.Whol C3N-01417.WXS.N.hg38 C3N-01417 LUAD WXS blood_normal CPT0108220004 f37e81f6-1671-4e3d-a651-7c6f9458de96_wxs_gdc_realn.bam 33377639317 BAM NA b0e55d39-f823-42a5-a1dc-6be52fdb54eb 4bb1bbb7df97c9927b4a50fc7ee32749 hg38 Blood Derived Normal C3N-01417-71 C3N-01417.WXS.T C3N-01417 LUAD WXS tumor CPT0105780009 CPT0105780009.WholeExome.RP-1303.bam 21688050232 BAM NA a681fdff-ea50-4cd7-9c28-720098dffd62 f166319b7df898bbae8c51355a813fbc hg19 Primary Tumor C3N-01417-04 C3N-01417.WXS.T.hg38 C3N-01417 LUAD WXS tumor CPT0105780009 9aff0957-aa05-46ff-8e72-f1766e9f011a_wxs_gdc_realn.bam 30119843260 BAM NA 1f71eccc-f761-42b6-9be7-84810f109131 d9081130bf3293db3d88ff398a79e6b3 hg38 Primary Tumor C3N-01417-04 -C3N-01419.MethArray.Green.A C3N-01419 LUAD Methylation Array tissue_normal CPT0118060008 203273630048_R05C01_Grn.idat 13676231 IDAT Green ad890daa-667b-4a11-989c-24708529b549 c4a2a5189b2e4a51d0a1a9420053b429 NA Solid Tissue Normal C3N-01419-06 +C3N-01419.MethArray.Green.A.ADNA_q19J5R C3N-01419 LUAD Methylation Array tissue_normal CPT0118060008 203273630048_R05C01_Grn.idat 13676231 IDAT Green ad890daa-667b-4a11-989c-24708529b549 c4a2a5189b2e4a51d0a1a9420053b429 NA Solid Tissue Normal C3N-01419-06 additional_DNA ADNA_q19J5R Duplicate item: Additional DNA requested C3N-01419.MethArray.Green.T C3N-01419 LUAD Methylation Array tumor CPT0118040009 203220070151_R02C01_Grn.idat 13676231 IDAT Green 69fed520-468c-4014-9a62-a7eff168fe56 66c6143e8caaa31f5c5916dc714667dd NA Primary Tumor C3N-01419-03 -C3N-01419.MethArray.Red.A C3N-01419 LUAD Methylation Array tissue_normal CPT0118060008 203273630048_R05C01_Red.idat 13676231 IDAT Red 4a1ea9d8-30e6-4282-8b05-373843c842b5 cc6b2c0ff47be30f235f364c3cc1554c NA Solid Tissue Normal C3N-01419-06 +C3N-01419.MethArray.Red.A.ADNA_q19J5R C3N-01419 LUAD Methylation Array tissue_normal CPT0118060008 203273630048_R05C01_Red.idat 13676231 IDAT Red 4a1ea9d8-30e6-4282-8b05-373843c842b5 cc6b2c0ff47be30f235f364c3cc1554c NA Solid Tissue Normal C3N-01419-06 additional_DNA ADNA_q19J5R Duplicate item: Additional DNA requested C3N-01419.MethArray.Red.T C3N-01419 LUAD Methylation Array tumor CPT0118040009 203220070151_R02C01_Red.idat 13676231 IDAT Red 48e7bbd4-6be2-462b-802c-aa72b695156d 2757908ad49435e3d63c1918ec5d87e0 NA Primary Tumor C3N-01419-03 C3N-01419.miRNA-Seq.A C3N-01419 LUAD miRNA-Seq tissue_normal CPT0118060005 190108_UNC31-K00269_0176_AHYGLVBBXX_CTATAC_S39_L003_R1_001.unaln.bam 241720051 BAM NA 56e91617-a1e8-467b-8fec-53a6701c1abe 3d2bcf05d914d6c38e4a6e3945f24c10 NA Solid Tissue Normal C3N-01419-06 C3N-01419.miRNA-Seq.A.hg38 C3N-01419 LUAD miRNA-Seq tissue_normal CPT0118060005 a3b47e97-bc4c-4415-bec4-cd7be6de9b63_mirnaseq_gdc_realn.bam 261040786 BAM NA 9911b26d-1535-405c-8a07-348e67db1e34 edfdc65121dcd1c7c6f10302ee7983fd hg38 Solid Tissue Normal C3N-01419-06 @@ -22248,14 +22262,14 @@ C3N-01419.RNA-Seq.R2.A C3N-01419 LUAD RNA-Seq tissue_normal CPT0118060005 181207 C3N-01419.RNA-Seq.R2.T C3N-01419 LUAD RNA-Seq tumor CPT0118040006 181207_UNC32-K00270_0137_BH2LYCBBXY_TAGCTT_S6_L008_R2_001.fastq.gz 4535754942 FASTQ NA 800d2b72-c4e3-42b9-b976-bf3216ff2412 292b1443536221f337e595d6c93d6a98 NA Primary Tumor C3N-01419-03 C3N-01419.RNA-Seq.transcriptome.A.hg38 C3N-01419 LUAD RNA-Seq tissue_normal CPT0118060005 b176a1f0-bfc5-4c37-87da-ab379b0b5671.rna_seq.transcriptome.gdc_realn.bam 10199198633 BAM transcriptome 0860cf4a-30ee-4217-8be3-dd1f8e8ea16f d242631dd788a0a03ab2c5adbc104f82 hg38 Solid Tissue Normal C3N-01419-06 C3N-01419.RNA-Seq.transcriptome.T.hg38 C3N-01419 LUAD RNA-Seq tumor CPT0118040006 4f44029c-4a2f-4951-9d69-15a771652e70.rna_seq.transcriptome.gdc_realn.bam 12536802856 BAM transcriptome 8a1adb30-d88c-415f-a728-e8fc420b1b21 74c5b26df69ed371a74b33f3d3082b05 hg38 Primary Tumor C3N-01419-03 -C3N-01419.WGS.A C3N-01419 LUAD WGS tissue_normal CPT0118060008 CPT0118060008.WholeGenome.RP-1303.bam 57693916713 BAM NA 5f48fc7c-cffd-488e-a7d2-0b39b62f9db2 61a18698f2d3f3fba4b14e76ee0efd41 hg19 Solid Tissue Normal C3N-01419-06 -C3N-01419.WGS.A.hg38 C3N-01419 LUAD WGS tissue_normal CPT0118060008 41fbeb7b-f0e1-4923-99d4-bf779f8459f2_wgs_gdc_realn.bam 84508537406 BAM NA f8c153df-4c3d-43b9-b566-dba5e7402d4a 8840539f4bad17170430c1b251148cab hg38 Solid Tissue Normal C3N-01419-06 +C3N-01419.WGS.A.ADNA_q19J5R C3N-01419 LUAD WGS tissue_normal CPT0118060008 CPT0118060008.WholeGenome.RP-1303.bam 57693916713 BAM NA 5f48fc7c-cffd-488e-a7d2-0b39b62f9db2 61a18698f2d3f3fba4b14e76ee0efd41 hg19 Solid Tissue Normal C3N-01419-06 additional_DNA ADNA_q19J5R Duplicate item: Additional DNA requested +C3N-01419.WGS.A.ADNA_q19J5R.hg38 C3N-01419 LUAD WGS tissue_normal CPT0118060008 41fbeb7b-f0e1-4923-99d4-bf779f8459f2_wgs_gdc_realn.bam 84508537406 BAM NA f8c153df-4c3d-43b9-b566-dba5e7402d4a 8840539f4bad17170430c1b251148cab hg38 Solid Tissue Normal C3N-01419-06 additional_DNA ADNA_q19J5R Duplicate item: Additional DNA requested C3N-01419.WGS.N C3N-01419 LUAD WGS blood_normal CPT0119310002 CPT0119310002.WholeGenome.RP-1303.bam 61749472469 BAM NA 1f0aa478-aaed-4214-b69c-c791e8765ab1 bef01d5668871992b23f3ee412d5df27 hg19 Blood Derived Normal C3N-01419-75 C3N-01419.WGS.N.hg38 C3N-01419 LUAD WGS blood_normal CPT0119310002 8541ee06-47ca-4632-af45-dcf0ae9e50a2_wgs_gdc_realn.bam 90725050575 BAM NA 558c8e7a-0b8e-468a-a47d-c9ecf7f3fed5 9427e1273f17143aa67ced86a7505c9a hg38 Blood Derived Normal C3N-01419-75 C3N-01419.WGS.T C3N-01419 LUAD WGS tumor CPT0118040009 CPT0118040009.WholeGenome.RP-1303.bam 57876996791 BAM NA 99832e7c-64cd-401b-92a9-934dd4941ab3 348e6ffcc2f87eb7827d975b6a11771a hg19 Primary Tumor C3N-01419-03 C3N-01419.WGS.T.hg38 C3N-01419 LUAD WGS tumor CPT0118040009 b6f5e659-0d84-4f62-b599-914804ce42fb_wgs_gdc_realn.bam 83725092795 BAM NA 7a83537b-30d6-4fdf-91c1-4796e008dbaf ba39972005ccf41e12cd548ea0ad9c1e hg38 Primary Tumor C3N-01419-03 -C3N-01419.WXS.A C3N-01419 LUAD WXS tissue_normal CPT0118060008 CPT0118060008.WholeExome.RP-1303.bam 19620688707 BAM NA 6428a44f-bbc5-4a1a-a076-918ea085054d 026e5e71897df9bf48a70b96cc2ac4a2 hg19 Solid Tissue Normal C3N-01419-06 -C3N-01419.WXS.A.hg38 C3N-01419 LUAD WXS tissue_normal CPT0118060008 41fbeb7b-f0e1-4923-99d4-bf779f8459f2_wxs_gdc_realn.bam 26719876766 BAM NA bbd7996a-16de-44ee-b0d7-959819b02e9b f5a9790e8ff6a047f147b629581f2515 hg38 Solid Tissue Normal C3N-01419-06 +C3N-01419.WXS.A.ADNA_q19J5R C3N-01419 LUAD WXS tissue_normal CPT0118060008 CPT0118060008.WholeExome.RP-1303.bam 19620688707 BAM NA 6428a44f-bbc5-4a1a-a076-918ea085054d 026e5e71897df9bf48a70b96cc2ac4a2 hg19 Solid Tissue Normal C3N-01419-06 additional_DNA ADNA_q19J5R Duplicate item: Additional DNA requested +C3N-01419.WXS.A.ADNA_q19J5R.hg38 C3N-01419 LUAD WXS tissue_normal CPT0118060008 41fbeb7b-f0e1-4923-99d4-bf779f8459f2_wxs_gdc_realn.bam 26719876766 BAM NA bbd7996a-16de-44ee-b0d7-959819b02e9b f5a9790e8ff6a047f147b629581f2515 hg38 Solid Tissue Normal C3N-01419-06 additional_DNA ADNA_q19J5R Duplicate item: Additional DNA requested C3N-01419.WXS.N C3N-01419 LUAD WXS blood_normal CPT0119310002 CPT0119310002.WholeExome.RP-1303.bam 16352888808 BAM NA c8952583-d0ce-4cb1-a947-c99c70ec91f2 d22cf5eec473c592dcce2aa8a866233d hg19 Blood Derived Normal C3N-01419-75 C3N-01419.WXS.N.hg38 C3N-01419 LUAD WXS blood_normal CPT0119310002 8541ee06-47ca-4632-af45-dcf0ae9e50a2_wxs_gdc_realn.bam 22949472162 BAM NA 7bad8534-983e-4be5-95ac-1b2c6a264267 b7c07b191129f30704a47d9b93003305 hg38 Blood Derived Normal C3N-01419-75 C3N-01419.WXS.T C3N-01419 LUAD WXS tumor CPT0118040009 CPT0118040009.WholeExome.RP-1303.bam 22614668149 BAM NA 64662474-47f1-4aeb-8139-517018852172 61acffc16f8911b63f4e802823f55fdc hg19 Primary Tumor C3N-01419-03 @@ -22320,8 +22334,8 @@ C3N-01489.WXS.N C3N-01489 LUAD WXS blood_normal CPT0108270002 CPT0108270002.Whol C3N-01489.WXS.N.hg38 C3N-01489 LUAD WXS blood_normal CPT0108270002 109c49c2-5da7-479e-ae3e-2faf07ae9244_wxs_gdc_realn.bam 52853972717 BAM NA c5a6d394-659c-43cf-8b4f-e7d637d4430e 8c92834850224b4191d13c739688a5ed hg38 Blood Derived Normal C3N-01489-31,C3N-01489-71 C3N-01489.WXS.T C3N-01489 LUAD WXS tumor CPT0105940009 CPT0105940009.WholeExome.RP-1303.bam 26982320409 BAM NA f57b6c5a-2e3c-410f-b0ed-db06b57bb59c 23e643c40a6e93f0a5dab549e5dd04e0 hg19 Primary Tumor C3N-01489-02 C3N-01489.WXS.T.hg38 C3N-01489 LUAD WXS tumor CPT0105940009 430ae4b9-2dbc-4a3c-a397-2baf354b13a5_wxs_gdc_realn.bam 37205601233 BAM NA 78b86af9-8dec-45da-b00f-211f7ac8c5e2 7f6b6c008769818e6945592314369eca hg38 Primary Tumor C3N-01489-02 -C3N-01502.MethArray.Green.T C3N-01502 PDA Methylation Array tumor CPT0065570009 202184990052_R06C01_Grn.idat 13676226 IDAT Green 679f1d0f-c921-4325-b404-260a475ccc44 cf7581ce6f668c7e900511a5c235e58e NA Primary Tumor C3N-01502-01 -C3N-01502.MethArray.Red.T C3N-01502 PDA Methylation Array tumor CPT0065570009 202184990052_R06C01_Red.idat 13676226 IDAT Red 8a8e12dc-7e97-4f17-9755-17c6fe9285b0 df448cb5b05c10f815e3f7a2bdc6e4ea NA Primary Tumor C3N-01502-01 +C3N-01502.MethArray.Green.T.DEEP_rp63A6 C3N-01502 PDA Methylation Array tumor CPT0065570009 202184990052_R06C01_Grn.idat 13676226 IDAT Green 679f1d0f-c921-4325-b404-260a475ccc44 cf7581ce6f668c7e900511a5c235e58e NA Primary Tumor C3N-01502-01 deep_sequencing DEEP_rp63A6 Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01502.MethArray.Red.T.DEEP_rp63A6 C3N-01502 PDA Methylation Array tumor CPT0065570009 202184990052_R06C01_Red.idat 13676226 IDAT Red 8a8e12dc-7e97-4f17-9755-17c6fe9285b0 df448cb5b05c10f815e3f7a2bdc6e4ea NA Primary Tumor C3N-01502-01 deep_sequencing DEEP_rp63A6 Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01502.miRNA-Seq.T C3N-01502 PDA miRNA-Seq tumor CPT0065570006 181108_UNC31-K00269_0163_BH23TVBBXY_CTTGTA_S12_L001_R1_001.unaln.bam 224703888 BAM NA 3bb977cf-f8b0-4be3-8233-c7774353fe60 dc69d96706a1a44780fd220d710b00ab NA Primary Tumor C3N-01502-01 C3N-01502.miRNA-Seq.T.hg38 C3N-01502 PDA miRNA-Seq tumor CPT0065570006 a466c026-74d9-46b7-8163-46fabab9b1f9_mirnaseq_gdc_realn.bam 247185270 BAM NA 3085592d-cd8d-405e-81ef-b321df20e6eb 0e0ed0a4f10629229753eb6ec08c563e hg38 Primary Tumor C3N-01502-01 C3N-01502.RNA-Seq.chimeric.T.hg38 C3N-01502 PDA RNA-Seq tumor CPT0065570006 1f4cddf9-8376-4fc1-9320-8770b5b8177a.rna_seq.chimeric.gdc_realn.bam 25550755 BAM chimeric 1625f76c-e1f4-401e-9c09-f64a911ef9c0 52a6de445a8a12d76b18f5439a497aa0 hg38 Primary Tumor C3N-01502-01 @@ -22331,12 +22345,12 @@ C3N-01502.RNA-Seq.R2.T C3N-01502 PDA RNA-Seq tumor CPT0065570006 170828_UNC31-K0 C3N-01502.RNA-Seq.transcriptome.T.hg38 C3N-01502 PDA RNA-Seq tumor CPT0065570006 1f4cddf9-8376-4fc1-9320-8770b5b8177a.rna_seq.transcriptome.gdc_realn.bam 8750137661 BAM transcriptome 5e67d2a1-be37-48e6-bc84-35dea891f7f0 c4bc831510ff2b2addeceb8cea1a0e75 hg38 Primary Tumor C3N-01502-01 C3N-01502.WGS.N C3N-01502 PDA WGS blood_normal CPT0070700002 CPT0070700002.WholeGenome.RP-1303.bam 88534643472 BAM NA eec33d57-ffdc-4f56-9aa4-ce8276b7e49d 719b7b9b87a7fc4fc7c7271a71c8fb57 hg19 Blood Derived Normal C3N-01502-31 C3N-01502.WGS.N.hg38 C3N-01502 PDA WGS blood_normal CPT0070700002 90fad112-7ec0-43d1-9293-731150d95deb_gdc_realn.bam 132609636824 BAM NA 073dcaea-3c85-4618-b6a5-30fc9397ff6a 0726c5a5f38c354ef3ab4c40250925c7 hg38 Blood Derived Normal C3N-01502-31 -C3N-01502.WGS.T C3N-01502 PDA WGS tumor CPT0065570009 CPT0065570009.WholeGenome.RP-1303.bam 69797664919 BAM NA 73ae0bb6-13ae-496e-ab52-32bda494159f f72616c12ebbdd44350fbc382166e72b hg19 Primary Tumor C3N-01502-01 -C3N-01502.WGS.T.hg38 C3N-01502 PDA WGS tumor CPT0065570009 8c9b3147-4bf6-42f3-838e-b257eaa4b898_gdc_realn.bam 105875055640 BAM NA 18992ff2-d652-4450-a037-d477d50b7245 fe1a74f591597373c298bec74944d515 hg38 Primary Tumor C3N-01502-01 +C3N-01502.WGS.T.DEEP_rp63A6 C3N-01502 PDA WGS tumor CPT0065570009 CPT0065570009.WholeGenome.RP-1303.bam 69797664919 BAM NA 73ae0bb6-13ae-496e-ab52-32bda494159f f72616c12ebbdd44350fbc382166e72b hg19 Primary Tumor C3N-01502-01 deep_sequencing DEEP_rp63A6 Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01502.WGS.T.DEEP_rp63A6.hg38 C3N-01502 PDA WGS tumor CPT0065570009 8c9b3147-4bf6-42f3-838e-b257eaa4b898_gdc_realn.bam 105875055640 BAM NA 18992ff2-d652-4450-a037-d477d50b7245 fe1a74f591597373c298bec74944d515 hg38 Primary Tumor C3N-01502-01 deep_sequencing DEEP_rp63A6 Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01502.WXS.N C3N-01502 PDA WXS blood_normal CPT0070700002 CPT0070700002.WholeExome.RP-1303.bam 35569421100 BAM NA f12f1746-e8eb-4011-a0d8-160c7096cb99 99675bd94864513c8957757652c9d2c5 hg19 Blood Derived Normal C3N-01502-31 C3N-01502.WXS.N.hg38 C3N-01502 PDA WXS blood_normal CPT0070700002 90fad112-7ec0-43d1-9293-731150d95deb_gdc_realn.bam 48693181748 BAM NA dff9e346-18f3-43bb-9bc8-99f155d3e347 5dd0dddc4846edb63204f36c7600597b hg38 Blood Derived Normal C3N-01502-31 -C3N-01502.WXS.T C3N-01502 PDA WXS tumor CPT0065570009 CPT0065570009.WholeExome.RP-1303.bam 28394673755 BAM NA c76e8040-7565-4a8e-b160-b7efdf6d0daf 00d47d551c510efeca42923d3b0dcedb hg19 Primary Tumor C3N-01502-01 -C3N-01502.WXS.T.hg38 C3N-01502 PDA WXS tumor CPT0065570009 8c9b3147-4bf6-42f3-838e-b257eaa4b898_gdc_realn.bam 39091179857 BAM NA a87b3f34-3f83-4d33-9f2d-91a38f585471 c5641321d01bf84c3a4b706ad932ad93 hg38 Primary Tumor C3N-01502-01 +C3N-01502.WXS.T.DEEP_rp63A6 C3N-01502 PDA WXS tumor CPT0065570009 CPT0065570009.WholeExome.RP-1303.bam 28394673755 BAM NA c76e8040-7565-4a8e-b160-b7efdf6d0daf 00d47d551c510efeca42923d3b0dcedb hg19 Primary Tumor C3N-01502-01 deep_sequencing DEEP_rp63A6 Duplicate item: Additional DNA for PDA Deep Sequencing +C3N-01502.WXS.T.DEEP_rp63A6.hg38 C3N-01502 PDA WXS tumor CPT0065570009 8c9b3147-4bf6-42f3-838e-b257eaa4b898_gdc_realn.bam 39091179857 BAM NA a87b3f34-3f83-4d33-9f2d-91a38f585471 c5641321d01bf84c3a4b706ad932ad93 hg38 Primary Tumor C3N-01502-01 deep_sequencing DEEP_rp63A6 Duplicate item: Additional DNA for PDA Deep Sequencing C3N-01502.WXS.T.hg38.high_cov C3N-01502 PDA WXS tumor CPT0065570009_1 48f1b9b8-4725-4465-af3d-a86822eac545_wxs_gdc_realn.bam 77001496586 BAM NA 224879d2-8105-4028-a90e-615fab8c240c dfc4fa3524d61c8d52e65fdc8bb22980 hg38 Primary Tumor C3N-01502-01 .high_cov C3N-01502.WXS.T.high_cov C3N-01502 PDA WXS tumor CPT0065570009_1 CPT0065570009_1.WholeExome.RP-1303.bam 56101879612 BAM NA 96936d47-f852-4953-939c-9c565b6cff17 287bf9db2d3c1902caf58f045ddec45c hg19 Primary Tumor C3N-01502-01 .high_cov C3N-01505.MethArray.Green.T C3N-01505 GBM Methylation Array tumor CPT0089150009 202234360009_R04C01_Grn.idat 13676226 IDAT Green 9bbe8147-627f-4482-8958-ce67c5278244 7a07e7b54652a7c502d49b24ff613bb3 NA Primary Tumor C3N-01505-01 @@ -22382,12 +22396,12 @@ C3N-01515.RNA-Seq.genomic.T.hg38 C3N-01515 GBM RNA-Seq tumor CPT0079790006 3eca3 C3N-01515.RNA-Seq.R1.T C3N-01515 GBM RNA-Seq tumor CPT0079790006 171116_UNC31-K00269_0093_BHMFKJBBXX_TTAGGC_S16_L005_R1_001.fastq.gz 3931183389 FASTQ NA 4af57b23-c496-487d-868a-0c09c5e20ea4 05c5f57ec6e77ddd76aa065e78644ded NA Primary Tumor C3N-01515-01 C3N-01515.RNA-Seq.R2.T C3N-01515 GBM RNA-Seq tumor CPT0079790006 171116_UNC31-K00269_0093_BHMFKJBBXX_TTAGGC_S16_L005_R2_001.fastq.gz 4328111545 FASTQ NA da0a144a-f03c-46e9-b35c-14b0b1a9a40c caa2d2caddf4c1c504fd1d33fe897c44 NA Primary Tumor C3N-01515-01 C3N-01515.RNA-Seq.transcriptome.T.hg38 C3N-01515 GBM RNA-Seq tumor CPT0079790006 3eca3ff3-8621-4e8b-9a74-074e23c5f755.rna_seq.transcriptome.gdc_realn.bam 9024936082 BAM transcriptome 8ef0e5e7-ffa5-47c6-9419-11fc35721697 a2b8a2d9407ecb1bb4a963eed246db25 hg38 Primary Tumor C3N-01515-01 -C3N-01515.WGS.N C3N-01515 GBM WGS blood_normal CPT0080730002 CPT0080730002.WholeGenome.RP-1303.bam 52207974955 BAM NA 4755647c-2207-4dca-9a9c-6fe483da66c5 62cf6e91c8c5920e3fedb1104ffd56ea hg19 Blood Derived Normal C3N-01515-31 -C3N-01515.WGS.N.hg38 C3N-01515 GBM WGS blood_normal CPT0080730002 474dfea4-f2db-44d5-9f00-98c85f07f20b_wgs_gdc_realn.bam 75868489857 BAM NA f97f390b-0bb3-499c-b6bd-00b1afce849b 570f1f7691da38e20a6e166724b2d2ae hg38 Blood Derived Normal C3N-01515-31 +C3N-01515.WGS.N.ADNA_kPL1jE C3N-01515 GBM WGS blood_normal CPT0080730002 CPT0080730002.WholeGenome.RP-1303.bam 52207974955 BAM NA 4755647c-2207-4dca-9a9c-6fe483da66c5 62cf6e91c8c5920e3fedb1104ffd56ea hg19 Blood Derived Normal C3N-01515-31 additional_DNA ADNA_kPL1jE Duplicate item: Additional DNA requested +C3N-01515.WGS.N.ADNA_kPL1jE.hg38 C3N-01515 GBM WGS blood_normal CPT0080730002 474dfea4-f2db-44d5-9f00-98c85f07f20b_wgs_gdc_realn.bam 75868489857 BAM NA f97f390b-0bb3-499c-b6bd-00b1afce849b 570f1f7691da38e20a6e166724b2d2ae hg38 Blood Derived Normal C3N-01515-31 additional_DNA ADNA_kPL1jE Duplicate item: Additional DNA requested C3N-01515.WGS.T C3N-01515 GBM WGS tumor CPT0079790009 CPT0079790009.WholeGenome.RP-1303.bam 63947622118 BAM NA 26a06e1a-93b6-4f62-b833-c306df9a077c 7cc5fc877f9269f59fa0bbbbb0a73214 hg19 Primary Tumor C3N-01515-01 C3N-01515.WGS.T.hg38 C3N-01515 GBM WGS tumor CPT0079790009 d4205a17-5d31-4f86-9a43-4631df1263ab_wgs_gdc_realn.bam 94688322512 BAM NA 0a677c0b-d4b6-48c3-8cb1-f0450487c8e1 4c90eb6f9f960eed16b323e275fe1740 hg38 Primary Tumor C3N-01515-01 -C3N-01515.WXS.N C3N-01515 GBM WXS blood_normal CPT0080730002 CPT0080730002.WholeExome.RP-1303.bam 30433178668 BAM NA 3f2264d8-4724-47d2-8dce-5ffbfeacbc29 37e514e5469bb2d156dc320816fb2ee3 hg19 Blood Derived Normal C3N-01515-31 -C3N-01515.WXS.N.hg38 C3N-01515 GBM WXS blood_normal CPT0080730002 474dfea4-f2db-44d5-9f00-98c85f07f20b_wxs_gdc_realn.bam 40059433644 BAM NA 2150f839-57f4-4e89-b9b1-f4b36d3c2fc0 da921f20407a7a848f6430d97d1f8d77 hg38 Blood Derived Normal C3N-01515-31 +C3N-01515.WXS.N.ADNA_kPL1jE C3N-01515 GBM WXS blood_normal CPT0080730002 CPT0080730002.WholeExome.RP-1303.bam 30433178668 BAM NA 3f2264d8-4724-47d2-8dce-5ffbfeacbc29 37e514e5469bb2d156dc320816fb2ee3 hg19 Blood Derived Normal C3N-01515-31 additional_DNA ADNA_kPL1jE Duplicate item: Additional DNA requested +C3N-01515.WXS.N.ADNA_kPL1jE.hg38 C3N-01515 GBM WXS blood_normal CPT0080730002 474dfea4-f2db-44d5-9f00-98c85f07f20b_wxs_gdc_realn.bam 40059433644 BAM NA 2150f839-57f4-4e89-b9b1-f4b36d3c2fc0 da921f20407a7a848f6430d97d1f8d77 hg38 Blood Derived Normal C3N-01515-31 additional_DNA ADNA_kPL1jE Duplicate item: Additional DNA requested C3N-01515.WXS.T C3N-01515 GBM WXS tumor CPT0079790009 CPT0079790009.WholeExome.RP-1303.bam 37935476804 BAM NA 6711ebe4-8aee-4b9a-9343-8b808ef2f55d b6d586f872d217c8ad45422c1326927a hg19 Primary Tumor C3N-01515-01 C3N-01515.WXS.T.hg38 C3N-01515 GBM WXS tumor CPT0079790009 d4205a17-5d31-4f86-9a43-4631df1263ab_wxs_gdc_realn.bam 51761332459 BAM NA 74431fbe-41f7-4514-9329-88da5c09fdd1 b75e51a3df40e9f64aa2456ae9327d0a hg38 Primary Tumor C3N-01515-01 C3N-01517.MethArray.Green.T C3N-01517 GBM Methylation Array tumor CPT0167530006 203028200048_R07C01_Grn.idat 13676229 IDAT Green ee436dcb-2bd8-4739-9406-a7d2bee4b7ef 4446dd74d586776bcaa254f81326e76e NA Primary Tumor C3N-01517-01 @@ -22591,64 +22605,64 @@ C3N-01525.miRNA-Seq.A.hg38 C3N-01525 UCEC miRNA-Seq tissue_normal CPT0095900009 C3N-01525.miRNA-Seq.T C3N-01525 UCEC miRNA-Seq tumor CPT0095880006 181108_UNC31-K00269_0163_BH23TVBBXY_GTTTCG_S21_L008_R1_001.unaln.bam 203340092 BAM NA 03688d58-6cf8-4e67-8f32-63265f9878ec d42a1f8f53b7f5d6d862804a9f5d46b9 NA Primary Tumor C3N-01525-02 C3N-01525.miRNA-Seq.T.hg38 C3N-01525 UCEC miRNA-Seq tumor CPT0095880006 b8288b74-d636-485b-ace0-684bc83b8175_mirnaseq_gdc_realn.bam 225028917 BAM NA 1726a0d7-0c4b-4f15-9d7c-372edf2e73d8 9134e53d4901af10d5919e1acf909a8d hg38 Primary Tumor C3N-01525-02 C3N-01525.RNA-Seq.chimeric.A.hg38 C3N-01525 UCEC RNA-Seq tissue_normal CPT0095900009 1006d140-1743-453c-93ed-61d868f68808.rna_seq.chimeric.gdc_realn.bam 31325402 BAM chimeric 914726b6-7205-476c-9b2c-3d8f0d7578d8 4d13a4574913bd9185931a13f7b8a443 hg38 Solid Tissue Normal C3N-01525-06 -C3N-01525.RNA-Seq.chimeric.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095870043 ead1bfc9-3bd1-4820-a632-fae0047f3094.rna_seq.chimeric.gdc_realn.bam 90015700 BAM chimeric e86bb499-3378-4672-8829-52f03b93058a e3eb01bbbbbf5f629c6a9f16f82607a4 hg38 Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.chimeric.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095870046 2286c6b4-f478-4013-8871-a242ff886cc4.rna_seq.chimeric.gdc_realn.bam 129832391 BAM chimeric 660991bd-69a8-4916-8ed2-0111dc1513f8 b4541244afb2786e368e40cd78a95a52 hg38 Primary Tumor C3N-01525-02 +C3N-01525.RNA-Seq.chimeric.T.heterogeneity.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095870043 ead1bfc9-3bd1-4820-a632-fae0047f3094.rna_seq.chimeric.gdc_realn.bam 90015700 BAM chimeric e86bb499-3378-4672-8829-52f03b93058a e3eb01bbbbbf5f629c6a9f16f82607a4 hg38 Primary Tumor C3N-01525-02 LMD heterogeneity LMD_0jjykN Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.chimeric.T.heterogeneity.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095870046 2286c6b4-f478-4013-8871-a242ff886cc4.rna_seq.chimeric.gdc_realn.bam 129832391 BAM chimeric 660991bd-69a8-4916-8ed2-0111dc1513f8 b4541244afb2786e368e40cd78a95a52 hg38 Primary Tumor C3N-01525-02 LMD heterogeneity LMD_kWWVnv Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.chimeric.T.heterogeneity.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890059 c27ee608-ae67-4e00-b08a-d7c24ef7a41b.rna_seq.chimeric.gdc_realn.bam 144252981 BAM chimeric 0d6d51aa-d592-419f-8d98-a0e2665b5a5f 3df1333814037a0711643596d27d712e hg38 Primary Tumor C3N-01525-02 LMD heterogeneity LMD_AEEkjl Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.chimeric.T.heterogeneity.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890062 38ea6bdf-208c-4388-a828-74ddbca9ceeb.rna_seq.chimeric.gdc_realn.bam 151535952 BAM chimeric 8d80b4ae-b27f-4b52-922f-0808636de385 832783ee9ddb0c12ea8b2588b858af78 hg38 Primary Tumor C3N-01525-02 LMD heterogeneity LMD_ELLorg Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.chimeric.T.heterogeneity.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890065 92f35e98-dd14-4024-8a1b-e50cc2a5a775.rna_seq.chimeric.gdc_realn.bam 186736711 BAM chimeric 81a4c6be-beb5-4f89-b227-61a8b42de82b 79f307e02179866dfe508c1fb75c2e44 hg38 Primary Tumor C3N-01525-02 LMD heterogeneity LMD_KllxKx Duplicate item: UCEC LMD Heterogeneity Pilot C3N-01525.RNA-Seq.chimeric.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095880006 8866d877-b81d-4001-928c-50fc0357b4a5.rna_seq.chimeric.gdc_realn.bam 72001080 BAM chimeric 36a9fc7d-519b-467d-9d60-b3e9ab128311 d1796ae7edb4648ab5edea8272b6541f hg38 Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.chimeric.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890059 c27ee608-ae67-4e00-b08a-d7c24ef7a41b.rna_seq.chimeric.gdc_realn.bam 144252981 BAM chimeric 0d6d51aa-d592-419f-8d98-a0e2665b5a5f 3df1333814037a0711643596d27d712e hg38 Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.chimeric.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890062 38ea6bdf-208c-4388-a828-74ddbca9ceeb.rna_seq.chimeric.gdc_realn.bam 151535952 BAM chimeric 8d80b4ae-b27f-4b52-922f-0808636de385 832783ee9ddb0c12ea8b2588b858af78 hg38 Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.chimeric.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890065 92f35e98-dd14-4024-8a1b-e50cc2a5a775.rna_seq.chimeric.gdc_realn.bam 186736711 BAM chimeric 81a4c6be-beb5-4f89-b227-61a8b42de82b 79f307e02179866dfe508c1fb75c2e44 hg38 Primary Tumor C3N-01525-02 C3N-01525.RNA-Seq.genomic.A.hg38 C3N-01525 UCEC RNA-Seq tissue_normal CPT0095900009 1006d140-1743-453c-93ed-61d868f68808.rna_seq.genomic.gdc_realn.bam 9243575563 BAM genomic dbba5ada-9a0f-47a2-b001-08cc3f526b9f 755aa8f34184785866d8087e20ac1d3b hg38 Solid Tissue Normal C3N-01525-06 -C3N-01525.RNA-Seq.genomic.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095870043 ead1bfc9-3bd1-4820-a632-fae0047f3094.rna_seq.genomic.gdc_realn.bam 8718580467 BAM genomic f9466127-30ea-49ef-8095-f5a8edfb904b 91e0a8119f3ce5dadd03f8eb41fae04a hg38 Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.genomic.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095870046 2286c6b4-f478-4013-8871-a242ff886cc4.rna_seq.genomic.gdc_realn.bam 8732479053 BAM genomic 05941dee-6f23-457b-be00-894b54c29213 76c81fb1727c8fd8bc6f31cfcd615b03 hg38 Primary Tumor C3N-01525-02 +C3N-01525.RNA-Seq.genomic.T.heterogeneity.