diff --git a/DCC_Analysis_Summary/RNA-Seq_Transcript.DCC_analysis_summary.dat b/DCC_Analysis_Summary/RNA-Seq_Transcript.DCC_analysis_summary.dat index eadb82a..7f96319 100644 --- a/DCC_Analysis_Summary/RNA-Seq_Transcript.DCC_analysis_summary.dat +++ b/DCC_Analysis_Summary/RNA-Seq_Transcript.DCC_analysis_summary.dat @@ -161,10 +161,19 @@ C3L-00447 CCRCC RNA-Seq_Transcript v1.3 20201217 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC C3L-00448 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-00448.tissue_normal.transcripts.gtf.gz 21364861 gtf 2d228be4d0504811aa6c69eb1a39d292 tissue_normal C3L-00448.RNA-Seq.R1.A 6e349078-0a09-424f-b71a-8b7828baef69 C3L-00448.RNA-Seq.R2.A 155f1043-34af-4c84-8f61-0f31e6d74e78 C3L-00448 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-00448.tumor.transcripts.gtf.gz 21792786 gtf ba342b542f4888e49ba9888e33abcbe6 tumor C3L-00448.RNA-Seq.R1.T d1a97b50-e454-4328-9721-c42b5b0fbf77 C3L-00448.RNA-Seq.R2.T f8cb4da2-4715-47ba-b2ce-6ca381286e33 C3L-00449 UCEC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-00449.tumor.transcripts.gtf.gz 20169967 gtf 20d796b0318a064587df060c75ef1dc8 tumor C3L-00449.RNA-Seq.R1.T f77c5bff-f9df-4a57-a2e9-391fcd5a6ba2 C3L-00449.RNA-Seq.R2.T 1faa1af4-b72b-4267-a86a-893fa2f67d7f +C3L-00452 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-00452.gtf.transcripts.gtf.gz 17968684 gtf d5b8cd1416390aaa81957bdb187c50da tumor_bone_marrow C3L-00452.RNA-Seq.R1.Tbm e3bcf26f-ee7e-479e-b957-e5ade5eca769 C3L-00452.RNA-Seq.R2.Tbm 5505543b-e537-4d2a-b0f3-3eef15780673 +C3L-00453 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-00453.gtf.transcripts.gtf.gz 18307866 gtf da3664d9a19cb8a3c9d3f98f06511fe2 tumor_bone_marrow C3L-00453.RNA-Seq.R1.Tbm cee5ec12-9d91-4a34-b9e0-82664a162d63 C3L-00453.RNA-Seq.R2.Tbm 391e6f40-e618-47c5-a577-2f1c49aa7f67 +C3L-00455 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-00455.gtf.transcripts.gtf.gz 20585829 gtf e2f7f30e056dfa20458b2c8cb896e45a tumor_bone_marrow C3L-00455.RNA-Seq.R1.Tbm f0783087-c82a-4b61-aa63-73e600fc9795 C3L-00455.RNA-Seq.R2.Tbm 755b832b-3ed5-413b-b62b-8dd8ed6079b7 +C3L-00457 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-00457.gtf.transcripts.gtf.gz 17125523 gtf 7c981774facd3a301629f69c2f81b38a tumor_bone_marrow C3L-00457.RNA-Seq.R1.Tbm 7fbb57ea-ce5f-460f-926c-bcd3c497d48e C3L-00457.RNA-Seq.R2.Tbm c2c12512-899d-403d-8eee-2bb9b031489b +C3L-00458 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-00458.gtf.transcripts.gtf.gz 19213229 gtf ade80da9fbd091cb325935174d02c6c9 tumor_bone_marrow C3L-00458.RNA-Seq.R1.Tbm b2975393-27f8-41e8-a678-07b90a3911b2 C3L-00458.RNA-Seq.R2.Tbm 62eeaa76-736b-45c8-892d-67587a27288b +C3L-00459 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-00459.gtf.transcripts.gtf.gz 18013414 gtf a52feadc8cbd6ea1043d5ec9616c1293 tumor_bone_marrow C3L-00459.RNA-Seq.R1.Tbm 61333545-45a2-4cfd-b5c8-b95fbbbb875b C3L-00459.RNA-Seq.R2.Tbm 22d6579a-2e1c-4606-b175-e79e8b4d96f6 +C3L-00460 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-00460.gtf.transcripts.gtf.gz 19385990 gtf 0bb5b67946f338c07eac0f4ffa626da8 tumor_bone_marrow C3L-00460.RNA-Seq.R1.Tbm d5771179-7a98-4d85-aea4-eba182579f7f C3L-00460.RNA-Seq.R2.Tbm dad7c54b-cfc7-44c4-887c-9804c31dbb37 +C3L-00465 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-00465.gtf.transcripts.gtf.gz 19475024 gtf f9f7007f9b1422551108ddfb689412d1 tumor_bone_marrow C3L-00465.RNA-Seq.R1.Tbm c8af9b99-a55b-454f-a8fe-1804577dc952 C3L-00465.RNA-Seq.R2.Tbm 9ed627c4-2979-4ec1-80c6-b42bf6b79455 C3L-00503 LSCC RNA-Seq_Transcript v1 20190426 Y2 /CPTAC3.Y2_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1_Y2.b1_20190426/C3L-00503_tissue_normal.transcripts.gtf.gz 19478002 gtf a4278f346b1465cc22e578dc3027c32d tissue_normal C3L-00503.RNA-Seq.R1.A fdce22ee-161a-4432-ae86-7feb24ae101a C3L-00503.RNA-Seq.R2.A 6eb0643b-579d-457a-838a-81f9f2dc72b7 C3L-00503 LSCC RNA-Seq_Transcript v1 20190426 Y2 /CPTAC3.Y2_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1_Y2.b1_20190426/C3L-00503_tumor.transcripts.gtf.gz 19734681 gtf a340bd8227e57af39228d25510a22cd3 tumor C3L-00503.RNA-Seq.R1.T d417ab83-b7a3-4d1f-a449-c5ef3dd1c622 C3L-00503.RNA-Seq.R2.T 4cc1e5db-b9b9-4181-9e63-e1b63e9de28c C3L-00506 GBM RNA-Seq_Transcript v1.0 20190529 Y2 /CPTAC3.Y2_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_Splicing_v1.0_Y2.b2_20190529/C3L-00506_tumor.transcripts.gtf.gz 21697317 gtf 0ba5db2e857c726547170897576a2c7d tumor C3L-00506.RNA-Seq.R1.T c87ff577-885e-4b58-8ae5-01c87a77337a C3L-00506.RNA-Seq.R2.T 3f3fd006-cee8-494e-ba71-98e6134ffdff C3L-00528 GBM RNA-Seq_Transcript v1.0 20190529 Y2 /CPTAC3.Y2_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_Splicing_v1.0_Y2.b2_20190529/C3L-00528_tumor.transcripts.gtf.gz 22228082 gtf 1f7acf5fd9e67d4644c965920370ec74 tumor C3L-00528.RNA-Seq.R1.T 09588a09-bf91-4c35-977b-bc7d02d7de13 C3L-00528.RNA-Seq.R2.T 7b3935ea-c2e1-4ebe-8839-772b6d131fea +C3L-00540 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-00540.gtf.transcripts.gtf.gz 14863414 gtf f09fd9018231073348a4d11cb4002f3d tumor_peripheral_blood C3L-00540.RNA-Seq.R1.Tpb 41832e8e-3b03-4d30-9712-f64608fcbc7d C3L-00540.RNA-Seq.R2.Tpb 132a48bf-35fb-44f6-b5c3-e3ca27975431 C3L-00561 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-00561.tissue_normal.transcripts.gtf.gz 20128320 gtf 8644f02ebc8db63870af364e983e0e34 tissue_normal C3L-00561.RNA-Seq.R1.A a3b123c4-9bdf-44b7-86b9-018ce64c95bb C3L-00561.RNA-Seq.R2.A 1a515eb3-e212-43d9-8bd4-89e3c259bf3a C3L-00561 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-00561.tumor.transcripts.gtf.gz 22827646 gtf 4a8ab6cb6277b01b2907d7aa12845612 tumor C3L-00561.RNA-Seq.R1.T 35c6b8a4-6a15-4e50-9dab-da1c77c77c74 C3L-00561.RNA-Seq.R2.T cf3c559c-9edf-464a-984b-14d4977ccfe5 C3L-00563 UCEC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-00563.tumor.transcripts.gtf.gz 20767549 gtf 747d44541be2ff4bba468a5e63a7be24 tumor C3L-00563.RNA-Seq.R1.T 8b076b0a-e1a0-4215-ab01-2aa7e0a0d947 C3L-00563.RNA-Seq.R2.T 9c892a88-3d18-4757-8c0c-ae75966102c7 @@ -200,6 +209,8 @@ C3L-00607 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC C3L-00607 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-00607.tumor.transcripts.gtf.gz 19355227 gtf 4084a0395df55ee11e5acebc4b835805 tumor C3L-00607.RNA-Seq.R1.T 1029d950-d46f-4ee3-adc7-fcedfaaa9934 C3L-00607.RNA-Seq.R2.T 971e3386-6c90-4819-9eda-78abf0bd8792 C3L-00608 CCRCC RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.4_batch_1021_20211028/C3L-00608.tumor.transcripts.gtf.gz 19216132 gtf 3815796a7ecfadf67e8fdffabc7aa851 tumor C3L-00608.RNA-Seq.R1.T fdcd0f9b-f5b3-48b2-9237-c3bf94ad1dc7 C3L-00608.RNA-Seq.R2.T 8ff2ace2-2f50-4d0d-a54e-adf709e8c2b1 C3L-00610 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-00610.tumor.transcripts.gtf.gz 20162750 gtf 693379a031c4816e4581045b14a654f4 tumor C3L-00610.RNA-Seq.R1.T c0b30aa7-5d95-40a0-aea3-07e351caa9ec C3L-00610.RNA-Seq.R2.T f82c169d-d8f8-4e98-8664-330850a873ce +C3L-00614 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-00614.gtf.transcripts.gtf.gz 16445186 gtf ce491c53411fa270901134edbca8f0b5 tumor_peripheral_blood C3L-00614.RNA-Seq.R1.Tpb 2bf8703d-5fed-4b22-b691-88cfb6878a75 C3L-00614.RNA-Seq.R2.Tpb 08bf4689-a42c-4109-a788-26b0d2b9b71f +C3L-00617 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-00617.gtf.transcripts.gtf.gz 16243834 gtf e50c4720fc563f5f754e42af4dd6fe64 tumor_bone_marrow C3L-00617.RNA-Seq.R1.Tbm 4481a421-93e2-4023-ab56-355dd1c209e4 C3L-00617.RNA-Seq.R2.Tbm 38596d93-afca-4dea-b256-bc13577c67a5 C3L-00622 PDA RNA-Seq_Transcript v1.0 20190529 Y2 /CPTAC3.Y2_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_Splicing_v1.0_Y2.b2_20190529/C3L-00622_tissue_normal.transcripts.gtf.gz 19376961 gtf 0e7fa50cb85a26642301fc1fd1232aff tissue_normal C3L-00622.RNA-Seq.R1.A ee0d436f-ad91-401e-9b1a-8b0633bbbfe9 C3L-00622.RNA-Seq.R2.A a511911a-2894-4e73-bd51-e368bafbff63 C3L-00622 PDA RNA-Seq_Transcript v1.0 20190529 Y2 /CPTAC3.Y2_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_Splicing_v1.0_Y2.b2_20190529/C3L-00622_tumor.transcripts.gtf.gz 21570089 gtf 0da6ba20d0480d29e1edaaf189cf0e6a tumor C3L-00622.RNA-Seq.R1.T 49777911-e523-49e1-b3cd-8c9c7691a5d2 C3L-00622.RNA-Seq.R2.T c273c1af-0c01-462a-baf6-6503fc50bbec C3L-00625 PDA RNA-Seq_Transcript v1.0 20190529 Y2 /CPTAC3.Y2_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_Splicing_v1.0_Y2.b2_20190529/C3L-00625_tumor.transcripts.gtf.gz 19813227 gtf 146c659fe1cb0803a34f465f0160b05c tumor C3L-00625.RNA-Seq.R1.T 637a1123-2d19-4fb8-8c2b-62b5244519c7 C3L-00625.RNA-Seq.R2.T cc431b64-163e-4e98-a110-cb5692802d83 @@ -226,6 +237,8 @@ C3L-00795 CCRCC RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC C3L-00796 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-00796.tumor.transcripts.gtf.gz 19848078 gtf 300c07f84214124ad28dd04f47e3c2cb tumor C3L-00796.RNA-Seq.R1.T b85c5a99-7f85-4c3b-bb05-186d0a4b4dbc C3L-00796.RNA-Seq.R2.T f624070c-7dde-4481-afb4-c2b17f00d0db C3L-00799 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-00799.tumor.transcripts.gtf.gz 20803929 gtf ca491dc4e053f517caf4f40d8a815f77 tumor C3L-00799.RNA-Seq.R1.T 6909bf98-cfab-4785-94df-39493636749c C3L-00799.RNA-Seq.R2.T 8640020d-5e63-47cb-a682-379ef0c43911 C3L-00800 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-00800.tumor.transcripts.gtf.gz 21311850 gtf ac4492081091afc082ed65e027222906 tumor C3L-00800.RNA-Seq.R1.T 85a4efc7-01aa-438e-b67c-9a1329b3ee90 C3L-00800.RNA-Seq.R2.T 571b76da-154b-46a3-9d5e-e65eec367ce8 +C3L-00807 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-00807.gtf.transcripts.gtf.gz 16850575 gtf bb1c44373c7a88946434f1a7d091e141 tumor_peripheral_blood C3L-00807.RNA-Seq.R1.Tpb 8a747393-0639-4d97-ac15-1707590bb135 C3L-00807.RNA-Seq.R2.Tpb c116d373-027e-4a79-a055-94b61358e8a3 +C3L-00810 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-00810.gtf.transcripts.gtf.gz 16427672 gtf cf8818d8043cdf06f9e1c1f5ef5a9ec3 tumor_peripheral_blood C3L-00810.RNA-Seq.R1.Tpb bfe8cb7e-970f-4949-ae57-48159f412d82 C3L-00810.RNA-Seq.R2.Tpb 59239c3a-eb53-418a-9c4d-45f19dfa72d6 C3L-00812 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-00812.tumor.transcripts.gtf.gz 19626986 gtf c16bbf00b77a61404fc7f3b8e3de652e tumor C3L-00812.RNA-Seq.R1.T abf42781-c4d0-4a52-b329-8de564805f8b C3L-00812.RNA-Seq.R2.T e3515d50-bb69-4fb5-89f7-441d3db64a27 C3L-00813 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-00813.tumor.transcripts.gtf.gz 22216273 gtf 1c1e667ff3618b983a3f3d9300688376 tumor C3L-00813.RNA-Seq.R1.T a117dea5-d8bb-459c-bc39-6f343d8d5b72 C3L-00813.RNA-Seq.R2.T 834c6145-bfcf-4387-9477-668190a210d3 C3L-00814 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-00814.tissue_normal.transcripts.gtf.gz 21247337 gtf 874fe690e803688c42a3581c0ff97a37 tissue_normal C3L-00814.RNA-Seq.R1.A 37f96ce9-71ea-4623-821b-3a70e23ca2ec C3L-00814.RNA-Seq.R2.A 9af9f0fe-0a10-4b2d-90fc-74d26a2c4766 @@ -349,6 +362,13 @@ C3L-01156 GBM RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/GBM/CPTAC3_GBM_ C3L-01157 GBM RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1_Y2.b3_20190807/C3L-01157_tumor.transcripts.gtf.gz 21052295 gtf 22575340aac8a8c924295f3e1a5074d6 tumor C3L-01157.RNA-Seq.R1.T 7e17f145-b0f4-4db5-8739-87119b0d9500 C3L-01157.RNA-Seq.R2.T f9a967f9-6406-40e3-8843-662f83c5f38d C3L-01158 PDA RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1_Y2.b3_20190807/C3L-01158_tumor.transcripts.gtf.gz 