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095870043 ead1bfc9-3bd1-4820-a632-fae0047f3094.rna_seq.genomic.gdc_realn.bam 8718580467 BAM genomic f9466127-30ea-49ef-8095-f5a8edfb904b 91e0a8119f3ce5dadd03f8eb41fae04a hg38 Primary Tumor C3N-01525-02 LMD heterogeneity LMD_0jjykN Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.genomic.T.heterogeneity.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095870046 2286c6b4-f478-4013-8871-a242ff886cc4.rna_seq.genomic.gdc_realn.bam 8732479053 BAM genomic 05941dee-6f23-457b-be00-894b54c29213 76c81fb1727c8fd8bc6f31cfcd615b03 hg38 Primary Tumor C3N-01525-02 LMD heterogeneity LMD_kWWVnv Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.genomic.T.heterogeneity.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890059 c27ee608-ae67-4e00-b08a-d7c24ef7a41b.rna_seq.genomic.gdc_realn.bam 8798379510 BAM genomic 7687c50c-1c2c-4d36-a432-754213f0524e 736695652af4aee8a5a6f2de8b0737a1 hg38 Primary Tumor C3N-01525-02 LMD heterogeneity LMD_AEEkjl Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.genomic.T.heterogeneity.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890062 38ea6bdf-208c-4388-a828-74ddbca9ceeb.rna_seq.genomic.gdc_realn.bam 9006004323 BAM genomic 0230e27d-7bca-4a63-ae2c-e834c2f0a523 b79bfd6423f3b5a57ceaeb954e294c95 hg38 Primary Tumor C3N-01525-02 LMD heterogeneity LMD_ELLorg Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.genomic.T.heterogeneity.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890065 92f35e98-dd14-4024-8a1b-e50cc2a5a775.rna_seq.genomic.gdc_realn.bam 7430879927 BAM genomic af35212f-41b8-454d-888f-eca9b052e41a ccb9028f0387949618ab904f0afeeb9c hg38 Primary Tumor C3N-01525-02 LMD heterogeneity LMD_KllxKx Duplicate item: UCEC LMD Heterogeneity Pilot C3N-01525.RNA-Seq.genomic.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095880006 8866d877-b81d-4001-928c-50fc0357b4a5.rna_seq.genomic.gdc_realn.bam 8610630118 BAM genomic 47b66db8-0be8-4610-a30d-ec9e9ea8c145 01e38513d948092fd2f5342002d2050a hg38 Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.genomic.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890059 c27ee608-ae67-4e00-b08a-d7c24ef7a41b.rna_seq.genomic.gdc_realn.bam 8798379510 BAM genomic 7687c50c-1c2c-4d36-a432-754213f0524e 736695652af4aee8a5a6f2de8b0737a1 hg38 Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.genomic.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890062 38ea6bdf-208c-4388-a828-74ddbca9ceeb.rna_seq.genomic.gdc_realn.bam 9006004323 BAM genomic 0230e27d-7bca-4a63-ae2c-e834c2f0a523 b79bfd6423f3b5a57ceaeb954e294c95 hg38 Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.genomic.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890065 92f35e98-dd14-4024-8a1b-e50cc2a5a775.rna_seq.genomic.gdc_realn.bam 7430879927 BAM genomic af35212f-41b8-454d-888f-eca9b052e41a ccb9028f0387949618ab904f0afeeb9c hg38 Primary Tumor C3N-01525-02 C3N-01525.RNA-Seq.R1.A C3N-01525 UCEC RNA-Seq tissue_normal CPT0095900009 180606_UNC32-K00270_0097_AHVCKFBBXX_CTTGTA_S27_L007_R1_001.fastq.gz 3801524004 FASTQ NA 60d4d2d6-e06e-4e47-8114-072fabb42fd6 622598c17fbf66de8eece500c710a54a NA Solid Tissue Normal C3N-01525-06 -C3N-01525.RNA-Seq.R1.T C3N-01525 UCEC RNA-Seq tumor CPT0095870043 200212_UNC31-K00269_0265_BHGCWGBBXY_CTCACCAA-CTAGGCAA_S6_L002_R1_001.fastq.gz 3585068661 FASTQ NA 4adddeac-120c-4141-a6f4-b05e33665f70 43ff86c137d00a9976e28006b10bd981 NA Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.R1.T C3N-01525 UCEC RNA-Seq tumor CPT0095870046 200212_UNC31-K00269_0265_BHGCWGBBXY_TCTGTTGG-TCGAATGG_S7_L002_R1_001.fastq.gz 3529331134 FASTQ NA 9fa3175c-9bb4-4dda-adba-95a01bf8173e c45541178d2f3a18221bf30166a28fde NA Primary Tumor C3N-01525-02 C3N-01525.RNA-Seq.R1.T C3N-01525 UCEC RNA-Seq tumor CPT0095880006 171107_UNC32-K00270_0063_BHLNTCBBXX_TTAGGC_S63_L008_R1_001.fastq.gz 3760186423 FASTQ NA ea3cf705-6b2f-4777-8911-7348e171ab00 282045f8c42e0c03ee2cf1e99f72dc34 NA Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.R1.T C3N-01525 UCEC RNA-Seq tumor CPT0095890059 200212_UNC31-K00269_0265_BHGCWGBBXY_AACTGTAG-ACGCCGCA_S8_L003_R1_001.fastq.gz 3907360321 FASTQ NA 1e3ad2be-2624-4e61-b8c3-931c8dca073b 1ec1d3c5e1b433299c606c8d220ce065 NA Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.R1.T C3N-01525 UCEC RNA-Seq tumor CPT0095890062 200212_UNC31-K00269_0265_BHGCWGBBXY_GGTCACGA-GTATTATG_S9_L003_R1_001.fastq.gz 3712958149 FASTQ NA 3b7b0a34-b123-419b-9ac2-5565acc07871 0ef021b0c079535ff65e8030a5122111 NA Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.R1.T C3N-01525 UCEC RNA-Seq tumor CPT0095890065 200212_UNC31-K00269_0265_BHGCWGBBXY_CTGCTTCC-GATAGATC_S10_L003_R1_001.fastq.gz 3146864941 FASTQ NA 45bb7f89-e151-4eda-a814-544c0fd0549c 4ee7e01c9957485e2b20c597eb1cdcbf NA Primary Tumor C3N-01525-02 +C3N-01525.RNA-Seq.R1.T.heterogeneity C3N-01525 UCEC RNA-Seq tumor CPT0095870043 200212_UNC31-K00269_0265_BHGCWGBBXY_CTCACCAA-CTAGGCAA_S6_L002_R1_001.fastq.gz 3585068661 FASTQ NA 4adddeac-120c-4141-a6f4-b05e33665f70 43ff86c137d00a9976e28006b10bd981 NA Primary Tumor C3N-01525-02 LMD heterogeneity LMD_0jjykN Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.R1.T.heterogeneity C3N-01525 UCEC RNA-Seq tumor CPT0095870046 200212_UNC31-K00269_0265_BHGCWGBBXY_TCTGTTGG-TCGAATGG_S7_L002_R1_001.fastq.gz 3529331134 FASTQ NA 9fa3175c-9bb4-4dda-adba-95a01bf8173e c45541178d2f3a18221bf30166a28fde NA Primary Tumor C3N-01525-02 LMD heterogeneity LMD_kWWVnv Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.R1.T.heterogeneity C3N-01525 UCEC RNA-Seq tumor CPT0095890059 200212_UNC31-K00269_0265_BHGCWGBBXY_AACTGTAG-ACGCCGCA_S8_L003_R1_001.fastq.gz 3907360321 FASTQ NA 1e3ad2be-2624-4e61-b8c3-931c8dca073b 1ec1d3c5e1b433299c606c8d220ce065 NA Primary Tumor C3N-01525-02 LMD heterogeneity LMD_AEEkjl Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.R1.T.heterogeneity C3N-01525 UCEC RNA-Seq tumor CPT0095890062 200212_UNC31-K00269_0265_BHGCWGBBXY_GGTCACGA-GTATTATG_S9_L003_R1_001.fastq.gz 3712958149 FASTQ NA 3b7b0a34-b123-419b-9ac2-5565acc07871 0ef021b0c079535ff65e8030a5122111 NA Primary Tumor C3N-01525-02 LMD heterogeneity LMD_ELLorg Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.R1.T.heterogeneity C3N-01525 UCEC RNA-Seq tumor CPT0095890065 200212_UNC31-K00269_0265_BHGCWGBBXY_CTGCTTCC-GATAGATC_S10_L003_R1_001.fastq.gz 3146864941 FASTQ NA 45bb7f89-e151-4eda-a814-544c0fd0549c 4ee7e01c9957485e2b20c597eb1cdcbf NA Primary Tumor C3N-01525-02 LMD heterogeneity LMD_KllxKx Duplicate item: UCEC LMD Heterogeneity Pilot C3N-01525.RNA-Seq.R2.A C3N-01525 UCEC RNA-Seq tissue_normal CPT0095900009 180606_UNC32-K00270_0097_AHVCKFBBXX_CTTGTA_S27_L007_R2_001.fastq.gz 4006838452 FASTQ NA b1878470-eeb5-4cd8-b802-ee18ced97730 29d47df9f015f40fd11c32faebba4bb7 NA Solid Tissue Normal C3N-01525-06 -C3N-01525.RNA-Seq.R2.T C3N-01525 UCEC RNA-Seq tumor CPT0095870043 200212_UNC31-K00269_0265_BHGCWGBBXY_CTCACCAA-CTAGGCAA_S6_L002_R2_001.fastq.gz 3987437061 FASTQ NA 75a7a693-b6db-4d1a-8ac8-878278053533 d42865f60f98c1d600ef8cf7901f82ed NA Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.R2.T C3N-01525 UCEC RNA-Seq tumor CPT0095870046 200212_UNC31-K00269_0265_BHGCWGBBXY_TCTGTTGG-TCGAATGG_S7_L002_R2_001.fastq.gz 3841105305 FASTQ NA 77fc7ff3-05e0-4893-a795-e691b77d746b 7139602946c1f6f8e2c8b25331ddf375 NA Primary Tumor C3N-01525-02 C3N-01525.RNA-Seq.R2.T C3N-01525 UCEC RNA-Seq tumor CPT0095880006 171107_UNC32-K00270_0063_BHLNTCBBXX_TTAGGC_S63_L008_R2_001.fastq.gz 4053079023 FASTQ NA 8a9c0d57-959d-4c5f-b922-750d72b0c8d5 17fe8b43bc6e8bcdad8c1aa45b3f9d0c NA Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.R2.T C3N-01525 UCEC RNA-Seq tumor CPT0095890059 200212_UNC31-K00269_0265_BHGCWGBBXY_AACTGTAG-ACGCCGCA_S8_L003_R2_001.fastq.gz 4336799956 FASTQ NA 8e95d8e9-59b6-4d1a-9210-4056896e3e03 49da2981cbca809be2e8adeba7a0c92a NA Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.R2.T C3N-01525 UCEC RNA-Seq tumor CPT0095890062 200212_UNC31-K00269_0265_BHGCWGBBXY_GGTCACGA-GTATTATG_S9_L003_R2_001.fastq.gz 4058507606 FASTQ NA f2551767-5466-4543-8dca-29bd5fac5227 558414e7a2f826d7588fedd4604f4e42 NA Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.R2.T C3N-01525 UCEC RNA-Seq tumor CPT0095890065 200212_UNC31-K00269_0265_BHGCWGBBXY_CTGCTTCC-GATAGATC_S10_L003_R2_001.fastq.gz 3493627102 FASTQ NA 795da625-4686-4f20-ba6c-313b56083ebc dcad7c01e5ea17fb65435c4a516ce422 NA Primary Tumor C3N-01525-02 +C3N-01525.RNA-Seq.R2.T.heterogeneity C3N-01525 UCEC RNA-Seq tumor CPT0095870043 200212_UNC31-K00269_0265_BHGCWGBBXY_CTCACCAA-CTAGGCAA_S6_L002_R2_001.fastq.gz 3987437061 FASTQ NA 75a7a693-b6db-4d1a-8ac8-878278053533 d42865f60f98c1d600ef8cf7901f82ed NA Primary Tumor C3N-01525-02 LMD heterogeneity LMD_0jjykN Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.R2.T.heterogeneity C3N-01525 UCEC RNA-Seq tumor CPT0095870046 200212_UNC31-K00269_0265_BHGCWGBBXY_TCTGTTGG-TCGAATGG_S7_L002_R2_001.fastq.gz 3841105305 FASTQ NA 77fc7ff3-05e0-4893-a795-e691b77d746b 7139602946c1f6f8e2c8b25331ddf375 NA Primary Tumor C3N-01525-02 LMD heterogeneity LMD_kWWVnv Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.R2.T.heterogeneity C3N-01525 UCEC RNA-Seq tumor CPT0095890059 200212_UNC31-K00269_0265_BHGCWGBBXY_AACTGTAG-ACGCCGCA_S8_L003_R2_001.fastq.gz 4336799956 FASTQ NA 8e95d8e9-59b6-4d1a-9210-4056896e3e03 49da2981cbca809be2e8adeba7a0c92a NA Primary Tumor C3N-01525-02 LMD heterogeneity LMD_AEEkjl Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.R2.T.heterogeneity C3N-01525 UCEC RNA-Seq tumor CPT0095890062 200212_UNC31-K00269_0265_BHGCWGBBXY_GGTCACGA-GTATTATG_S9_L003_R2_001.fastq.gz 4058507606 FASTQ NA f2551767-5466-4543-8dca-29bd5fac5227 558414e7a2f826d7588fedd4604f4e42 NA Primary Tumor C3N-01525-02 LMD heterogeneity LMD_ELLorg Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.R2.T.heterogeneity C3N-01525 UCEC RNA-Seq tumor CPT0095890065 200212_UNC31-K00269_0265_BHGCWGBBXY_CTGCTTCC-GATAGATC_S10_L003_R2_001.fastq.gz 3493627102 FASTQ NA 795da625-4686-4f20-ba6c-313b56083ebc dcad7c01e5ea17fb65435c4a516ce422 NA Primary Tumor C3N-01525-02 LMD heterogeneity LMD_KllxKx Duplicate item: UCEC LMD Heterogeneity Pilot C3N-01525.RNA-Seq.transcriptome.A.hg38 C3N-01525 UCEC RNA-Seq tissue_normal CPT0095900009 1006d140-1743-453c-93ed-61d868f68808.rna_seq.transcriptome.gdc_realn.bam 9597829501 BAM transcriptome 94c1726e-5cff-40e7-9f2b-a39144ca5f93 81c56e398f800bf6896429c3575db45e hg38 Solid Tissue Normal C3N-01525-06 -C3N-01525.RNA-Seq.transcriptome.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095870043 ead1bfc9-3bd1-4820-a632-fae0047f3094.rna_seq.transcriptome.gdc_realn.bam 4426506282 BAM transcriptome c2f2d44a-2139-46c3-b58c-15524aee5f08 1b89ded0709f8555468bf09f48c46763 hg38 Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.transcriptome.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095870046 2286c6b4-f478-4013-8871-a242ff886cc4.rna_seq.transcriptome.gdc_realn.bam 2409492349 BAM transcriptome 3fd8d9db-1bf4-4371-aeef-f66735976384 2b023c43db465e8e74f8b670936d00c4 hg38 Primary Tumor C3N-01525-02 +C3N-01525.RNA-Seq.transcriptome.T.heterogeneity.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095870043 ead1bfc9-3bd1-4820-a632-fae0047f3094.rna_seq.transcriptome.gdc_realn.bam 4426506282 BAM transcriptome c2f2d44a-2139-46c3-b58c-15524aee5f08 1b89ded0709f8555468bf09f48c46763 hg38 Primary Tumor C3N-01525-02 LMD heterogeneity LMD_0jjykN Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.transcriptome.T.heterogeneity.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095870046 2286c6b4-f478-4013-8871-a242ff886cc4.rna_seq.transcriptome.gdc_realn.bam 2409492349 BAM transcriptome 3fd8d9db-1bf4-4371-aeef-f66735976384 2b023c43db465e8e74f8b670936d00c4 hg38 Primary Tumor C3N-01525-02 LMD heterogeneity LMD_kWWVnv Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.transcriptome.T.heterogeneity.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890059 c27ee608-ae67-4e00-b08a-d7c24ef7a41b.rna_seq.transcriptome.gdc_realn.bam 6346061612 BAM transcriptome e8d0a05d-b075-4991-973a-f0863a210e0c 7577d141552a895007b15647d28aeba0 hg38 Primary Tumor C3N-01525-02 LMD heterogeneity LMD_AEEkjl Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.transcriptome.T.heterogeneity.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890062 38ea6bdf-208c-4388-a828-74ddbca9ceeb.rna_seq.transcriptome.gdc_realn.bam 4623853295 BAM transcriptome a6b22aae-f021-4b87-b294-921cb56c2723 a1beb09e73e1d4ce85b3107a6e219ba2 hg38 Primary Tumor C3N-01525-02 LMD heterogeneity LMD_ELLorg Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.RNA-Seq.transcriptome.T.heterogeneity.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890065 92f35e98-dd14-4024-8a1b-e50cc2a5a775.rna_seq.transcriptome.gdc_realn.bam 5078383099 BAM transcriptome 7f0ad123-01ac-4d85-9d27-fd7fc0ddae46 61891423d08f2846d3bd8465d6960e5f hg38 Primary Tumor C3N-01525-02 LMD heterogeneity LMD_KllxKx Duplicate item: UCEC LMD Heterogeneity Pilot C3N-01525.RNA-Seq.transcriptome.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095880006 8866d877-b81d-4001-928c-50fc0357b4a5.rna_seq.transcriptome.gdc_realn.bam 7481214700 BAM transcriptome 3152354c-9991-43ac-8d41-8fb5cb5e4ae7 f1532e129c4ac6f6eabe57e843f172b5 hg38 Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.transcriptome.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890059 c27ee608-ae67-4e00-b08a-d7c24ef7a41b.rna_seq.transcriptome.gdc_realn.bam 6346061612 BAM transcriptome e8d0a05d-b075-4991-973a-f0863a210e0c 7577d141552a895007b15647d28aeba0 hg38 Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.transcriptome.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890062 38ea6bdf-208c-4388-a828-74ddbca9ceeb.rna_seq.transcriptome.gdc_realn.bam 4623853295 BAM transcriptome a6b22aae-f021-4b87-b294-921cb56c2723 a1beb09e73e1d4ce85b3107a6e219ba2 hg38 Primary Tumor C3N-01525-02 -C3N-01525.RNA-Seq.transcriptome.T.hg38 C3N-01525 UCEC RNA-Seq tumor CPT0095890065 92f35e98-dd14-4024-8a1b-e50cc2a5a775.rna_seq.transcriptome.gdc_realn.bam 5078383099 BAM transcriptome 7f0ad123-01ac-4d85-9d27-fd7fc0ddae46 61891423d08f2846d3bd8465d6960e5f hg38 Primary Tumor C3N-01525-02 C3N-01525.WGS.A C3N-01525 UCEC WGS tissue_normal CPT0095900006 CPT0095900006.WholeGenome.RP-1303.bam 66675489743 BAM NA 6fb78171-6661-48a1-b884-0dd47659cc23 7121cd62b1244f18f7e24b362ad41a8a hg19 Solid Tissue Normal C3N-01525-06 C3N-01525.WGS.A.hg38 C3N-01525 UCEC WGS tissue_normal CPT0095900006 6636828c-15a6-483d-ade1-0d697874131a_wgs_gdc_realn.bam 98443324645 BAM NA d282953d-5e60-457c-966c-f6233255e43f 37eeae0780cdba41710668339661f68a hg38 Solid Tissue Normal C3N-01525-06 C3N-01525.WGS.N C3N-01525 UCEC WGS blood_normal CPT0095910002 CPT0095910002.WholeGenome.RP-1303.bam 69965816220 BAM NA afd2f3d9-9105-40f1-8fd0-0e1ed412a2bb 9b937f0790777358f13d69ad9f580460 hg19 Blood Derived Normal C3N-01525-31,C3N-01525-71 C3N-01525.WGS.N.hg38 C3N-01525 UCEC WGS blood_normal CPT0095910002 983de87d-c165-48e5-963d-970fad538bf7_wgs_gdc_realn.bam 103028139543 BAM NA a12a0859-002e-47f5-869f-240c8964517c 04900f45832d9325314df04e60b3bca6 hg38 Blood Derived Normal C3N-01525-31,C3N-01525-71 C3N-01525.WGS.T C3N-01525 UCEC WGS tumor CPT0095880009 CPT0095880009.WholeGenome.RP-1303.bam 75189427081 BAM NA c42cf6df-dd58-424b-b429-cd07fdf062bf 4defae3ef6f7a703d7f75c4a08e721a9 hg19 Primary Tumor C3N-01525-02 -C3N-01525.WGS.T C3N-01525 UCEC WGS tumor CPT0095890070 CPT0095890070.WholeGenome.RP-2158.bam 28398963253 BAM NA 09d8902f-682a-4991-b0e1-621ec52bed2e 8bf2fd7f96ff96d49ded6e35d3fba41d hg19 Primary Tumor C3N-01525-03 -C3N-01525.WGS.T C3N-01525 UCEC WGS tumor CPT0095890074 CPT0095890074.WholeGenome.RP-2158.bam 31754941052 BAM NA ee144f84-bd39-4d5a-a407-98418cc058cf cd229273c086d815d193408b4758e539 hg19 Primary Tumor C3N-01525-03 -C3N-01525.WGS.T C3N-01525 UCEC WGS tumor CPT0095890077 CPT0095890077.WholeGenome.RP-2158.bam 36327290039 BAM NA 32ca4cbb-4449-44fe-b140-ab93a8f124a3 1cedb0cda2516f11945ea45a8ec64ce6 hg19 Primary Tumor C3N-01525-03 +C3N-01525.WGS.T.heterogeneity C3N-01525 UCEC WGS tumor CPT0095890070 CPT0095890070.WholeGenome.RP-2158.bam 28398963253 BAM NA 09d8902f-682a-4991-b0e1-621ec52bed2e 8bf2fd7f96ff96d49ded6e35d3fba41d hg19 Primary Tumor C3N-01525-03 LMD heterogeneity LMD_PqqDX4 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.WGS.T.heterogeneity C3N-01525 UCEC WGS tumor CPT0095890074 CPT0095890074.WholeGenome.RP-2158.bam 31754941052 BAM NA ee144f84-bd39-4d5a-a407-98418cc058cf cd229273c086d815d193408b4758e539 hg19 Primary Tumor C3N-01525-03 LMD heterogeneity LMD_WAANkx Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.WGS.T.heterogeneity C3N-01525 UCEC WGS tumor CPT0095890077 CPT0095890077.WholeGenome.RP-2158.bam 36327290039 BAM NA 32ca4cbb-4449-44fe-b140-ab93a8f124a3 1cedb0cda2516f11945ea45a8ec64ce6 hg19 Primary Tumor C3N-01525-03 LMD heterogeneity LMD_ZEEQq5 Duplicate item: UCEC LMD Heterogeneity Pilot C3N-01525.WGS.T.hg38 C3N-01525 UCEC WGS tumor CPT0095880009 8f21acac-0d82-485f-8eb5-072a6e2a866b_wgs_gdc_realn.bam 108433341840 BAM NA 20b38ee9-5582-478e-8305-db960a2f88e7 1326e0c18d19d8fa5a91e7cf57908773 hg38 Primary Tumor C3N-01525-02 C3N-01525.WXS.A C3N-01525 UCEC WXS tissue_normal CPT0095900006 CPT0095900006.WholeExome.RP-1303.bam 30231434427 BAM NA aee8b25f-05d7-4c3b-a4ab-5d4568d05b85 12f20d850c5384ad4cd1ca807d29827d hg19 Solid Tissue Normal C3N-01525-06 C3N-01525.WXS.A.hg38 C3N-01525 UCEC WXS tissue_normal CPT0095900006 6636828c-15a6-483d-ade1-0d697874131a_wxs_gdc_realn.bam 40245771429 BAM NA 7c2c92e2-d2b0-4f69-963e-ae300f46ba45 f1143a04ac84c371d41acb0d96864609 hg38 Solid Tissue Normal C3N-01525-06 C3N-01525.WXS.N C3N-01525 UCEC WXS blood_normal CPT0095910002 CPT0095910002.WholeExome.RP-1303.bam 26561618983 BAM NA f5c4cc58-63fd-472e-ac7f-fe2814242bda a0b7363e288464b0ee2bac0ced45ea0c hg19 Blood Derived Normal C3N-01525-31,C3N-01525-71 C3N-01525.WXS.N.hg38 C3N-01525 UCEC WXS blood_normal CPT0095910002 983de87d-c165-48e5-963d-970fad538bf7_wxs_gdc_realn.bam 36184960828 BAM NA 54e3c9e5-a839-4c25-85ef-9520c184c0da eda17b99583a2c47fb4d386a73ac8845 hg38 Blood Derived Normal C3N-01525-31,C3N-01525-71 -C3N-01525.WXS.T C3N-01525 UCEC WXS tumor CPT0095870049 CPT0095870049.WholeExome.RP-1303.bam 19488129987 BAM NA f6e72ede-837f-4ff3-9575-2e558fdfafd9 183679f6252b26d9ab6b01f268b309fb hg19 Primary Tumor C3N-01525-01 -C3N-01525.WXS.T C3N-01525 UCEC WXS tumor CPT0095870051 CPT0095870051.WholeExome.RP-1303.bam 17019942693 BAM NA c2522a71-9fa1-4d64-84dc-be9f1b1b85cd d8424ac307da1b61b4f3379e8e91dfbf hg19 Primary Tumor C3N-01525-01 -C3N-01525.WXS.T C3N-01525 UCEC WXS tumor CPT0095870052 CPT0095870052.WholeExome.RP-1303.bam 21791915492 BAM NA 415658f6-8f36-4d3d-9990-7fe5a7167635 d961308def9c767931fac91e5fbf0f3e hg19 Primary Tumor C3N-01525-01 -C3N-01525.WXS.T C3N-01525 UCEC WXS tumor CPT0095870053 CPT0095870053.WholeExome.RP-1303.bam 16912365183 BAM NA 0b5550f1-4829-487d-8cb3-bbf13008dc5b dea42f64c6cb77ce4850831f539ada21 hg19 Primary Tumor C3N-01525-01 C3N-01525.WXS.T C3N-01525 UCEC WXS tumor CPT0095880009 CPT0095880009.WholeExome.RP-1303.bam 37250048620 BAM NA 27f969ab-576c-48aa-b395-e97da4be6de3 b199366010083a4d8692b41a45dd90e3 hg19 Primary Tumor C3N-01525-02 -C3N-01525.WXS.T C3N-01525 UCEC WXS tumor CPT0095890070 CPT0095890070.WholeExome.RP-1303.bam 19159112452 BAM NA 6275b4ea-7303-474d-b2ff-688ff0ddc0dd 035c1c2e058694fa1f51862fecb56ee7 hg19 Primary Tumor C3N-01525-03 -C3N-01525.WXS.T C3N-01525 UCEC WXS tumor CPT0095890072 CPT0095890072.WholeExome.RP-1303.bam 21426214445 BAM NA fe0a0cc2-ce3c-4ab1-82c3-416752063a30 447d1524e445d74f34c42d1f55b64c5e hg19 Primary Tumor C3N-01525-03 -C3N-01525.WXS.T C3N-01525 UCEC WXS tumor CPT0095890074 CPT0095890074.WholeExome.RP-1303.bam 20732270877 BAM NA 15b499c5-49dd-41b6-b15d-542b4646e6dc 30d865ccf17da7ab5711fdbd2e53f4a9 hg19 Primary Tumor C3N-01525-03 -C3N-01525.WXS.T C3N-01525 UCEC WXS tumor CPT0095890075 CPT0095890075.WholeExome.RP-1303.bam 26480060080 BAM NA d1702bbe-9ae5-41f1-9043-17337ad9b89e 1f354041484648271637997b0c0b0368 hg19 Primary Tumor C3N-01525-03 -C3N-01525.WXS.T C3N-01525 UCEC WXS tumor CPT0095890076 CPT0095890076.WholeExome.RP-1303.bam 27022501021 BAM NA 1248440e-a461-419d-93ca-d1d399692f7f 5e07074be504773ca0370ae3616d7f6a hg19 Primary Tumor C3N-01525-03 -C3N-01525.WXS.T C3N-01525 UCEC WXS tumor CPT0095890077 CPT0095890077.WholeExome.RP-1303.bam 23446043722 BAM NA 82102bee-764b-4a07-9824-93425c1acb43 924c2fc6028ae7899db1c05bdd800a16 hg19 Primary Tumor C3N-01525-03 +C3N-01525.WXS.T.heterogeneity C3N-01525 UCEC WXS tumor CPT0095870049 CPT0095870049.WholeExome.RP-1303.bam 19488129987 BAM NA f6e72ede-837f-4ff3-9575-2e558fdfafd9 183679f6252b26d9ab6b01f268b309fb hg19 Primary Tumor C3N-01525-01 LMD heterogeneity LMD_nWWVqp Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.WXS.T.heterogeneity C3N-01525 UCEC WXS tumor CPT0095870051 CPT0095870051.WholeExome.RP-1303.bam 17019942693 BAM NA c2522a71-9fa1-4d64-84dc-be9f1b1b85cd d8424ac307da1b61b4f3379e8e91dfbf hg19 Primary Tumor C3N-01525-01 LMD heterogeneity LMD_pWW6vy Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.WXS.T.heterogeneity C3N-01525 UCEC WXS tumor CPT0095870052 CPT0095870052.WholeExome.RP-1303.bam 21791915492 BAM NA 415658f6-8f36-4d3d-9990-7fe5a7167635 d961308def9c767931fac91e5fbf0f3e hg19 Primary Tumor C3N-01525-01 LMD heterogeneity LMD_qWWX0y Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.WXS.T.heterogeneity C3N-01525 UCEC WXS tumor CPT0095870053 CPT0095870053.WholeExome.RP-1303.bam 16912365183 BAM NA 0b5550f1-4829-487d-8cb3-bbf13008dc5b dea42f64c6cb77ce4850831f539ada21 hg19 Primary Tumor C3N-01525-01 LMD heterogeneity LMD_rWWNxL Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.WXS.T.heterogeneity C3N-01525 UCEC WXS tumor CPT0095890070 CPT0095890070.WholeExome.RP-1303.bam 19159112452 BAM NA 6275b4ea-7303-474d-b2ff-688ff0ddc0dd 035c1c2e058694fa1f51862fecb56ee7 hg19 Primary Tumor C3N-01525-03 LMD heterogeneity LMD_PqqDX4 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.WXS.T.heterogeneity C3N-01525 UCEC WXS tumor CPT0095890072 CPT0095890072.WholeExome.RP-1303.bam 21426214445 BAM NA fe0a0cc2-ce3c-4ab1-82c3-416752063a30 447d1524e445d74f34c42d1f55b64c5e hg19 Primary Tumor C3N-01525-03 LMD heterogeneity LMD_RvvG2E Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.WXS.T.heterogeneity C3N-01525 UCEC WXS tumor CPT0095890074 CPT0095890074.WholeExome.RP-1303.bam 20732270877 BAM NA 15b499c5-49dd-41b6-b15d-542b4646e6dc 30d865ccf17da7ab5711fdbd2e53f4a9 hg19 Primary Tumor C3N-01525-03 LMD heterogeneity LMD_WAANkx Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.WXS.T.heterogeneity C3N-01525 UCEC WXS tumor CPT0095890075 CPT0095890075.WholeExome.RP-1303.bam 26480060080 BAM NA d1702bbe-9ae5-41f1-9043-17337ad9b89e 1f354041484648271637997b0c0b0368 hg19 Primary Tumor C3N-01525-03 LMD heterogeneity LMD_XBBOmg Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.WXS.T.heterogeneity C3N-01525 UCEC WXS tumor CPT0095890076 CPT0095890076.WholeExome.RP-1303.bam 27022501021 BAM NA 1248440e-a461-419d-93ca-d1d399692f7f 5e07074be504773ca0370ae3616d7f6a hg19 Primary Tumor C3N-01525-03 LMD heterogeneity LMD_YDDPo2 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-01525.WXS.T.heterogeneity C3N-01525 UCEC WXS tumor CPT0095890077 CPT0095890077.WholeExome.RP-1303.bam 23446043722 BAM NA 82102bee-764b-4a07-9824-93425c1acb43 924c2fc6028ae7899db1c05bdd800a16 hg19 Primary Tumor C3N-01525-03 LMD heterogeneity LMD_ZEEQq5 Duplicate item: UCEC LMD Heterogeneity Pilot C3N-01525.WXS.T.hg38 C3N-01525 UCEC WXS tumor CPT0095880009 8f21acac-0d82-485f-8eb5-072a6e2a866b_wxs_gdc_realn.bam 51857851993 BAM NA ce3160d2-cfc6-430e-b141-c931891de669 70ccc1713f3a46ef8c0274122e630c68 hg38 Primary Tumor C3N-01525-02 C3N-01526.MethArray.Green.T C3N-01526 UCEC Methylation Array tumor CPT0096010009 202234370093_R05C01_Grn.idat 13676231 IDAT Green bf513f79-a95a-4dd3-98b1-49e1c945732c 1a019cf03595ace7afd874a92ad7ebc4 NA Primary Tumor C3N-01526-01 C3N-01526.MethArray.Red.T C3N-01526 UCEC Methylation Array tumor CPT0096010009 202234370093_R05C01_Red.idat 13676231 IDAT Red cbc5c6f1-a129-4355-8d30-148454a70b15 bc0fe013aa60f1a56f889088edd6f6a0 NA Primary Tumor C3N-01526-01 @@ -23696,34 +23710,34 @@ C3N-01823.WXS.N C3N-01823 LUAD WXS blood_normal CPT0097610002 CPT0097610002.Whol C3N-01823.WXS.N.hg38 C3N-01823 LUAD WXS blood_normal CPT0097610002 7efb323f-2ab8-4f8b-b2c3-6148a5ccdd75_wxs_gdc_realn.bam 35435908121 BAM NA a59668f0-be1f-4eef-ac04-16e2a8d48d5f b0b049ff7b05bb08e037ba1e8ab596d7 hg38 Blood Derived Normal C3N-01823-31,C3N-01823-71 C3N-01823.WXS.T C3N-01823 LUAD WXS tumor CPT0097580009 CPT0097580009.WholeExome.RP-1303.bam 44032320229 BAM NA 3b24fc5b-267c-48ef-a8aa-6454383c5510 2e674956e05723940af2db20f3b1c9ac hg19 Primary Tumor C3N-01823-02 C3N-01823.WXS.T.hg38 C3N-01823 LUAD WXS tumor CPT0097580009 ff551e4f-c56a-486e-9b6d-9edcf85fffbb_wxs_gdc_realn.bam 59887110671 BAM NA 4041925d-db9d-4daf-85da-8170f8864174 7ec0c47e58d8ac0693252094d54e780b hg38 Primary Tumor C3N-01823-02 -C3N-01825.MethArray.Green.T C3N-01825 UCEC Methylation Array tumor CPT0097730006 203027390034_R07C01_Grn.idat 13676226 IDAT Green 75510140-ddf8-4f9d-9fc2-fed1fc4664ef f10207e7dec6315edfacfb80a40414eb NA Primary Tumor C3N-01825-03 C3N-01825.MethArray.Green.T.deprecated C3N-01825 UCEC Methylation Array tumor CPT0097710009 202234380054_R07C01_Grn.idat 13676231 IDAT Green b1b2e295-1918-4f45-8012-ca9b86c0e45f 03480cbaeb97b5025bb43ec77619e41c NA Primary Tumor C3N-01825-01 .deprecated -C3N-01825.MethArray.Red.T C3N-01825 UCEC Methylation Array tumor CPT0097730006 203027390034_R07C01_Red.idat 13676226 IDAT Red e7e485e4-b7c8-439d-bcc1-e3e63535fbcd f7f118372edd06a0886f984b78c778ca NA Primary Tumor C3N-01825-03 +C3N-01825.MethArray.Green.T.RDNA_oBQ7nk C3N-01825 UCEC Methylation Array tumor CPT0097730006 203027390034_R07C01_Grn.idat 13676226 IDAT Green 75510140-ddf8-4f9d-9fc2-fed1fc4664ef f10207e7dec6315edfacfb80a40414eb NA Primary Tumor C3N-01825-03 replacement_DNA RDNA_oBQ7nk Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-01825.MethArray.Red.T.deprecated C3N-01825 UCEC Methylation Array tumor CPT0097710009 202234380054_R07C01_Red.idat 13676231 IDAT Red d6efa57b-46aa-4fd0-a252-7c2613c4fb2c 88dcdde8b18fd7c4a724f19873906457 NA Primary Tumor C3N-01825-01 .deprecated -C3N-01825.miRNA-Seq.T C3N-01825 UCEC miRNA-Seq tumor CPT0097730009 181113_UNC31-K00269_0164_AH23NNBBXY_CAACTA_S5_L005_R1_001.unaln.bam 297846600 BAM NA f5b7ec01-eefb-43ad-95ee-7f4d42b8e34d 0c29d24ae4b92b7dca543b8d0140fd0f NA Primary Tumor C3N-01825-03 -C3N-01825.miRNA-Seq.T.hg38 C3N-01825 UCEC miRNA-Seq tumor CPT0097730009 2f0a37e7-e5bf-4bc7-a449-3d9c21031b2e_mirnaseq_gdc_realn.bam 335008133 BAM NA e07156c8-18ac-46d7-a551-40d8f4958b74 7fde5dc2e30634b5629191f8abeed1d9 hg38 Primary Tumor C3N-01825-03 -C3N-01825.RNA-Seq.chimeric.T.hg38 C3N-01825 UCEC RNA-Seq tumor CPT0097730009 46b52b78-d0ed-49d5-b4fc-90b29c68a03c.rna_seq.chimeric.gdc_realn.bam 36364545 BAM chimeric cbfb0efe-bf71-4918-b34f-1d5ebff0349c 98770d1f8d04fa2ba193fc40d00a29d3 hg38 Primary Tumor C3N-01825-03 +C3N-01825.MethArray.Red.T.RDNA_oBQ7nk C3N-01825 UCEC Methylation Array tumor CPT0097730006 203027390034_R07C01_Red.idat 13676226 IDAT Red e7e485e4-b7c8-439d-bcc1-e3e63535fbcd f7f118372edd06a0886f984b78c778ca NA Primary Tumor C3N-01825-03 replacement_DNA RDNA_oBQ7nk Duplicate item: Replacement DNA Distribution - original aliquot failed +C3N-01825.miRNA-Seq.T.RRNA_rGRXqW C3N-01825 UCEC miRNA-Seq tumor CPT0097730009 181113_UNC31-K00269_0164_AH23NNBBXY_CAACTA_S5_L005_R1_001.unaln.bam 297846600 BAM NA f5b7ec01-eefb-43ad-95ee-7f4d42b8e34d 0c29d24ae4b92b7dca543b8d0140fd0f NA Primary Tumor C3N-01825-03 replacement_RNA RRNA_rGRXqW Duplicate item: Replacement RNA Distribution - original aliquot failed +C3N-01825.miRNA-Seq.T.RRNA_rGRXqW.hg38 C3N-01825 UCEC miRNA-Seq tumor CPT0097730009 2f0a37e7-e5bf-4bc7-a449-3d9c21031b2e_mirnaseq_gdc_realn.bam 335008133 BAM NA e07156c8-18ac-46d7-a551-40d8f4958b74 7fde5dc2e30634b5629191f8abeed1d9 hg38 Primary Tumor C3N-01825-03 replacement_RNA RRNA_rGRXqW Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-01825.RNA-Seq.chimeric.T.hg38.deprecated C3N-01825 UCEC RNA-Seq tumor CPT0097710006 64d66d0c-9441-4c38-b8cf-08c40c0467bc.rna_seq.chimeric.gdc_realn.bam 86926400 BAM chimeric d7b5179d-63cb-47f5-9dac-faf1fdbc19f1 2c4e49102d9207f148abb852cc87e379 hg38 Primary Tumor C3N-01825-01 .deprecated -C3N-01825.RNA-Seq.genomic.T.hg38 C3N-01825 UCEC RNA-Seq tumor CPT0097730009 46b52b78-d0ed-49d5-b4fc-90b29c68a03c.rna_seq.genomic.gdc_realn.bam 8968150987 BAM genomic 4bccff88-f5f5-4720-ae98-5c35ba0025f8 a23ea9e38165bba0266f98852c364412 hg38 Primary Tumor C3N-01825-03 +C3N-01825.RNA-Seq.chimeric.T.RRNA_rGRXqW.hg38 C3N-01825 UCEC RNA-Seq tumor CPT0097730009 46b52b78-d0ed-49d5-b4fc-90b29c68a03c.rna_seq.chimeric.gdc_realn.bam 36364545 BAM chimeric cbfb0efe-bf71-4918-b34f-1d5ebff0349c 98770d1f8d04fa2ba193fc40d00a29d3 hg38 Primary Tumor C3N-01825-03 replacement_RNA RRNA_rGRXqW Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-01825.RNA-Seq.genomic.T.hg38.deprecated C3N-01825 UCEC RNA-Seq tumor CPT0097710006 64d66d0c-9441-4c38-b8cf-08c40c0467bc.rna_seq.genomic.gdc_realn.bam 7916984281 BAM genomic e4740b8e-a683-40b8-9122-27a7f2b796f5 3467957b17104dc00c84102837b83034 hg38 Primary Tumor C3N-01825-01 .deprecated -C3N-01825.RNA-Seq.R1.T C3N-01825 UCEC RNA-Seq tumor CPT0097730009 180606_UNC32-K00270_0097_AHVCKFBBXX_ACAGTG_S28_L008_R1_001.fastq.gz 4016926868 FASTQ NA 419d417d-b526-4604-99d8-dcda3c1e04a2 8c7c0f5aea734bfd8a90784074253913 NA Primary Tumor C3N-01825-03 +C3N-01825.RNA-Seq.genomic.T.RRNA_rGRXqW.hg38 C3N-01825 UCEC RNA-Seq tumor CPT0097730009 46b52b78-d0ed-49d5-b4fc-90b29c68a03c.rna_seq.genomic.gdc_realn.bam 8968150987 BAM genomic 4bccff88-f5f5-4720-ae98-5c35ba0025f8 a23ea9e38165bba0266f98852c364412 hg38 Primary Tumor C3N-01825-03 replacement_RNA RRNA_rGRXqW Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-01825.RNA-Seq.R1.T.deprecated C3N-01825 UCEC RNA-Seq tumor CPT0097710006 171107_UNC32-K00270_0063_BHLNTCBBXX_TAGCTT_S56_L006_R1_001.fastq.gz 3649504839 FASTQ NA fb6e7290-6e05-40fd-b122-340633db8e34 6e27d7f5cc7e0be3bd7675c075ddc51d NA Primary Tumor C3N-01825-01 .deprecated -C3N-01825.RNA-Seq.R2.T C3N-01825 UCEC RNA-Seq tumor CPT0097730009 180606_UNC32-K00270_0097_AHVCKFBBXX_ACAGTG_S28_L008_R2_001.fastq.gz 4314809464 FASTQ NA a94be969-d00d-4dc9-bbf5-202369fe602a b8a4950db0555463c9cad9112648fffb NA Primary Tumor C3N-01825-03 +C3N-01825.RNA-Seq.R1.T.RRNA_rGRXqW C3N-01825 UCEC RNA-Seq tumor CPT0097730009 180606_UNC32-K00270_0097_AHVCKFBBXX_ACAGTG_S28_L008_R1_001.fastq.gz 4016926868 FASTQ NA 419d417d-b526-4604-99d8-dcda3c1e04a2 8c7c0f5aea734bfd8a90784074253913 NA Primary Tumor C3N-01825-03 replacement_RNA RRNA_rGRXqW Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-01825.RNA-Seq.R2.T.deprecated C3N-01825 UCEC RNA-Seq tumor CPT0097710006 171107_UNC32-K00270_0063_BHLNTCBBXX_TAGCTT_S56_L006_R2_001.fastq.gz 3925202348 FASTQ NA ee34816a-0060-45f6-9813-334207970349 05040912ef651663e59b10e0ecd6aca5 NA Primary Tumor C3N-01825-01 .deprecated -C3N-01825.RNA-Seq.transcriptome.T.hg38 C3N-01825 UCEC RNA-Seq tumor CPT0097730009 46b52b78-d0ed-49d5-b4fc-90b29c68a03c.rna_seq.transcriptome.gdc_realn.bam 10256446091 BAM transcriptome 6c18889b-7a8f-4dbc-93c2-cbf6641e0142 c732b346ece255ccad993caac79a58de hg38 Primary Tumor C3N-01825-03 +C3N-01825.RNA-Seq.R2.T.RRNA_rGRXqW C3N-01825 UCEC RNA-Seq tumor CPT0097730009 180606_UNC32-K00270_0097_AHVCKFBBXX_ACAGTG_S28_L008_R2_001.fastq.gz 4314809464 FASTQ NA a94be969-d00d-4dc9-bbf5-202369fe602a b8a4950db0555463c9cad9112648fffb NA Primary Tumor C3N-01825-03 replacement_RNA RRNA_rGRXqW Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-01825.RNA-Seq.transcriptome.T.hg38.deprecated C3N-01825 UCEC RNA-Seq tumor CPT0097710006 64d66d0c-9441-4c38-b8cf-08c40c0467bc.rna_seq.transcriptome.gdc_realn.bam 7595758212 BAM transcriptome 398129c7-e54f-4423-b5d4-2a3dfb374ddc 2131b99aaece3db93f78043e71373477 hg38 Primary Tumor C3N-01825-01 .deprecated +C3N-01825.RNA-Seq.transcriptome.T.RRNA_rGRXqW.hg38 C3N-01825 UCEC RNA-Seq tumor CPT0097730009 46b52b78-d0ed-49d5-b4fc-90b29c68a03c.rna_seq.transcriptome.gdc_realn.bam 10256446091 BAM transcriptome 6c18889b-7a8f-4dbc-93c2-cbf6641e0142 c732b346ece255ccad993caac79a58de hg38 Primary Tumor C3N-01825-03 replacement_RNA RRNA_rGRXqW Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-01825.WGS.N C3N-01825 UCEC WGS blood_normal CPT0097750002 CPT0097750002.WholeGenome.RP-1303.bam 59370925934 BAM NA 37d69863-1e89-48e5-a8f8-0e6861762b99 b65210e53c1afad0f8d1d5be1f77c271 hg19 Blood Derived Normal C3N-01825-31,C3N-01825-71 C3N-01825.WGS.N.hg38 C3N-01825 UCEC WGS blood_normal CPT0097750002 e85c33bd-3b8d-4bad-9735-e48f81491019_wgs_gdc_realn.bam 87791073707 BAM NA 522582a7-24d6-4b9a-9e6a-5116e3ca5c72 26eaee75872fe5c52d07a18587eb8890 hg38 Blood Derived Normal C3N-01825-31,C3N-01825-71 -C3N-01825.WGS.T C3N-01825 UCEC WGS tumor CPT0097730006 CPT0097730006.WholeGenome.RP-1303.bam 59800912456 BAM NA c50da7a7-d110-4849-973a-5e9bc8e323eb 026515590459a4293d1d1c4171a647a9 hg19 Primary Tumor C3N-01825-03 C3N-01825.WGS.T.deprecated C3N-01825 UCEC WGS tumor CPT0097710009 CPT0097710009.WholeGenome.RP-1303.bam 62049197185 BAM NA 5f8d88f4-c399-41b2-9e81-2a46297a87d7 19b09eee700ee0aeeb7acdfb88d713b3 hg19 Primary Tumor C3N-01825-01 .deprecated -C3N-01825.WGS.T.hg38 C3N-01825 UCEC WGS tumor CPT0097730006 42791ee5-99f8-4230-940c-d17609188034_wgs_gdc_realn.bam 86915536728 BAM NA 45a82c6e-c6d4-4716-9626-01ddb64f0b4e 40543ab128c453ca527865e13d13a1e1 hg38 Primary Tumor C3N-01825-03 C3N-01825.WGS.T.hg38.deprecated C3N-01825 UCEC WGS tumor CPT0097710009 3ec666f3-df1c-438d-bcc1-555e4c7db92b_wgs_gdc_realn.bam 88870399289 BAM NA eb0e4fbc-5442-43f8-ae0e-4d8d6cb67f59 591d27324fd4a8989b404a1b89199d66 hg38 Primary Tumor C3N-01825-01 .deprecated +C3N-01825.WGS.T.RDNA_oBQ7nk C3N-01825 UCEC WGS tumor CPT0097730006 CPT0097730006.WholeGenome.RP-1303.bam 59800912456 BAM NA c50da7a7-d110-4849-973a-5e9bc8e323eb 026515590459a4293d1d1c4171a647a9 hg19 Primary Tumor C3N-01825-03 replacement_DNA RDNA_oBQ7nk Duplicate item: Replacement DNA Distribution - original aliquot failed +C3N-01825.WGS.T.RDNA_oBQ7nk.hg38 C3N-01825 UCEC WGS tumor CPT0097730006 42791ee5-99f8-4230-940c-d17609188034_wgs_gdc_realn.bam 86915536728 BAM NA 45a82c6e-c6d4-4716-9626-01ddb64f0b4e 40543ab128c453ca527865e13d13a1e1 hg38 Primary Tumor C3N-01825-03 replacement_DNA RDNA_oBQ7nk Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-01825.WXS.N C3N-01825 UCEC WXS blood_normal CPT0097750002 CPT0097750002.WholeExome.RP-1303.bam 37020388029 BAM NA 75503034-28e8-4297-b2b3-095730e2b53a c7df3d9a16a69fdecf707ecc5888c83d hg19 Blood Derived Normal C3N-01825-31,C3N-01825-71 C3N-01825.WXS.N.hg38 C3N-01825 UCEC WXS blood_normal CPT0097750002 e85c33bd-3b8d-4bad-9735-e48f81491019_wxs_gdc_realn.bam 51270405165 BAM NA bb985682-1aad-4aa0-acd4-039b2e5f2b49 ec72014149ee477dbbb006c973f263ce hg38 Blood Derived Normal C3N-01825-31,C3N-01825-71 -C3N-01825.WXS.T C3N-01825 UCEC WXS tumor CPT0097730006 CPT0097730006.WholeExome.RP-1303.bam 20447493334 BAM NA 34ec2553-a029-4ee3-9f97-7e2472d7e622 9227527140db19429294e5b9b17e15a3 hg19 Primary Tumor C3N-01825-03 C3N-01825.WXS.T.deprecated C3N-01825 UCEC WXS tumor CPT0097710009 CPT0097710009.WholeExome.RP-1303.bam 51333313128 BAM NA dc05be9d-0e08-4235-87a0-f88fbf139422 d4dcfabf384812b690b34d8d066d2692 hg19 Primary Tumor C3N-01825-01 .deprecated -C3N-01825.WXS.T.hg38 C3N-01825 UCEC WXS tumor CPT0097730006 42791ee5-99f8-4230-940c-d17609188034_wxs_gdc_realn.bam 28245493993 BAM NA d84c30fd-5552-408c-9f32-7fafcfd95b50 5375bee58b296f7debc10f99602037d7 hg38 Primary Tumor C3N-01825-03 C3N-01825.WXS.T.hg38.deprecated C3N-01825 UCEC WXS tumor CPT0097710009 3ec666f3-df1c-438d-bcc1-555e4c7db92b_wxs_gdc_realn.bam 71288873715 BAM NA e079441f-c166-44ee-b53b-33a6f6fcff85 93ff1fdf0fb39e86a1892e1f566377ec hg38 Primary Tumor C3N-01825-01 .deprecated +C3N-01825.WXS.T.RDNA_oBQ7nk C3N-01825 UCEC WXS tumor CPT0097730006 CPT0097730006.WholeExome.RP-1303.bam 20447493334 BAM NA 34ec2553-a029-4ee3-9f97-7e2472d7e622 9227527140db19429294e5b9b17e15a3 hg19 Primary Tumor C3N-01825-03 replacement_DNA RDNA_oBQ7nk Duplicate item: Replacement DNA Distribution - original aliquot failed +C3N-01825.WXS.T.RDNA_oBQ7nk.hg38 C3N-01825 UCEC WXS tumor CPT0097730006 42791ee5-99f8-4230-940c-d17609188034_wxs_gdc_realn.bam 28245493993 BAM NA d84c30fd-5552-408c-9f32-7fafcfd95b50 5375bee58b296f7debc10f99602037d7 hg38 Primary Tumor C3N-01825-03 replacement_DNA RDNA_oBQ7nk Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-01828.MethArray.Green.T C3N-01828 CCRCC Methylation Array tumor CPT0097850009 202234360009_R07C01_Grn.idat 13676226 IDAT Green eb5de2f6-7a85-457c-b52d-1f332af61c0a 4ebde2262daa0ccc02cf8f7ca25be297 NA Primary Tumor C3N-01828-01 C3N-01828.MethArray.Red.T C3N-01828 CCRCC Methylation Array tumor CPT0097850009 202234360009_R07C01_Red.idat 13676226 IDAT Red 9776f722-5dfe-4bbe-b79d-32cb69f9793f 5fbbc6feb699f1f1eeb79c53812f8226 NA Primary Tumor C3N-01828-01 C3N-01828.miRNA-Seq.A C3N-01828 CCRCC miRNA-Seq tissue_normal CPT0097880009 181119_UNC31-K00269_0165_AH27WCBBXY_ACAGTG_S29_L002_R1_001.unaln.bam 199593545 BAM NA e64106e7-60f9-4d26-bb92-f616d9dcc9ff bb79288add5de99492c35cb2c85b8a09 NA Solid Tissue Normal C3N-01828-06 @@ -23915,25 +23929,25 @@ C3N-01849.WGS.T C3N-01849 GBM WGS tumor CPT0224780006 CPT0224780006.WholeGenome. C3N-01849.WGS.T.hg38 C3N-01849 GBM WGS tumor CPT0224780006 049c6c50-80e2-46b6-bb4b-951301cf76f1_wgs_gdc_realn.bam 63623607195 BAM NA 1c6fb1d5-1bef-47ec-88bb-fbb2f185fc73 b9be9d365b2a7088ac07d70bcbc3fadc hg38 Primary Tumor C3N-01849-04 C3N-01849.WXS.N C3N-01849 GBM WXS blood_normal CPT0224830002 CPT0224830002.WholeExome.RP-1303.bam 28026085376 BAM NA 70d01c24-e736-408e-8ddf-61c55dc60de4 b7e2854beca2d2129172d4e84fcc29d9 hg19 Blood Derived Normal C3N-01849-31 C3N-01849.WXS.T C3N-01849 GBM WXS tumor CPT0224780006 CPT0224780006.WholeExome.RP-1303.bam 17373452560 BAM NA 65c12110-2efa-44de-a6a1-8823328fd1b0 976ce588b28ff245609a66e8692bfc8a hg19 Primary Tumor C3N-01849-04 -C3N-01850.MethArray.Green.T C3N-01850 GBM Methylation Array tumor CPT0125270009 203219650047_R08C01_Grn.idat 13676206 IDAT Green 986f4467-8c60-472b-b32c-afb23c642578 0f504f4dd24fbed25c9bd5b6c640cd02 NA Primary Tumor C3N-01850-03 C3N-01850.MethArray.Green.T.deprecated C3N-01850 GBM Methylation Array tumor CPT0125260005 203027390081_R07C01_Grn.idat 13676226 IDAT Green 13b7da88-3aad-48fb-b058-342086b9a2bf 8ec9afc431d0fa8ed7cebdd83782debb NA Primary Tumor C3N-01850-01 .deprecated -C3N-01850.MethArray.Red.T C3N-01850 GBM Methylation Array tumor CPT0125270009 203219650047_R08C01_Red.idat 13676206 IDAT Red 0acdbc29-be6b-4d09-a132-c64fb24fa5c8 fec8873d517068e0434bb6b7fef336d9 NA Primary Tumor C3N-01850-03 +C3N-01850.MethArray.Green.T.RDNA_rw5WW4 C3N-01850 GBM Methylation Array tumor CPT0125270009 203219650047_R08C01_Grn.idat 13676206 IDAT Green 986f4467-8c60-472b-b32c-afb23c642578 0f504f4dd24fbed25c9bd5b6c640cd02 NA Primary Tumor C3N-01850-03 replacement_DNA RDNA_rw5WW4 Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-01850.MethArray.Red.T.deprecated C3N-01850 GBM Methylation Array tumor CPT0125260005 203027390081_R07C01_Red.idat 13676226 IDAT Red febfe0c8-2b32-4228-8ce8-05d2d4704778 cc4f2b557fa42da23092c5964f32928f NA Primary Tumor C3N-01850-01 .deprecated -C3N-01850.miRNA-Seq.T C3N-01850 GBM miRNA-Seq tumor CPT0125270006 190228_UNC32-K00270_0151_AHYLY3BBXX_CACGAT_S31_L006_R1_001.unaln.bam 274271010 BAM NA 7060cc1e-8e41-48df-9775-ef103ac0e04e 0445ebf409594b10167ac6e088e3090d NA Primary Tumor C3N-01850-03 -C3N-01850.miRNA-Seq.T.hg38 C3N-01850 GBM miRNA-Seq tumor CPT0125270006 f80ec1e0-8672-4149-b200-3e7db59812d5_mirnaseq_gdc_realn.bam 308899234 BAM NA cf67421d-0794-434e-85b7-0d91eab3c4a1 060d4347c64fee090e112a5b150927ca hg38 Primary Tumor C3N-01850-03 -C3N-01850.RNA-Seq.chimeric.T.hg38 C3N-01850 GBM RNA-Seq tumor CPT0125270006 9a3a9679-9c09-4071-b7f0-d7a319e676cb.rna_seq.chimeric.gdc_realn.bam 40182928 BAM chimeric faeefc9c-0890-4837-8602-88ddd8484c9f b3492359d0be0e171e0e222a11370c2f hg38 Primary Tumor C3N-01850-03 -C3N-01850.RNA-Seq.genomic.T.hg38 C3N-01850 GBM RNA-Seq tumor CPT0125270006 9a3a9679-9c09-4071-b7f0-d7a319e676cb.rna_seq.genomic.gdc_realn.bam 8167951384 BAM genomic 59d05d32-8659-448d-9949-d4af103f74d9 91acc50a0406df272af809618f5c3a0c hg38 Primary Tumor C3N-01850-03 -C3N-01850.RNA-Seq.R1.T C3N-01850 GBM RNA-Seq tumor CPT0125270006 190426_UNC32-K00270_0167_AH7CK7BBXY_GGCATTCT-CTAGCTTG_S3_L001_R1_001.fastq.gz 3847474936 FASTQ NA 5da572da-3bd7-4c0c-86c3-1e86cc3482af 905279269a1c951e46742584a99e0aca NA Primary Tumor C3N-01850-03 -C3N-01850.RNA-Seq.R2.T C3N-01850 GBM RNA-Seq tumor CPT0125270006 190426_UNC32-K00270_0167_AH7CK7BBXY_GGCATTCT-CTAGCTTG_S3_L001_R2_001.fastq.gz 4041617916 FASTQ NA c11d25ee-91e0-40d1-abfa-cd21ed2df98a 95efb9bbbfea0e6ccdda41d01c89b90b NA Primary Tumor C3N-01850-03 -C3N-01850.RNA-Seq.transcriptome.T.hg38 C3N-01850 GBM RNA-Seq tumor CPT0125270006 9a3a9679-9c09-4071-b7f0-d7a319e676cb.rna_seq.transcriptome.gdc_realn.bam 7969135775 BAM transcriptome 42749fba-ede2-47e5-96d4-bb290836bb3c 381abd360c40eed3ab2c94ab5bc7cc45 hg38 Primary Tumor C3N-01850-03 +C3N-01850.MethArray.Red.T.RDNA_rw5WW4 C3N-01850 GBM Methylation Array tumor CPT0125270009 203219650047_R08C01_Red.idat 13676206 IDAT Red 0acdbc29-be6b-4d09-a132-c64fb24fa5c8 fec8873d517068e0434bb6b7fef336d9 NA Primary Tumor C3N-01850-03 replacement_DNA RDNA_rw5WW4 Duplicate item: Replacement DNA Distribution - original aliquot failed +C3N-01850.miRNA-Seq.T.RRNA_oqKWWB C3N-01850 GBM miRNA-Seq tumor CPT0125270006 190228_UNC32-K00270_0151_AHYLY3BBXX_CACGAT_S31_L006_R1_001.unaln.bam 274271010 BAM NA 7060cc1e-8e41-48df-9775-ef103ac0e04e 0445ebf409594b10167ac6e088e3090d NA Primary Tumor C3N-01850-03 replacement_RNA RRNA_oqKWWB Duplicate item: Replacement RNA Distribution - original aliquot failed +C3N-01850.miRNA-Seq.T.RRNA_oqKWWB.hg38 C3N-01850 GBM miRNA-Seq tumor CPT0125270006 f80ec1e0-8672-4149-b200-3e7db59812d5_mirnaseq_gdc_realn.bam 308899234 BAM NA cf67421d-0794-434e-85b7-0d91eab3c4a1 060d4347c64fee090e112a5b150927ca hg38 Primary Tumor C3N-01850-03 replacement_RNA RRNA_oqKWWB Duplicate item: Replacement RNA Distribution - original aliquot failed +C3N-01850.RNA-Seq.chimeric.T.RRNA_oqKWWB.hg38 C3N-01850 GBM RNA-Seq tumor CPT0125270006 9a3a9679-9c09-4071-b7f0-d7a319e676cb.rna_seq.chimeric.gdc_realn.bam 40182928 BAM chimeric faeefc9c-0890-4837-8602-88ddd8484c9f b3492359d0be0e171e0e222a11370c2f hg38 Primary Tumor C3N-01850-03 replacement_RNA RRNA_oqKWWB Duplicate item: Replacement RNA Distribution - original aliquot failed +C3N-01850.RNA-Seq.genomic.T.RRNA_oqKWWB.hg38 C3N-01850 GBM RNA-Seq tumor CPT0125270006 9a3a9679-9c09-4071-b7f0-d7a319e676cb.rna_seq.genomic.gdc_realn.bam 8167951384 BAM genomic 59d05d32-8659-448d-9949-d4af103f74d9 91acc50a0406df272af809618f5c3a0c hg38 Primary Tumor C3N-01850-03 replacement_RNA RRNA_oqKWWB Duplicate item: Replacement RNA Distribution - original aliquot failed +C3N-01850.RNA-Seq.R1.T.RRNA_oqKWWB C3N-01850 GBM RNA-Seq tumor CPT0125270006 190426_UNC32-K00270_0167_AH7CK7BBXY_GGCATTCT-CTAGCTTG_S3_L001_R1_001.fastq.gz 3847474936 FASTQ NA 5da572da-3bd7-4c0c-86c3-1e86cc3482af 905279269a1c951e46742584a99e0aca NA Primary Tumor C3N-01850-03 replacement_RNA RRNA_oqKWWB Duplicate item: Replacement RNA Distribution - original aliquot failed +C3N-01850.RNA-Seq.R2.T.RRNA_oqKWWB C3N-01850 GBM RNA-Seq tumor CPT0125270006 190426_UNC32-K00270_0167_AH7CK7BBXY_GGCATTCT-CTAGCTTG_S3_L001_R2_001.fastq.gz 4041617916 FASTQ NA c11d25ee-91e0-40d1-abfa-cd21ed2df98a 95efb9bbbfea0e6ccdda41d01c89b90b NA Primary Tumor C3N-01850-03 replacement_RNA RRNA_oqKWWB Duplicate item: Replacement RNA Distribution - original aliquot failed +C3N-01850.RNA-Seq.transcriptome.T.RRNA_oqKWWB.hg38 C3N-01850 GBM RNA-Seq tumor CPT0125270006 9a3a9679-9c09-4071-b7f0-d7a319e676cb.rna_seq.transcriptome.gdc_realn.bam 7969135775 BAM transcriptome 42749fba-ede2-47e5-96d4-bb290836bb3c 381abd360c40eed3ab2c94ab5bc7cc45 hg38 Primary Tumor C3N-01850-03 replacement_RNA RRNA_oqKWWB Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-01850.WGS.N C3N-01850 GBM WGS blood_normal CPT0125300002 CPT0125300002.WholeGenome.RP-1303.bam 63892207697 BAM NA d4f8975c-9c36-46cd-9e1e-f21bc6909364 0901d15d0f5649360ac919d026de787e hg19 Blood Derived Normal C3N-01850-31 C3N-01850.WGS.N.hg38 C3N-01850 GBM WGS blood_normal CPT0125300002 b0215200-5a5a-4ea7-89c6-09b058ab1ad4_wgs_gdc_realn.bam 94482934419 BAM NA 954ecba0-3516-4e98-b878-ca5f14147164 0237e8cdacdf33959d2a54a0bb6c8de0 hg38 Blood Derived Normal C3N-01850-31 -C3N-01850.WGS.T C3N-01850 GBM WGS tumor CPT0125270009 CPT0125270009.WholeGenome.RP-1303.bam 78628387429 BAM NA 24677690-6d0b-4926-93c8-f52e49a4979f 0bb6a4b6b274ba90bf40d6b33842b176 hg19 Primary Tumor C3N-01850-03 -C3N-01850.WGS.T.hg38 C3N-01850 GBM WGS tumor CPT0125270009 437c316c-0135-4d20-98eb-cb6b904b77a8_wgs_gdc_realn.bam 115208540661 BAM NA bdfe3ba9-4bbb-4d85-8a69-d912cc4ffa85 860084bead6e461528c3d946e535e6db hg38 Primary Tumor C3N-01850-03 +C3N-01850.WGS.T.RDNA_rw5WW4 C3N-01850 GBM WGS tumor CPT0125270009 CPT0125270009.WholeGenome.RP-1303.bam 78628387429 BAM NA 24677690-6d0b-4926-93c8-f52e49a4979f 0bb6a4b6b274ba90bf40d6b33842b176 hg19 Primary Tumor C3N-01850-03 replacement_DNA RDNA_rw5WW4 Duplicate item: Replacement DNA Distribution - original aliquot failed +C3N-01850.WGS.T.RDNA_rw5WW4.hg38 C3N-01850 GBM WGS tumor CPT0125270009 437c316c-0135-4d20-98eb-cb6b904b77a8_wgs_gdc_realn.bam 115208540661 BAM NA bdfe3ba9-4bbb-4d85-8a69-d912cc4ffa85 860084bead6e461528c3d946e535e6db hg38 Primary Tumor C3N-01850-03 replacement_DNA RDNA_rw5WW4 Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-01850.WXS.N C3N-01850 GBM WXS blood_normal CPT0125300002 CPT0125300002.WholeExome.RP-1303.bam 31632024625 BAM NA bb079077-ff91-42be-9a1d-26de9ae73076 b5d5e7051f88ed1e74fbaf03d73e6e9b hg19 Blood Derived Normal C3N-01850-31 C3N-01850.WXS.N.hg38 C3N-01850 GBM WXS blood_normal CPT0125300002 b0215200-5a5a-4ea7-89c6-09b058ab1ad4_wxs_gdc_realn.bam 43588861715 BAM NA a6c2900b-9a85-4717-992c-1101d0a679f6 8fc4b9ca07f66bf99eb104f9a0edf797 hg38 Blood Derived Normal C3N-01850-31 -C3N-01850.WXS.T C3N-01850 GBM WXS tumor CPT0125270009 CPT0125270009.WholeExome.RP-1303.bam 26533731398 BAM NA 4839f427-dcdd-4d03-bbf7-0e288fa1b044 500426a84ec1576aa58c16daf3f45d03 hg19 Primary Tumor C3N-01850-03 -C3N-01850.WXS.T.hg38 C3N-01850 GBM WXS tumor CPT0125270009 437c316c-0135-4d20-98eb-cb6b904b77a8_wxs_gdc_realn.bam 35820951839 BAM NA a01b4f54-6cdb-4d63-88cf-ac131ee31526 bc9bc38164fed18539a67b2a88af5015 hg38 Primary Tumor C3N-01850-03 +C3N-01850.WXS.T.RDNA_rw5WW4 C3N-01850 GBM WXS tumor CPT0125270009 CPT0125270009.WholeExome.RP-1303.bam 26533731398 BAM NA 4839f427-dcdd-4d03-bbf7-0e288fa1b044 500426a84ec1576aa58c16daf3f45d03 hg19 Primary Tumor C3N-01850-03 replacement_DNA RDNA_rw5WW4 Duplicate item: Replacement DNA Distribution - original aliquot failed +C3N-01850.WXS.T.RDNA_rw5WW4.hg38 C3N-01850 GBM WXS tumor CPT0125270009 437c316c-0135-4d20-98eb-cb6b904b77a8_wxs_gdc_realn.bam 35820951839 BAM NA a01b4f54-6cdb-4d63-88cf-ac131ee31526 bc9bc38164fed18539a67b2a88af5015 hg38 Primary Tumor C3N-01850-03 replacement_DNA RDNA_rw5WW4 Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-01851.MethArray.Green.T C3N-01851 GBM Methylation Array tumor CPT0186100006 203219670019_R02C01_Grn.idat 13676231 IDAT Green cc68905a-51c7-4188-bda7-687ff3b2d47e 7e6067cfd1aa455ed7c410e16a50c74b NA Primary Tumor C3N-01851-01 C3N-01851.MethArray.Red.T C3N-01851 GBM Methylation Array tumor CPT0186100006 203219670019_R02C01_Red.idat 13676231 IDAT Red 5d099454-d8d6-4d89-ae8a-dfc0ac84cf6b 4978328d6f0af15e9a4d53fe46f0bdc7 NA Primary Tumor C3N-01851-01 C3N-01851.miRNA-Seq.T C3N-01851 GBM miRNA-Seq tumor CPT0186100009 181219_UNC31-K00269_0173_BHYGJJBBXX_GATCAG_S9_L003_R1_001.unaln.bam 259629345 BAM NA fe53c343-784d-4ded-979b-be7a6e11a043 dbc628bac05777e33d5265757ff00117 NA Primary Tumor C3N-01851-01 @@ -24265,10 +24279,10 @@ C3N-01893.WXS.N C3N-01893 LSCC WXS blood_normal CPT0126510002 CPT0126510002.Whol C3N-01893.WXS.N.hg38 C3N-01893 LSCC WXS blood_normal CPT0126510002 616d5c12-0f0b-4730-a075-3f376fee9a14_wxs_gdc_realn.bam 35964101417 BAM NA 125eae90-6a68-4939-b71c-8aefb6447a24 a2cec08c2b8e032cf45c77241258f5f3 hg38 Blood Derived Normal C3N-01893-31 C3N-01893.WXS.T C3N-01893 LSCC WXS tumor CPT0126450006 CPT0126450006.WholeExome.RP-1303.bam 23375809725 BAM NA 8372aaaa-ebe8-4ed7-a6d9-c758a6bd83e6 662ff30867d959b639d8f7b3d9a661a1 hg19 Primary Tumor C3N-01893-02 C3N-01893.WXS.T.hg38 C3N-01893 LSCC WXS tumor CPT0126450006 b3ded0d8-e9fe-405b-aba1-07bbb123e5c1_wxs_gdc_realn.bam 32644844364 BAM NA 26d49884-64e6-44ce-a7c5-043c28417454 4d3f77aef00add37ca98f8c5e5e686b7 hg38 Primary Tumor C3N-01893-02 -C3N-01897.MethArray.Green.T C3N-01897 PDA Methylation Array tumor CPT0162300025 203561450103_R08C01_Grn.idat 13676216 IDAT Green 341298d6-7117-4cfa-9ae1-1df6c4efa725 6adf8f38a2c8d596130c25cd5da2979a NA Primary Tumor C3N-01897-01 -C3N-01897.MethArray.Green.T.core C3N-01897 PDA Methylation Array tumor CPT0162300019 203561450041_R03C01_Grn.idat 13676216 IDAT Green 2578100b-bba0-4119-abc5-4327f7783aed aa4c1351fadfe29a4c62661450cfe830 NA Primary Tumor C3N-01897-01 .core -C3N-01897.MethArray.Red.T C3N-01897 PDA Methylation Array tumor CPT0162300025 203561450103_R08C01_Red.idat 13676216 IDAT Red 7aeb0c1f-2097-4d30-8198-298edef0ecff 4639f4d8a2c11865ac3f36a0b9091857 NA Primary Tumor C3N-01897-01 -C3N-01897.MethArray.Red.T.core C3N-01897 PDA Methylation Array tumor CPT0162300019 203561450041_R03C01_Red.idat 13676216 IDAT Red f46d2bb9-f6c8-4628-aaaa-e49c785f150c 18027a025dd8b5669ab3140f44605484 NA Primary Tumor C3N-01897-01 .core +C3N-01897.MethArray.Green.T.BULK_OVLqnQ C3N-01897 PDA Methylation Array tumor CPT0162300025 203561450103_R08C01_Grn.idat 13676216 IDAT Green 341298d6-7117-4cfa-9ae1-1df6c4efa725 6adf8f38a2c8d596130c25cd5da2979a NA Primary Tumor C3N-01897-01 bulk_DNA BULK_OVLqnQ Duplicate item: PDA Pilot - bulk-derived DNA +C3N-01897.MethArray.Green.T.CORE_GyzgO3.core C3N-01897 PDA Methylation Array tumor CPT0162300019 203561450041_R03C01_Grn.idat 13676216 IDAT Green 2578100b-bba0-4119-abc5-4327f7783aed aa4c1351fadfe29a4c62661450cfe830 NA Primary Tumor C3N-01897-01 .core core_DNA CORE_GyzgO3 Duplicate item: PDA Pilot - core-derived DNA +C3N-01897.MethArray.Red.T.BULK_OVLqnQ C3N-01897 PDA Methylation Array tumor CPT0162300025 203561450103_R08C01_Red.idat 13676216 IDAT Red 7aeb0c1f-2097-4d30-8198-298edef0ecff 4639f4d8a2c11865ac3f36a0b9091857 NA Primary Tumor C3N-01897-01 bulk_DNA BULK_OVLqnQ Duplicate item: PDA Pilot - bulk-derived DNA +C3N-01897.MethArray.Red.T.CORE_GyzgO3.core C3N-01897 PDA Methylation Array tumor CPT0162300019 203561450041_R03C01_Red.idat 13676216 IDAT Red f46d2bb9-f6c8-4628-aaaa-e49c785f150c 18027a025dd8b5669ab3140f44605484 NA Primary Tumor C3N-01897-01 .core core_DNA CORE_GyzgO3 Duplicate item: PDA Pilot - core-derived DNA C3N-01897.miRNA-Seq.T C3N-01897 PDA miRNA-Seq tumor CPT0162300016 190108_UNC31-K00269_0176_AHYGLVBBXX_TTAGGC_S3_L002_R1_001.unaln.bam 170805407 BAM NA 647b8a60-ede8-42cb-8ecd-803f74d97945 3eedc53c5ccdc6ea838dadcb88cbcacb NA Primary Tumor C3N-01897-01 C3N-01897.miRNA-Seq.T.hg38 C3N-01897 PDA miRNA-Seq tumor CPT0162300016 1ae4985d-1671-490c-86f9-b699cd136111_mirnaseq_gdc_realn.bam 191030037 BAM NA ee1d3e3b-da43-4fb7-b3ad-44c7c946bbb9 8a3914b550293d97d61ef06d39ea8e99 hg38 Primary Tumor C3N-01897-01 C3N-01897.RNA-Seq.chimeric.T.hg38 C3N-01897 PDA RNA-Seq tumor CPT0162300016 47470daa-3006-43c8-9e62-9bf5bee521fc.rna_seq.chimeric.gdc_realn.bam 18321765 BAM chimeric f20e1415-044e-4d3a-8a18-4816205cce8c a39275ea287f077044e2d2a8b3cfd778 hg38 Primary Tumor C3N-01897-01 @@ -24278,16 +24292,20 @@ C3N-01897.RNA-Seq.R2.T C3N-01897 PDA RNA-Seq tumor CPT0162300016 190115_UNC31-K0 C3N-01897.RNA-Seq.transcriptome.T.hg38 C3N-01897 PDA RNA-Seq tumor CPT0162300016 47470daa-3006-43c8-9e62-9bf5bee521fc.rna_seq.transcriptome.gdc_realn.bam 8155854347 BAM transcriptome 35ffb734-f78f-4f77-add5-d28a5f812247 455ac2586e7af871112967f713dc6b8b hg38 Primary Tumor C3N-01897-01 C3N-01897.WGS.N C3N-01897 PDA WGS blood_normal CPT0162360002 CPT0162360002.WholeGenome.RP-1303.bam 78111846322 BAM NA 47c10473-1eb8-4915-9f71-1b37cc89d09e 1cd0eadfec21242f528c8d35da82cb5a hg19 Blood Derived Normal C3N-01897-31 C3N-01897.WGS.N.hg38 C3N-01897 PDA WGS blood_normal CPT0162360002 3bb8fcc8-1937-48f1-adf3-9431e7ea7f24_wgs_gdc_realn.bam 111496052020 BAM NA d97d2ce5-d2dc-48f3-8918-b4023e0d16c0 e1c7be3889a846c5ab3a1ee84df0c3d9 hg38 Blood Derived Normal C3N-01897-31 -C3N-01897.WGS.T C3N-01897 PDA WGS tumor CPT0162300025 CPT0162300025.WholeGenome.RP-1303.bam 158783112189 BAM NA aae4434f-2159-45c3-8b2d-379b8ef38aac 29ad528ded704a833291589488474bb6 hg19 Primary Tumor C3N-01897-01 -C3N-01897.WGS.T.core C3N-01897 PDA WGS tumor CPT0162300019 CPT0162300019.WholeGenome.RP-1303.bam 71954267535 BAM NA fe784f88-7159-420c-a239-70c9dc208a23 f75dcf4addda7659a7aaaf56fdc5771b hg19 Primary Tumor C3N-01897-01 .core -C3N-01897.WGS.T.hg38 C3N-01897 PDA WGS tumor CPT0162300025 84bc5e5b-8adb-4fb6-a322-3b24daf08ec8_wgs_gdc_realn.bam 230465074591 BAM NA bfaee155-68a0-4d46-aac6-d7e364233807 371b67958f865d6cd32e0fc3070e8e73 hg38 Primary Tumor C3N-01897-01 -C3N-01897.WGS.T.hg38.core C3N-01897 PDA WGS tumor CPT0162300019 6096e349-183e-41d9-8d19-8dc690c9137e_wgs_gdc_realn.bam 103897361685 BAM NA 3b765381-ef4c-4756-bada-8f5238668016 0e5025377845d086cef73a029e0c87df hg38 Primary Tumor C3N-01897-01 .core +C3N-01897.WGS.T.BULK_OVLqnQ C3N-01897 PDA WGS tumor CPT0162300025 CPT0162300025.WholeGenome.RP-1303.bam 158783112189 BAM NA aae4434f-2159-45c3-8b2d-379b8ef38aac 29ad528ded704a833291589488474bb6 hg19 Primary Tumor C3N-01897-01 bulk_DNA BULK_OVLqnQ Duplicate item: PDA Pilot - bulk-derived DNA +C3N-01897.WGS.T.BULK_OVLqnQ.hg38 C3N-01897 PDA WGS tumor CPT0162300025 84bc5e5b-8adb-4fb6-a322-3b24daf08ec8_wgs_gdc_realn.bam 230465074591 BAM NA bfaee155-68a0-4d46-aac6-d7e364233807 371b67958f865d6cd32e0fc3070e8e73 hg38 Primary Tumor C3N-01897-01 bulk_DNA BULK_OVLqnQ Duplicate item: PDA Pilot - bulk-derived DNA +C3N-01897.WGS.T.CORE_GyzgO3.core C3N-01897 PDA WGS tumor CPT0162300019 CPT0162300019.WholeGenome.RP-1303.bam 71954267535 BAM NA fe784f88-7159-420c-a239-70c9dc208a23 f75dcf4addda7659a7aaaf56fdc5771b hg19 Primary Tumor C3N-01897-01 .core core_DNA CORE_GyzgO3 Duplicate item: PDA Pilot - core-derived DNA +C3N-01897.WGS.T.CORE_GyzgO3.hg38.core C3N-01897 PDA WGS tumor CPT0162300019 6096e349-183e-41d9-8d19-8dc690c9137e_wgs_gdc_realn.bam 103897361685 BAM NA 3b765381-ef4c-4756-bada-8f5238668016 0e5025377845d086cef73a029e0c87df hg38 Primary Tumor C3N-01897-01 .core core_DNA CORE_GyzgO3 Duplicate item: PDA Pilot - core-derived DNA C3N-01897.WXS.N C3N-01897 PDA WXS blood_normal CPT0162360002 CPT0162360002.WholeExome.RP-1303.bam 21906030833 BAM NA e40ea4d3-8d13-42a4-8b2e-e774765273b7 788367c611fda17a8bba118ec3df2f0b hg19 Blood Derived Normal C3N-01897-31 C3N-01897.WXS.N.hg38 C3N-01897 PDA WXS blood_normal CPT0162360002 3bb8fcc8-1937-48f1-adf3-9431e7ea7f24_wxs_gdc_realn.bam 30186380588 BAM NA 9eacaf4b-96a4-4053-b3cb-c725c77a347b 011dd0f8e3dbd30c9774ac7ab141ce79 hg38 Blood Derived Normal C3N-01897-31 -C3N-01897.WXS.T.core.high_cov C3N-01897 PDA WXS tumor CPT0162300019 CPT0162300019.WholeExome.RP-1303.bam 68103574759 BAM NA dec364d2-cc30-4ed1-8fbe-81ecd61f016f 9396ce327577e44dbfa21202ad7b257a hg19 Primary Tumor C3N-01897-01 .core.high_cov -C3N-01897.WXS.T.hg38.core.high_cov C3N-01897 PDA WXS tumor CPT0162300019 6096e349-183e-41d9-8d19-8dc690c9137e_wxs_gdc_realn.bam 94888641588 BAM NA 9275086f-3c69-403f-9051-2c857279c158 4fd17ea762785c62b06eaac8819e4c97 hg38 Primary Tumor C3N-01897-01 .core.high_cov -C3N-01897.WXS.T.hg38.high_cov C3N-01897 PDA WXS tumor CPT0162300025 84bc5e5b-8adb-4fb6-a322-3b24daf08ec8_wxs_gdc_realn.bam 69545022042 BAM NA 55945505-5a16-4af4-bd12-9be92a741eee f3983d6f5d74254abe653aad11e5129f hg38 Primary Tumor C3N-01897-01 .high_cov -C3N-01897.WXS.T.high_cov C3N-01897 PDA WXS tumor CPT0162300025 CPT0162300025.WholeExome.RP-1303.bam 48974407289 BAM NA 5773f62a-fd76-4ab1-b457-a9d41dc937d2 7e0032225587ada183fbb6bb4eaed399 hg19 Primary Tumor C3N-01897-01 .high_cov +C3N-01897.WXS.T.BULK_OVLqnQ.hg38.high_cov C3N-01897 PDA WXS tumor CPT0162300025 84bc5e5b-8adb-4fb6-a322-3b24daf08ec8_wxs_gdc_realn.bam 69545022042 BAM NA 55945505-5a16-4af4-bd12-9be92a741eee f3983d6f5d74254abe653aad11e5129f hg38 Primary Tumor C3N-01897-01 .high_cov bulk_DNA BULK_OVLqnQ Duplicate item: PDA Pilot - bulk-derived DNA +C3N-01897.WXS.T.BULK_OVLqnQ.high_cov C3N-01897 PDA WXS tumor CPT0162300025 CPT0162300025.WholeExome.RP-1303.bam 48974407289 BAM NA 5773f62a-fd76-4ab1-b457-a9d41dc937d2 7e0032225587ada183fbb6bb4eaed399 hg19 Primary Tumor C3N-01897-01 .high_cov bulk_DNA BULK_OVLqnQ Duplicate item: PDA Pilot - bulk-derived DNA +C3N-01897.WXS.T.CORE_GyzgO3.core.high_cov C3N-01897 PDA WXS tumor CPT0162300019 CPT0162300019.WholeExome.RP-1303.bam 68103574759 BAM NA dec364d2-cc30-4ed1-8fbe-81ecd61f016f 9396ce327577e44dbfa21202ad7b257a hg19 Primary Tumor C3N-01897-01 .core.high_cov core_DNA CORE_GyzgO3 Duplicate item: PDA Pilot - core-derived DNA +C3N-01897.WXS.T.CORE_GyzgO3.hg38.core.high_cov C3N-01897 PDA WXS tumor CPT0162300019 6096e349-183e-41d9-8d19-8dc690c9137e_wxs_gdc_realn.bam 94888641588 BAM NA 9275086f-3c69-403f-9051-2c857279c158 4fd17ea762785c62b06eaac8819e4c97 hg38 Primary Tumor C3N-01897-01 .core.high_cov core_DNA CORE_GyzgO3 Duplicate item: PDA Pilot - core-derived DNA +C3N-01898.RNA-Seq.R1.T C3N-01898 PDA RNA-Seq tumor CPT0162380028 200807_UNC32-K00270_0255_AHHY2WBBXY_GCCACAGG-CATGCCAT_S10_L007_R1_001.fastq.gz 3316609926 FASTQ NA 694277e7-1aff-43fb-8e21-b273a0c01c0c c1e841ac4e503251103bbeebbb84d3a0 NA Primary Tumor C3N-01898-04 +C3N-01898.RNA-Seq.R2.T C3N-01898 PDA RNA-Seq tumor CPT0162380028 200807_UNC32-K00270_0255_AHHY2WBBXY_GCCACAGG-CATGCCAT_S10_L007_R2_001.fastq.gz 3701937380 FASTQ NA a19de46c-14a1-4ce2-b5d4-a9b165d0de3c ae2f903c68f12ed0b289f0c01dbf17e5 NA Primary Tumor C3N-01898-04 +C3N-01899.RNA-Seq.R1.T C3N-01899 PDA RNA-Seq tumor CPT0162450029 200807_UNC32-K00270_0255_AHHY2WBBXY_GTGTCGGA-GCTTGCGC_S14_L008_R1_001.fastq.gz 3734049373 FASTQ NA d7b1e5cb-031f-4fbf-b7ed-351cbedff5d0 61c9b289bd2f99bb2c3cf02bf0f7e3f9 NA Primary Tumor C3N-01899-02 +C3N-01899.RNA-Seq.R2.T C3N-01899 PDA RNA-Seq tumor CPT0162450029 200807_UNC32-K00270_0255_AHHY2WBBXY_GTGTCGGA-GCTTGCGC_S14_L008_R2_001.fastq.gz 4458738039 FASTQ NA d394d5b2-2762-4c60-b68d-fcfb9ea43bbf 1c2ead47fa98f1cebeb8811d1da804a0 NA Primary Tumor C3N-01899-02 C3N-01900.MethArray.Green.T C3N-01900 PDA Methylation Array tumor CPT0162600008 203561450102_R01C01_Grn.idat 13676236 IDAT Green ec22480d-960c-450f-baec-b3dded6df11e 09b4fb5fe64e9ad2e57a41fe8276cba7 NA Primary Tumor C3N-01900-03 C3N-01900.MethArray.Red.T C3N-01900 PDA Methylation Array tumor CPT0162600008 203561450102_R01C01_Red.idat 13676236 IDAT Red c23e280e-05d6-4622-bf1d-e81bd5d26b1d 1c71e1893f19bd15410a324ed0112c8e NA Primary Tumor C3N-01900-03 C3N-01900.miRNA-Seq.T C3N-01900 PDA miRNA-Seq tumor CPT0162600011 190712_UNC32-K00270_0192_BH7HL3BBXY_ACTGAT_S1_L004_R1_001.unaln.bam 255444431 BAM NA 4052e1de-db18-4cb2-92a5-ba03ae107ca1 d91c572808973e9bcea5336e1e3c5390 NA Primary Tumor C3N-01900-03 @@ -24815,66 +24833,66 @@ C3N-02030.MethArray.Green.T C3N-02030 UCEC Methylation Array tumor CPT0133770011 C3N-02030.MethArray.Red.T C3N-02030 UCEC Methylation Array tumor CPT0133770011 203561620087_R05C01_Red.idat 13676226 IDAT Red e240a310-6a23-49e1-973c-0960e1c3ec41 b5be762ab131ee13c22fd2ec6702466d NA Primary Tumor C3N-02030-02 C3N-02030.miRNA-Seq.T C3N-02030 UCEC miRNA-Seq tumor CPT0133770014 190508_UNC31-K00269_0215_BH7FYKBBXY_ACAGTG_S5_L003_R1_001.unaln.bam 194461538 BAM NA 700fc28c-1180-4305-a5ea-45027a60430b 5242e290b204bb0a72b8149813fb1f18 NA Primary Tumor C3N-02030-02 C3N-02030.miRNA-Seq.T.hg38 C3N-02030 UCEC miRNA-Seq tumor CPT0133770014 5b485b03-ddbd-4589-a450-b37b39c2756e_mirnaseq_gdc_realn.bam 220002404 BAM NA 53e7124b-718f-4f12-87fa-7883f7283601 7c73d6f0aa352cc3602159dce129825e hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.chimeric.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760065 b7c299cf-b8e1-45b7-aa63-9a6ee1a5e28d.rna_seq.chimeric.gdc_realn.bam 214613511 BAM chimeric af087d22-02bf-4eca-98f3-a329aefe3042 51af91bc0be8430084ebe1fb2bf00755 hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.chimeric.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760068 24bf27fc-29ff-45cf-a6ac-a3a909c85d1f.rna_seq.chimeric.gdc_realn.bam 164421741 BAM chimeric ce1090ca-3503-428d-8c7e-7ca1de429449 9fe93917779042d8f9c63356d8de415f hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.chimeric.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760071 37e56339-3a43-482e-a669-50202032c3c1.rna_seq.chimeric.gdc_realn.bam 154086933 BAM chimeric 8830baab-5791-4a7c-b344-3259edf81b38 35cfe4abc24c5ad325b3e0cff96d9fd7 hg38 Primary Tumor C3N-02030-02 +C3N-02030.RNA-Seq.chimeric.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760065 b7c299cf-b8e1-45b7-aa63-9a6ee1a5e28d.rna_seq.chimeric.gdc_realn.bam 214613511 BAM chimeric af087d22-02bf-4eca-98f3-a329aefe3042 51af91bc0be8430084ebe1fb2bf00755 hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_K3qAMR Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.chimeric.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760068 24bf27fc-29ff-45cf-a6ac-a3a909c85d1f.rna_seq.chimeric.gdc_realn.bam 164421741 BAM chimeric ce1090ca-3503-428d-8c7e-7ca1de429449 9fe93917779042d8f9c63356d8de415f hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_N3w7P6 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.chimeric.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760071 37e56339-3a43-482e-a669-50202032c3c1.rna_seq.chimeric.gdc_realn.bam 154086933 BAM chimeric 8830baab-5791-4a7c-b344-3259edf81b38 35cfe4abc24c5ad325b3e0cff96d9fd7 hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_Q9zAVl Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.chimeric.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780073 4daf9855-3647-4e22-a5d8-7f66a7c0f2bc.rna_seq.chimeric.gdc_realn.bam 455043734 BAM chimeric c509d079-6f18-458b-b691-c78fc38d97c9 d228250e29fc450bd0771e64ad2be295 hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_V3G9l5 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.chimeric.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780076 1bbd699a-febe-43d6-80c0-99af68a4e600.rna_seq.chimeric.gdc_realn.bam 286668591 BAM chimeric 7d873eba-322d-4586-bb01-2980670fe747 826547fb06e2b35cb98581cccba565cb hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_Y3LR00 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.chimeric.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780079 648b0243-2c9c-47ce-8888-089a4bee6777.rna_seq.chimeric.gdc_realn.bam 172524977 BAM chimeric b63552a1-1070-4b35-95bc-cc6ea94835b2 7ba2499f52f040f74472991145c1ffce hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_2KZEOJ Duplicate item: UCEC LMD Heterogeneity Pilot C3N-02030.RNA-Seq.chimeric.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133770014 9432477a-520f-4ed0-8772-91d5e8b9ae2e.rna_seq.chimeric.gdc_realn.bam 33767136 BAM chimeric d74b0533-eb74-47eb-b9cb-c35b0c6d4eef 08699958d7d1d5ce181f19af219336a1 hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.chimeric.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780073 4daf9855-3647-4e22-a5d8-7f66a7c0f2bc.rna_seq.chimeric.gdc_realn.bam 455043734 BAM chimeric c509d079-6f18-458b-b691-c78fc38d97c9 d228250e29fc450bd0771e64ad2be295 hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.chimeric.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780076 1bbd699a-febe-43d6-80c0-99af68a4e600.rna_seq.chimeric.gdc_realn.bam 286668591 BAM chimeric 7d873eba-322d-4586-bb01-2980670fe747 826547fb06e2b35cb98581cccba565cb hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.chimeric.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780079 648b0243-2c9c-47ce-8888-089a4bee6777.rna_seq.chimeric.gdc_realn.bam 172524977 BAM chimeric b63552a1-1070-4b35-95bc-cc6ea94835b2 7ba2499f52f040f74472991145c1ffce hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.genomic.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760065 b7c299cf-b8e1-45b7-aa63-9a6ee1a5e28d.rna_seq.genomic.gdc_realn.bam 8836025348 BAM genomic d8c15a94-8136-4a2e-bfab-11f4de178d21 cadb4a3c33c4fd947298087295b6e58e hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.genomic.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760068 24bf27fc-29ff-45cf-a6ac-a3a909c85d1f.rna_seq.genomic.gdc_realn.bam 8894460374 BAM genomic 2cfd5bda-bfbc-42de-a9bf-ce46e35aa2ad 95bb6b7c6c473f1ea803ad08aa603887 hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.genomic.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760071 37e56339-3a43-482e-a669-50202032c3c1.rna_seq.genomic.gdc_realn.bam 9223803685 BAM genomic 54b3330e-3529-4d2e-9f81-921404b41375 0a5c135b9b6eb2950c84cb5b9486be31 hg38 Primary Tumor C3N-02030-02 +C3N-02030.RNA-Seq.genomic.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760065 b7c299cf-b8e1-45b7-aa63-9a6ee1a5e28d.rna_seq.genomic.gdc_realn.bam 8836025348 BAM genomic d8c15a94-8136-4a2e-bfab-11f4de178d21 cadb4a3c33c4fd947298087295b6e58e hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_K3qAMR Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.genomic.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760068 24bf27fc-29ff-45cf-a6ac-a3a909c85d1f.rna_seq.genomic.gdc_realn.bam 8894460374 BAM genomic 2cfd5bda-bfbc-42de-a9bf-ce46e35aa2ad 95bb6b7c6c473f1ea803ad08aa603887 hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_N3w7P6 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.genomic.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760071 37e56339-3a43-482e-a669-50202032c3c1.rna_seq.genomic.gdc_realn.bam 9223803685 BAM genomic 54b3330e-3529-4d2e-9f81-921404b41375 0a5c135b9b6eb2950c84cb5b9486be31 hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_Q9zAVl Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.genomic.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780073 4daf9855-3647-4e22-a5d8-7f66a7c0f2bc.rna_seq.genomic.gdc_realn.bam 13118776536 BAM genomic 310e6355-e43e-4978-99d4-2e72bef96bf0 c24d951367075ee9ac937de112b3131d hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_V3G9l5 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.genomic.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780076 1bbd699a-febe-43d6-80c0-99af68a4e600.rna_seq.genomic.gdc_realn.bam 11507995942 BAM genomic 522d5864-e687-4cc6-a26f-de8076c11c6a 33d60db35aa3365fe752fa680da14046 hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_Y3LR00 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.genomic.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780079 648b0243-2c9c-47ce-8888-089a4bee6777.rna_seq.genomic.gdc_realn.bam 10853065284 BAM genomic cc3326df-6485-4f69-b4f9-29879f597271 24906ae4c4baaaf1060a614d28d8eed5 hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_2KZEOJ Duplicate item: UCEC LMD Heterogeneity Pilot C3N-02030.RNA-Seq.genomic.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133770014 9432477a-520f-4ed0-8772-91d5e8b9ae2e.rna_seq.genomic.gdc_realn.bam 8145731176 BAM genomic 76a3306c-645d-4c00-a0b6-17454d8c5c65 4a162b9d2e3a95a7559810cc9b1440f2 hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.genomic.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780073 4daf9855-3647-4e22-a5d8-7f66a7c0f2bc.rna_seq.genomic.gdc_realn.bam 13118776536 BAM genomic 310e6355-e43e-4978-99d4-2e72bef96bf0 c24d951367075ee9ac937de112b3131d hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.genomic.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780076 1bbd699a-febe-43d6-80c0-99af68a4e600.rna_seq.genomic.gdc_realn.bam 11507995942 BAM genomic 522d5864-e687-4cc6-a26f-de8076c11c6a 33d60db35aa3365fe752fa680da14046 hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.genomic.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780079 648b0243-2c9c-47ce-8888-089a4bee6777.rna_seq.genomic.gdc_realn.bam 10853065284 BAM genomic cc3326df-6485-4f69-b4f9-29879f597271 24906ae4c4baaaf1060a614d28d8eed5 hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.R1.T C3N-02030 UCEC RNA-Seq tumor CPT0133760065 200212_UNC31-K00269_0265_BHGCWGBBXY_TCATCCTT-AGCGAGCT_S11_L003_R1_001.fastq.gz 3891952742 FASTQ NA bac36753-12a5-4b17-a95b-628317566e97 121ffaaf4a940f2e4f8c6cf071556cde NA Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.R1.T C3N-02030 UCEC RNA-Seq tumor CPT0133760068 200212_UNC31-K00269_0265_BHGCWGBBXY_AGGTTATA-CAGTTCCG_S4_L002_R1_001.fastq.gz 3650759312 FASTQ NA bc77c5b2-bb5b-4b41-ba1e-e7fe70d26030 2719d1cd5f302ea0299ef775023b07a0 NA Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.R1.T C3N-02030 UCEC RNA-Seq tumor CPT0133760071 200212_UNC31-K00269_0265_BHGCWGBBXY_GAACCGCG-TGACCTTA_S5_L002_R1_001.fastq.gz 3961602699 FASTQ NA 5ad5897e-92b3-47e6-8312-699a61fc5136 2e1fb3e955b95ba27f59a8fbaf7a9d18 NA Primary Tumor C3N-02030-02 C3N-02030.RNA-Seq.R1.T C3N-02030 UCEC RNA-Seq tumor CPT0133770014 190604_UNC32-K00270_0177_AH7F5VBBXY_CAACAATG-CTTCACGG_S3_L001_R1_001.fastq.gz 3797075959 FASTQ NA 235c78ef-decc-43e8-9cd2-72dc3eb0cd60 21e2472d155c465796ec6f2bb435241a NA Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.R1.T C3N-02030 UCEC RNA-Seq tumor CPT0133780073 200212_UNC31-K00269_0265_BHGCWGBBXY_TATCGCAC-CTTAGTGT_S1_L001_R1_001.fastq.gz 5251570745 FASTQ NA 07069cd0-9954-4076-b91e-619b40f4433e 6217af3aeafb6445a8d79e8fd604ceb5 NA Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.R1.T C3N-02030 UCEC RNA-Seq tumor CPT0133780076 200212_UNC31-K00269_0265_BHGCWGBBXY_CGCTATGT-TCCGACAC_S2_L001_R1_001.fastq.gz 4709238926 FASTQ NA d2e5a5ef-168b-4eee-80a3-2d7910c501b5 fa77d5dd36a6977ed864d09816d221ce NA Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.R1.T C3N-02030 UCEC RNA-Seq tumor CPT0133780079 200212_UNC31-K00269_0265_BHGCWGBBXY_GTATGTTC-AACAGGAA_S3_L001_R1_001.fastq.gz 4507887248 FASTQ NA 45e801c2-3bc4-4d2c-890c-772839aaf7ef 232796b9f856d0d466cd02066c402e3e NA Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.R2.T C3N-02030 UCEC RNA-Seq tumor CPT0133760065 200212_UNC31-K00269_0265_BHGCWGBBXY_TCATCCTT-AGCGAGCT_S11_L003_R2_001.fastq.gz 4293519061 FASTQ NA 80bb4040-ac35-42eb-afb0-a961027bc4de 29194e4acb96fe14894f620c9afec4ac NA Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.R2.T C3N-02030 UCEC RNA-Seq tumor CPT0133760068 200212_UNC31-K00269_0265_BHGCWGBBXY_AGGTTATA-CAGTTCCG_S4_L002_R2_001.fastq.gz 3948002383 FASTQ NA ca28739a-4a7e-4bf1-82f8-421b65b9be40 08c8c91c7692c9ae924a5cf646d0b411 NA Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.R2.T C3N-02030 UCEC RNA-Seq tumor CPT0133760071 200212_UNC31-K00269_0265_BHGCWGBBXY_GAACCGCG-TGACCTTA_S5_L002_R2_001.fastq.gz 4349735026 FASTQ NA a8d02375-61bb-4f66-b57e-b81abb4e38d4 89bea8da76d485adf118d330bca74fbb NA Primary Tumor C3N-02030-02 +C3N-02030.RNA-Seq.R1.T.heterogeneity C3N-02030 UCEC RNA-Seq tumor CPT0133760065 200212_UNC31-K00269_0265_BHGCWGBBXY_TCATCCTT-AGCGAGCT_S11_L003_R1_001.fastq.gz 3891952742 FASTQ NA bac36753-12a5-4b17-a95b-628317566e97 121ffaaf4a940f2e4f8c6cf071556cde NA Primary Tumor C3N-02030-02 LMD heterogeneity LMD_K3qAMR Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.R1.T.heterogeneity C3N-02030 UCEC RNA-Seq tumor CPT0133760068 200212_UNC31-K00269_0265_BHGCWGBBXY_AGGTTATA-CAGTTCCG_S4_L002_R1_001.fastq.gz 3650759312 FASTQ NA bc77c5b2-bb5b-4b41-ba1e-e7fe70d26030 2719d1cd5f302ea0299ef775023b07a0 NA Primary Tumor C3N-02030-02 LMD heterogeneity LMD_N3w7P6 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.R1.T.heterogeneity C3N-02030 UCEC RNA-Seq tumor CPT0133760071 200212_UNC31-K00269_0265_BHGCWGBBXY_GAACCGCG-TGACCTTA_S5_L002_R1_001.fastq.gz 3961602699 FASTQ NA 5ad5897e-92b3-47e6-8312-699a61fc5136 2e1fb3e955b95ba27f59a8fbaf7a9d18 NA Primary Tumor C3N-02030-02 LMD heterogeneity LMD_Q9zAVl Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.R1.T.heterogeneity C3N-02030 UCEC RNA-Seq tumor CPT0133780073 200212_UNC31-K00269_0265_BHGCWGBBXY_TATCGCAC-CTTAGTGT_S1_L001_R1_001.fastq.gz 5251570745 FASTQ NA 07069cd0-9954-4076-b91e-619b40f4433e 6217af3aeafb6445a8d79e8fd604ceb5 NA Primary Tumor C3N-02030-02 LMD heterogeneity LMD_V3G9l5 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.R1.T.heterogeneity C3N-02030 UCEC RNA-Seq tumor CPT0133780076 200212_UNC31-K00269_0265_BHGCWGBBXY_CGCTATGT-TCCGACAC_S2_L001_R1_001.fastq.gz 4709238926 FASTQ NA d2e5a5ef-168b-4eee-80a3-2d7910c501b5 fa77d5dd36a6977ed864d09816d221ce NA Primary Tumor C3N-02030-02 LMD heterogeneity LMD_Y3LR00 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.R1.T.heterogeneity C3N-02030 UCEC RNA-Seq tumor CPT0133780079 200212_UNC31-K00269_0265_BHGCWGBBXY_GTATGTTC-AACAGGAA_S3_L001_R1_001.fastq.gz 4507887248 FASTQ NA 45e801c2-3bc4-4d2c-890c-772839aaf7ef 232796b9f856d0d466cd02066c402e3e NA Primary Tumor C3N-02030-02 LMD heterogeneity LMD_2KZEOJ Duplicate item: UCEC LMD Heterogeneity Pilot C3N-02030.RNA-Seq.R2.T C3N-02030 UCEC RNA-Seq tumor CPT0133770014 190604_UNC32-K00270_0177_AH7F5VBBXY_CAACAATG-CTTCACGG_S3_L001_R2_001.fastq.gz 4388626836 FASTQ NA 17857e63-90c3-4bc1-ac11-683694a6ec42 4ea6dccc93ab93ce0fa95f98244748e7 NA Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.R2.T C3N-02030 UCEC RNA-Seq tumor CPT0133780073 200212_UNC31-K00269_0265_BHGCWGBBXY_TATCGCAC-CTTAGTGT_S1_L001_R2_001.fastq.gz 5905196935 FASTQ NA 0f2b5b23-32e9-4675-84ab-85fe96dd5c94 71be54125451f4e81aab938fff150ce7 NA Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.R2.T C3N-02030 UCEC RNA-Seq tumor CPT0133780076 200212_UNC31-K00269_0265_BHGCWGBBXY_CGCTATGT-TCCGACAC_S2_L001_R2_001.fastq.gz 5336664080 FASTQ NA 2cd879a9-b2a5-4bdd-9dcb-77e006ecaff8 ff82d64811164b98b54bc2eb04db7df4 NA Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.R2.T C3N-02030 UCEC RNA-Seq tumor CPT0133780079 200212_UNC31-K00269_0265_BHGCWGBBXY_GTATGTTC-AACAGGAA_S3_L001_R2_001.fastq.gz 5086401011 FASTQ NA a7184ebc-94ac-457c-9cc9-6287d3732955 41fa1b6c88b4e837b5e35662fcae0829 NA Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.transcriptome.