20867339 gtf e146e12f9bf22c7337cedb514cc63f2c tumor C3L-01158.RNA-Seq.R1.T ece270eb-efc7-440c-9a45-8c8000ba796c C3L-01158.RNA-Seq.R2.T cc148b01-aa6a-40cf-ac6c-75d6bbedd59b C3L-01160 PDA RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1_Y2.b3_20190807/C3L-01160_tumor.transcripts.gtf.gz 19493851 gtf f3dbfa3fed8331c8930f4f15d091685d tumor C3L-01160.RNA-Seq.R1.T f65ed51b-3ffb-4d6d-8b3b-4cc508e8e68b C3L-01160.RNA-Seq.R2.T 20a9db35-056d-43aa-b71d-dea448930ef0 +C3L-01182 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-01182.gtf.transcripts.gtf.gz 18455369 gtf b82a34f768dabaf12630a259da60b724 tumor_peripheral_blood C3L-01182.RNA-Seq.R1.Tpb 3364d291-2534-49ae-b9e4-536ea85d6c47 C3L-01182.RNA-Seq.R2.Tpb 22838a11-4def-4406-a04d-b9cfdfee17d2 +C3L-01187 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-01187.gtf.transcripts.gtf.gz 16826468 gtf deeeb18398e6d6a890eddf631d1a99c6 tumor_bone_marrow C3L-01187.RNA-Seq.R1.Tbm 36a6daf5-34a1-4963-b49d-99fedf970fb3 C3L-01187.RNA-Seq.R2.Tbm b0aace93-074d-4c07-9e93-9c9e28d62cd3 +C3L-01188 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-01188.gtf.transcripts.gtf.gz 17088084 gtf 34cb68982b231e5063de418d0d5972b7 tumor_bone_marrow C3L-01188.RNA-Seq.R1.Tbm 65a13af0-794a-4f67-954b-26d8b22325fe C3L-01188.RNA-Seq.R2.Tbm 716b4d9b-71cf-41ad-828b-d289d663f9bc +C3L-01201 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-01201.gtf.transcripts.gtf.gz 17101688 gtf 1011e1ba2226c750417bc86d7e8a2e53 tumor_bone_marrow C3L-01201.RNA-Seq.R1.Tbm 1ee6cfbe-280d-411c-bf00-f541cc3ff6db C3L-01201.RNA-Seq.R2.Tbm 02d60360-a6a6-409f-bf80-438b462b4daf +C3L-01202 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-01202.gtf.transcripts.gtf.gz 16878536 gtf 6638df33bfd4b831a7070dfbe9d29f43 tumor_bone_marrow C3L-01202.RNA-Seq.R1.Tbm 671428b2-fc87-432e-9bbc-d2690fea4ec0 C3L-01202.RNA-Seq.R2.Tbm ca4c00d1-c8a6-4326-8e11-c02894955b93 +C3L-01205 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-01205.gtf.transcripts.gtf.gz 17780955 gtf 5bd5752c41834a6252bbfed10f038b49 tumor_bone_marrow C3L-01205.RNA-Seq.R1.Tbm ea097e68-4b09-4511-b477-a23aba708ea8 C3L-01205.RNA-Seq.R2.Tbm 204844aa-3ac0-4c3d-9e14-df05ac393091 +C3L-01210 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-01210.gtf.transcripts.gtf.gz 17834638 gtf 8b6a2d9e6e68c8e9e564aec98b10cb91 tumor_bone_marrow C3L-01210.RNA-Seq.R1.Tbm ee4ac6f0-8979-4910-89d3-2ce3de279076 C3L-01210.RNA-Seq.R2.Tbm 23dd19d7-e29c-458d-b8fb-fc639375381d C3L-01232 GBM RNA-Seq_Transcript v1.2 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1_LUAD_GBM.Transcript_20210415/C3L-01232.tumor.transcripts.gtf.gz 20993348 gtf c9dee82f6c8424135028cdfab4f993f0 tumor C3L-01232.RNA-Seq.R1.T 1b412bf7-dfe6-46ce-8351-540dfc2698d5 C3L-01232.RNA-Seq.R2.T 64276f84-695c-4a6a-bde8-0b0378f17656 C3L-01237 HNSCC RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/HNSCC/CPTAC3_HNSCC_RNA-Seq_Transcript_v1_Y2.b3_20190807/C3L-01237_tissue_normal.transcripts.gtf.gz 20597520 gtf 25c33c3fc23000c0a8ce338132d147e2 tissue_normal C3L-01237.RNA-Seq.R1.A ba80215c-4900-4015-9279-3f316050e22e C3L-01237.RNA-Seq.R2.A ed2d3b8d-4c33-4ae2-8372-37435993da2c C3L-01237 HNSCC RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/HNSCC/CPTAC3_HNSCC_RNA-Seq_Transcript_v1_Y2.b3_20190807/C3L-01237_tumor.transcripts.gtf.gz 20263172 gtf a03892d1f6743ccd171c93f396cddf9e tumor C3L-01237.RNA-Seq.R1.T 752226f3-1c80-431f-b226-0255a510059c C3L-01237.RNA-Seq.R2.T a071a665-427a-42db-9a57-085a46c8ff32 @@ -382,6 +402,9 @@ C3L-01287 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC C3L-01287 CCRCC RNA-Seq_Transcript v1.3 20201217 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.3_RNA-Seq_Transcript.CCRCC_ITH_20201217/C3L-01287.HET_r6Y8p4.transcripts.gtf.gz 19610525 gtf 6828dacee89853c4c683bbdb345968b7 HET_r6Y8p4 C3L-01287.RNA-Seq.R1.T.HET_r6Y8p4 d65261b4-8bde-4d0e-8575-7eaf615c6e5d C3L-01287.RNA-Seq.R2.T.HET_r6Y8p4 054227df-d99a-4fe5-a411-061ccb226e8c C3L-01287 CCRCC RNA-Seq_Transcript v1.3 20201217 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.3_RNA-Seq_Transcript.CCRCC_ITH_20201217/C3L-01287.HET_r6YV3E.transcripts.gtf.gz 19260267 gtf 3ac765f46aa766b03f2fe663aabe4b21 HET_r6YV3E C3L-01287.RNA-Seq.R1.T.HET_r6YV3E 61a7995b-61cc-4d4c-a894-3cf34cf6428d C3L-01287.RNA-Seq.R2.T.HET_r6YV3E 0fae67c7-b141-487b-a4af-d45b25b6f81d C3L-01288 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-01288.tumor.transcripts.gtf.gz 23071167 gtf ca92ba55d21e61b7bf493acc55bd5f03 tumor C3L-01288.RNA-Seq.R1.T f10b5dcd-3ffd-4d4c-972b-20ba92377a81 C3L-01288.RNA-Seq.R2.T 2209dd0f-5712-41c4-be2f-0ba58ab9e5fa +C3L-01291 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-01291.gtf.transcripts.gtf.gz 17643440 gtf 4a702a7066c0cb77e16045a2f4e365d8 tumor_bone_marrow C3L-01291.RNA-Seq.R1.Tbm 8b726895-9862-4f65-a913-2df01d1a57e0 C3L-01291.RNA-Seq.R2.Tbm 64d7172a-a162-4a19-99a4-9eadddc740ed +C3L-01295 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-01295.gtf.transcripts.gtf.gz 16131620 gtf 51ba26e4b8a817898b32a03c06125a45 tumor_bone_marrow C3L-01295.RNA-Seq.R1.Tbm 316b0d56-7a4e-4eea-967f-5f9121bcc64e C3L-01295.RNA-Seq.R2.Tbm afdc6d9d-0099-4f29-8952-6be3a1bc0bbb +C3L-01296 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-01296.gtf.transcripts.gtf.gz 18735125 gtf 4ab85195cb5a54401c4a313af7fde848 tumor_bone_marrow C3L-01296.RNA-Seq.R1.Tbm 3dc35af9-cc1a-4e33-9653-245460e0ff17 C3L-01296.RNA-Seq.R2.Tbm bf7675cf-0611-47f4-a8b5-ac33d7823daf C3L-01302 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-01302.tissue_normal.transcripts.gtf.gz 22872753 gtf 3d33e5bf0d8b2cd70b8041a2c1759f67 tissue_normal C3L-01302.RNA-Seq.R1.A fdb44060-23a7-4e59-a702-a5283b8bee2d C3L-01302.RNA-Seq.R2.A b22a8f99-90ba-40b6-9a43-dad2607758d8 C3L-01302 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-01302.tumor.transcripts.gtf.gz 21646708 gtf 83b6fed68e93c13415c0a3ab7ffb4fe8 tumor C3L-01302.RNA-Seq.R1.T 1557a8aa-c6e9-4a10-8481-ef3e858bacc1 C3L-01302.RNA-Seq.R2.T 061c0b4a-2f52-49b7-8d34-fa4960c9bead C3L-01304 UCEC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-01304.tissue_normal.transcripts.gtf.gz 21070432 gtf 4a2de6662bc00e298cb533157db0aa34 tissue_normal C3L-01304.RNA-Seq.R1.A fb12c9f3-e9e4-4234-b1ea-b652ea9e064d C3L-01304.RNA-Seq.R2.A 9272b657-6b27-4628-adff-898271064f68 @@ -400,6 +423,9 @@ C3L-01330 LUAD RNA-Seq_Transcript v1.2 20210715 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_ C3L-01330 LUAD RNA-Seq_Transcript v1.2 20210715 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_RNA-Seq_Transcript_v1.2_LUAD_99_20210715/C3L-01330.tumor.transcripts.gtf.gz 20062444 gtf ed093b0907f3623d8bc8322245336738 tumor C3L-01330.RNA-Seq.R1.T d6b0d5a1-ca0a-40f6-8339-8652aab7a234 C3L-01330.RNA-Seq.R2.T 15dc97a0-f911-4f6d-ad2d-97be1e037095 C3L-01352 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-01352.tumor.transcripts.gtf.gz 21236120 gtf 0651ac17d1eff932466b6d1e5c8607ea tumor C3L-01352.RNA-Seq.R1.T 22ee7030-3274-461a-941b-04ab673308f8 C3L-01352.RNA-Seq.R2.T 8d9def8e-edcc-46fe-ad1a-246d5e8d6e82 C3L-01355 UCEC RNA-Seq_Transcript v1.0 20190529 Y2 /CPTAC3.Y2_WashU/UCEC/CPTAC3_UCEC_RNA-Seq_Transcript_Splicing_v1.0_Y2.b2_20190529/C3L-01355_tumor.transcripts.gtf.gz 22349438 gtf 0731e41606bbe5b22ef8da39729a47b4 tumor C3L-01355.RNA-Seq.R1.T 864ac672-b31c-41c7-a472-f6ca7977e107 C3L-01355.RNA-Seq.R2.T aa9b3c1e-498b-4e3e-8bb3-1242ba69dac3 +C3L-01425 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-01425.gtf.transcripts.gtf.gz 17884460 gtf b34d4024f37234c86d9c0b4b7ff90180 tumor_bone_marrow C3L-01425.RNA-Seq.R1.Tbm 4d5c2e00-b36f-4fa5-8b86-888dce250da2 C3L-01425.RNA-Seq.R2.Tbm e7d86046-cfb4-4b3b-b891-c28b1571226e +C3L-01426 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-01426.gtf.transcripts.gtf.gz 15924899 gtf 371528ca5baceddc439c26dd3fcaf1b2 tumor_peripheral_blood C3L-01426.RNA-Seq.R1.Tpb 8968ac3f-af34-49ac-bda9-abfc9b0e6373 C3L-01426.RNA-Seq.R2.Tpb fe29e9a1-2fc3-4f7d-a588-d6a803878000 +C3L-01427 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-01427.gtf.transcripts.gtf.gz 19694232 gtf 4517265b02a7e1c5f0348a3e499ac650 tumor_peripheral_blood C3L-01427.RNA-Seq.R1.Tpb 7874f5f7-1f87-491e-9daa-b1367b31131e C3L-01427.RNA-Seq.R2.Tpb 28292aa9-7a99-4b48-9e8a-dcc7410d30f9 C3L-01453 PDA RNA-Seq_Transcript v1.0 20190529 Y2 /CPTAC3.Y2_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_Splicing_v1.0_Y2.b2_20190529/C3L-01453_tissue_normal.transcripts.gtf.gz 20810390 gtf e11aca12af9e730aeac64bdbe0c34103 tissue_normal C3L-01453.RNA-Seq.R1.A f6205c77-f737-451c-875e-f652c4e5512d C3L-01453.RNA-Seq.R2.A 3c23d217-08a0-4c70-87d6-a8f654143a21 C3L-01453 PDA RNA-Seq_Transcript v1.0 20190529 Y2 /CPTAC3.Y2_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_Splicing_v1.0_Y2.b2_20190529/C3L-01453_tumor.transcripts.gtf.gz 20018498 gtf 398b388b1acc850f68625991cb1468e6 tumor C3L-01453.RNA-Seq.R1.T c281e89f-9c99-416f-acec-621a455321c1 C3L-01453.RNA-Seq.R2.T 489b6a66-d9ad-4f86-8571-00e2aa811643 C3L-01455 LSCC RNA-Seq_Transcript v1 20190426 Y2 /CPTAC3.Y2_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1_Y2.b1_20190426/C3L-01455_tissue_normal.transcripts.gtf.gz 20818776 gtf 74b44072b267ca8953e2f325c91c593a tissue_normal C3L-01455.RNA-Seq.R1.A ee74ec6a-6226-4430-bf1b-f96aa946931d C3L-01455.RNA-Seq.R2.A fad524b8-265f-4b7b-bcc9-d2cddba083c6 @@ -462,6 +488,9 @@ C3L-01683 LUAD RNA-Seq_Transcript v1.2 20210715 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_ C3L-01687 PDA RNA-Seq_Transcript v1.0 20190529 Y2 /CPTAC3.Y2_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_Splicing_v1.0_Y2.b2_20190529/C3L-01687_tumor.transcripts.gtf.gz 20576194 gtf 785d24d9054eee7b04050d8a7096e1de tumor C3L-01687.RNA-Seq.R1.T 9545cf4f-5b01-43a6-b003-ef20185af5e4 C3L-01687.RNA-Seq.R2.T bad2a3a3-78be-44a8-906a-1572ebf2422c C3L-01689 PDA RNA-Seq_Transcript v1.0 20190529 Y2 /CPTAC3.Y2_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_Splicing_v1.0_Y2.b2_20190529/C3L-01689_tissue_normal.transcripts.gtf.gz 21823648 gtf f8dfb8bb62f50bda0ea4512d1a372c0c tissue_normal C3L-01689.RNA-Seq.R1.A 2e215877-8133-4956-9365-afcc86b208e6 C3L-01689.RNA-Seq.R2.A dcb43335-d796-4abf-b95e-0519563eba77 C3L-01689 PDA RNA-Seq_Transcript v1.0 20190529 Y2 /CPTAC3.Y2_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_Splicing_v1.0_Y2.b2_20190529/C3L-01689_tumor.transcripts.gtf.gz 19803190 gtf 49245b59185549e9094572b58dded94d tumor C3L-01689.RNA-Seq.R1.T c6fa2be8-70e6-4a3b-82a4-911ee2a935c7 C3L-01689.RNA-Seq.R2.T 314c5ece-ac0c-43cb-9cb9-5074c5ddd17f +C3L-01694 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-01694.gtf.transcripts.gtf.gz 17759969 gtf 37faaaec2103a6080547187376e128fb tumor_peripheral_blood C3L-01694.RNA-Seq.R1.Tpb c23e84a2-04e9-43f2-985b-066d931b4eb6 C3L-01694.RNA-Seq.R2.Tpb 9495c32c-577f-4f2d-b673-9a76a4830300 +C3L-01696 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-01696.gtf.transcripts.gtf.gz 17208790 gtf e58f6b66f4b4cac48ce8052a04f3cc90 tumor_bone_marrow C3L-01696.RNA-Seq.R1.Tbm 96152e05-9a90-41d0-8aad-96fcd8a9abad C3L-01696.RNA-Seq.R2.Tbm 52f743ca-17e2-4e87-8e66-69f9224c4139 +C3L-01700 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-01700.gtf.transcripts.gtf.gz 15994865 gtf 8c3d641492419c2d6d322b28fa3991bc tumor_bone_marrow C3L-01700.RNA-Seq.R1.Tbm f456c6d9-3147-4e10-ad0a-c4125bc6a38b C3L-01700.RNA-Seq.R2.Tbm 80547ec7-4f9f-45e6-baa4-36be1dbd9965 C3L-01702 PDA RNA-Seq_Transcript v1.0 20190529 Y2 /CPTAC3.Y2_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_Splicing_v1.0_Y2.b2_20190529/C3L-01702_tumor.transcripts.gtf.gz 20637099 gtf db8c348cd1363f5b0bfe77ac045e7716 tumor C3L-01702.RNA-Seq.R1.T a8bbcd02-1dbd-4841-9abf-147a007025ab C3L-01702.RNA-Seq.R2.T 2a6ed8fb-e80c-497b-aa15-fff187d6e3a7 C3L-01703 PDA RNA-Seq_Transcript v1.0 20190529 Y2 /CPTAC3.Y2_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_Splicing_v1.0_Y2.b2_20190529/C3L-01703_tissue_normal.transcripts.gtf.gz 20702338 gtf 40cfe1c036c4c8166e0eb963fce0b6f8 tissue_normal C3L-01703.RNA-Seq.R1.A be348100-73f3-4d89-99f1-2776e58503ef C3L-01703.RNA-Seq.R2.A b7dd80aa-f652-4fad-a6de-425cebcd7616 C3L-01703 PDA RNA-Seq_Transcript v1.0 20190529 Y2 /CPTAC3.Y2_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_Splicing_v1.0_Y2.b2_20190529/C3L-01703_tumor.transcripts.gtf.gz 20364049 gtf 7b190fba285f7f546dd87f1eda072962 tumor C3L-01703.RNA-Seq.R1.T 007cdbeb-bf0e-4fd4-9474-6946c1b1c757 C3L-01703.RNA-Seq.R2.T bc7fc91d-9d25-466f-9b13-3d875f3c0592 @@ -540,6 +569,10 @@ C3L-02129 LUAD RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/LUAD/CPTAC3_LU C3L-02129 LUAD RNA-Seq_Transcript v1.4 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_RNA-Seq_Transcript_v1_LUAD_GBM.Transcript_20210415/C3L-02129.tumor.transcripts.gtf.gz 20840858 gtf 16c482ee384cb00f3ab3e3925a4e0597 tumor C3L-02129.RNA-Seq.R1.T 510fed09-e6bd-4552-9aed-5cdbdd7f3455 C3L-02129.RNA-Seq.R2.T 08cd008c-0097-41a8-98a9-bcf66204ce25 C3L-02130 LSCC RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1_Y2.b3_20190807/C3L-02130_tissue_normal.transcripts.gtf.gz 20921579 gtf 69c92610579bf3102a7929aea0db1659 tissue_normal C3L-02130.RNA-Seq.R1.A cc1e3364-5b6f-4dc8-be97-3496bf3ba60d C3L-02130.RNA-Seq.R2.A 34c7bf3f-2c72-4179-92da-1226ffc50028 C3L-02130 LSCC RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1_Y2.b3_20190807/C3L-02130_tumor.transcripts.gtf.gz 20773140 gtf 64f4d591385f6aaef8ad8273a0f1deec tumor C3L-02130.RNA-Seq.R1.T 67d963d6-5c15-4837-bfb3-a05ae934c587 C3L-02130.RNA-Seq.R2.T 8633e580-d501-4c45-9e20-46a6251a4934 +C3L-02132 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-02132.gtf.transcripts.gtf.gz 16865037 gtf 60ab4612acb392ba387e8ae1804a725b tumor_bone_marrow C3L-02132.RNA-Seq.R1.Tbm 5ced447e-e845-49a9-b617-bd26a1eae460 C3L-02132.RNA-Seq.R2.Tbm db5d73c2-53c6-4ba8-9fa4-255cd1a208fd +C3L-02135 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-02135.gtf.transcripts.gtf.gz 17791180 gtf eb206bbd96a1b4f1611fa5f8795c5f45 tumor_bone_marrow C3L-02135.RNA-Seq.R1.Tbm fec039da-21f5-4b68-8a65-3859f6aca7ca C3L-02135.RNA-Seq.R2.Tbm abe55041-2ae7-40eb-8ccc-6c5a2cae51fb +C3L-02136 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-02136.gtf.transcripts.gtf.gz 17397557 gtf 0cf786f3afffa0d35105c06720a6a5f2 tumor_bone_marrow C3L-02136.RNA-Seq.R1.Tbm 93909162-a668-410b-8941-d515c441dd77 C3L-02136.RNA-Seq.R2.Tbm b1063253-4dc8-4b9f-8a58-cc0a86a8be4c +C3L-02137 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-02137.gtf.transcripts.gtf.gz 17274223 gtf eebce99629d90077f4969c2b7cdff0ce tumor_bone_marrow C3L-02137.RNA-Seq.R1.Tbm ff7ac451-2cf4-4e4a-b9ea-e931703cc80c C3L-02137.RNA-Seq.R2.Tbm c21ae1be-157e-4641-8e90-886929f1a59d C3L-02163 LSCC RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1_Y2.b3_20190807/C3L-02163_tissue_normal.transcripts.gtf.gz 22447246 gtf f9e79e8a8f7845c1b094e615fce233d6 tissue_normal C3L-02163.RNA-Seq.R1.A 9749e6bc-0bb0-40c9-aec9-faa83eeac92e C3L-02163.RNA-Seq.R2.A 98e55f73-432c-421b-b9b6-10ed1c73806e C3L-02163 LSCC RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1_Y2.b3_20190807/C3L-02163_tumor.transcripts.gtf.gz 22590031 gtf 81b249e07cc656e4e08e1c95217c848f tumor C3L-02163.RNA-Seq.R1.T 3978c40c-51ea-4f84-94e7-a6d7f60e9a95 C3L-02163.RNA-Seq.R2.T 3a1d8ee4-8c8c-410d-8e7a-326284afefb7 C3L-02164 LSCC RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1_Y2.b3_20190807/C3L-02164_tissue_normal.transcripts.gtf.gz 20581081 gtf 4e207712768c3c00e7455624f6460e9a tissue_normal C3L-02164.RNA-Seq.R1.A 5a20c427-b058-4d28-9b84-51370059f471 C3L-02164.RNA-Seq.R2.A 0cc189c1-37d3-48bd-8efc-e679aecfcc1e @@ -724,6 +757,7 @@ C3L-02741 UCEC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_ C3L-02744 UCEC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-02744.tumor.transcripts.gtf.gz 19118822 gtf 120e6ec833fd5bb3b1844bc2691e0d0e tumor C3L-02744.RNA-Seq.R1.T 31af8f62-4e41-44be-be45-2fad56f86ba9 C3L-02744.RNA-Seq.R2.T 1adfd980-889e-4035-b2ef-c072f11c5127 C3L-02746 UCEC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-02746.tumor.transcripts.gtf.gz 20590949 gtf ac051249026ae2054e7299a0fff59ab1 tumor C3L-02746.RNA-Seq.R1.T 1a05a9f1-2da4-4d3a-b21c-2a1d06004c87 C3L-02746.RNA-Seq.R2.T 548e3dc3-22cf-4cf2-86d9-f0d14680ca4a C3L-02747 UCEC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-02747.tumor.transcripts.gtf.gz 19492422 gtf 76d01747f32e5b58876e96095e5cab02 tumor C3L-02747.RNA-Seq.R1.T 3cb651e1-c2a2-4f7d-bcbc-348c255b49ed C3L-02747.RNA-Seq.R2.T 134b54a4-abe8-48db-ac37-8c8d30ace986 +C3L-02779 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-02779.gtf.transcripts.gtf.gz 18168549 gtf 6cdd6733ad80f5916f5e7d727e29de99 tumor_peripheral_blood C3L-02779.RNA-Seq.R1.Tpb 9d599c99-8756-426d-a6df-9620e51431fa C3L-02779.RNA-Seq.R2.Tpb 0a70c3b2-77d6-409d-82cf-1f729b1c3f15 C3L-02800 UCEC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-02800.tumor.transcripts.gtf.gz 20377955 gtf dc4c82c0b1af5c03fe782ca17dd08d5b tumor C3L-02800.RNA-Seq.R1.T 74796345-0996-44be-aa00-56c8b0a1a1ac C3L-02800.RNA-Seq.R2.T 923374c5-05a8-454f-ab87-2f06fb05351b C3L-02802 UCEC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-02802.tumor.transcripts.gtf.gz 19665735 gtf