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760065 b7c299cf-b8e1-45b7-aa63-9a6ee1a5e28d.rna_seq.transcriptome.gdc_realn.bam 5221565020 BAM transcriptome 62bfbf10-593a-41e7-a1e8-cbb8e4b102ea 2c157b08099d4e19677c8f148b4bc701 hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.transcriptome.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760068 24bf27fc-29ff-45cf-a6ac-a3a909c85d1f.rna_seq.transcriptome.gdc_realn.bam 3467179683 BAM transcriptome 99fabc6f-e337-4802-98d0-7989dc05b4da 2bdee0ac413fc0affbc0cabaf9fc9f97 hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.transcriptome.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760071 37e56339-3a43-482e-a669-50202032c3c1.rna_seq.transcriptome.gdc_realn.bam 4953855532 BAM transcriptome 5e0526de-96c9-4632-ad57-7e9d1b8589e6 61fb152d01931b8b2258cef4cf04da90 hg38 Primary Tumor C3N-02030-02 +C3N-02030.RNA-Seq.R2.T.heterogeneity C3N-02030 UCEC RNA-Seq tumor CPT0133760065 200212_UNC31-K00269_0265_BHGCWGBBXY_TCATCCTT-AGCGAGCT_S11_L003_R2_001.fastq.gz 4293519061 FASTQ NA 80bb4040-ac35-42eb-afb0-a961027bc4de 29194e4acb96fe14894f620c9afec4ac NA Primary Tumor C3N-02030-02 LMD heterogeneity LMD_K3qAMR Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.R2.T.heterogeneity C3N-02030 UCEC RNA-Seq tumor CPT0133760068 200212_UNC31-K00269_0265_BHGCWGBBXY_AGGTTATA-CAGTTCCG_S4_L002_R2_001.fastq.gz 3948002383 FASTQ NA ca28739a-4a7e-4bf1-82f8-421b65b9be40 08c8c91c7692c9ae924a5cf646d0b411 NA Primary Tumor C3N-02030-02 LMD heterogeneity LMD_N3w7P6 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.R2.T.heterogeneity C3N-02030 UCEC RNA-Seq tumor CPT0133760071 200212_UNC31-K00269_0265_BHGCWGBBXY_GAACCGCG-TGACCTTA_S5_L002_R2_001.fastq.gz 4349735026 FASTQ NA a8d02375-61bb-4f66-b57e-b81abb4e38d4 89bea8da76d485adf118d330bca74fbb NA Primary Tumor C3N-02030-02 LMD heterogeneity LMD_Q9zAVl Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.R2.T.heterogeneity C3N-02030 UCEC RNA-Seq tumor CPT0133780073 200212_UNC31-K00269_0265_BHGCWGBBXY_TATCGCAC-CTTAGTGT_S1_L001_R2_001.fastq.gz 5905196935 FASTQ NA 0f2b5b23-32e9-4675-84ab-85fe96dd5c94 71be54125451f4e81aab938fff150ce7 NA Primary Tumor C3N-02030-02 LMD heterogeneity LMD_V3G9l5 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.R2.T.heterogeneity C3N-02030 UCEC RNA-Seq tumor CPT0133780076 200212_UNC31-K00269_0265_BHGCWGBBXY_CGCTATGT-TCCGACAC_S2_L001_R2_001.fastq.gz 5336664080 FASTQ NA 2cd879a9-b2a5-4bdd-9dcb-77e006ecaff8 ff82d64811164b98b54bc2eb04db7df4 NA Primary Tumor C3N-02030-02 LMD heterogeneity LMD_Y3LR00 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.R2.T.heterogeneity C3N-02030 UCEC RNA-Seq tumor CPT0133780079 200212_UNC31-K00269_0265_BHGCWGBBXY_GTATGTTC-AACAGGAA_S3_L001_R2_001.fastq.gz 5086401011 FASTQ NA a7184ebc-94ac-457c-9cc9-6287d3732955 41fa1b6c88b4e837b5e35662fcae0829 NA Primary Tumor C3N-02030-02 LMD heterogeneity LMD_2KZEOJ Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.transcriptome.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760065 b7c299cf-b8e1-45b7-aa63-9a6ee1a5e28d.rna_seq.transcriptome.gdc_realn.bam 5221565020 BAM transcriptome 62bfbf10-593a-41e7-a1e8-cbb8e4b102ea 2c157b08099d4e19677c8f148b4bc701 hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_K3qAMR Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.transcriptome.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760068 24bf27fc-29ff-45cf-a6ac-a3a909c85d1f.rna_seq.transcriptome.gdc_realn.bam 3467179683 BAM transcriptome 99fabc6f-e337-4802-98d0-7989dc05b4da 2bdee0ac413fc0affbc0cabaf9fc9f97 hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_N3w7P6 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.transcriptome.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133760071 37e56339-3a43-482e-a669-50202032c3c1.rna_seq.transcriptome.gdc_realn.bam 4953855532 BAM transcriptome 5e0526de-96c9-4632-ad57-7e9d1b8589e6 61fb152d01931b8b2258cef4cf04da90 hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_Q9zAVl Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.transcriptome.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780073 4daf9855-3647-4e22-a5d8-7f66a7c0f2bc.rna_seq.transcriptome.gdc_realn.bam 5371743066 BAM transcriptome 5cdfc85d-bddd-4d5e-bd71-1742e1d67d87 fed52b5f685b3662b6be8cd121d4f179 hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_V3G9l5 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.transcriptome.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780076 1bbd699a-febe-43d6-80c0-99af68a4e600.rna_seq.transcriptome.gdc_realn.bam 4227679995 BAM transcriptome 3f61c509-fd8d-49ae-b14e-a5fa81d728d9 cd51a9605296800c601e14b38ff1896e hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_Y3LR00 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.RNA-Seq.transcriptome.T.heterogeneity.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780079 648b0243-2c9c-47ce-8888-089a4bee6777.rna_seq.transcriptome.gdc_realn.bam 6779665187 BAM transcriptome f288b190-b311-4646-aa34-36620b7f67c3 63c6bfd8a3cfe29944487993e8e4c1eb hg38 Primary Tumor C3N-02030-02 LMD heterogeneity LMD_2KZEOJ Duplicate item: UCEC LMD Heterogeneity Pilot C3N-02030.RNA-Seq.transcriptome.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133770014 9432477a-520f-4ed0-8772-91d5e8b9ae2e.rna_seq.transcriptome.gdc_realn.bam 8055982747 BAM transcriptome 4ca18dfc-1840-424a-80d1-7397d47eb4f4 3f2b5e6ed8cd5f623ea712b83cea7708 hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.transcriptome.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780073 4daf9855-3647-4e22-a5d8-7f66a7c0f2bc.rna_seq.transcriptome.gdc_realn.bam 5371743066 BAM transcriptome 5cdfc85d-bddd-4d5e-bd71-1742e1d67d87 fed52b5f685b3662b6be8cd121d4f179 hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.transcriptome.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780076 1bbd699a-febe-43d6-80c0-99af68a4e600.rna_seq.transcriptome.gdc_realn.bam 4227679995 BAM transcriptome 3f61c509-fd8d-49ae-b14e-a5fa81d728d9 cd51a9605296800c601e14b38ff1896e hg38 Primary Tumor C3N-02030-02 -C3N-02030.RNA-Seq.transcriptome.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT0133780079 648b0243-2c9c-47ce-8888-089a4bee6777.rna_seq.transcriptome.gdc_realn.bam 6779665187 BAM transcriptome f288b190-b311-4646-aa34-36620b7f67c3 63c6bfd8a3cfe29944487993e8e4c1eb hg38 Primary Tumor C3N-02030-02 C3N-02030.WGS.N C3N-02030 UCEC WGS blood_normal CPT0133880002 CPT0133880002.WholeGenome.RP-1303.bam 56644630837 BAM NA 215e1766-675e-4186-aef0-49dc4822aec1 00c76a434ceffe6c0dec2e26c0a9b512 hg19 Blood Derived Normal C3N-02030-71 C3N-02030.WGS.N.hg38 C3N-02030 UCEC WGS blood_normal CPT0133880002 138b1cf0-0ac2-46d6-b211-35060de01e80_wgs_gdc_realn.bam 82771416633 BAM NA 6bef4527-ba45-445e-a6da-5b29ba4e4476 071626c6d37516519d379a17e2df418d hg38 Blood Derived Normal C3N-02030-71 -C3N-02030.WGS.T C3N-02030 UCEC WGS tumor CPT0133760076 CPT0133760076.WholeGenome.RP-2158.bam 25052943166 BAM NA 1c747cee-a357-4da4-bea9-96454dbfd420 16d8b09b2614d85f816d49047195edb0 hg19 Primary Tumor C3N-02030-01 -C3N-02030.WGS.T C3N-02030 UCEC WGS tumor CPT0133760078 CPT0133760078.WholeGenome.RP-2158.bam 17147710287 BAM NA eeab7ce9-56b8-499a-a396-0f605d09735c ba21b9972631b4ba1190190784b0d7ab hg19 Primary Tumor C3N-02030-01 -C3N-02030.WGS.T C3N-02030 UCEC WGS tumor CPT0133760080 CPT0133760080.WholeGenome.RP-2158.bam 20531550838 BAM NA 8b5f2a0d-287d-477d-9677-a3b452b10d02 1ac8fa20b65c92e02b4f5a6f1eb46be5 hg19 Primary Tumor C3N-02030-01 -C3N-02030.WGS.T C3N-02030 UCEC WGS tumor CPT0133760082 CPT0133760082.WholeGenome.RP-2158.bam 30949053164 BAM NA c77518b5-e0c8-406e-9329-07c68c7d61ca 0e1ef9b9b1fc8d9b088bc5a8aa5546fb hg19 Primary Tumor C3N-02030-01 -C3N-02030.WGS.T C3N-02030 UCEC WGS tumor CPT0133760083 CPT0133760083.WholeGenome.RP-2158.bam 15754014827 BAM NA 676124cb-fee7-4248-859d-4f94274171a8 f81b7b3094dc617f952620aad7931839 hg19 Primary Tumor C3N-02030-01 C3N-02030.WGS.T C3N-02030 UCEC WGS tumor CPT0133770011 CPT0133770011.WholeGenome.RP-1303.bam 59880248248 BAM NA 7d97bcae-e9c5-47ca-957e-5d5e6a834605 aa437a348c9f8cc1ac913cc556e07503 hg19 Primary Tumor C3N-02030-02 -C3N-02030.WGS.T C3N-02030 UCEC WGS tumor CPT0133780091 CPT0133780091.WholeGenome.RP-2158.bam 30001609723 BAM NA 72051de1-573d-43b4-b4ae-c0ab9171756e e9a381f1b2f5fb7b48b9b86c03463bca hg19 Primary Tumor C3N-02030-03 +C3N-02030.WGS.T.heterogeneity C3N-02030 UCEC WGS tumor CPT0133760076 CPT0133760076.WholeGenome.RP-2158.bam 25052943166 BAM NA 1c747cee-a357-4da4-bea9-96454dbfd420 16d8b09b2614d85f816d49047195edb0 hg19 Primary Tumor C3N-02030-01 LMD heterogeneity LMD_Y3LV4K Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.WGS.T.heterogeneity C3N-02030 UCEC WGS tumor CPT0133760078 CPT0133760078.WholeGenome.RP-2158.bam 17147710287 BAM NA eeab7ce9-56b8-499a-a396-0f605d09735c ba21b9972631b4ba1190190784b0d7ab hg19 Primary Tumor C3N-02030-01 LMD heterogeneity LMD_1JZV5R Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.WGS.T.heterogeneity C3N-02030 UCEC WGS tumor CPT0133760080 CPT0133760080.WholeGenome.RP-2158.bam 20531550838 BAM NA 8b5f2a0d-287d-477d-9677-a3b452b10d02 1ac8fa20b65c92e02b4f5a6f1eb46be5 hg19 Primary Tumor C3N-02030-01 LMD heterogeneity LMD_3L8Y7M Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.WGS.T.heterogeneity C3N-02030 UCEC WGS tumor CPT0133760082 CPT0133760082.WholeGenome.RP-2158.bam 30949053164 BAM NA c77518b5-e0c8-406e-9329-07c68c7d61ca 0e1ef9b9b1fc8d9b088bc5a8aa5546fb hg19 Primary Tumor C3N-02030-01 LMD heterogeneity LMD_5NZAjB Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.WGS.T.heterogeneity C3N-02030 UCEC WGS tumor CPT0133760083 CPT0133760083.WholeGenome.RP-2158.bam 15754014827 BAM NA 676124cb-fee7-4248-859d-4f94274171a8 f81b7b3094dc617f952620aad7931839 hg19 Primary Tumor C3N-02030-01 LMD heterogeneity LMD_6O1Ykn Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.WGS.T.heterogeneity C3N-02030 UCEC WGS tumor CPT0133780091 CPT0133780091.WholeGenome.RP-2158.bam 30001609723 BAM NA 72051de1-573d-43b4-b4ae-c0ab9171756e e9a381f1b2f5fb7b48b9b86c03463bca hg19 Primary Tumor C3N-02030-03 LMD heterogeneity LMD_lrwPDl Duplicate item: UCEC LMD Heterogeneity Pilot C3N-02030.WGS.T.hg38 C3N-02030 UCEC WGS tumor CPT0133770011 a81443de-b861-4bb8-ab23-501062de441f_wgs_gdc_realn.bam 87668734945 BAM NA 25031dfb-de49-4bc5-8937-907f5399c3de 5226a1c8942ef3bb377eb9b099fe3520 hg38 Primary Tumor C3N-02030-02 C3N-02030.WXS.N C3N-02030 UCEC WXS blood_normal CPT0133880002 CPT0133880002.WholeExome.RP-1303.bam 21961864056 BAM NA 9b6ee954-1b61-4dfa-8614-456190fc1cc9 6e87e613b1f8f26ff0c00341dc6b0a80 hg19 Blood Derived Normal C3N-02030-71 C3N-02030.WXS.N.hg38 C3N-02030 UCEC WXS blood_normal CPT0133880002 138b1cf0-0ac2-46d6-b211-35060de01e80_wxs_gdc_realn.bam 29542764494 BAM NA c7442e46-9519-440d-b825-b49991b0afd2 afa84aa7ee2175e4fad9d4dd4796f77c hg38 Blood Derived Normal C3N-02030-71 -C3N-02030.WXS.T C3N-02030 UCEC WXS tumor CPT0133760076 CPT0133760076.WholeExome.RP-1303.bam 29426464494 BAM NA 249d3a65-6ae3-4c88-a18e-574a63822f58 86764c18b30299620b9aefb171dbc1a7 hg19 Primary Tumor C3N-02030-01 -C3N-02030.WXS.T C3N-02030 UCEC WXS tumor CPT0133760078 CPT0133760078.WholeExome.RP-1303.bam 23013761461 BAM NA ddeb3e8e-7e76-4413-8a5b-e3dbc9cc8911 e73b57883766bfe2bb23b02de432166f hg19 Primary Tumor C3N-02030-01 -C3N-02030.WXS.T C3N-02030 UCEC WXS tumor CPT0133760080 CPT0133760080.WholeExome.RP-1303.bam 21734675192 BAM NA 8c04ed46-6362-4319-993d-9dbe7a71a969 5f83fc420bacb035468057a809ebc481 hg19 Primary Tumor C3N-02030-01 -C3N-02030.WXS.T C3N-02030 UCEC WXS tumor CPT0133760081 CPT0133760081.WholeExome.RP-1303.bam 18755430222 BAM NA f1b0758b-aee9-4452-ac1b-0078fd3c2b75 b1f3976bd734a98860ea5c127e98bc94 hg19 Primary Tumor C3N-02030-01 -C3N-02030.WXS.T C3N-02030 UCEC WXS tumor CPT0133760082 CPT0133760082.WholeExome.RP-1303.bam 25220285181 BAM NA ac1f0679-c216-42e3-b30d-94708066bdd6 76c4a7268eed2916e9e6b6ff48ae997e hg19 Primary Tumor C3N-02030-01 -C3N-02030.WXS.T C3N-02030 UCEC WXS tumor CPT0133760083 CPT0133760083.WholeExome.RP-1303.bam 21284909798 BAM NA 4b4e95a9-140a-44b3-aade-d1b94252bba5 787b468e1163db4a2db86f6a5bfa6cbb hg19 Primary Tumor C3N-02030-01 C3N-02030.WXS.T C3N-02030 UCEC WXS tumor CPT0133770011 CPT0133770011.WholeExome.RP-1303.bam 26277217133 BAM NA 9eb871bc-f6e1-4ded-ba2c-e208a32b0220 bdd33fa830733cff58f5f4f6ccf30b2e hg19 Primary Tumor C3N-02030-02 -C3N-02030.WXS.T C3N-02030 UCEC WXS tumor CPT0133780085 CPT0133780085.WholeExome.RP-1303.bam 21577329994 BAM NA dca9eda1-806d-4914-80df-806beca61919 f59507d0fad331a7800f51f02163463a hg19 Primary Tumor C3N-02030-03 -C3N-02030.WXS.T C3N-02030 UCEC WXS tumor CPT0133780087 CPT0133780087.WholeExome.RP-1303.bam 24860634954 BAM NA 080a9922-fb39-4838-ad16-6f68c827f3e6 405ef118010316043ad76ab7630524bd hg19 Primary Tumor C3N-02030-03 -C3N-02030.WXS.T C3N-02030 UCEC WXS tumor CPT0133780089 CPT0133780089.WholeExome.RP-1303.bam 25266670340 BAM NA 83932d96-4b3d-4005-a5e5-c01745ca1d73 333483b5d6760d2b138233657fde8e52 hg19 Primary Tumor C3N-02030-03 -C3N-02030.WXS.T C3N-02030 UCEC WXS tumor CPT0133780090 CPT0133780090.WholeExome.RP-1303.bam 30268747107 BAM NA 3480f6d3-ab17-4ee8-891f-f19e29693499 26c51e36419e541adb2e5b506fe22498 hg19 Primary Tumor C3N-02030-03 -C3N-02030.WXS.T C3N-02030 UCEC WXS tumor CPT0133780091 CPT0133780091.WholeExome.RP-1303.bam 20663772908 BAM NA 7ed3de68-efac-4557-a0df-9e47e12dbeae 8bcda8434ac6a139f2c8a3d6e2e0f71c hg19 Primary Tumor C3N-02030-03 -C3N-02030.WXS.T C3N-02030 UCEC WXS tumor CPT0133780092 CPT0133780092.WholeExome.RP-1303.bam 15210456768 BAM NA c234274d-e4af-4984-90a2-2e6e94b86c4f 349cd260d0f7511efd2b791bc2c9ebe9 hg19 Primary Tumor C3N-02030-03 +C3N-02030.WXS.T.heterogeneity C3N-02030 UCEC WXS tumor CPT0133760076 CPT0133760076.WholeExome.RP-1303.bam 29426464494 BAM NA 249d3a65-6ae3-4c88-a18e-574a63822f58 86764c18b30299620b9aefb171dbc1a7 hg19 Primary Tumor C3N-02030-01 LMD heterogeneity LMD_Y3LV4K Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.WXS.T.heterogeneity C3N-02030 UCEC WXS tumor CPT0133760078 CPT0133760078.WholeExome.RP-1303.bam 23013761461 BAM NA ddeb3e8e-7e76-4413-8a5b-e3dbc9cc8911 e73b57883766bfe2bb23b02de432166f hg19 Primary Tumor C3N-02030-01 LMD heterogeneity LMD_1JZV5R Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.WXS.T.heterogeneity C3N-02030 UCEC WXS tumor CPT0133760080 CPT0133760080.WholeExome.RP-1303.bam 21734675192 BAM NA 8c04ed46-6362-4319-993d-9dbe7a71a969 5f83fc420bacb035468057a809ebc481 hg19 Primary Tumor C3N-02030-01 LMD heterogeneity LMD_3L8Y7M Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.WXS.T.heterogeneity C3N-02030 UCEC WXS tumor CPT0133760081 CPT0133760081.WholeExome.RP-1303.bam 18755430222 BAM NA f1b0758b-aee9-4452-ac1b-0078fd3c2b75 b1f3976bd734a98860ea5c127e98bc94 hg19 Primary Tumor C3N-02030-01 LMD heterogeneity LMD_4MZWg1 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.WXS.T.heterogeneity C3N-02030 UCEC WXS tumor CPT0133760082 CPT0133760082.WholeExome.RP-1303.bam 25220285181 BAM NA ac1f0679-c216-42e3-b30d-94708066bdd6 76c4a7268eed2916e9e6b6ff48ae997e hg19 Primary Tumor C3N-02030-01 LMD heterogeneity LMD_5NZAjB Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.WXS.T.heterogeneity C3N-02030 UCEC WXS tumor CPT0133760083 CPT0133760083.WholeExome.RP-1303.bam 21284909798 BAM NA 4b4e95a9-140a-44b3-aade-d1b94252bba5 787b468e1163db4a2db86f6a5bfa6cbb hg19 Primary Tumor C3N-02030-01 LMD heterogeneity LMD_6O1Ykn Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.WXS.T.heterogeneity C3N-02030 UCEC WXS tumor CPT0133780085 CPT0133780085.WholeExome.RP-1303.bam 21577329994 BAM NA dca9eda1-806d-4914-80df-806beca61919 f59507d0fad331a7800f51f02163463a hg19 Primary Tumor C3N-02030-03 LMD heterogeneity LMD_8QZlOl Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.WXS.T.heterogeneity C3N-02030 UCEC WXS tumor CPT0133780087 CPT0133780087.WholeExome.RP-1303.bam 24860634954 BAM NA 080a9922-fb39-4838-ad16-6f68c827f3e6 405ef118010316043ad76ab7630524bd hg19 Primary Tumor C3N-02030-03 LMD heterogeneity LMD_0GZBO7 Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.WXS.T.heterogeneity C3N-02030 UCEC WXS tumor CPT0133780089 CPT0133780089.WholeExome.RP-1303.bam 25266670340 BAM NA 83932d96-4b3d-4005-a5e5-c01745ca1d73 333483b5d6760d2b138233657fde8e52 hg19 Primary Tumor C3N-02030-03 LMD heterogeneity LMD_jprPLW Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.WXS.T.heterogeneity C3N-02030 UCEC WXS tumor CPT0133780090 CPT0133780090.WholeExome.RP-1303.bam 30268747107 BAM NA 3480f6d3-ab17-4ee8-891f-f19e29693499 26c51e36419e541adb2e5b506fe22498 hg19 Primary Tumor C3N-02030-03 LMD heterogeneity LMD_kqvPDx Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.WXS.T.heterogeneity C3N-02030 UCEC WXS tumor CPT0133780091 CPT0133780091.WholeExome.RP-1303.bam 20663772908 BAM NA 7ed3de68-efac-4557-a0df-9e47e12dbeae 8bcda8434ac6a139f2c8a3d6e2e0f71c hg19 Primary Tumor C3N-02030-03 LMD heterogeneity LMD_lrwPDl Duplicate item: UCEC LMD Heterogeneity Pilot +C3N-02030.WXS.T.heterogeneity C3N-02030 UCEC WXS tumor CPT0133780092 CPT0133780092.WholeExome.RP-1303.bam 15210456768 BAM NA c234274d-e4af-4984-90a2-2e6e94b86c4f 349cd260d0f7511efd2b791bc2c9ebe9 hg19 Primary Tumor C3N-02030-03 LMD heterogeneity LMD_mvxPGp Duplicate item: UCEC LMD Heterogeneity Pilot C3N-02030.WXS.T.hg38 C3N-02030 UCEC WXS tumor CPT0133770011 a81443de-b861-4bb8-ab23-501062de441f_wxs_gdc_realn.bam 37279872369 BAM NA 439aba9f-6e4b-45c4-ba30-785dabaf1d23 0a6a7483b050e7be7b1e7c0046a9f408 hg38 Primary Tumor C3N-02030-02 C3N-02034.MethArray.Green.T C3N-02034 SAR Methylation Array tumor CPT0099340009 202234380102_R07C01_Grn.idat 13676231 IDAT Green 5650da79-1595-4e52-95b5-12a583be3996 9ac482c1602c1783b3efa927d312cc43 NA Primary Tumor C3N-02034-02 C3N-02034.MethArray.Red.T C3N-02034 SAR Methylation Array tumor CPT0099340009 202234380102_R07C01_Red.idat 13676231 IDAT Red 6487de03-233e-4220-8488-c1c6f7062b4c 34335e39527c3ff108d966b3e34a2aac NA Primary Tumor C3N-02034-02 @@ -27720,8 +27738,8 @@ C3N-02589.WXS.N C3N-02589 PDA WXS blood_normal CPT0162700002 CPT0162700002.Whole C3N-02589.WXS.N.hg38 C3N-02589 PDA WXS blood_normal CPT0162700002 66637cfa-407a-4d07-abc6-5ed16df0ddc4_wxs_gdc_realn.bam 34721742561 BAM NA 9b1b16ca-4dba-4f0f-a4b0-16588c3d3d05 c2dd5d70b2a3cddda8e7dce7d33507a6 hg38 Blood Derived Normal C3N-02589-31 C3N-02589.WXS.T.hg38.high_cov C3N-02589 PDA WXS tumor CPT0162660007 caf681d2-5806-4cfe-994c-6466c2908f86_wxs_gdc_realn.bam 41965499075 BAM NA 72f2dee6-e7fb-429b-a5b0-68230437f99b b5f88553431dc9f545b2faefad4a94f6 hg38 Primary Tumor C3N-02589-01 .high_cov C3N-02589.WXS.T.high_cov C3N-02589 PDA WXS tumor CPT0162660007 CPT0162660007.WholeExome.RP-1303.bam 30236393735 BAM NA 84611962-0e51-4c1e-80a5-8b089da4c70f 7d0937e238e1c37209600463c186ad6d hg19 Primary Tumor C3N-02589-01 .high_cov -C3N-02590.MethArray.Green.T.core C3N-02590 PDA Methylation Array tumor CPT0187590020 203561450054_R03C01_Grn.idat 13676216 IDAT Green e88d2890-28b0-47b5-aaa0-6256ecc28953 427b6845ba56b90f8cca75c971a76c5e NA Primary Tumor C3N-02590-01 .core -C3N-02590.MethArray.Red.T.core C3N-02590 PDA Methylation Array tumor CPT0187590020 203561450054_R03C01_Red.idat 13676216 IDAT Red 4280fa37-718d-463a-a423-bf2a0a2e2052 d67c7a265bf794f1ad9e425356b2a252 NA Primary Tumor C3N-02590-01 .core +C3N-02590.MethArray.Green.T.CORE_J6NZQw9.core C3N-02590 PDA Methylation Array tumor CPT0187590020 203561450054_R03C01_Grn.idat 13676216 IDAT Green e88d2890-28b0-47b5-aaa0-6256ecc28953 427b6845ba56b90f8cca75c971a76c5e NA Primary Tumor C3N-02590-01 .core core_DNA CORE_J6NZQw9 Duplicate item: PDA Pilot - core-derived DNA +C3N-02590.MethArray.Red.T.CORE_J6NZQw9.core C3N-02590 PDA Methylation Array tumor CPT0187590020 203561450054_R03C01_Red.idat 13676216 IDAT Red 4280fa37-718d-463a-a423-bf2a0a2e2052 d67c7a265bf794f1ad9e425356b2a252 NA Primary Tumor C3N-02590-01 .core core_DNA CORE_J6NZQw9 Duplicate item: PDA Pilot - core-derived DNA C3N-02590.miRNA-Seq.T C3N-02590 PDA miRNA-Seq tumor CPT0187590016 190108_UNC31-K00269_0176_AHYGLVBBXX_GCCAAT_S6_L002_R1_001.unaln.bam 225584374 BAM NA 4975d966-ffab-4a24-a2ea-e7f67761bde0 1493104f346b5a308274ab660129bf3f NA Primary Tumor C3N-02590-01 C3N-02590.miRNA-Seq.T.hg38 C3N-02590 PDA miRNA-Seq tumor CPT0187590016 67b9fc7b-0477-494e-a59c-e3e905bb245a_mirnaseq_gdc_realn.bam 253829316 BAM NA e5ae3251-d1d6-4ca4-929f-f8bf263ab367 9452c50eb12c6e104ae4101963b04e2f hg38 Primary Tumor C3N-02590-01 C3N-02590.RNA-Seq.chimeric.T.hg38 C3N-02590 PDA RNA-Seq tumor CPT0187590016 80e3a050-17e6-404a-adec-7674760b03d2.rna_seq.chimeric.gdc_realn.bam 9486077 BAM chimeric d4d1ba91-9e1a-40e1-9ebb-7800ffb8c9f5 66350bbe68505e5578abf65da10f7746 hg38 Primary Tumor C3N-02590-01 @@ -27731,32 +27749,32 @@ C3N-02590.RNA-Seq.R2.T C3N-02590 PDA RNA-Seq tumor CPT0187590016 190115_UNC31-K0 C3N-02590.RNA-Seq.transcriptome.T.hg38 C3N-02590 PDA RNA-Seq tumor CPT0187590016 80e3a050-17e6-404a-adec-7674760b03d2.rna_seq.transcriptome.gdc_realn.bam 6763582791 BAM transcriptome 7de231ea-13b5-4eef-ae79-886ab3f5ed9e b83fca96f4e0b584d568331bb57d50be hg38 Primary Tumor C3N-02590-01 C3N-02590.WGS.N C3N-02590 PDA WGS blood_normal CPT0187630002 CPT0187630002.WholeGenome.RP-1303.bam 62669268624 BAM NA a7bdad43-f3fd-4058-a78a-34ef34bd3acd 6802686f28caa189549b0c9b8ebb0af3 hg19 Blood Derived Normal C3N-02590-31 C3N-02590.WGS.N.hg38 C3N-02590 PDA WGS blood_normal CPT0187630002 ade0461b-bf5a-4f6c-8fee-09d43580e9c8_wgs_gdc_realn.bam 90540505781 BAM NA dd10fbb1-dccd-4561-a48b-1ee485a78bef 5b04ef022e8fd357c59c9bd9b6583886 hg38 Blood Derived Normal C3N-02590-31 -C3N-02590.WGS.T C3N-02590 PDA WGS tumor CPT0187590026 CPT0187590026.WholeGenome.RP-1303.bam 139778751639 BAM NA 02b393f0-a988-43df-97c0-4008606bf13f d5ac8920b0947e65f5f4d19f627a0bc3 hg19 Primary Tumor C3N-02590-01 -C3N-02590.WGS.T.core C3N-02590 PDA WGS tumor CPT0187590020 CPT0187590020.WholeGenome.RP-1303.bam 57496710292 BAM NA 685b3bb8-cb6e-41ca-954f-7bdf1d5687c7 4434546841e4c9ba4bf079daaf509415 hg19 Primary Tumor C3N-02590-01 .core -C3N-02590.WGS.T.hg38 C3N-02590 PDA WGS tumor CPT0187590026 aa022931-97a5-4a8f-89f0-6acbd1d6fc6c_wgs_gdc_realn.bam 203126922195 BAM NA 15cdcb37-01df-4016-810b-acf610bf26d0 247a7c5fd7a41d00f0a5f5fcf44f03b0 hg38 Primary Tumor C3N-02590-01 -C3N-02590.WGS.T.hg38.core C3N-02590 PDA WGS tumor CPT0187590020 66cd1789-c1cf-4b80-aa3b-76081ab0ea54_wgs_gdc_realn.bam 