ca13935d069ff87e57ecc356b04b1cde tumor C3L-02802.RNA-Seq.R1.T 2e2de8aa-2ee9-4900-bb8f-a617e3a161dc C3L-02802.RNA-Seq.R2.T ecf64c63-45b2-4d74-a4c6-04042fa0c697 C3L-02809 PDA RNA-Seq_Transcript v1.2 20200525 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1.2_PDA.20200516_20200525/C3L-02809.tissue_normal.transcripts.gtf.gz 19408535 gtf 5593884c0bbba03782f19fa85aa77dba tissue_normal C3L-02809.RNA-Seq.R1.A 704a56a4-7f6e-4930-bddf-44ba1e59e6fd C3L-02809.RNA-Seq.R2.A 2d6bffbd-1904-4b5f-89bd-2f151d719cb3 @@ -798,6 +832,8 @@ C3L-03271 LUAD RNA-Seq_Transcript v1.4 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_ C3L-03271 LUAD RNA-Seq_Transcript v1.4 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_RNA-Seq_Transcript_v1_LUAD_GBM.Transcript_20210415/C3L-03271.tumor.transcripts.gtf.gz 18854879 gtf ae29c49d5322c2a36ae9b735bb2dae7e tumor C3L-03271.RNA-Seq.R1.T a27e5b8d-8802-4454-b093-45e318d4f588 C3L-03271.RNA-Seq.R2.T 2d8514dd-2d1b-415c-8714-c0dc66a7d707 C3L-03272 LSCC RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1_Y2.b3_20190807/C3L-03272_tissue_normal.transcripts.gtf.gz 19535159 gtf d6645f1452bf448824f990e8b86adea3 tissue_normal C3L-03272.RNA-Seq.R1.A 4c8a1673-4bc1-4b47-9166-27890c2664ea C3L-03272.RNA-Seq.R2.A 47bf26e4-b41b-40a3-b114-29cdb58d698b C3L-03272 LSCC RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1_Y2.b3_20190807/C3L-03272_tumor.transcripts.gtf.gz 20522569 gtf 9acb96700a1ce286fcb80845f2b1302a tumor C3L-03272.RNA-Seq.R1.T ade6ad8e-5427-41bf-b2b3-338c7b40c786 C3L-03272.RNA-Seq.R2.T 3f88a9da-1dcb-47f7-9081-5247432544a8 +C3L-03303 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-03303.gtf.transcripts.gtf.gz 17674527 gtf 539c9335736310dadf453729ed3b5dd8 tumor_peripheral_blood C3L-03303.RNA-Seq.R1.Tpb 50e07cc2-4c18-4b66-ad49-40c0ddb33156 C3L-03303.RNA-Seq.R2.Tpb 676f819f-ab8a-4d67-b924-4ea85853f451 +C3L-03308 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-03308.gtf.transcripts.gtf.gz 17434157 gtf 4f950fac7f7406350b8341031faf7511 tumor_bone_marrow C3L-03308.RNA-Seq.R1.Tbm 0e16aef5-04b8-4503-a905-e437485f08fa C3L-03308.RNA-Seq.R2.Tbm 67adf4d2-b1a4-45a3-b423-04aeeff6e2b4 C3L-03348 PDA RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1.4_batch_1021_20211028/C3L-03348.tumor.transcripts.gtf.gz 22119579 gtf 5205576eab104104332601f01b6963e3 tumor C3L-03348.RNA-Seq.R1.T.BIOTEXT_XDxB65v cb4f0584-8ef0-4ed0-b10c-9b7e00aab287 C3L-03348.RNA-Seq.R2.T.BIOTEXT_XDxB65v 39cef4d2-3d3c-4e64-b7c0-2ee3c22a2606 C3L-03350 PDA RNA-Seq_Transcript v1.2 20200525 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1.2_PDA.20200516_20200525/C3L-03350.tumor.transcripts.gtf.gz 18987117 gtf bb726a6f23a4f96b4c3a4da832fb4cf0 tumor C3L-03350.RNA-Seq.R1.T 3a223270-44f3-44c0-aef3-1cd3b7d84f4a C3L-03350.RNA-Seq.R2.T e6e786ba-07df-4f1d-afe3-a24537a37c89 C3L-03356 PDA RNA-Seq_Transcript v1.2 20200525 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1.2_PDA.20200516_20200525/C3L-03356.tumor.transcripts.gtf.gz 20204744 gtf 086a1c9799c3eba5dcf2ae1a0259ed18 tumor C3L-03356.RNA-Seq.R1.T 61fa646e-a7db-4be2-ab3b-b05b21b48ff5 C3L-03356.RNA-Seq.R2.T 17eeac41-1327-4e26-92fb-5cb9cdb96767 @@ -821,6 +857,13 @@ C3L-03462 LUAD RNA-Seq_Transcript v1.4 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_ C3L-03463 LUAD RNA-Seq_Transcript v1.4 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_RNA-Seq_Transcript_v1_LUAD_GBM.Transcript_20210415/C3L-03463.tissue_normal.transcripts.gtf.gz 18767359 gtf 948d383e1d746e1d3987f99b8fd6db46 tissue_normal C3L-03463.RNA-Seq.R1.A 3a1d08ac-7208-4ae2-a1bb-204516c40043 C3L-03463.RNA-Seq.R2.A a08b3171-0932-4601-b7d0-cbab3d9c8b41 C3L-03463 LUAD RNA-Seq_Transcript v1.4 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_RNA-Seq_Transcript_v1_LUAD_GBM.Transcript_20210415/C3L-03463.tumor.transcripts.gtf.gz 19041915 gtf d2daa1297a10009e5e6e988d9f2c73e4 tumor C3L-03463.RNA-Seq.R1.T 8af7daf9-d63a-4c4d-b9f9-b298da23bcd5 C3L-03463.RNA-Seq.R2.T dadcbb2c-584f-4847-92a0-2bfa844266f2 C3L-03467 UCEC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-03467.tumor.transcripts.gtf.gz 20441549 gtf db8b18c997cba160ade056982b3aca36 tumor C3L-03467.RNA-Seq.R1.T 400fefc2-8e91-4953-b8e0-d1bdcf30252b C3L-03467.RNA-Seq.R2.T 30c268b4-b8d7-463a-8ec2-4f70a9d6eca4 +C3L-03491 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-03491.gtf.transcripts.gtf.gz 17557898 gtf 8399f9f3d78ae47a82418da733aa4a1d tumor_bone_marrow C3L-03491.RNA-Seq.R1.Tbm b4ab375f-c8ff-4016-8999-bc1864a9cb8f C3L-03491.RNA-Seq.R2.Tbm f8b0ee43-6b6c-44ed-af83-ad31191765a6 +C3L-03493 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-03493.gtf.transcripts.gtf.gz 15312671 gtf 5c796915e8f0f0cdf1d3d6143ebdbfa3 tumor_bone_marrow C3L-03493.RNA-Seq.R1.Tbm 4f44b8ed-24b0-4cd8-88d8-932b4d084bb7 C3L-03493.RNA-Seq.R2.Tbm fdaee277-9884-48eb-94e4-08462dcac691 +C3L-03496 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-03496.gtf.transcripts.gtf.gz 16661448 gtf d32e3c0c2483c07404bc0378b3508a77 tumor_bone_marrow C3L-03496.RNA-Seq.R1.Tbm 1d6edd93-fa5c-4279-9c3e-4581c8ac3b98 C3L-03496.RNA-Seq.R2.Tbm 8f3698ca-efbf-4bda-aa48-9f4a69f13208 +C3L-03497 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-03497.gtf.transcripts.gtf.gz 17131406 gtf 5a6922899e6b1a70cb570a93488208ce tumor_bone_marrow C3L-03497.RNA-Seq.R1.Tbm be502fb7-05dd-4427-836c-f87cbd41f18b C3L-03497.RNA-Seq.R2.Tbm d452cd4c-f793-4b18-a675-b58f92cc384a +C3L-03506 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-03506.gtf.transcripts.gtf.gz 16678433 gtf 0f119ad40e886b6877cd402a4e865d25 tumor_bone_marrow C3L-03506.RNA-Seq.R1.Tbm 437768d4-042d-4ce3-976b-4661251774f4 C3L-03506.RNA-Seq.R2.Tbm cfb053a9-a6a0-4a3f-8753-0a09b0a66327 +C3L-03508 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-03508.gtf.transcripts.gtf.gz 17054544 gtf d749d7d6b202e5166c68c93ce2580bf3 tumor_bone_marrow C3L-03508.RNA-Seq.R1.Tbm eff2fed0-50f2-463a-af08-4f7e2c407cd1 C3L-03508.RNA-Seq.R2.Tbm 9f0b5557-93f6-493d-a913-876087e28fcc +C3L-03510 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-03510.gtf.transcripts.gtf.gz 19453400 gtf bd4b1b7d17c631cb449b5a1aefba5d12 tumor_bone_marrow C3L-03510.RNA-Seq.R1.Tbm 0d1b1ada-a377-4967-bf87-6f932737d579 C3L-03510.RNA-Seq.R2.Tbm 7b51fead-61ec-46e0-a257-af0103cbda61 C3L-03513 PDA RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1.4_batch_1021_20211028/C3L-03513.tissue_normal.transcripts.gtf.gz 20986659 gtf ee3cfd2b8ff150baf24550f1be6ead52 tissue_normal C3L-03513.RNA-Seq.R1.A 30c65fa6-6f8c-41cc-ae25-6089adc93750 C3L-03513.RNA-Seq.R2.A 4f9e894b-8949-486f-ae58-ee15c1d111bf C3L-03589 UCEC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3L-03589.tumor.transcripts.gtf.gz 17695815 gtf 50f8107d65305686966f0fb4cb4e9936 tumor C3L-03589.RNA-Seq.R1.T e77f5f6a-e76c-48b6-90d8-51ce0c4b32ad C3L-03589.RNA-Seq.R2.T a1215d7e-9536-4a14-8474-6a67c0014834 C3L-03622 PDA RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1.4_batch_1021_20211028/C3L-03622.tumor.transcripts.gtf.gz 19653721 gtf e8c936e8cd974262d98d8b803d564a3c tumor C3L-03622.RNA-Seq.R1.T.BIOTEXT_PNY28W4 7edc8bc7-80fc-466d-bae6-ea92952dc276 C3L-03622.RNA-Seq.R2.T.BIOTEXT_PNY28W4 71eca917-c9e4-4e30-b6c6-87ab271d4005 @@ -907,6 +950,17 @@ C3L-04085 GBM RNA-Seq_Transcript v1.2 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GB C3L-04090 GBM RNA-Seq_Transcript v1.2 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1_LUAD_GBM.Transcript_20210415/C3L-04090.tumor.transcripts.gtf.gz 22881743 gtf cfc7fa2bc5a3f93297f22881c5890924 tumor C3L-04090.RNA-Seq.R1.T 9a8aec46-4acd-4c73-96c3-ab521a638114 C3L-04090.RNA-Seq.R2.T c3e5d01b-6efa-4a68-9f27-d3d6955b01e5 C3L-04213 GBM RNA-Seq_Transcript v1.2 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1_LUAD_GBM.Transcript_20210415/C3L-04213.tumor.transcripts.gtf.gz 17503807 gtf 3896ed110dc87bc7c1b692811045eb93 tumor C3L-04213.RNA-Seq.R1.T 3a18317d-3520-42dc-8003-f9561853b8dc C3L-04213.RNA-Seq.R2.T fb64ce39-84ad-40df-801d-f1e1146356a0 C3L-04216 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-04216.tumor.transcripts.gtf.gz 20461873 gtf 854faffcd11953c9e8134d6ce51c6abb tumor C3L-04216.RNA-Seq.R1.T 2b801f00-6d57-4304-b6f0-b622e817a416 C3L-04216.RNA-Seq.R2.T 56e142e2-4864-49a1-ad2e-475bf798ac98 +C3L-04231 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04231.gtf.transcripts.gtf.gz 16963522 gtf 9caf982f23e7e716b9670d6bd1afc4bb tumor_bone_marrow C3L-04231.RNA-Seq.R1.Tbm 0ce5469b-6555-41ad-b583-abacf090c5ff C3L-04231.RNA-Seq.R2.Tbm 14695f91-0a51-4d0d-883e-5c1fe933df93 +C3L-04236 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04236.gtf.transcripts.gtf.gz 18235342 gtf c9ddacc820e885623351c6a3417b58c7 tumor_bone_marrow C3L-04236.RNA-Seq.R1.Tbm 53b6301b-9fe3-4e09-aa52-ad01479e1d61 C3L-04236.RNA-Seq.R2.Tbm d085633a-e3b6-4387-a6ea-6da417fb8c1e +C3L-04241 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04241.gtf.transcripts.gtf.gz 16843555 gtf f50e89903a6f17bc0344fa46aa31cf6d tumor_bone_marrow C3L-04241.RNA-Seq.R1.Tbm ad42ec5f-8d8a-4ead-81dd-6c3b8c515d6a C3L-04241.RNA-Seq.R2.Tbm c1340255-b0c0-47e4-b1ce-8886bff88015 +C3L-04242 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04242.gtf.transcripts.gtf.gz 16411739 gtf ac1fcb612e83ca08b933abba187fe458 tumor_bone_marrow C3L-04242.RNA-Seq.R1.Tbm 63878f36-065b-45cc-91ea-b02efdc596e7 C3L-04242.RNA-Seq.R2.Tbm a20b9a94-48ff-4cfc-bb4e-d6fa58bd57bf +C3L-04244 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04244.gtf.transcripts.gtf.gz 16897100 gtf 3d9add73c2a59d6a866fe6b589b09d85 tumor_bone_marrow C3L-04244.RNA-Seq.R1.Tbm 150db7f3-283f-45ee-935c-7bf039676f83 C3L-04244.RNA-Seq.R2.Tbm dec8586b-52ac-42b0-89e7-80a0aeec0932 +C3L-04245 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04245.gtf.transcripts.gtf.gz 17225377 gtf 5f03ebd986a42d2a0dab937279e3f44b tumor_bone_marrow C3L-04245.RNA-Seq.R1.Tbm 6fb816c2-0f0c-4635-9d44-cb40175986d6 C3L-04245.RNA-Seq.R2.Tbm aa6df772-e18a-47b2-b488-7a5c2b0b6cbf +C3L-04250 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04250.gtf.transcripts.gtf.gz 17402954 gtf f443ae11d9ec9c7a7c3c9f261dda094c tumor_bone_marrow C3L-04250.RNA-Seq.R1.Tbm ddaa1a34-5387-44c9-9039-aaa071dc213d C3L-04250.RNA-Seq.R2.Tbm b0efb625-e897-4171-9c3d-19fbcc95e68d +C3L-04263 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04263.gtf.transcripts.gtf.gz 17400880 gtf e0d77aa56da672412a45ac694afa9726 tumor_bone_marrow C3L-04263.RNA-Seq.R1.Tbm 50d95169-c9e1-4ace-b490-77bb93633130 C3L-04263.RNA-Seq.R2.Tbm e5dbbe15-28a7-4d3b-968c-08bc5b42d514 +C3L-04265 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04265.gtf.transcripts.gtf.gz 18189910 gtf 772c546c9ec5cba1e4bcf3b27ca76ee9 tumor_bone_marrow C3L-04265.RNA-Seq.R1.Tbm 53af00b1-31cd-4f05-9545-fd6eefaee541 C3L-04265.RNA-Seq.R2.Tbm ab360685-deb0-47d2-8ae9-858cd090f7f3 +C3L-04269 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04269.gtf.transcripts.gtf.gz 17794074 gtf eb5ec43fa73c2507deaaa4f12a757cba tumor_peripheral_blood C3L-04269.RNA-Seq.R1.Tpb d548139e-dcbb-4064-a6e5-47466195bc6b C3L-04269.RNA-Seq.R2.Tpb 9405337a-8f55-4d24-8926-d7fcb09c492b +C3L-04270 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04270.gtf.transcripts.gtf.gz 18062825 gtf 6d1fdcf56283b60493d9eae29c6edf48 tumor_bone_marrow C3L-04270.RNA-Seq.R1.Tbm 8a3129ee-c1c8-4a42-a263-74e98cb4a75b C3L-04270.RNA-Seq.R2.Tbm 3475f320-39a9-4913-a496-0bf21360a545 C3L-04336 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-04336.tissue_normal.transcripts.gtf.gz 21537242 