83690866151 BAM NA 8682ed8c-0406-48a5-9ba9-30b1e0e7958b 922b6f093d76764f59555ec05e2fca57 hg38 Primary Tumor C3N-02590-01 .core +C3N-02590.WGS.T.BULK_PNz1QDy C3N-02590 PDA WGS tumor CPT0187590026 CPT0187590026.WholeGenome.RP-1303.bam 139778751639 BAM NA 02b393f0-a988-43df-97c0-4008606bf13f d5ac8920b0947e65f5f4d19f627a0bc3 hg19 Primary Tumor C3N-02590-01 bulk_DNA BULK_PNz1QDy Duplicate item: PDA Pilot - bulk-derived DNA +C3N-02590.WGS.T.BULK_PNz1QDy.hg38 C3N-02590 PDA WGS tumor CPT0187590026 aa022931-97a5-4a8f-89f0-6acbd1d6fc6c_wgs_gdc_realn.bam 203126922195 BAM NA 15cdcb37-01df-4016-810b-acf610bf26d0 247a7c5fd7a41d00f0a5f5fcf44f03b0 hg38 Primary Tumor C3N-02590-01 bulk_DNA BULK_PNz1QDy Duplicate item: PDA Pilot - bulk-derived DNA +C3N-02590.WGS.T.CORE_J6NZQw9.core C3N-02590 PDA WGS tumor CPT0187590020 CPT0187590020.WholeGenome.RP-1303.bam 57496710292 BAM NA 685b3bb8-cb6e-41ca-954f-7bdf1d5687c7 4434546841e4c9ba4bf079daaf509415 hg19 Primary Tumor C3N-02590-01 .core core_DNA CORE_J6NZQw9 Duplicate item: PDA Pilot - core-derived DNA +C3N-02590.WGS.T.CORE_J6NZQw9.hg38.core C3N-02590 PDA WGS tumor CPT0187590020 66cd1789-c1cf-4b80-aa3b-76081ab0ea54_wgs_gdc_realn.bam 83690866151 BAM NA 8682ed8c-0406-48a5-9ba9-30b1e0e7958b 922b6f093d76764f59555ec05e2fca57 hg38 Primary Tumor C3N-02590-01 .core core_DNA CORE_J6NZQw9 Duplicate item: PDA Pilot - core-derived DNA C3N-02590.WXS.N C3N-02590 PDA WXS blood_normal CPT0187630002 CPT0187630002.WholeExome.RP-1303.bam 30121240731 BAM NA 39604754-f3a4-46a6-901c-1b2d667ad74a 462a28ae64ecc7220868575add828de9 hg19 Blood Derived Normal C3N-02590-31 C3N-02590.WXS.N.hg38 C3N-02590 PDA WXS blood_normal CPT0187630002 ade0461b-bf5a-4f6c-8fee-09d43580e9c8_wxs_gdc_realn.bam 41090038552 BAM NA a0da46e0-ff1f-4434-997e-68947453421b a2fdf758635ad432f3b799382fe96992 hg38 Blood Derived Normal C3N-02590-31 -C3N-02590.WXS.T.core.high_cov C3N-02590 PDA WXS tumor CPT0187590020 CPT0187590020.WholeExome.RP-1303.bam 63041283424 BAM NA 08dfed58-87d9-40c9-bddb-7591263acf11 e857bddcb895a58fe8fd3555765a62ef hg19 Primary Tumor C3N-02590-01 .core.high_cov -C3N-02590.WXS.T.hg38.core.high_cov C3N-02590 PDA WXS tumor CPT0187590020 66cd1789-c1cf-4b80-aa3b-76081ab0ea54_wxs_gdc_realn.bam 86827491680 BAM NA 60d3161a-5889-4f09-8a1f-5c02d20c4b15 c42f4cd4a9a0b7dfdbc1a5f530696ea3 hg38 Primary Tumor C3N-02590-01 .core.high_cov -C3N-02590.WXS.T.hg38.high_cov C3N-02590 PDA WXS tumor CPT0187590026 aa022931-97a5-4a8f-89f0-6acbd1d6fc6c_wxs_gdc_realn.bam 71035417727 BAM NA 28c76065-6382-4508-b859-3260f21669b5 57c9b435adbb8c81134a1774c2138cfc hg38 Primary Tumor C3N-02590-01 .high_cov -C3N-02590.WXS.T.high_cov C3N-02590 PDA WXS tumor CPT0187590026 CPT0187590026.WholeExome.RP-1303.bam 50413514189 BAM NA 9d9f8dc0-4476-43eb-a68a-c56559689ec9 5b50bffef5596f44cdec4372c0a79e21 hg19 Primary Tumor C3N-02590-01 .high_cov -C3N-02591.MethArray.Green.T C3N-02591 PDA Methylation Array tumor CPT0162710034 203561450046_R01C01_Grn.idat 13676211 IDAT Green 7b9ccc62-9004-4c66-ae37-6c59f001ddad d80ca16e339d9276a9743b34a47f7ade NA Primary Tumor C3N-02591-01 -C3N-02591.MethArray.Green.T.core C3N-02591 PDA Methylation Array tumor CPT0162710028 203561620080_R01C01_Grn.idat 13676226 IDAT Green 89bbbd5e-8f2b-4a2d-99dd-4114715f6756 0c54beee98ca88d971238ec599c7a067 NA Primary Tumor C3N-02591-01 .core -C3N-02591.MethArray.Red.T C3N-02591 PDA Methylation Array tumor CPT0162710034 203561450046_R01C01_Red.idat 13676211 IDAT Red 2ad2b5ba-1ec6-4399-ae61-5ebceca78583 0f35a41c9c73df91d9245926a6ccdd1e NA Primary Tumor C3N-02591-01 -C3N-02591.MethArray.Red.T.core C3N-02591 PDA Methylation Array tumor CPT0162710028 203561620080_R01C01_Red.idat 13676226 IDAT Red ce7fd8cf-705f-4a47-af11-c7cf87f6039a 2366572d0388bfe989bb0c83cb7f8009 NA Primary Tumor C3N-02591-01 .core +C3N-02590.WXS.T.BULK_PNz1QDy.hg38.high_cov C3N-02590 PDA WXS tumor CPT0187590026 aa022931-97a5-4a8f-89f0-6acbd1d6fc6c_wxs_gdc_realn.bam 71035417727 BAM NA 28c76065-6382-4508-b859-3260f21669b5 57c9b435adbb8c81134a1774c2138cfc hg38 Primary Tumor C3N-02590-01 .high_cov bulk_DNA BULK_PNz1QDy Duplicate item: PDA Pilot - bulk-derived DNA +C3N-02590.WXS.T.BULK_PNz1QDy.high_cov C3N-02590 PDA WXS tumor CPT0187590026 CPT0187590026.WholeExome.RP-1303.bam 50413514189 BAM NA 9d9f8dc0-4476-43eb-a68a-c56559689ec9 5b50bffef5596f44cdec4372c0a79e21 hg19 Primary Tumor C3N-02590-01 .high_cov bulk_DNA BULK_PNz1QDy Duplicate item: PDA Pilot - bulk-derived DNA +C3N-02590.WXS.T.CORE_J6NZQw9.core.high_cov C3N-02590 PDA WXS tumor CPT0187590020 CPT0187590020.WholeExome.RP-1303.bam 63041283424 BAM NA 08dfed58-87d9-40c9-bddb-7591263acf11 e857bddcb895a58fe8fd3555765a62ef hg19 Primary Tumor C3N-02590-01 .core.high_cov core_DNA CORE_J6NZQw9 Duplicate item: PDA Pilot - core-derived DNA +C3N-02590.WXS.T.CORE_J6NZQw9.hg38.core.high_cov C3N-02590 PDA WXS tumor CPT0187590020 66cd1789-c1cf-4b80-aa3b-76081ab0ea54_wxs_gdc_realn.bam 86827491680 BAM NA 60d3161a-5889-4f09-8a1f-5c02d20c4b15 c42f4cd4a9a0b7dfdbc1a5f530696ea3 hg38 Primary Tumor C3N-02590-01 .core.high_cov core_DNA CORE_J6NZQw9 Duplicate item: PDA Pilot - core-derived DNA +C3N-02591.MethArray.Green.T.BULK_1xqWz3 C3N-02591 PDA Methylation Array tumor CPT0162710034 203561450046_R01C01_Grn.idat 13676211 IDAT Green 7b9ccc62-9004-4c66-ae37-6c59f001ddad d80ca16e339d9276a9743b34a47f7ade NA Primary Tumor C3N-02591-01 bulk_DNA BULK_1xqWz3 Duplicate item: PDA Pilot - bulk-derived DNA +C3N-02591.MethArray.Green.T.CORE_R2nOrL.core C3N-02591 PDA Methylation Array tumor CPT0162710028 203561620080_R01C01_Grn.idat 13676226 IDAT Green 89bbbd5e-8f2b-4a2d-99dd-4114715f6756 0c54beee98ca88d971238ec599c7a067 NA Primary Tumor C3N-02591-01 .core core_DNA CORE_R2nOrL Duplicate item: PDA Pilot - core-derived DNA +C3N-02591.MethArray.Red.T.BULK_1xqWz3 C3N-02591 PDA Methylation Array tumor CPT0162710034 203561450046_R01C01_Red.idat 13676211 IDAT Red 2ad2b5ba-1ec6-4399-ae61-5ebceca78583 0f35a41c9c73df91d9245926a6ccdd1e NA Primary Tumor C3N-02591-01 bulk_DNA BULK_1xqWz3 Duplicate item: PDA Pilot - bulk-derived DNA +C3N-02591.MethArray.Red.T.CORE_R2nOrL.core C3N-02591 PDA Methylation Array tumor CPT0162710028 203561620080_R01C01_Red.idat 13676226 IDAT Red ce7fd8cf-705f-4a47-af11-c7cf87f6039a 2366572d0388bfe989bb0c83cb7f8009 NA Primary Tumor C3N-02591-01 .core core_DNA CORE_R2nOrL Duplicate item: PDA Pilot - core-derived DNA C3N-02591.WGS.N C3N-02591 PDA WGS blood_normal CPT0162750002 CPT0162750002.WholeGenome.RP-1303.bam 77541630186 BAM NA aaefd7be-c9cd-4dbe-8671-ed4a0951ae45 0046ad6ed1cf0338c04b248f73ae9e1a hg19 Blood Derived Normal C3N-02591-31 C3N-02591.WGS.N.hg38 C3N-02591 PDA WGS blood_normal CPT0162750002 4968424c-2b02-4d69-92ca-6216433228ac_wgs_gdc_realn.bam 112329969836 BAM NA af83a17a-141b-4f96-98fc-2b709c558b90 d421ed2e5920acc388e67ac501e00e6e hg38 Blood Derived Normal C3N-02591-31 -C3N-02591.WGS.T C3N-02591 PDA WGS tumor CPT0162710034 CPT0162710034.WholeGenome.RP-1303.bam 127937314211 BAM NA 545bc3ff-09be-41db-a68e-68742b7d39e5 793236f29c0dffaf757fd4a10da4b79e hg19 Primary Tumor C3N-02591-01 -C3N-02591.WGS.T.core C3N-02591 PDA WGS tumor CPT0162710028 CPT0162710028.WholeGenome.RP-1303.bam 113490519072 BAM NA 4645829a-6698-4b8d-841b-a0517e75aa9e 42b5a34e304e4ebd3e84a3dae7b2b356 hg19 Primary Tumor C3N-02591-01 .core -C3N-02591.WGS.T.hg38 C3N-02591 PDA WGS tumor CPT0162710034 c62bcb6f-642a-42a2-a715-d7962bb7f8bc_wgs_gdc_realn.bam 183625036297 BAM NA a52e3367-f8e9-465c-9912-6bcd91e2518b a7079b674de659efabc5cb1657b08798 hg38 Primary Tumor C3N-02591-01 -C3N-02591.WGS.T.hg38.core C3N-02591 PDA WGS tumor CPT0162710028 ac04ab66-7985-49f7-b93c-15543bedc183_wgs_gdc_realn.bam 164522380568 BAM NA 1b64353e-c790-4243-8abf-8c0daa45fc52 2c2a2518395f7a585dd532d7e25cac52 hg38 Primary Tumor C3N-02591-01 .core +C3N-02591.WGS.T.BULK_1xqWz3 C3N-02591 PDA WGS tumor CPT0162710034 CPT0162710034.WholeGenome.RP-1303.bam 127937314211 BAM NA 545bc3ff-09be-41db-a68e-68742b7d39e5 793236f29c0dffaf757fd4a10da4b79e hg19 Primary Tumor C3N-02591-01 bulk_DNA BULK_1xqWz3 Duplicate item: PDA Pilot - bulk-derived DNA +C3N-02591.WGS.T.BULK_1xqWz3.hg38 C3N-02591 PDA WGS tumor CPT0162710034 c62bcb6f-642a-42a2-a715-d7962bb7f8bc_wgs_gdc_realn.bam 183625036297 BAM NA a52e3367-f8e9-465c-9912-6bcd91e2518b a7079b674de659efabc5cb1657b08798 hg38 Primary Tumor C3N-02591-01 bulk_DNA BULK_1xqWz3 Duplicate item: PDA Pilot - bulk-derived DNA +C3N-02591.WGS.T.CORE_R2nOrL.core C3N-02591 PDA WGS tumor CPT0162710028 CPT0162710028.WholeGenome.RP-1303.bam 113490519072 BAM NA 4645829a-6698-4b8d-841b-a0517e75aa9e 42b5a34e304e4ebd3e84a3dae7b2b356 hg19 Primary Tumor C3N-02591-01 .core core_DNA CORE_R2nOrL Duplicate item: PDA Pilot - core-derived DNA +C3N-02591.WGS.T.CORE_R2nOrL.hg38.core C3N-02591 PDA WGS tumor CPT0162710028 ac04ab66-7985-49f7-b93c-15543bedc183_wgs_gdc_realn.bam 164522380568 BAM NA 1b64353e-c790-4243-8abf-8c0daa45fc52 2c2a2518395f7a585dd532d7e25cac52 hg38 Primary Tumor C3N-02591-01 .core core_DNA CORE_R2nOrL Duplicate item: PDA Pilot - core-derived DNA C3N-02591.WXS.N C3N-02591 PDA WXS blood_normal CPT0162750002 CPT0162750002.WholeExome.RP-1303.bam 25610717920 BAM NA 6f0f0dc2-b00d-4440-ba17-47c28396d9eb 9fb9672db674a0ab8b8a1680c8a00859 hg19 Blood Derived Normal C3N-02591-31 C3N-02591.WXS.N.hg38 C3N-02591 PDA WXS blood_normal CPT0162750002 4968424c-2b02-4d69-92ca-6216433228ac_wxs_gdc_realn.bam 35122427782 BAM NA 2ac0e90d-c37c-4044-aa66-74caed82b248 2fd2650f90e27884e462d4d3a2c09c67 hg38 Blood Derived Normal C3N-02591-31 -C3N-02591.WXS.T.core.high_cov C3N-02591 PDA WXS tumor CPT0162710028 CPT0162710028.WholeExome.RP-1303.bam 54648593175 BAM NA 967859b6-b9ba-4f0a-bd76-172bf914bca1 7721d00df8535dab68583a4740ba1799 hg19 Primary Tumor C3N-02591-01 .core.high_cov -C3N-02591.WXS.T.hg38.core.high_cov C3N-02591 PDA WXS tumor CPT0162710028 ac04ab66-7985-49f7-b93c-15543bedc183_wxs_gdc_realn.bam 77193314643 BAM NA 43299d09-3a6a-4682-ab39-4a2396d6f71c a38eaa48bac8344a9ca7c04be4d8aba2 hg38 Primary Tumor C3N-02591-01 .core.high_cov -C3N-02591.WXS.T.hg38.high_cov C3N-02591 PDA WXS tumor CPT0162710034 c62bcb6f-642a-42a2-a715-d7962bb7f8bc_wxs_gdc_realn.bam 68185993871 BAM NA faefc7e3-98d6-4018-af5f-9674ffdf8c23 5f66cc1a899bb2316575d41d2a3421a3 hg38 Primary Tumor C3N-02591-01 .high_cov -C3N-02591.WXS.T.high_cov C3N-02591 PDA WXS tumor CPT0162710034 CPT0162710034.WholeExome.RP-1303.bam 48349896562 BAM NA f97ddea4-e55c-4caa-b712-1603730df0e4 5c9ae41358fd5064fccba09728570faf hg19 Primary Tumor C3N-02591-01 .high_cov +C3N-02591.WXS.T.BULK_1xqWz3.hg38.high_cov C3N-02591 PDA WXS tumor CPT0162710034 c62bcb6f-642a-42a2-a715-d7962bb7f8bc_wxs_gdc_realn.bam 68185993871 BAM NA faefc7e3-98d6-4018-af5f-9674ffdf8c23 5f66cc1a899bb2316575d41d2a3421a3 hg38 Primary Tumor C3N-02591-01 .high_cov bulk_DNA BULK_1xqWz3 Duplicate item: PDA Pilot - bulk-derived DNA +C3N-02591.WXS.T.BULK_1xqWz3.high_cov C3N-02591 PDA WXS tumor CPT0162710034 CPT0162710034.WholeExome.RP-1303.bam 48349896562 BAM NA f97ddea4-e55c-4caa-b712-1603730df0e4 5c9ae41358fd5064fccba09728570faf hg19 Primary Tumor C3N-02591-01 .high_cov bulk_DNA BULK_1xqWz3 Duplicate item: PDA Pilot - bulk-derived DNA +C3N-02591.WXS.T.CORE_R2nOrL.core.high_cov C3N-02591 PDA WXS tumor CPT0162710028 CPT0162710028.WholeExome.RP-1303.bam 54648593175 BAM NA 967859b6-b9ba-4f0a-bd76-172bf914bca1 7721d00df8535dab68583a4740ba1799 hg19 Primary Tumor C3N-02591-01 .core.high_cov core_DNA CORE_R2nOrL Duplicate item: PDA Pilot - core-derived DNA +C3N-02591.WXS.T.CORE_R2nOrL.hg38.core.high_cov C3N-02591 PDA WXS tumor CPT0162710028 ac04ab66-7985-49f7-b93c-15543bedc183_wxs_gdc_realn.bam 77193314643 BAM NA 43299d09-3a6a-4682-ab39-4a2396d6f71c a38eaa48bac8344a9ca7c04be4d8aba2 hg38 Primary Tumor C3N-02591-01 .core.high_cov core_DNA CORE_R2nOrL Duplicate item: PDA Pilot - core-derived DNA C3N-02592.MethArray.Green.T C3N-02592 PDA Methylation Array tumor CPT0162760006 203273630258_R01C01_Grn.idat 13676231 IDAT Green 8c2f67c5-a2ed-43c6-8617-4c42e766ad4b f728cb3269859f1357004f10acbd33b2 NA Primary Tumor C3N-02592-01 C3N-02592.MethArray.Red.T C3N-02592 PDA Methylation Array tumor CPT0162760006 203273630258_R01C01_Red.idat 13676231 IDAT Red 5a769678-cc53-47bc-b14c-df7eccd9d3ba 908be99562d62990611b8f61f7784786 NA Primary Tumor C3N-02592-01 C3N-02592.miRNA-Seq.T C3N-02592 PDA miRNA-Seq tumor CPT0162760009 190712_UNC32-K00270_0192_BH7HL3BBXY_CATTTT_S11_L006_R1_001.unaln.bam 240691968 BAM NA 030a0ace-f36d-4996-84a7-d9bd06f12293 7be2350b96ead9b8bed8b14305b45441 NA Primary Tumor C3N-02592-01 @@ -27774,6 +27792,8 @@ C3N-02592.WXS.N C3N-02592 PDA WXS blood_normal CPT0162820002 CPT0162820002.Whole C3N-02592.WXS.N.hg38 C3N-02592 PDA WXS blood_normal CPT0162820002 e82ffcee-6ec4-4bfd-b8fd-1e92111a7ec3_wxs_gdc_realn.bam 30449199716 BAM NA 0bf1b98c-fa49-4fb7-8b8c-edb0059aa775 38d95e27a81389217f2a9e9cf174cc04 hg38 Blood Derived Normal C3N-02592-31 C3N-02592.WXS.T.hg38.high_cov C3N-02592 PDA WXS tumor CPT0162760006 61953ee5-9be4-4e83-abae-1bc34aa7cbb0_wxs_gdc_realn.bam 70267238794 BAM NA bc04e678-67f7-4638-9a99-885776094996 4e6d54986261a035d06c1ca2af5b8389 hg38 Primary Tumor C3N-02592-01 .high_cov C3N-02592.WXS.T.high_cov C3N-02592 PDA WXS tumor CPT0162760006 CPT0162760006.WholeExome.RP-1303.bam 50433519264 BAM NA a5724f15-059d-4dee-982f-e2425bf50421 4378ccb76ee5934ef0b2e3222ffa7733 hg19 Primary Tumor C3N-02592-01 .high_cov +C3N-02594.RNA-Seq.R1.T C3N-02594 PDA RNA-Seq tumor CPT0187640027 200807_UNC32-K00270_0255_AHHY2WBBXY_TGCGAGAC-CATTGTTG_S3_L005_R1_001.fastq.gz 4800841678 FASTQ NA 3df2a0b9-0800-444f-a464-382f1eaca300 c14f2ac59b9e263ddcea552e8d0773cb NA Primary Tumor C3N-02594-01 +C3N-02594.RNA-Seq.R2.T C3N-02594 PDA RNA-Seq tumor CPT0187640027 200807_UNC32-K00270_0255_AHHY2WBBXY_TGCGAGAC-CATTGTTG_S3_L005_R2_001.fastq.gz 5330813125 FASTQ NA 1a53587a-e0d6-41de-971b-1436817632be 642d718dfc6fb7b9b7edbe0f8265a113 NA Primary Tumor C3N-02594-01 C3N-02595.MethArray.Green.T C3N-02595 UCEC Methylation Array tumor CPT0181810007 203561450025_R06C01_Grn.idat 13676221 IDAT Green b2e81e85-ffe6-4909-83da-5ba3a3002766 4dc55bfac01ec3808f472e341d0ef6f7 NA Primary Tumor C3N-02595-01 C3N-02595.MethArray.Red.T C3N-02595 UCEC Methylation Array tumor CPT0181810007 203561450025_R06C01_Red.idat 13676221 IDAT Red 967a558a-5b88-4239-aacb-c8b97f73bd44 3bffee10e3f7898b54a5b8330ab39886 NA Primary Tumor C3N-02595-01 C3N-02595.miRNA-Seq.T C3N-02595 UCEC miRNA-Seq tumor CPT0181810010 190508_UNC31-K00269_0215_BH7FYKBBXY_CATTTT_S35_L004_R1_001.unaln.bam 220335067 BAM NA 14c1d43b-68c4-4cdd-a1cb-d244d3fcf31f 098968f349d9af630447c4a50400abf6 NA Primary Tumor C3N-02595-01 @@ -28117,6 +28137,8 @@ C3N-02695.WXS.N C3N-02695 HNSCC WXS blood_normal CPT0245000002 CPT0245000002.Who C3N-02695.WXS.N.hg38 C3N-02695 HNSCC WXS blood_normal CPT0245000002 280e96da-7858-45c8-9e2b-1cd59b3fa4a5_wxs_gdc_realn.bam 33321790265 BAM NA 254a5b1d-3581-4940-a0a6-1f9d0feb4cc6 7eef1e4345ef339c1915948d7b22bb4f hg38 Blood Derived Normal C3N-02695-31 C3N-02695.WXS.T.hg38.high_cov C3N-02695 HNSCC WXS tumor CPT0244940010 ed4abe3e-4046-4eb6-9760-036fd53f3af5_wxs_gdc_realn.bam 65755098091 BAM NA 652a39ee-ec5d-4f2d-9344-ba1f77d6ae74 bbd99ea38188af28a1671bc2073cb4e6 hg38 Primary Tumor C3N-02695-01,C3N-02695-02 .high_cov C3N-02695.WXS.T.high_cov C3N-02695 HNSCC WXS tumor CPT0244940010 CPT0244940010.WholeExome.RP-1303.bam 48153539053 BAM NA 2d58c04b-135a-46f5-8e07-78cd8c22e4df 7743fb59f788c3dc1d6293581c25268e hg19 Primary Tumor C3N-02695-01,C3N-02695-02 .high_cov +C3N-02696.RNA-Seq.R1.T C3N-02696 PDA RNA-Seq tumor CPT0187720029 200807_UNC32-K00270_0255_AHHY2WBBXY_CATAGAGT-TGCCACCA_S2_L005_R1_001.fastq.gz 5395654595 FASTQ NA d21f8288-6844-4693-9f81-781a52b7c925 19b83578d3544646e37a0408704a5974 NA Primary Tumor C3N-02696-02 +C3N-02696.RNA-Seq.R2.T C3N-02696 PDA RNA-Seq tumor CPT0187720029 200807_UNC32-K00270_0255_AHHY2WBBXY_CATAGAGT-TGCCACCA_S2_L005_R2_001.fastq.gz 6089753546 FASTQ NA 6657cbe8-77b7-4d68-a44a-be781736d0a8 50ae117fc3ad64a517528d924a5287d3 NA Primary Tumor C3N-02696-02 C3N-02697.MethArray.Green.T C3N-02697 PDA Methylation Array tumor CPT0187780007 203561620153_R02C01_Grn.idat 13676211 IDAT Green 4814ffc2-1abf-44ca-96a1-10fcb0852a1a 6be61a0ee3cfbd0c2805600bfa5d2ff3 NA Primary Tumor C3N-02697-01 C3N-02697.MethArray.Red.T C3N-02697 PDA Methylation Array tumor CPT0187780007 203561620153_R02C01_Red.idat 13676211 IDAT Red 12bfe7b1-a658-47c6-98f3-625f27ad343d cfdea2962c4bce127a72aa5f76aaa566 NA Primary Tumor C3N-02697-01 C3N-02697.miRNA-Seq.T C3N-02697 PDA miRNA-Seq tumor CPT0187780010 190712_UNC32-K00270_0192_BH7HL3BBXY_ATGAGC_S2_L004_R1_001.unaln.bam 155578609 BAM NA e70a32ad-5c49-4800-8705-82ed3489cc87 5192a8a730599bcce381c97ea0098e31 NA Primary Tumor C3N-02697-01 @@ -28360,41 +28382,41 @@ C3N-02726.WXS.N C3N-02726 CCRCC WXS blood_normal CPT0176520002 CPT0176520002.Who C3N-02726.WXS.N.hg38 C3N-02726 CCRCC WXS blood_normal CPT0176520002 686b4ba1-7506-4db8-b6dd-0596d99f6193_wxs_gdc_realn.bam 35276807706 BAM NA a3092dfe-01b9-48a1-9864-ac18fd512e34 e997bed7eb58138eb3a66487693e8ebd hg38 Blood Derived Normal C3N-02726-71 C3N-02726.WXS.T C3N-02726 CCRCC WXS tumor CPT0176400006 CPT0176400006.WholeExome.RP-1303.bam 21871332331 BAM NA 3bfb8866-1440-4192-974d-b68826606f07 b10b41ffc196ca8a5470d8b18345bb97 hg19 Primary Tumor C3N-02726-01 C3N-02726.WXS.T.hg38 C3N-02726 CCRCC WXS tumor CPT0176400006 fbb09331-d988-4569-b31a-20a539b963c3_wxs_gdc_realn.bam 30211959019 BAM NA fc2f8339-8e74-45ba-b592-8cdcc7da458c 0c288be132a9e9ac02b62bbfdbc23678 hg38 Primary Tumor C3N-02726-01 -C3N-02727.MethArray.Green.T C3N-02727 HNSCC Methylation Array tumor CPT0177710006 203273630261_R05C01_Grn.idat 13676231 IDAT Green 892868b5-1d49-440a-b094-587b2c8ef452 65889d0067bd6c8ebeba265b3ce47895 NA Primary Tumor C3N-02727-02 -C3N-02727.MethArray.Red.T C3N-02727 HNSCC Methylation Array tumor CPT0177710006 203273630261_R05C01_Red.idat 13676231 IDAT Red 8ef49f20-2aec-410a-a36a-dbf8d99788f8 db7e22fc0548e9846c933f8e3705fcab NA Primary Tumor C3N-02727-02 +C3N-02727.MethArray.Green.T.RDNA_o2QKOJL C3N-02727 HNSCC Methylation Array tumor CPT0177710006 203273630261_R05C01_Grn.idat 13676231 IDAT Green 892868b5-1d49-440a-b094-587b2c8ef452 65889d0067bd6c8ebeba265b3ce47895 NA Primary Tumor C3N-02727-02 replacement_DNA RDNA_o2QKOJL Duplicate item: Replacement DNA Distribution - original aliquot failed +C3N-02727.MethArray.Red.T.RDNA_o2QKOJL C3N-02727 HNSCC Methylation Array tumor CPT0177710006 203273630261_R05C01_Red.idat 13676231 IDAT Red 8ef49f20-2aec-410a-a36a-dbf8d99788f8 db7e22fc0548e9846c933f8e3705fcab NA Primary Tumor C3N-02727-02 replacement_DNA RDNA_o2QKOJL Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-02727.miRNA-Seq.A C3N-02727 HNSCC miRNA-Seq tissue_normal CPT0177730009 190228_UNC32-K00270_0151_AHYLY3BBXX_TCCCGA_S46_L002_R1_001.unaln.bam 188999597 BAM NA c4766cea-f434-4dbf-aefb-910ed6bce9a9 1cdd50975f1fe36c92ff723da4102569 NA Solid Tissue Normal C3N-02727-06 C3N-02727.miRNA-Seq.A.hg38 C3N-02727 HNSCC miRNA-Seq tissue_normal CPT0177730009 73c76f59-a12d-428e-bce5-535042996eff_mirnaseq_gdc_realn.bam 219795348 BAM NA eefce99a-ccf4-4ce7-8a27-c63396fc027d 87aa8372c2036536c77910b12be58c71 hg38 Solid Tissue Normal C3N-02727-06 -C3N-02727.miRNA-Seq.T C3N-02727 HNSCC miRNA-Seq tumor CPT0177710009 190712_UNC32-K00270_0192_BH7HL3BBXY_GAGTGG_S46_L005_R1_001.unaln.bam 169359931 BAM NA bfc667b5-b647-4bde-aa7b-81b85667d9d7 c0846aec8566d913f884fa5ac91b9388 NA Primary Tumor C3N-02727-02 C3N-02727.miRNA-Seq.T.deprecated C3N-02727 HNSCC miRNA-Seq tumor CPT0177700009 190228_UNC32-K00270_0151_AHYLY3BBXX_TAGCTT_S10_L001_R1_001.unaln.bam 268042821 BAM NA 35baa34a-87b3-4441-8abb-ed9b57518b42 d3fe1d0f05fce9812236e023af7d87bf NA Primary Tumor C3N-02727-01 .deprecated -C3N-02727.miRNA-Seq.T.hg38 C3N-02727 HNSCC miRNA-Seq tumor CPT0177710009 10f0a2e5-7710-4060-a206-04462e45d8d8_mirnaseq_gdc_realn.bam 191095951 BAM NA a6ab3cf3-fac1-4542-8c18-b83f04ae626e b4cc688698a08aa430be421484537a6d hg38 Primary Tumor C3N-02727-02 C3N-02727.miRNA-Seq.T.hg38.deprecated C3N-02727 HNSCC miRNA-Seq tumor CPT0177700009 d5884a2f-c56f-4ed2-b771-e937a53ba284_mirnaseq_gdc_realn.bam 290573212 BAM NA 15e18433-71b9-49b9-9053-878145aa5dd7 c7229c78db6d7076facf727de1c508d5 hg38 Primary Tumor C3N-02727-01 .deprecated +C3N-02727.miRNA-Seq.T.RRNA_rkR5Y7L C3N-02727 HNSCC miRNA-Seq tumor CPT0177710009 190712_UNC32-K00270_0192_BH7HL3BBXY_GAGTGG_S46_L005_R1_001.unaln.bam 169359931 BAM NA bfc667b5-b647-4bde-aa7b-81b85667d9d7 c0846aec8566d913f884fa5ac91b9388 NA Primary Tumor C3N-02727-02 replacement_RNA RRNA_rkR5Y7L Duplicate item: Replacement RNA Distribution - original aliquot failed +C3N-02727.miRNA-Seq.T.RRNA_rkR5Y7L.hg38 C3N-02727 HNSCC miRNA-Seq tumor CPT0177710009 10f0a2e5-7710-4060-a206-04462e45d8d8_mirnaseq_gdc_realn.bam 191095951 BAM NA a6ab3cf3-fac1-4542-8c18-b83f04ae626e b4cc688698a08aa430be421484537a6d hg38 Primary Tumor C3N-02727-02 replacement_RNA RRNA_rkR5Y7L Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-02727.RNA-Seq.chimeric.A.hg38 C3N-02727 HNSCC RNA-Seq tissue_normal CPT0177730009 577f206c-1b58-468a-9107-4a53fc706196.rna_seq.chimeric.gdc_realn.bam 78237610 BAM chimeric d3791502-299d-451b-887d-260373766fe0 2aff4eb9eb43a1da0c5f75169d3a1259 hg38 Solid Tissue Normal C3N-02727-06 -C3N-02727.RNA-Seq.chimeric.T.hg38 C3N-02727 HNSCC RNA-Seq tumor CPT0177710009 1d54241e-451a-4467-8230-a1cf89751b93.rna_seq.chimeric.gdc_realn.bam 33863993 BAM chimeric ef57178d-57ee-4ecb-9239-d74998b9d6f7 9f7ae86c2734abf4460d957a1fb315f6 hg38 Primary Tumor C3N-02727-02 C3N-02727.RNA-Seq.chimeric.T.hg38.deprecated C3N-02727 HNSCC RNA-Seq tumor CPT0177700009 4d0ad197-a619-4fec-9e05-9a0934115c4b.rna_seq.chimeric.gdc_realn.bam 256765935 BAM chimeric 68d01f56-8aae-4011-98d6-298fbdd587f7 71b79dad3e5a7d289c1e4db76f510199 hg38 Primary Tumor C3N-02727-01 .deprecated +C3N-02727.RNA-Seq.chimeric.T.RRNA_rkR5Y7L.hg38 C3N-02727 HNSCC RNA-Seq tumor CPT0177710009 1d54241e-451a-4467-8230-a1cf89751b93.rna_seq.chimeric.gdc_realn.bam 33863993 BAM chimeric ef57178d-57ee-4ecb-9239-d74998b9d6f7 9f7ae86c2734abf4460d957a1fb315f6 hg38 Primary Tumor C3N-02727-02 replacement_RNA RRNA_rkR5Y7L Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-02727.RNA-Seq.genomic.A.hg38 C3N-02727 HNSCC RNA-Seq tissue_normal CPT0177730009 577f206c-1b58-468a-9107-4a53fc706196.rna_seq.genomic.gdc_realn.bam 6296847032 BAM genomic af28ddc2-f580-46b3-a80c-24bfa9a55c06 72b392218dfbc92a046547674325f68f hg38 Solid Tissue Normal C3N-02727-06 -C3N-02727.RNA-Seq.genomic.T.hg38 C3N-02727 HNSCC RNA-Seq tumor CPT0177710009 1d54241e-451a-4467-8230-a1cf89751b93.rna_seq.genomic.gdc_realn.bam 8717243213 BAM genomic 016341f1-bc42-47ac-8fb0-d52d1b8a9970 d1d29afd56ad47907842d76dcf5c48f6 hg38 Primary Tumor C3N-02727-02 C3N-02727.RNA-Seq.genomic.T.hg38.deprecated C3N-02727 HNSCC RNA-Seq tumor CPT0177700009 4d0ad197-a619-4fec-9e05-9a0934115c4b.rna_seq.genomic.gdc_realn.bam 8435475390 BAM genomic 9c3b66f2-0f91-450a-bb65-6f7d9794ef27 e0edef442c17ee3ec55b138212e0f43e hg38 Primary Tumor C3N-02727-01 .deprecated +C3N-02727.RNA-Seq.genomic.T.RRNA_rkR5Y7L.hg38 C3N-02727 HNSCC RNA-Seq tumor CPT0177710009 1d54241e-451a-4467-8230-a1cf89751b93.rna_seq.genomic.gdc_realn.bam 8717243213 BAM genomic 016341f1-bc42-47ac-8fb0-d52d1b8a9970 d1d29afd56ad47907842d76dcf5c48f6 hg38 Primary Tumor C3N-02727-02 replacement_RNA RRNA_rkR5Y7L Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-02727.RNA-Seq.R1.A C3N-02727 HNSCC RNA-Seq tissue_normal CPT0177730009 190219_UNC31-K00269_0194_AH3V53BBXY_GAGTGG_S11_L008_R1_001.fastq.gz 2780571927 FASTQ NA 683166fd-ecea-41f8-9eb3-fcb9c6b840c9 b006a4860a900417decb319bdbaccee5 NA Solid Tissue Normal C3N-02727-06 -C3N-02727.RNA-Seq.R1.T C3N-02727 HNSCC RNA-Seq tumor CPT0177710009 190621_UNC32-K00270_0185_BH7G72BBXY_ACTCGTGT-ATTGGAAC_S16_L004_R1_001.fastq.gz 4186447836 FASTQ NA 06bcb46c-5165-49cf-aaa8-e1cd7bc0e156 a82551d276c0b7d38ffcef43434fae0d NA Primary Tumor C3N-02727-02 C3N-02727.RNA-Seq.R1.T.deprecated C3N-02727 HNSCC RNA-Seq tumor CPT0177700009 190215_UNC32-K00270_0147_AH3VGHBBXY_TAGCTT_S11_L003_R1_001.fastq.gz 3866141877 FASTQ NA 446b80eb-9e39-45f3-ac5c-cb7c01842aec 7f8934d6d2c834add624b59444ffecb6 NA Primary Tumor C3N-02727-01 .deprecated +C3N-02727.RNA-Seq.R1.T.RRNA_rkR5Y7L C3N-02727 HNSCC RNA-Seq tumor CPT0177710009 190621_UNC32-K00270_0185_BH7G72BBXY_ACTCGTGT-ATTGGAAC_S16_L004_R1_001.fastq.gz 4186447836 FASTQ NA 06bcb46c-5165-49cf-aaa8-e1cd7bc0e156 a82551d276c0b7d38ffcef43434fae0d NA Primary Tumor C3N-02727-02 replacement_RNA RRNA_rkR5Y7L Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-02727.RNA-Seq.R2.A C3N-02727 HNSCC RNA-Seq tissue_normal CPT0177730009 190219_UNC31-K00269_0194_AH3V53BBXY_GAGTGG_S11_L008_R2_001.fastq.gz 2999648177 FASTQ NA 19c13f02-2bf0-4c05-b145-17c1b5fa030f dfcea2dcdacfdc6b3a9f174b2ceeba7b NA Solid Tissue Normal C3N-02727-06 -C3N-02727.RNA-Seq.R2.T C3N-02727 HNSCC RNA-Seq tumor CPT0177710009 190621_UNC32-K00270_0185_BH7G72BBXY_ACTCGTGT-ATTGGAAC_S16_L004_R2_001.fastq.gz 4554988535 FASTQ NA 54804c92-509a-48fc-9a92-ab8b5376ce66 02b55cf1cc56654a482ef4612e37e9a1 NA Primary Tumor C3N-02727-02 C3N-02727.RNA-Seq.R2.T.deprecated C3N-02727 HNSCC RNA-Seq tumor CPT0177700009 190215_UNC32-K00270_0147_AH3VGHBBXY_TAGCTT_S11_L003_R2_001.fastq.gz 4192346139 FASTQ NA 296ca088-9806-4f79-9cae-62bace29aa36 27ff77ec5e06961ca66112ee4dc42676 NA Primary Tumor C3N-02727-01 .deprecated +C3N-02727.RNA-Seq.R2.T.RRNA_rkR5Y7L C3N-02727 HNSCC RNA-Seq tumor CPT0177710009 190621_UNC32-K00270_0185_BH7G72BBXY_ACTCGTGT-ATTGGAAC_S16_L004_R2_001.fastq.gz 4554988535 FASTQ NA 54804c92-509a-48fc-9a92-ab8b5376ce66 02b55cf1cc56654a482ef4612e37e9a1 NA Primary Tumor C3N-02727-02 replacement_RNA RRNA_rkR5Y7L Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-02727.RNA-Seq.transcriptome.A.hg38 C3N-02727 HNSCC RNA-Seq tissue_normal CPT0177730009 577f206c-1b58-468a-9107-4a53fc706196.rna_seq.transcriptome.gdc_realn.bam 7675095555 BAM transcriptome 2d98d285-34c8-49ef-85f4-3ded64926227 356b52cf629330bc22c6c44d47cc800e hg38 Solid Tissue Normal C3N-02727-06 -C3N-02727.RNA-Seq.transcriptome.T.hg38 C3N-02727 HNSCC RNA-Seq tumor CPT0177710009 1d54241e-451a-4467-8230-a1cf89751b93.rna_seq.transcriptome.gdc_realn.bam 9762173268 BAM transcriptome bce8fad5-6689-4e1f-9bb3-1b9e6cfb52b6 d09bcf3bdbdb250ca140d3d46a1d479c hg38 Primary Tumor C3N-02727-02 C3N-02727.RNA-Seq.transcriptome.T.hg38.deprecated C3N-02727 HNSCC RNA-Seq tumor CPT0177700009 4d0ad197-a619-4fec-9e05-9a0934115c4b.rna_seq.transcriptome.gdc_realn.bam 8851504992 BAM transcriptome 47ce918f-1cf9-40b8-823e-86a62f856abe 816c79b88bfc0e435d1127a645f18786 hg38 Primary Tumor C3N-02727-01 .deprecated +C3N-02727.RNA-Seq.transcriptome.T.RRNA_rkR5Y7L.hg38 C3N-02727 HNSCC RNA-Seq tumor CPT0177710009 1d54241e-451a-4467-8230-a1cf89751b93.rna_seq.transcriptome.gdc_realn.bam 9762173268 BAM transcriptome bce8fad5-6689-4e1f-9bb3-1b9e6cfb52b6 d09bcf3bdbdb250ca140d3d46a1d479c hg38 Primary Tumor C3N-02727-02 replacement_RNA RRNA_rkR5Y7L Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-02727.WGS.N C3N-02727 HNSCC WGS blood_normal CPT0177820002 CPT0177820002.WholeGenome.RP-1303.bam 65291598979 BAM NA 53d35c55-274d-4b75-97ee-90d349df4a51 b6118756ad07057051ccf999a3d11559 hg19 Blood Derived Normal C3N-02727-71 C3N-02727.WGS.N.hg38 C3N-02727 HNSCC WGS blood_normal CPT0177820002 e4e0a7a8-7b08-4410-85c6-b9bf8e6741ad_wgs_gdc_realn.bam 96179092735 BAM NA 534a92c0-65c8-4e42-a3bb-b673c4c0c952 a0b1049cb5497da327de4b35b0f30c7d hg38 Blood Derived Normal C3N-02727-71 -C3N-02727.WGS.T C3N-02727 HNSCC WGS tumor CPT0177710006 CPT0177710006.WholeGenome.RP-1303.bam 65160624693 BAM NA 99a35606-a3ff-481f-835c-15c535b5a25e 397ab5f82f009505232906d591b03216 hg19 Primary Tumor C3N-02727-02 -C3N-02727.WGS.T.hg38 C3N-02727 HNSCC WGS tumor CPT0177710006 7d212c59-d44b-4209-baa1-4cc11d663cde_wgs_gdc_realn.bam 94309626912 BAM NA 6f023d6b-28c0-4dcf-aab9-67cc3da1bc46 42615a1df46446e70dd99d877cd17ccf hg38 Primary Tumor C3N-02727-02 +C3N-02727.WGS.T.RDNA_o2QKOJL C3N-02727 HNSCC WGS tumor CPT0177710006 CPT0177710006.WholeGenome.RP-1303.bam 65160624693 BAM NA 99a35606-a3ff-481f-835c-15c535b5a25e 397ab5f82f009505232906d591b03216 hg19 Primary Tumor C3N-02727-02 replacement_DNA RDNA_o2QKOJL Duplicate item: Replacement DNA Distribution - original aliquot failed +C3N-02727.WGS.T.RDNA_o2QKOJL.hg38 C3N-02727 HNSCC WGS tumor CPT0177710006 7d212c59-d44b-4209-baa1-4cc11d663cde_wgs_gdc_realn.bam 94309626912 BAM NA 6f023d6b-28c0-4dcf-aab9-67cc3da1bc46 42615a1df46446e70dd99d877cd17ccf hg38 Primary Tumor C3N-02727-02 replacement_DNA RDNA_o2QKOJL Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-02727.WXS.A C3N-02727 HNSCC WXS tissue_normal CPT0177730006 CPT0177730006.WholeExome.RP-1303.bam 45036632991 BAM NA cb63efb7-a3b1-457a-8e58-3875466072b6 2e9edd006076f15a546a6586d50270fe hg19 Solid Tissue Normal C3N-02727-06 C3N-02727.WXS.A.hg38 C3N-02727 HNSCC WXS tissue_normal CPT0177730006 77600803-d00f-41b1-a9d6-94639aa9ae4c_wxs_gdc_realn.bam 61968923683 BAM NA 033dd809-04d0-40c5-a173-991dddc8582c 43141cae0891141dd496018862fde030 hg38 Solid Tissue Normal C3N-02727-06 C3N-02727.WXS.N C3N-02727 HNSCC WXS blood_normal CPT0177820002 CPT0177820002.WholeExome.RP-1303.bam 28217401624 BAM NA a99684ae-ee3b-4caf-bd5c-10f3208198cf 04b3bb4e8d4b2380c7181d3f71686f0f hg19 Blood Derived Normal C3N-02727-71 C3N-02727.WXS.N.hg38 C3N-02727 HNSCC WXS blood_normal CPT0177820002 e4e0a7a8-7b08-4410-85c6-b9bf8e6741ad_wxs_gdc_realn.bam 39255452096 BAM NA 35952812-07f6-4892-853d-756808de65d2 a2458a2d4669c16c106afe3fdbaed54c hg38 Blood Derived Normal C3N-02727-71 -C3N-02727.WXS.T C3N-02727 HNSCC WXS tumor CPT0177710006 CPT0177710006.WholeExome.RP-1303.bam 24833035485 BAM NA 3a0f4c9e-a962-48f0-81dd-6837bb2ef128 6c57e5c56ba8c85cee26e38cec66f234 hg19 Primary Tumor C3N-02727-02 C3N-02727.WXS.T.deprecated C3N-02727 HNSCC WXS tumor CPT0177700006 CPT0177700006.WholeExome.RP-1303.bam 21422171772 BAM NA cb13f827-c4af-49fb-8311-222dc397cf94 44492eace13a6a66c8eb74da834d1622 hg19 Primary Tumor C3N-02727-01 .deprecated -C3N-02727.WXS.T.hg38 C3N-02727 HNSCC WXS tumor CPT0177710006 7d212c59-d44b-4209-baa1-4cc11d663cde_wxs_gdc_realn.bam 34203568393 BAM NA 7f254a93-1d05-4de7-81e2-85a5c4218e85 cf7e9ed997a5b8ce99e1e63355833fef hg38 Primary Tumor C3N-02727-02 C3N-02727.WXS.T.hg38.deprecated C3N-02727 HNSCC WXS tumor CPT0177700006 73a9d41d-c6fb-492a-894f-597027e12089_wxs_gdc_realn.bam 29225087083 BAM NA 7e341e90-27ab-42b4-8870-307a9e9d67df 44147e65752ccec8303a5d6ea5891e9d hg38 Primary Tumor C3N-02727-01 .deprecated +C3N-02727.WXS.T.RDNA_o2QKOJL C3N-02727 HNSCC WXS tumor CPT0177710006 CPT0177710006.WholeExome.RP-1303.bam 24833035485 BAM NA 3a0f4c9e-a962-48f0-81dd-6837bb2ef128 6c57e5c56ba8c85cee26e38cec66f234 hg19 Primary Tumor C3N-02727-02 replacement_DNA RDNA_o2QKOJL Duplicate item: Replacement DNA Distribution - original aliquot failed +C3N-02727.WXS.T.RDNA_o2QKOJL.hg38 C3N-02727 HNSCC WXS tumor CPT0177710006 7d212c59-d44b-4209-baa1-4cc11d663cde_wxs_gdc_realn.bam 34203568393 BAM NA 7f254a93-1d05-4de7-81e2-85a5c4218e85 cf7e9ed997a5b8ce99e1e63355833fef hg38 Primary Tumor C3N-02727-02 replacement_DNA RDNA_o2QKOJL Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-02728.MethArray.Green.A C3N-02728 LUAD Methylation Array tissue_normal CPT0178990006 203220070157_R03C01_Grn.idat 13676216 IDAT Green a2c200c1-a4ff-41f5-b802-84fea4e90afb 9a87a694cdc6c39bdbf0fc14a87d1b33 NA Solid Tissue Normal C3N-02728-06 C3N-02728.MethArray.Green.T C3N-02728 LUAD Methylation Array tumor CPT0178980006 203219670150_R08C01_Grn.idat 13676230 IDAT Green 8a61746c-b693-4028-9b61-7b10b0ac8c66 629de3e8e4812efb96fd47bb230d5a26 NA Primary Tumor C3N-02728-03 C3N-02728.MethArray.Red.A C3N-02728 LUAD Methylation Array tissue_normal CPT0178990006 203220070157_R03C01_Red.idat 13676216 IDAT Red d553cde2-dc70-47d2-ae11-bb387e65b646 71c773c638a85e3944cf548274081f2c NA Solid Tissue Normal C3N-02728-06 @@ -28470,6 +28492,8 @@ C3N-02730.WXS.N C3N-02730 HNSCC WXS blood_normal CPT0207930002 CPT0207930002.Who C3N-02730.WXS.N.hg38 C3N-02730 HNSCC WXS blood_normal CPT0207930002 94f56b2c-3b64-4b92-b36c-8e095ce5d28d_wxs_gdc_realn.bam 57911338150 BAM NA 100e34c1-170c-4dbd-ad63-de812aa9378a 0da7c8abf72b6c66541fe31f241fc67c hg38 Blood Derived Normal C3N-02730-71 C3N-02730.WXS.T C3N-02730 HNSCC WXS tumor CPT0207870007 CPT0207870007.WholeExome.RP-1303.bam 23614581238 BAM NA 5767071e-3ec2-4107-ac66-a48505dcaeff 31fa7ce20515ffc1471e59cfcaa0057c hg19 Primary Tumor C3N-02730-01,C3N-02730-02 C3N-02730.WXS.T.hg38 C3N-02730 HNSCC WXS tumor CPT0207870007 ac6a9fd3-ca87-4867-94ab-03056f12936a_wxs_gdc_realn.bam 32180334608 BAM NA fb95b973-712c-4c79-ac6e-670018f48c16 e07b8af40a787dcb3cc099ff16358677 hg38 Primary Tumor C3N-02730-01,C3N-02730-02 +C3N-02754.RNA-Seq.R1.T C3N-02754 PDA RNA-Seq tumor CPT0183850033 200807_UNC32-K00270_0255_AHHY2WBBXY_AGTACTCC-AACCTGTT_S4_L006_R1_001.fastq.gz 3957470951 FASTQ NA 03aaf392-5fdd-4d5e-ad97-60c83afddd7f 905a737a0d4d2fb79fdc648c0bc26d46 NA Primary Tumor C3N-02754-01 +C3N-02754.RNA-Seq.R2.T C3N-02754 PDA RNA-Seq tumor CPT0183850033 200807_UNC32-K00270_0255_AHHY2WBBXY_AGTACTCC-AACCTGTT_S4_L006_R2_001.fastq.gz 4464592514 FASTQ NA 821f4055-a8c6-4d89-8d28-0ef2b9a4f43d 74dfd9a890230ab233863336a92962c5 NA Primary Tumor C3N-02754-01 C3N-02757.MethArray.Green.A C3N-02757 LUAD Methylation Array tissue_normal CPT0183960006 203028200100_R06C01_Grn.idat 13676221 IDAT Green 39a494fe-695f-4cd3-a5cd-4df3cc50625b 3dada41ddcdf117c4f4ea0171e8b0120 NA Solid Tissue Normal C3N-02757-03 C3N-02757.MethArray.Green.T C3N-02757 LUAD Methylation Array tumor CPT0183940007 203219650177_R08C01_Grn.idat 13676221 IDAT Green 09af74c8-f13f-440e-89be-7f3cbabc3bfd ee81d572b394fc9276e2fe315b0b5931 NA Primary Tumor C3N-02757-01,C3N-02757-02 C3N-02757.MethArray.Red.A C3N-02757 LUAD Methylation Array tissue_normal CPT0183960006 203028200100_R06C01_Red.idat 13676221 IDAT Red ab7a09e7-d597-4400-ba2b-362b3303afcb b905e0b88466ee7b945612c3aeeabac0 NA Solid Tissue Normal C3N-02757-03 @@ -28588,6 +28612,8 @@ C3N-02764.WXS.N C3N-02764 LUAD WXS blood_normal CPT0184400002 CPT0184400002.Whol C3N-02764.WXS.N.hg38 C3N-02764 LUAD WXS blood_normal CPT0184400002 668cc3ea-3515-4e22-8c18-23fd22dfbc31_wxs_gdc_realn.bam 30085370723 BAM NA 1d9880d8-f0e9-4c28-ad1e-4b0c121db2bd 0028aaac7d03e158a55f23d246bbe187 hg38 Blood Derived Normal C3N-02764-71 C3N-02764.WXS.T C3N-02764 LUAD WXS tumor CPT0184350010 CPT0184350010.WholeExome.RP-1303.bam 21853775270 BAM NA 52e6c6d0-af75-452e-9698-8e594d4ac393 d7b3a8f6efe273f410a72995244e811e hg19 Primary Tumor C3N-02764-02,C3N-02764-03 C3N-02764.WXS.T.hg38 C3N-02764 LUAD WXS tumor CPT0184350010 eaea7605-ec9f-4634-979f-8b8346388609_wxs_gdc_realn.bam 29818447906 BAM NA f091ceb9-d929-4311-a99e-2d44ff3b90fd ef0d91d72ae453dfae75c441bbe45ce2 hg38 Primary Tumor C3N-02764-02,C3N-02764-03 +C3N-02765.RNA-Seq.R1.T C3N-02765 PDA RNA-Seq tumor CPT0184450049 200807_UNC32-K00270_0255_AHHY2WBBXY_GTCTACAC-GCCAAGGT_S11_L007_R1_001.fastq.gz 3476702923 FASTQ NA 6ed9b2ec-4ae8-40e3-a76c-a358dc9199c2 2596aa9862d456523691404159005811 NA Primary Tumor C3N-02765-02 +C3N-02765.RNA-Seq.R2.T C3N-02765 PDA RNA-Seq tumor CPT0184450049 200807_UNC32-K00270_0255_AHHY2WBBXY_GTCTACAC-GCCAAGGT_S11_L007_R2_001.fastq.gz 3883224355 FASTQ NA ec78d64b-29ef-457b-a8ef-e1159a06d851 208816663ed0a0d09f47972a77e21144 NA Primary Tumor C3N-02765-02 C3N-02768.MethArray.Green.A C3N-02768 PDA Methylation Array tissue_normal CPT0207990007 203561450106_R07C01_Grn.idat 13676216 IDAT Green 49258024-95b7-4330-a311-befb587a75c7 a6bc4e8856db96200598f29b8c3a695a NA Solid Tissue Normal C3N-02768-03 C3N-02768.MethArray.Green.T C3N-02768 PDA Methylation Array tumor CPT0207980008 203561450027_R01C01_Grn.idat 13676221 IDAT Green c7fb07b5-b1f8-4217-ad32-97e5e3787788 ec02ce59cdb9f077de9e219fd90f445b NA Primary Tumor C3N-02768-01,C3N-02768-02 C3N-02768.MethArray.Red.A C3N-02768 PDA Methylation Array tissue_normal CPT0207990007 203561450106_R07C01_Red.idat 13676216 IDAT Red 795efa34-5e8b-4459-8eca-bf7a61714855 a0ce30ecb5fc6d1d31914f0228d90fd2 NA Solid Tissue Normal C3N-02768-03 @@ -28742,36 +28768,36 @@ C3N-02786.WXS.N C3N-02786 GBM WXS blood_normal CPT0206280002 CPT0206280002.Whole C3N-02786.WXS.N.hg38 C3N-02786 GBM WXS blood_normal CPT0206280002 66d7fa25-dd36-444f-be45-50698701694a_wxs_gdc_realn.bam 31366491796 BAM NA 6dc8a3c2-fcf3-454e-a7ff-c7d68221afe5 28af64d28af8ddc78cdb71eae1ea2363 hg38 Blood Derived Normal C3N-02786-71 C3N-02786.WXS.T C3N-02786 GBM WXS tumor CPT0206230006 CPT0206230006.WholeExome.RP-1303.bam 27544379285 BAM NA 4aaf1a8b-99be-434e-ac59-5a5a2f2a864a b2c27ab1e78a2d0537279ce1cbb3056d hg19 Primary Tumor C3N-02786-02 C3N-02786.WXS.T.hg38 C3N-02786 GBM WXS tumor CPT0206230006 b169e6e6-a391-4fe4-853c-5b74726d30b5_wxs_gdc_realn.bam 38576985968 BAM NA a22d1da6-bddf-4798-b4bd-07a0832c9da1 fce347207dbc2ab3a6b21e2e39e7f535 hg38 Primary Tumor C3N-02786-02 -C3N-02788.MethArray.Green.T C3N-02788 GBM Methylation Array tumor CPT0206330006 203561450100_R04C01_Grn.idat 13676221 IDAT Green a11904d0-8eaf-4ef1-9483-c0cf3d6efa82 b6b9e3c6da94f87e916c4e1d7c7969b0 NA Primary Tumor C3N-02788-01 C3N-02788.MethArray.Green.T.deprecated C3N-02788 GBM Methylation Array tumor CPT0206350009 203219650174_R02C01_Grn.idat 13676216 IDAT Green 5669638e-6bc7-4b39-b8a0-320bd26e9035 03be6c29a0ff8e288936e7a8c106021b NA Primary Tumor C3N-02788-03 .deprecated -C3N-02788.MethArray.Red.T C3N-02788 GBM Methylation Array tumor CPT0206330006 203561450100_R04C01_Red.idat 13676221 IDAT Red 887629ca-f957-4dbf-88e1-c76a23b853a2 83ca5d788cac6d79cae3abbf51e76db5 NA Primary Tumor C3N-02788-01 +C3N-02788.MethArray.Green.T.RDNA_o26YyKX C3N-02788 GBM Methylation Array tumor CPT0206330006 203561450100_R04C01_Grn.idat 13676221 IDAT Green a11904d0-8eaf-4ef1-9483-c0cf3d6efa82 b6b9e3c6da94f87e916c4e1d7c7969b0 NA Primary Tumor C3N-02788-01 replacement_DNA RDNA_o26YyKX Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-02788.MethArray.Red.T.deprecated C3N-02788 GBM Methylation Array tumor CPT0206350009 203219650174_R02C01_Red.idat 13676216 IDAT Red 0d3fb5d5-ceab-4dd9-be3a-c7bb00e45db0 691f32a60513b476c140113a121b7e62 NA Primary Tumor C3N-02788-03 .deprecated -C3N-02788.miRNA-Seq.T C3N-02788 GBM miRNA-Seq tumor CPT0206330009 190712_UNC32-K00270_0192_BH7HL3BBXY_TATAAT_S20_L006_R1_001.unaln.bam 249498216 BAM NA 25a3e5fd-e370-47a6-966d-0c0383465e5e 57e30b4c2d050098ccc339253078f18b NA Primary Tumor C3N-02788-01 +C3N-02788.MethArray.Red.T.RDNA_o26YyKX C3N-02788 GBM Methylation Array tumor CPT0206330006 203561450100_R04C01_Red.idat 13676221 IDAT Red 887629ca-f957-4dbf-88e1-c76a23b853a2 83ca5d788cac6d79cae3abbf51e76db5 NA Primary Tumor C3N-02788-01 replacement_DNA RDNA_o26YyKX Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-02788.miRNA-Seq.T.deprecated C3N-02788 GBM miRNA-Seq tumor CPT0206350006 181219_UNC31-K00269_0173_BHYGJJBBXX_ATGAGC_S25_L004_R1_001.unaln.bam 212225468 BAM NA 32ffb60a-e650-47d6-8cd1-5b654f13fff0 17c79e85590449a45ffb9333e3a7bd68 NA Primary Tumor C3N-02788-03 .deprecated -C3N-02788.miRNA-Seq.T.hg38 C3N-02788 GBM miRNA-Seq tumor CPT0206330009 e9a7f315-2214-4b4e-a9bd-19be335a1d95_mirnaseq_gdc_realn.bam 277630523 BAM NA d861cbe4-15f7-4707-82a0-64f2dc16e953 3b4fe7d1145f776d61de645e627e8db5 hg38 Primary Tumor C3N-02788-01 C3N-02788.miRNA-Seq.T.hg38.deprecated C3N-02788 GBM miRNA-Seq tumor CPT0206350006 54ef412e-a7e4-4666-b0f3-0107a6a9acc0_mirnaseq_gdc_realn.bam 237797263 BAM NA dac01cac-6b67-4bf0-8ef7-8f5f96fb5b79 74e27b7a1d12a09865a029d58dbd9c9a hg38 Primary Tumor C3N-02788-03 .deprecated -C3N-02788.RNA-Seq.chimeric.T.hg38 C3N-02788 GBM RNA-Seq tumor CPT0206330009 7dc13510-8ae4-413e-9cb4-dcfde72db414.rna_seq.chimeric.gdc_realn.bam 59833911 BAM chimeric 5a7f6c48-20e4-440e-a6d0-588c4df1c6ff 47a441384620ce8f07dd5d1a3d6d2304 hg38 Primary Tumor C3N-02788-01 +C3N-02788.miRNA-Seq.T.RRNA_rkM095p C3N-02788 GBM miRNA-Seq tumor CPT0206330009 190712_UNC32-K00270_0192_BH7HL3BBXY_TATAAT_S20_L006_R1_001.unaln.bam 249498216 BAM NA 25a3e5fd-e370-47a6-966d-0c0383465e5e 57e30b4c2d050098ccc339253078f18b NA Primary Tumor C3N-02788-01 replacement_RNA RRNA_rkM095p Duplicate item: Replacement RNA Distribution - original aliquot failed +C3N-02788.miRNA-Seq.T.RRNA_rkM095p.hg38 C3N-02788 GBM miRNA-Seq tumor CPT0206330009 e9a7f315-2214-4b4e-a9bd-19be335a1d95_mirnaseq_gdc_realn.bam 277630523 BAM NA d861cbe4-15f7-4707-82a0-64f2dc16e953 3b4fe7d1145f776d61de645e627e8db5 hg38 Primary Tumor C3N-02788-01 replacement_RNA RRNA_rkM095p Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-02788.RNA-Seq.chimeric.T.hg38.deprecated C3N-02788 GBM RNA-Seq tumor CPT0206350006 5ee2f0ff-a4ef-473e-b4f1-363f157d5def.rna_seq.chimeric.gdc_realn.bam 198910017 BAM chimeric ab06f778-5a29-4f14-b75b-298e36d4ebe8 d82bcf72556377cb09553a3fedcb45ff hg38 Primary Tumor C3N-02788-03 .deprecated -C3N-02788.RNA-Seq.genomic.T.hg38 C3N-02788 GBM RNA-Seq tumor CPT0206330009 7dc13510-8ae4-413e-9cb4-dcfde72db414.rna_seq.genomic.gdc_realn.bam 11268027254 BAM genomic 039ecf19-784c-4230-b362-b9b69e38a45a 9de92310462b6653d934f96abc6224c9 hg38 Primary Tumor C3N-02788-01 +C3N-02788.RNA-Seq.chimeric.T.RRNA_rkM095p.hg38 C3N-02788 GBM RNA-Seq tumor CPT0206330009 7dc13510-8ae4-413e-9cb4-dcfde72db414.rna_seq.chimeric.gdc_realn.bam 59833911 BAM chimeric 5a7f6c48-20e4-440e-a6d0-588c4df1c6ff 47a441384620ce8f07dd5d1a3d6d2304 hg38 Primary Tumor C3N-02788-01 replacement_RNA RRNA_rkM095p Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-02788.RNA-Seq.genomic.T.hg38.deprecated C3N-02788 GBM RNA-Seq tumor CPT0206350006 5ee2f0ff-a4ef-473e-b4f1-363f157d5def.rna_seq.genomic.gdc_realn.bam 9975497060 BAM genomic 62179a40-8513-44ab-82bd-574fe33f0471 d41f1ba9aa358ddcf5f3376b6d2a472f hg38 Primary Tumor C3N-02788-03 .deprecated -C3N-02788.RNA-Seq.R1.T C3N-02788 GBM RNA-Seq tumor CPT0206330009 190614_UNC32-K00270_0182_BH7777BBXY_GGAGCGTC-GTCCGTGC_S5_L002_R1_001.fastq.gz 4684053431 FASTQ NA 7bf21101-629d-4259-9f38-bfe43c0d53fc c49453e0b5b74b6319d52cc63db777fb NA Primary Tumor C3N-02788-01 +C3N-02788.RNA-Seq.genomic.T.RRNA_rkM095p.hg38 C3N-02788 GBM RNA-Seq tumor CPT0206330009 7dc13510-8ae4-413e-9cb4-dcfde72db414.rna_seq.genomic.gdc_realn.bam 11268027254 BAM genomic 039ecf19-784c-4230-b362-b9b69e38a45a 9de92310462b6653d934f96abc6224c9 hg38 Primary Tumor C3N-02788-01 replacement_RNA RRNA_rkM095p Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-02788.RNA-Seq.R1.T.deprecated C3N-02788 GBM RNA-Seq tumor CPT0206350006 181002_UNC31-K00269_0156_AHWN3HBBXX_CGATGT_S2_L008_R1_001.fastq.gz 4658025764 FASTQ NA 62b1b0ce-4eb2-46d2-94d8-aee595b6d77b 53957fcb41603b6eeaa1b0ed02eff4e6 NA Primary Tumor C3N-02788-03 .deprecated -C3N-02788.RNA-Seq.R2.T C3N-02788 GBM RNA-Seq tumor CPT0206330009 190614_UNC32-K00270_0182_BH7777BBXY_GGAGCGTC-GTCCGTGC_S5_L002_R2_001.fastq.gz 5280082406 FASTQ NA a9dca933-ce7f-4c10-baf2-71e0ac9d55b4 aebec0339799c517d34032a504b8a6d1 NA Primary Tumor C3N-02788-01 +C3N-02788.RNA-Seq.R1.T.RRNA_rkM095p C3N-02788 GBM RNA-Seq tumor CPT0206330009 190614_UNC32-K00270_0182_BH7777BBXY_GGAGCGTC-GTCCGTGC_S5_L002_R1_001.fastq.gz 4684053431 FASTQ NA 7bf21101-629d-4259-9f38-bfe43c0d53fc c49453e0b5b74b6319d52cc63db777fb NA Primary Tumor C3N-02788-01 replacement_RNA RRNA_rkM095p Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-02788.RNA-Seq.R2.T.deprecated C3N-02788 GBM RNA-Seq tumor CPT0206350006 181002_UNC31-K00269_0156_AHWN3HBBXX_CGATGT_S2_L008_R2_001.fastq.gz 4762905703 FASTQ NA 146465b8-09cb-4b1c-966b-cb5ac56598eb e813c1293b66bca19b82431de76bc308 NA Primary Tumor C3N-02788-03 .deprecated -C3N-02788.RNA-Seq.transcriptome.T.hg38 C3N-02788 GBM RNA-Seq tumor CPT0206330009 7dc13510-8ae4-413e-9cb4-dcfde72db414.rna_seq.transcriptome.gdc_realn.bam 9374549081 BAM transcriptome 472bc32a-24f4-4758-9979-5b5b24565e3e c3baeafeaba8c6c3da1c0d96e71f278e hg38 Primary Tumor C3N-02788-01 +C3N-02788.RNA-Seq.R2.T.RRNA_rkM095p C3N-02788 GBM RNA-Seq tumor CPT0206330009 190614_UNC32-K00270_0182_BH7777BBXY_GGAGCGTC-GTCCGTGC_S5_L002_R2_001.fastq.gz 5280082406 FASTQ NA a9dca933-ce7f-4c10-baf2-71e0ac9d55b4 aebec0339799c517d34032a504b8a6d1 NA Primary Tumor C3N-02788-01 replacement_RNA RRNA_rkM095p Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-02788.RNA-Seq.transcriptome.T.hg38.deprecated C3N-02788 GBM RNA-Seq tumor CPT0206350006 5ee2f0ff-a4ef-473e-b4f1-363f157d5def.rna_seq.transcriptome.gdc_realn.bam 11075739003 BAM transcriptome cada5703-567e-4834-bb3e-8a818122614e b121ffc8ba2e7f0e91d5deeac2246549 hg38 Primary Tumor C3N-02788-03 .deprecated +C3N-02788.RNA-Seq.transcriptome.T.RRNA_rkM095p.hg38 C3N-02788 GBM RNA-Seq tumor CPT0206330009 7dc13510-8ae4-413e-9cb4-dcfde72db414.rna_seq.transcriptome.gdc_realn.bam 9374549081 BAM transcriptome 472bc32a-24f4-4758-9979-5b5b24565e3e c3baeafeaba8c6c3da1c0d96e71f278e hg38 Primary Tumor C3N-02788-01 replacement_RNA RRNA_rkM095p Duplicate item: Replacement RNA Distribution - original aliquot failed C3N-02788.WGS.N C3N-02788 GBM WGS blood_normal CPT0206390002 CPT0206390002.WholeGenome.RP-1303.bam 60760463962 BAM NA ade8f2ff-6eb1-4b41-aba0-911969d177c6 cb7beb43aac83f4a7acdba0150a96f78 hg19 Blood Derived Normal C3N-02788-71 C3N-02788.WGS.N.hg38 C3N-02788 GBM WGS blood_normal CPT0206390002 784b8eee-0d64-4a0c-bb26-694e63127598_wgs_gdc_realn.bam 88933770661 BAM NA 9cee893d-bbe8-4f6b-a08f-e20512c97679 169cee23bf7ccae1077aa4a468bef708 hg38 Blood Derived Normal C3N-02788-71 -C3N-02788.WGS.T C3N-02788 GBM WGS tumor CPT0206330006 CPT0206330006.WholeGenome.RP-1303.bam 64019815472 BAM NA 1a6c06bd-b790-442e-8c91-4f8057a89275 bca81d47d116b0dd7048c7471f6122e9 hg19 Primary Tumor C3N-02788-01 C3N-02788.WGS.T.deprecated C3N-02788 GBM WGS tumor CPT0206350009 CPT0206350009.WholeGenome.RP-1303.bam 61474194371 BAM NA 53085456-74c5-4b93-b477-992efe9741ca 1f7070aed1031acd780af7d88108d9bc hg19 Primary Tumor C3N-02788-03 .deprecated -C3N-02788.WGS.T.hg38 C3N-02788 GBM WGS tumor CPT0206330006 7abd92d0-2c6c-4fe7-a411-32349d22d560_wgs_gdc_realn.bam 91320411824 BAM NA 2929e7c9-d068-40e3-b84d-071b68f43ca8 305e7bed5e096c6fa6739b99d205ef5a hg38 Primary Tumor C3N-02788-01 C3N-02788.WGS.T.hg38.deprecated C3N-02788 GBM WGS tumor CPT0206350009 aa167109-bd98-4b3b-99d8-019e11e988f5_wgs_gdc_realn.bam 89085921042 BAM NA 1033d5bc-bb5c-4819-b984-d13b2b2a18bc 480e1a27c306ea77d7d7c2d15d53329c hg38 Primary Tumor C3N-02788-03 .deprecated +C3N-02788.WGS.T.RDNA_o26YyKX C3N-02788 GBM WGS tumor CPT0206330006 CPT0206330006.WholeGenome.RP-1303.bam 64019815472 BAM NA 1a6c06bd-b790-442e-8c91-4f8057a89275 bca81d47d116b0dd7048c7471f6122e9 hg19 Primary Tumor C3N-02788-01 replacement_DNA RDNA_o26YyKX Duplicate item: Replacement DNA Distribution - original aliquot failed +C3N-02788.WGS.T.RDNA_o26YyKX.hg38 C3N-02788 GBM WGS tumor CPT0206330006 7abd92d0-2c6c-4fe7-a411-32349d22d560_wgs_gdc_realn.bam 91320411824 BAM NA 2929e7c9-d068-40e3-b84d-071b68f43ca8 305e7bed5e096c6fa6739b99d205ef5a hg38 Primary Tumor C3N-02788-01 replacement_DNA RDNA_o26YyKX Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-02788.WXS.N C3N-02788 GBM WXS blood_normal CPT0206390002 CPT0206390002.WholeExome.RP-1303.bam 31488877550 BAM NA e8ead195-f58b-4e4b-af3f-e9db12f423a2 6b9a922b357f4350f060c62171cb5656 hg19 Blood Derived Normal C3N-02788-71 C3N-02788.WXS.N.hg38 C3N-02788 GBM WXS blood_normal CPT0206390002 784b8eee-0d64-4a0c-bb26-694e63127598_wxs_gdc_realn.bam 43614585993 BAM NA c488d878-1022-4929-890c-4b0615bcf063 a81a86f0a07f20ef6ac34617a9de2819 hg38 Blood Derived Normal C3N-02788-71 -C3N-02788.WXS.T C3N-02788 GBM WXS tumor CPT0206330006 CPT0206330006.WholeExome.RP-1303.bam 24969782426 BAM NA 963d1033-d6d6-43c9-9cdb-86dffd33b25f f66cf8f01d62df74a98fc0c6264593e7 hg19 Primary Tumor C3N-02788-01 C3N-02788.WXS.T.deprecated C3N-02788 GBM WXS tumor CPT0206350009 CPT0206350009.WholeExome.RP-1303.bam 23580643355 BAM NA 00de89fa-7389-4ba6-844d-98f63189499a 42a2d5e7ae3764e6edc20f405213b9ac hg19 Primary Tumor C3N-02788-03 .deprecated -C3N-02788.WXS.T.hg38 C3N-02788 GBM WXS tumor CPT0206330006 7abd92d0-2c6c-4fe7-a411-32349d22d560_wxs_gdc_realn.bam 33937652781 BAM NA 4865666f-0144-4dc2-8d12-0ea2061e80e7 f863637b28d5b10c081ac651638f5f61 hg38 Primary Tumor C3N-02788-01 C3N-02788.WXS.T.hg38.deprecated C3N-02788 GBM WXS tumor CPT0206350009 aa167109-bd98-4b3b-99d8-019e11e988f5_wxs_gdc_realn.bam 32212172650 BAM NA 34dc6412-ae30-444d-8683-2be9eb0f0924 8695d825ebfba5ea1c91facd86be22b2 hg38 Primary Tumor C3N-02788-03 .deprecated +C3N-02788.WXS.T.RDNA_o26YyKX C3N-02788 GBM WXS tumor CPT0206330006 CPT0206330006.WholeExome.RP-1303.bam 24969782426 BAM NA 963d1033-d6d6-43c9-9cdb-86dffd33b25f f66cf8f01d62df74a98fc0c6264593e7 hg19 Primary Tumor C3N-02788-01 replacement_DNA RDNA_o26YyKX Duplicate item: Replacement DNA Distribution - original aliquot failed +C3N-02788.WXS.T.RDNA_o26YyKX.hg38 C3N-02788 GBM WXS tumor CPT0206330006 7abd92d0-2c6c-4fe7-a411-32349d22d560_wxs_gdc_realn.bam 33937652781 BAM NA 4865666f-0144-4dc2-8d12-0ea2061e80e7 f863637b28d5b10c081ac651638f5f61 hg38 Primary Tumor C3N-02788-01 replacement_DNA RDNA_o26YyKX Duplicate item: Replacement DNA Distribution - original aliquot failed C3N-02789.MethArray.Green.T C3N-02789 UCEC Methylation Array tumor CPT0186010007 203561620153_R06C01_Grn.idat 13676211 IDAT Green 194d7685-bab1-430f-b1ad-563694a8225e 89bc9adf7abb44225b56f041eb66ce7b NA Primary Tumor C3N-02789-01 C3N-02789.MethArray.Red.T C3N-02789 UCEC Methylation Array tumor CPT0186010007 203561620153_R06C01_Red.idat 13676211 IDAT Red bb9d450f-8c89-4f3a-bad8-b9873f5afc07 ba8046f4d434b50dcd2fad83a7f2112e NA Primary Tumor C3N-02789-01 C3N-02789.miRNA-Seq.T C3N-02789 UCEC miRNA-Seq tumor CPT0186010010 190508_UNC31-K00269_0215_BH7FYKBBXY_GTGAAA_S19_L003_R1_001.unaln.bam 204083880 BAM NA a6085fa8-9081-4796-9d0a-5252cbf3c3de 37ae8054e5775e6ca66ef4be32934149 NA Primary Tumor C3N-02789-01 @@ -29095,6 +29121,8 @@ C3N-02929.WXS.N C3N-02929 LUAD WXS blood_normal CPT0184800002 CPT0184800002.Whol C3N-02929.WXS.N.hg38 C3N-02929 LUAD WXS blood_normal CPT0184800002 414fe559-b577-4021-988d-edf42348185d_wxs_gdc_realn.bam 32190584639 BAM NA 864a3d57-5ac4-4c39-9e16-6720f7985633 a3600f5f8ec2bb38fb5fe319b5279719 hg38 Blood Derived Normal C3N-02929-31 C3N-02929.WXS.T C3N-02929 LUAD WXS tumor CPT0184740007 CPT0184740007.WholeExome.RP-1303.bam 18398967738 BAM NA 2a247459-970c-47fa-90a5-ae276f4f866a 51dc85176b266b75909efbc690216008 hg19 Primary Tumor C3N-02929-01,C3N-02929-02 C3N-02929.WXS.T.hg38 C3N-02929 LUAD WXS tumor CPT0184740007 94f45d68-628c-4d05-a253-85d4a19284e6_wxs_gdc_realn.bam 25768139029 BAM NA 39b71d68-828c-4a9c-a69e-ea091172401e e210fdd93dec879ae72190601fe05f92 hg38 Primary Tumor C3N-02929-01,C3N-02929-02 +C3N-02930.RNA-Seq.R1.T C3N-02930 PDA RNA-Seq tumor CPT0184810034 200807_UNC32-K00270_0255_AHHY2WBBXY_CAATTAAC-CGAGATAT_S5_L006_R1_001.fastq.gz 5164758172 FASTQ NA 6d20ad09-33cb-4eb3-bd90-a089cdac81f1 f742a976cf1c846ddd3c86d992d57247 NA Primary Tumor C3N-02930-01 +C3N-02930.RNA-Seq.R2.T C3N-02930 PDA RNA-Seq tumor CPT0184810034 200807_UNC32-K00270_0255_AHHY2WBBXY_CAATTAAC-CGAGATAT_S5_L006_R2_001.fastq.gz 5580827454 FASTQ NA 606995fe-dd65-4648-bffa-23b2b9b37677 45d5f319c2b08d68bc599a927adfbde4 NA Primary Tumor C3N-02930-01 C3N-02939.MethArray.Green.A C3N-02939 PDA Methylation Array tissue_normal CPT0208500007 203561620159_R07C01_Grn.idat 13676216 IDAT Green ecbf50fb-5c39-43e7-9f03-49129e62f019 635f52bf7e9e3a6f2a4f7caf84863cb3 NA Solid Tissue Normal C3N-02939-03 C3N-02939.MethArray.Green.T C3N-02939 PDA Methylation Array tumor CPT0208480008 203561450008_R01C01_Grn.idat 13676236 IDAT Green b16c21f2-afe6-4136-bf8d-19daee2e44fb 18ea732623ba16b582eaf932a8987b39 NA Primary Tumor C3N-02939-01,C3N-02939-02 C3N-02939.MethArray.Red.A C3N-02939 PDA Methylation Array tissue_normal CPT0208500007 203561620159_R07C01_Red.idat 13676216 IDAT Red b997ac95-9ad1-44d2-a8fa-08339c85018a 54d80fdf69f2ae5d341651a171e5f568 NA Solid Tissue Normal C3N-02939-03 @@ -29379,8 +29407,10 @@ C3N-02994.WXS.N C3N-02994 UCEC WXS blood_normal CPT0248020002 CPT0248020002.Whol C3N-02994.WXS.N.hg38 C3N-02994 UCEC WXS blood_normal CPT0248020002 817230ce-0900-4cca-b699-52f2934b6c94_wxs_gdc_realn.bam 31825877339 BAM NA 5461a238-4778-4bea-b005-ccd62f2a1459 4573a5b60490b1902652d76902467854 hg38 Blood Derived Normal C3N-02994-31 C3N-02994.WXS.T C3N-02994 UCEC WXS tumor CPT0248000006 CPT0248000006.WholeExome.RP-1303.bam 25292492968 BAM NA 3f76a382-98a6-47a7-9af7-6e011526ac0b 5681cada21afba089136ae230e932f38 hg19 Primary Tumor C3N-02994-01 C3N-02994.WXS.T.hg38 C3N-02994 UCEC WXS tumor CPT0248000006 6e080613-cb5b-47b4-a1cc-8fb789dd31da_wxs_gdc_realn.bam 35356118056 BAM NA ad9b2102-5fc0-4641-9c45-a00f6ea48f71 200fcf4ee5e25b476e0efe8a880351c0 hg38 Primary Tumor C3N-02994-01 -C3N-02997.MethArray.Green.T.core C3N-02997 PDA Methylation Array tumor CPT0187880023 203561450023_R03C01_Grn.idat 13676221 IDAT Green 04eb4f3f-1ac9-49b7-beac-ebc4364957c2 e22f79cd5400d6dac6f0c00be930cb3b NA Primary Tumor C3N-02997-01 .core -C3N-02997.MethArray.Red.T.core C3N-02997 PDA Methylation Array tumor CPT0187880023 203561450023_R03C01_Red.idat 13676221 IDAT Red 4e98b347-eed9-4724-8824-d32228a344f2 58520673375a163f28fdf8461d115f8f NA Primary Tumor C3N-02997-01 .core +C3N-02996.RNA-Seq.R1.T C3N-02996 PDA RNA-Seq tumor CPT0187820029 200807_UNC32-K00270_0255_AHHY2WBBXY_ACAGGCGC-CTCTGCCT_S1_L005_R1_001.fastq.gz 5528271075 FASTQ NA 7dd43710-d433-4d6d-a13f-00d1b502e41c d0a3efef5b9ccfad8a7aa58d6972fca5 NA Primary Tumor C3N-02996-02 +C3N-02996.RNA-Seq.R2.T C3N-02996 PDA RNA-Seq tumor CPT0187820029 200807_UNC32-K00270_0255_AHHY2WBBXY_ACAGGCGC-CTCTGCCT_S1_L005_R2_001.fastq.gz 6280611223 FASTQ NA 0f5dcdca-0bd9-4440-8799-ed1e20b15054 055b437704d97a7ad3c6d2872457c419 NA Primary Tumor C3N-02996-02 +C3N-02997.MethArray.Green.T.CORE_M8JZn2A.core C3N-02997 PDA Methylation Array tumor CPT0187880023 203561450023_R03C01_Grn.idat 13676221 IDAT Green 04eb4f3f-1ac9-49b7-beac-ebc4364957c2 e22f79cd5400d6dac6f0c00be930cb3b NA Primary Tumor C3N-02997-01 .core core_DNA CORE_M8JZn2A Duplicate item: PDA Pilot - core-derived DNA +C3N-02997.MethArray.Red.T.CORE_M8JZn2A.core C3N-02997 PDA Methylation Array tumor CPT0187880023 203561450023_R03C01_Red.idat 13676221 IDAT Red 4e98b347-eed9-4724-8824-d32228a344f2 58520673375a163f28fdf8461d115f8f NA Primary Tumor C3N-02997-01 .core core_DNA CORE_M8JZn2A Duplicate item: PDA Pilot - core-derived DNA C3N-02997.miRNA-Seq.T C3N-02997 PDA miRNA-Seq tumor CPT0187880020 190108_UNC31-K00269_0176_AHYGLVBBXX_TGACCA_S4_L002_R1_001.unaln.bam 188904182 BAM NA 5fb3c51f-52b9-41eb-b307-2369ec7c2914 55bd82edcadd64481ceda6ba757420a6 NA Primary Tumor C3N-02997-01 C3N-02997.miRNA-Seq.T.hg38 C3N-02997 PDA miRNA-Seq tumor CPT0187880020 1eeedacb-6e4e-47fd-a701-7a753afdf83f_mirnaseq_gdc_realn.bam 211693903 BAM NA 80dbe77f-da51-46d5-b822-183291d01611 a8fd99ab8139c3f8ea4450770325b3a1 hg38 Primary Tumor C3N-02997-01 C3N-02997.RNA-Seq.chimeric.T.hg38 C3N-02997 PDA RNA-Seq tumor CPT0187880020 06302bba-022f-41a2-8011-8192560a185e.rna_seq.chimeric.gdc_realn.bam 23895552 BAM chimeric 2369c316-3cd4-41de-9548-72c1915959ba f3943886efacaf3d966342b9ea9476f1 hg38 Primary Tumor C3N-02997-01 @@ -29390,16 +29420,16 @@ C3N-02997.RNA-Seq.R2.T C3N-02997 PDA RNA-Seq tumor CPT0187880020 190115_UNC31-K0 C3N-02997.RNA-Seq.transcriptome.T.hg38 C3N-02997 PDA RNA-Seq tumor CPT0187880020 06302bba-022f-41a2-8011-8192560a185e.rna_seq.transcriptome.gdc_realn.bam 8442046583 BAM transcriptome aed6e80b-5f66-4ba1-9953-0e369b81702f 39e69cfb1d8a11b29f84a2dbf581c1d3 hg38 Primary Tumor C3N-02997-01 C3N-02997.WGS.N C3N-02997 PDA WGS blood_normal CPT0187920002 CPT0187920002.WholeGenome.RP-1303.bam 64560886943 BAM NA 570d4435-e312-45fe-8488-8f9948aee7df ea2427f42085a60b4d57ebf20c1b1ec7 hg19 Blood Derived Normal C3N-02997-31 C3N-02997.WGS.N.hg38 C3N-02997 PDA WGS blood_normal CPT0187920002 ec85c30a-c8b0-4610-944a-85e223670cd6_wgs_gdc_realn.bam 92624705727 BAM NA 421461bc-6177-4cbb-a9cc-c98cf68b91aa 57c5c2672941fa037759326bb803fea6 hg38 Blood Derived Normal C3N-02997-31 -C3N-02997.WGS.T C3N-02997 PDA WGS tumor CPT0187880029 CPT0187880029.WholeGenome.RP-1303.bam 128295224132 BAM NA 0873ddcb-6084-4e83-8470-077e1dbeda44 1a91beb18ab8749a3d4828d55d3d624c hg19 Primary Tumor C3N-02997-01 -C3N-02997.WGS.T.core C3N-02997 PDA WGS tumor CPT0187880023 CPT0187880023.WholeGenome.RP-1303.bam 64503080897 BAM NA d8ed3017-c630-414c-8193-b31014ef7892 02d78aeff64588b7cc3afd9ea1bdea26 hg19 Primary Tumor C3N-02997-01 .core -C3N-02997.WGS.T.hg38 C3N-02997 PDA WGS tumor CPT0187880029 f4651bfd-45a2-4d90-a791-3a6ea57fac74_wgs_gdc_realn.bam 188158529926 BAM NA 69501e96-93b0-4fe3-8232-1ff84a129741 47ac8485b07656e81c1c4597563db0e9 hg38 Primary Tumor C3N-02997-01 -C3N-02997.WGS.T.hg38.core C3N-02997 PDA WGS tumor CPT0187880023 50dedea3-c620-45ad-b9e5-bbb225fc23a2_wgs_gdc_realn.bam 93086644191 BAM NA e1840a43-7505-415f-9732-41110c300215 c61ba0fe04a0f989f269882490387478 hg38 Primary Tumor C3N-02997-01 .core +C3N-02997.WGS.T.BULK_VO7vzkM C3N-02997 PDA WGS tumor CPT0187880029 CPT0187880029.WholeGenome.RP-1303.bam 128295224132 BAM NA 0873ddcb-6084-4e83-8470-077e1dbeda44 1a91beb18ab8749a3d4828d55d3d624c hg19 Primary Tumor C3N-02997-01 bulk_DNA BULK_VO7vzkM Duplicate item: PDA Pilot - bulk-derived DNA +C3N-02997.WGS.T.BULK_VO7vzkM.hg38 C3N-02997 PDA WGS tumor CPT0187880029 f4651bfd-45a2-4d90-a791-3a6ea57fac74_wgs_gdc_realn.bam 188158529926 BAM NA 69501e96-93b0-4fe3-8232-1ff84a129741 47ac8485b07656e81c1c4597563db0e9 hg38 Primary Tumor C3N-02997-01 bulk_DNA BULK_VO7vzkM Duplicate item: PDA Pilot - bulk-derived DNA +C3N-02997.WGS.T.CORE_M8JZn2A.core C3N-02997 PDA WGS tumor CPT0187880023 CPT0187880023.WholeGenome.RP-1303.bam 64503080897 BAM NA d8ed3017-c630-414c-8193-b31014ef7892 02d78aeff64588b7cc3afd9ea1bdea26 hg19 Primary Tumor C3N-02997-01 .core core_DNA CORE_M8JZn2A Duplicate item: PDA Pilot - core-derived DNA +C3N-02997.WGS.T.CORE_M8JZn2A.hg38.core C3N-02997 PDA WGS tumor CPT0187880023 50dedea3-c620-45ad-b9e5-bbb225fc23a2_wgs_gdc_realn.bam 93086644191 BAM NA e1840a43-7505-415f-9732-41110c300215 c61ba0fe04a0f989f269882490387478 hg38 Primary Tumor C3N-02997-01 .core core_DNA CORE_M8JZn2A Duplicate item: PDA Pilot - core-derived DNA C3N-02997.WXS.N C3N-02997 PDA WXS blood_normal CPT0187920002 CPT0187920002.WholeExome.RP-1303.bam 24446342493 BAM NA 1252179f-34e9-4028-bead-bd41a38300b5 70e850f0346ef024b9b3e844a36a0abd hg19 Blood Derived Normal C3N-02997-31 C3N-02997.WXS.N.hg38 C3N-02997 PDA WXS blood_normal CPT0187920002 ec85c30a-c8b0-4610-944a-85e223670cd6_wxs_gdc_realn.bam 33307097960 BAM NA d85499af-013d-4afd-9be4-263b92a2f996 75e74ef41a1b76496bf0f84f7ea53219 hg38 Blood Derived Normal C3N-02997-31 -C3N-02997.WXS.T.core.high_cov C3N-02997 PDA WXS tumor CPT0187880023 CPT0187880023.WholeExome.RP-1303.bam 68430515342 BAM NA e2f3e9a7-4c76-491f-a733-9513f00e5b4a d5edc2c03b97ffa74d87c168a71a6a59 hg19 Primary Tumor C3N-02997-01 .core.high_cov -C3N-02997.WXS.T.hg38.core.high_cov C3N-02997 PDA WXS tumor CPT0187880023 50dedea3-c620-45ad-b9e5-bbb225fc23a2_wxs_gdc_realn.bam 94310236916 BAM NA d74a9a1a-62a2-4b30-b0d0-1447b9021fd2 dc7e708549f217d56c85dc598b54bf8d hg38 Primary Tumor C3N-02997-01 .core.high_cov -C3N-02997.WXS.T.hg38.high_cov C3N-02997 PDA WXS tumor CPT0187880029 f4651bfd-45a2-4d90-a791-3a6ea57fac74_wxs_gdc_realn.bam 61514647521 BAM NA 33fbb651-d2ac-491e-9e61-bdaae9adc2db ef27c289f122ddbc50f79dc493243522 hg38 Primary Tumor C3N-02997-01 .high_cov -C3N-02997.WXS.T.high_cov C3N-02997 PDA WXS tumor CPT0187880029 CPT0187880029.WholeExome.RP-1303.bam 43567205475 BAM NA 7b4a54d0-a1dc-4327-98a5-b52ca16d1d41 703c881c2d3f542b5f6ccbe40869ab1e hg19 Primary Tumor C3N-02997-01 .high_cov +C3N-02997.WXS.T.BULK_VO7vzkM.hg38.high_cov C3N-02997 PDA WXS tumor CPT0187880029 f4651bfd-45a2-4d90-a791-3a6ea57fac74_wxs_gdc_realn.bam 61514647521 BAM NA 33fbb651-d2ac-491e-9e61-bdaae9adc2db ef27c289f122ddbc50f79dc493243522 hg38 Primary Tumor C3N-02997-01 .high_cov bulk_DNA BULK_VO7vzkM Duplicate item: PDA Pilot - bulk-derived DNA +C3N-02997.WXS.T.BULK_VO7vzkM.high_cov C3N-02997 PDA WXS tumor CPT0187880029 CPT0187880029.WholeExome.RP-1303.bam 43567205475 BAM NA 7b4a54d0-a1dc-4327-98a5-b52ca16d1d41 703c881c2d3f542b5f6ccbe40869ab1e hg19 Primary Tumor C3N-02997-01 .high_cov bulk_DNA BULK_VO7vzkM Duplicate item: PDA Pilot - bulk-derived DNA +C3N-02997.WXS.T.CORE_M8JZn2A.core.high_cov C3N-02997 PDA WXS tumor CPT0187880023 CPT0187880023.WholeExome.RP-1303.bam 68430515342 BAM NA e2f3e9a7-4c76-491f-a733-9513f00e5b4a d5edc2c03b97ffa74d87c168a71a6a59 hg19 Primary Tumor C3N-02997-01 .core.high_cov core_DNA CORE_M8JZn2A Duplicate item: PDA Pilot - core-derived DNA +C3N-02997.WXS.T.CORE_M8JZn2A.hg38.core.high_cov C3N-02997 PDA WXS tumor CPT0187880023 50dedea3-c620-45ad-b9e5-bbb225fc23a2_wxs_gdc_realn.bam 94310236916 BAM NA d74a9a1a-62a2-4b30-b0d0-1447b9021fd2 dc7e708549f217d56c85dc598b54bf8d hg38 Primary Tumor C3N-02997-01 .core.high_cov core_DNA CORE_M8JZn2A Duplicate item: PDA Pilot - core-derived DNA C3N-02998.MethArray.Green.T C3N-02998 PDA Methylation Array tumor CPT0187930008 203561620077_R01C01_Grn.idat 13676214 IDAT Green a5983d0a-bf2a-40b1-94ec-790fc181ebb1 504df97e34fa8b23ed02197a7ceaa4a3 NA Primary Tumor C3N-02998-03 C3N-02998.MethArray.Red.T C3N-02998 PDA Methylation Array tumor CPT0187930008 203561620077_R01C01_Red.idat 13676214 IDAT Red 1f0628ad-2055-4073-9466-e8e1fdde2588 9085908c1fbd255be1ac6072219e4045 NA Primary Tumor C3N-02998-03 C3N-02998.miRNA-Seq.T C3N-02998 PDA miRNA-Seq tumor CPT0187930011 190828_UNC32-K00270_0200_BH7GVJBBXY_ATTCCT_S149_L007_R1_001.unaln.bam 193665924 BAM NA 4a74c685-8a11-4a7c-ba1e-084219741373 fb846c4cf83b747e087d0fec5db564bd NA Primary Tumor C3N-02998-03 @@ -29858,20 +29888,20 @@ C3N-03042.WXS.N C3N-03042 HNSCC WXS blood_normal CPT0235610002 CPT0235610002.Who C3N-03042.WXS.N.hg38 C3N-03042 HNSCC WXS blood_normal CPT0235610002 d48dae04-e90c-461b-a8eb-80722051857c_wxs_gdc_realn.bam 33423811815 BAM NA f100d754-c2c6-486e-ade6-263a0ac4a415 0c2040dd268b94c15bb5b130057dda90 hg38 Blood Derived Normal C3N-03042-71 C3N-03042.WXS.T C3N-03042 HNSCC WXS tumor CPT0235460006 CPT0235460006.WholeExome.RP-1303.bam 25049510455 BAM NA e20fc429-b2a6-4f08-8aa3-460c4e83cf94 1dfeb77f7268dbb967794a658e9c4f64 hg19 Primary Tumor C3N-03042-04 C3N-03042.WXS.T.hg38 C3N-03042 HNSCC WXS tumor CPT0235460006 385ba2e4-215b-41d3-898f-70ce3b49122a_wxs_gdc_realn.bam 35970374203 BAM NA 78a89d30-eb59-4b4e-a7d5-50435b2c6740 61711870f441841dd49513c5785bdf5f hg38 Primary Tumor C3N-03042-04 -C3N-03044.miRNA-Seq.T.deprecated C3N-03044 UCEC miRNA-Seq tumor CPT0235720023 190508_UNC31-K00269_0215_BH7FYKBBXY_TAATCG_S42_L002_R1_001.unaln.bam 210091631 BAM NA 8c82c53b-a983-4195-9cd9-b238829d6631 b171fe7138b57e46389cbe36c352744f NA Primary Tumor C3N-03044-02 .deprecated -C3N-03044.miRNA-Seq.T.deprecated C3N-03044 UCEC miRNA-Seq tumor CPT0235730040 190508_UNC31-K00269_0215_BH7FYKBBXY_TACAGC_S43_L002_R1_001.unaln.bam 258538636 BAM NA b0ce47a0-34c1-4f25-8b3e-9e67c9e88b55 0840bfc57b224ec03bc09209398e73aa NA Primary Tumor C3N-03044-03 .deprecated -C3N-03044.miRNA-Seq.T.hg38.deprecated C3N-03044 UCEC miRNA-Seq tumor CPT0235720023 316f93ad-32ee-4eca-85ad-7624a099254a_mirnaseq_gdc_realn.bam 234302210 BAM NA fee10f49-db41-4b77-bb89-2beb8381b06b 89d119f2572b7be61d26163a9f658824 hg38 Primary Tumor C3N-03044-02 .deprecated -C3N-03044.miRNA-Seq.T.hg38.deprecated C3N-03044 UCEC miRNA-Seq tumor CPT0235730040 a6ce9d45-7de2-4b03-9e27-8cf03a3c7b19_mirnaseq_gdc_realn.bam 285787402 BAM NA 7f99812a-52d1-4cf6-964f-2722684a857d 0fc9f8353e5b91bfd86127b7fb6f0bb3 hg38 Primary Tumor C3N-03044-03 .deprecated -C3N-03044.RNA-Seq.chimeric.T.hg38.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235720023 f8eee64a-3187-472f-ab9a-51092484b354.rna_seq.chimeric.gdc_realn.bam 29644590 BAM chimeric aded4537-64a8-4000-8969-ba33b5e02072 7fabad4bc2b6c2b8231ca92f197f63ad hg38 Primary Tumor C3N-03044-02 .deprecated -C3N-03044.RNA-Seq.chimeric.T.hg38.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235730040 bae25404-15a6-42bf-bfae-4d247472d2cc.rna_seq.chimeric.gdc_realn.bam 34050783 BAM chimeric 6f4c3d49-0872-4d6a-a334-332d26249705 233d383afd6d621149ce69ff25f97b89 hg38 Primary Tumor C3N-03044-03 .deprecated -C3N-03044.RNA-Seq.genomic.T.hg38.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235720023 f8eee64a-3187-472f-ab9a-51092484b354.rna_seq.genomic.gdc_realn.bam 7210106340 BAM genomic d489e277-abf3-4ed3-b50f-33b37c7f304d 8b03aa9f3cc72bb644ec2014d32caa93 hg38 Primary Tumor C3N-03044-02 .deprecated -C3N-03044.RNA-Seq.genomic.T.hg38.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235730040 bae25404-15a6-42bf-bfae-4d247472d2cc.rna_seq.genomic.gdc_realn.bam 8214255585 BAM genomic e820ccfd-4f69-4d38-b577-aa7e90e05d5b 8b0388fa869ef037b8386a0dfc797069 hg38 Primary Tumor C3N-03044-03 .deprecated -C3N-03044.RNA-Seq.R1.T.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235720023 190501_UNC31-K00269_0213_BH5JYFBBXY_GCGCAAGC-TCACGCCG_S28_L007_R1_001.fastq.gz 3372156198 FASTQ NA 7b67cfae-f36c-4ca8-9b52-fd13fd009f90 e47b0feab4321b61d7d8c16cfeac2d50 NA Primary Tumor C3N-03044-02 .deprecated -C3N-03044.RNA-Seq.R1.T.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235730040 190501_UNC31-K00269_0213_BH5JYFBBXY_AAGATACT-ACTTACAT_S27_L007_R1_001.fastq.gz 4112644391 FASTQ NA 635dfd92-32d9-4efd-b888-a90acda562f6 b23ec9e12de44f9b2e52c65e1a32d8c7 NA Primary Tumor C3N-03044-03 .deprecated -C3N-03044.RNA-Seq.R2.T.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235720023 190501_UNC31-K00269_0213_BH5JYFBBXY_GCGCAAGC-TCACGCCG_S28_L007_R2_001.fastq.gz 3731757645 FASTQ NA ef49d83c-9edc-4fb2-a2e3-bd7193041582 0ca26d9fc23d30342a125173f7515eaf NA Primary Tumor C3N-03044-02 .deprecated -C3N-03044.RNA-Seq.R2.T.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235730040 190501_UNC31-K00269_0213_BH5JYFBBXY_AAGATACT-ACTTACAT_S27_L007_R2_001.fastq.gz 4608523488 FASTQ NA 74bc5cee-2633-4d27-ab8b-1ed835be5808 5e4e15f7ec635d3064962e27340b705a NA Primary Tumor C3N-03044-03 .deprecated -C3N-03044.RNA-Seq.transcriptome.T.hg38.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235720023 f8eee64a-3187-472f-ab9a-51092484b354.rna_seq.transcriptome.gdc_realn.bam 8583159597 BAM transcriptome 637fb862-949f-4af2-bd42-2854706a0346 1f00a4872387a4d40201b117ba72d78b hg38 Primary Tumor C3N-03044-02 .deprecated -C3N-03044.RNA-Seq.transcriptome.T.hg38.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235730040 bae25404-15a6-42bf-bfae-4d247472d2cc.rna_seq.transcriptome.gdc_realn.bam 10789164400 BAM transcriptome 5d8a3bd1-4547-4a6d-a525-baee2e8ee825 82314ba5c9c7241872685a026d3a2ec9 hg38 Primary Tumor C3N-03044-03 .deprecated +C3N-03044.miRNA-Seq.T.BIOTEXT_73zoYyj.deprecated C3N-03044 UCEC miRNA-Seq tumor CPT0235730040 190508_UNC31-K00269_0215_BH7FYKBBXY_TACAGC_S43_L002_R1_001.unaln.bam 258538636 BAM NA b0ce47a0-34c1-4f25-8b3e-9e67c9e88b55 0840bfc57b224ec03bc09209398e73aa NA Primary Tumor C3N-03044-03 .deprecated BioTEXT BIOTEXT_73zoYyj Duplicate item: UCEC BioTEXT Pilot +C3N-03044.miRNA-Seq.T.BIOTEXT_73zoYyj.hg38.deprecated C3N-03044 UCEC miRNA-Seq tumor CPT0235730040 a6ce9d45-7de2-4b03-9e27-8cf03a3c7b19_mirnaseq_gdc_realn.bam 285787402 BAM NA 7f99812a-52d1-4cf6-964f-2722684a857d 0fc9f8353e5b91bfd86127b7fb6f0bb3 hg38 Primary Tumor C3N-03044-03 .deprecated BioTEXT BIOTEXT_73zoYyj Duplicate item: UCEC BioTEXT Pilot +C3N-03044.miRNA-Seq.T.BIOTEXT_M8gR9E5.deprecated C3N-03044 UCEC miRNA-Seq tumor CPT0235720023 190508_UNC31-K00269_0215_BH7FYKBBXY_TAATCG_S42_L002_R1_001.unaln.bam 210091631 BAM NA 8c82c53b-a983-4195-9cd9-b238829d6631 b171fe7138b57e46389cbe36c352744f NA Primary Tumor C3N-03044-02 .deprecated BioTEXT BIOTEXT_M8gR9E5 Duplicate item: UCEC BioTEXT Pilot +C3N-03044.miRNA-Seq.T.BIOTEXT_M8gR9E5.hg38.deprecated C3N-03044 UCEC miRNA-Seq tumor CPT0235720023 316f93ad-32ee-4eca-85ad-7624a099254a_mirnaseq_gdc_realn.bam 234302210 BAM NA fee10f49-db41-4b77-bb89-2beb8381b06b 89d119f2572b7be61d26163a9f658824 hg38 Primary Tumor C3N-03044-02 .deprecated BioTEXT BIOTEXT_M8gR9E5 Duplicate item: UCEC BioTEXT Pilot +C3N-03044.RNA-Seq.chimeric.T.BIOTEXT_73zoYyj.hg38.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235730040 bae25404-15a6-42bf-bfae-4d247472d2cc.rna_seq.chimeric.gdc_realn.bam 34050783 BAM chimeric 6f4c3d49-0872-4d6a-a334-332d26249705 233d383afd6d621149ce69ff25f97b89 hg38 Primary Tumor C3N-03044-03 .deprecated BioTEXT BIOTEXT_73zoYyj Duplicate item: UCEC BioTEXT Pilot +C3N-03044.RNA-Seq.chimeric.T.BIOTEXT_M8gR9E5.hg38.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235720023 f8eee64a-3187-472f-ab9a-51092484b354.rna_seq.chimeric.gdc_realn.bam 29644590 BAM chimeric aded4537-64a8-4000-8969-ba33b5e02072 7fabad4bc2b6c2b8231ca92f197f63ad hg38 Primary Tumor C3N-03044-02 .deprecated BioTEXT BIOTEXT_M8gR9E5 Duplicate item: UCEC BioTEXT Pilot +C3N-03044.RNA-Seq.genomic.T.BIOTEXT_73zoYyj.hg38.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235730040 bae25404-15a6-42bf-bfae-4d247472d2cc.rna_seq.genomic.gdc_realn.bam 8214255585 BAM genomic e820ccfd-4f69-4d38-b577-aa7e90e05d5b 8b0388fa869ef037b8386a0dfc797069 hg38 Primary Tumor C3N-03044-03 .deprecated BioTEXT BIOTEXT_73zoYyj Duplicate item: UCEC BioTEXT Pilot +C3N-03044.RNA-Seq.genomic.T.BIOTEXT_M8gR9E5.hg38.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235720023 f8eee64a-3187-472f-ab9a-51092484b354.rna_seq.genomic.gdc_realn.bam 7210106340 BAM genomic d489e277-abf3-4ed3-b50f-33b37c7f304d 8b03aa9f3cc72bb644ec2014d32caa93 hg38 Primary Tumor C3N-03044-02 .deprecated BioTEXT BIOTEXT_M8gR9E5 Duplicate item: UCEC BioTEXT Pilot +C3N-03044.RNA-Seq.R1.T.BIOTEXT_73zoYyj.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235730040 190501_UNC31-K00269_0213_BH5JYFBBXY_AAGATACT-ACTTACAT_S27_L007_R1_001.fastq.gz 4112644391 FASTQ NA 635dfd92-32d9-4efd-b888-a90acda562f6 b23ec9e12de44f9b2e52c65e1a32d8c7 NA Primary Tumor C3N-03044-03 .deprecated BioTEXT BIOTEXT_73zoYyj Duplicate item: UCEC BioTEXT Pilot +C3N-03044.RNA-Seq.R1.T.BIOTEXT_M8gR9E5.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235720023 190501_UNC31-K00269_0213_BH5JYFBBXY_GCGCAAGC-TCACGCCG_S28_L007_R1_001.fastq.gz 3372156198 FASTQ NA 7b67cfae-f36c-4ca8-9b52-fd13fd009f90 e47b0feab4321b61d7d8c16cfeac2d50 NA Primary Tumor C3N-03044-02 .deprecated BioTEXT BIOTEXT_M8gR9E5 Duplicate item: UCEC BioTEXT Pilot +C3N-03044.RNA-Seq.R2.T.BIOTEXT_73zoYyj.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235730040 190501_UNC31-K00269_0213_BH5JYFBBXY_AAGATACT-ACTTACAT_S27_L007_R2_001.fastq.gz 4608523488 FASTQ NA 74bc5cee-2633-4d27-ab8b-1ed835be5808 5e4e15f7ec635d3064962e27340b705a NA Primary Tumor C3N-03044-03 .deprecated BioTEXT BIOTEXT_73zoYyj Duplicate item: UCEC BioTEXT Pilot +C3N-03044.RNA-Seq.R2.T.BIOTEXT_M8gR9E5.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235720023 190501_UNC31-K00269_0213_BH5JYFBBXY_GCGCAAGC-TCACGCCG_S28_L007_R2_001.fastq.gz 3731757645 FASTQ NA ef49d83c-9edc-4fb2-a2e3-bd7193041582 0ca26d9fc23d30342a125173f7515eaf NA Primary Tumor C3N-03044-02 .deprecated BioTEXT BIOTEXT_M8gR9E5 Duplicate item: UCEC BioTEXT Pilot +C3N-03044.RNA-Seq.transcriptome.T.BIOTEXT_73zoYyj.hg38.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235730040 bae25404-15a6-42bf-bfae-4d247472d2cc.rna_seq.transcriptome.gdc_realn.bam 10789164400 BAM transcriptome 5d8a3bd1-4547-4a6d-a525-baee2e8ee825 82314ba5c9c7241872685a026d3a2ec9 hg38 Primary Tumor C3N-03044-03 .deprecated BioTEXT BIOTEXT_73zoYyj Duplicate item: UCEC BioTEXT Pilot +C3N-03044.RNA-Seq.transcriptome.T.BIOTEXT_M8gR9E5.hg38.deprecated C3N-03044 UCEC RNA-Seq tumor CPT0235720023 f8eee64a-3187-472f-ab9a-51092484b354.rna_seq.transcriptome.gdc_realn.bam 8583159597 BAM transcriptome 637fb862-949f-4af2-bd42-2854706a0346 1f00a4872387a4d40201b117ba72d78b hg38 Primary Tumor C3N-03044-02 .deprecated BioTEXT BIOTEXT_M8gR9E5 Duplicate item: UCEC BioTEXT Pilot C3N-03045.MethArray.Green.T C3N-03045 HNSCC Methylation Array tumor CPT0235910006 203219650096_R06C01_Grn.idat 13676211 IDAT Green 84ea750a-d0b6-428a-9c6a-44b891c44746 a3eb270bedd6dd4c5bd7be6f15339b80 NA Primary Tumor C3N-03045-01 C3N-03045.MethArray.Red.T C3N-03045 HNSCC Methylation Array tumor CPT0235910006 203219650096_R06C01_Red.idat 13676211 IDAT Red 998daa5c-b485-461a-b7d6-7413156c0116 40948490138a05f063ad3116dfaaba87 NA Primary Tumor C3N-03045-01 C3N-03045.miRNA-Seq.A C3N-03045 HNSCC miRNA-Seq tissue_normal CPT0235920006 190828_UNC32-K00270_0200_BH7GVJBBXY_ATCACG_S138_L007_R1_001.unaln.bam 334514760 BAM NA e494a771-7ef6-43eb-901a-abb9aad58495 a08f6aa3fc980536c117ca9f72d7c3fe NA Solid Tissue Normal C3N-03045-02