gtf cf10f747eda55a769e1366d161b00e35 tissue_normal C3L-04336.RNA-Seq.R1.A 1d5e8d44-c758-4c01-856f-923ce90088d9 C3L-04336.RNA-Seq.R2.A bde959a3-48f7-439a-b1ea-2b56936ee3d2 C3L-04336 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-04336.tumor.transcripts.gtf.gz 22446115 gtf 85e8293c27165fa0169619797a5349fb tumor C3L-04336.RNA-Seq.R1.T 1956c0ac-22a8-4eaf-b902-60f761cffb68 C3L-04336.RNA-Seq.R2.T a9ca1e0c-0d79-4d8a-bc85-fc1efec794d2 C3L-04339 GBM RNA-Seq_Transcript v1.2 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1_LUAD_GBM.Transcript_20210415/C3L-04339.tumor.transcripts.gtf.gz 16986851 gtf 55f01a90e84e6e389ffaf58401a81812 tumor C3L-04339.RNA-Seq.R1.T c6a9244a-4ab2-4f78-be63-b74401e4b903 C3L-04339.RNA-Seq.R2.T 1ad6b56f-857b-4e87-ba96-77141a60b898 @@ -938,7 +992,12 @@ C3L-04473 PDA RNA-Seq_Transcript v1.2 20200525 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PD C3L-04475 PDA RNA-Seq_Transcript v1.2 20200525 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1.2_PDA.20200516_20200525/C3L-04475.tissue_normal.transcripts.gtf.gz 18660834 gtf 9575f3b3813f52cd51665f4d91787c23 tissue_normal C3L-04475.RNA-Seq.R1.A a8a064eb-7b13-4787-a851-54149dc5efc1 C3L-04475.RNA-Seq.R2.A 33d050c4-19aa-41c1-b3bf-4621fb774485 C3L-04475 PDA RNA-Seq_Transcript v1.2 20200525 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1.2_PDA.20200516_20200525/C3L-04475.tumor.transcripts.gtf.gz 18924252 gtf 5e741a363893da6618be7cf9db09491d tumor C3L-04475.RNA-Seq.R1.T 30d19a9a-ea38-4aef-bb05-c5b0f3a039ac C3L-04475.RNA-Seq.R2.T a2efd595-9842-4520-b7af-c47a68b62967 C3L-04479 PDA RNA-Seq_Transcript v1.2 20200525 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1.2_PDA.20200516_20200525/C3L-04479.tumor.transcripts.gtf.gz 19172774 gtf 0fccabd0e7f4bc51c4d486e4ac8fe62f tumor C3L-04479.RNA-Seq.R1.T 0a0446f6-2bd9-4e7a-b205-4489e718fd1f C3L-04479.RNA-Seq.R2.T ea7cae74-cb6b-4d52-a75f-82d1935e4ed3 +C3L-04483 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04483.gtf.transcripts.gtf.gz 17112384 gtf eee2c98b7427e6987a96464c9eed4838 tumor_bone_marrow C3L-04483.RNA-Seq.R1.Tbm 1ece23d9-50e4-4840-9368-54b95b44af41 C3L-04483.RNA-Seq.R2.Tbm 553777bf-1ca0-42a7-a5b0-af7bf80dafd7 +C3L-04486 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04486.gtf.transcripts.gtf.gz 17190512 gtf a1a760574a2c4046f26b2f1b38cb8b9f tumor_bone_marrow C3L-04486.RNA-Seq.R1.Tbm 97364e63-a98f-41b4-bcc8-a4a2ba459ea3 C3L-04486.RNA-Seq.R2.Tbm 270717a8-e9f6-4fae-936c-2abbf8d55a93 +C3L-04489 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04489.gtf.transcripts.gtf.gz 19459965 gtf 7d0199a2d227999c609e62818ed3f3a8 tumor_peripheral_blood C3L-04489.RNA-Seq.R1.Tpb 893bc095-7b43-4637-8907-176b83942bd4 C3L-04489.RNA-Seq.R2.Tpb 4fbdbc23-e6f9-4b8c-8276-a7ece7600a77 C3L-04495 PDA RNA-Seq_Transcript v1.2 20200525 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1.2_PDA.20200516_20200525/C3L-04495.tumor.transcripts.gtf.gz 19010968 gtf 18bdcf75ad9009026d830668f3a6073c tumor C3L-04495.RNA-Seq.R1.T 165bff0a-b883-4098-b18f-ff82d102e506 C3L-04495.RNA-Seq.R2.T 5d7103c9-28f9-4015-8faa-16fc46808618 +C3L-04505 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04505.gtf.transcripts.gtf.gz 18174287 gtf cd95ea44c8df92622903a49f7aa85026 tumor_bone_marrow C3L-04505.RNA-Seq.R1.Tbm ba291ac6-8d33-47bf-abd9-bec94a701732 C3L-04505.RNA-Seq.R2.Tbm 5557fd11-809c-49a6-b118-7e7ca5e54935 +C3L-04508 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04508.gtf.transcripts.gtf.gz 18251935 gtf 0cf17428a281a97bfac0cea263e4254d tumor_bone_marrow C3L-04508.RNA-Seq.R1.Tbm 030e9e72-38d2-4d03-a9bd-fe44189eb0c1 C3L-04508.RNA-Seq.R2.Tbm 9e9e843f-3b4f-4fd4-9f51-6bc02b3d1a91 C3L-04537 GBM RNA-Seq_Transcript v1.2 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1_LUAD_GBM.Transcript_20210415/C3L-04537.tumor.transcripts.gtf.gz 20166529 gtf 5cfb0ccb9dc6bf1952d3c83c0c4d2a96 tumor C3L-04537.RNA-Seq.R1.T adf59d70-7072-4025-8eba-01d2dcd6e667 C3L-04537.RNA-Seq.R2.T cd035eaf-a77f-4b9b-af7d-f4c0af78fac7 C3L-04539 GBM RNA-Seq_Transcript v1.2 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1_LUAD_GBM.Transcript_20210415/C3L-04539.tumor.transcripts.gtf.gz 19780447 gtf 5d00d0084a24c79f4b35d405f64c2099 tumor C3L-04539.RNA-Seq.R1.T 9b56e66a-4850-46ec-b519-5379c91aa066 C3L-04539.RNA-Seq.R2.T 5a856d4a-bb70-45dc-af41-53ec656ffc10 C3L-04728 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-04728.tumor.transcripts.gtf.gz 22502842 gtf f1856c0e14473d6551377263fc785f5d tumor C3L-04728.RNA-Seq.R1.T 53da8d54-81eb-4038-88b2-3196cb814a69 C3L-04728.RNA-Seq.R2.T 872ca10d-39ab-43d2-a514-281d77055d1e @@ -951,6 +1010,11 @@ C3L-04757 LUAD RNA-Seq_Transcript v1.4 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_ C3L-04757 LUAD RNA-Seq_Transcript v1.4 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_RNA-Seq_Transcript_v1_LUAD_GBM.Transcript_20210415/C3L-04757.tumor.transcripts.gtf.gz 19585783 gtf 50cfd236fc789ac21fb54386cad6b0c1 tumor C3L-04757.RNA-Seq.R1.T d6c9218c-2163-4bda-adec-e85ebb276e8b C3L-04757.RNA-Seq.R2.T e87b26c8-71d5-4ffe-81e1-d01202914df5 C3L-04759 LUAD RNA-Seq_Transcript v1.4 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_RNA-Seq_Transcript_v1_LUAD_GBM.Transcript_20210415/C3L-04759.tissue_normal.transcripts.gtf.gz 19541335 gtf dce118c8b0e1a548dc0c480d06007c29 tissue_normal C3L-04759.RNA-Seq.R1.A e9fa0ea6-afa8-4429-8324-8804424c2b97 C3L-04759.RNA-Seq.R2.A 6beda164-3c9d-4cda-8f28-d235c978c091 C3L-04759 LUAD RNA-Seq_Transcript v1.4 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_RNA-Seq_Transcript_v1_LUAD_GBM.Transcript_20210415/C3L-04759.tumor.transcripts.gtf.gz 20743430 gtf f7c7c1a0f6e8b820a3f049bd81359b9f tumor C3L-04759.RNA-Seq.R1.T d2c086bc-623f-4a23-9cb3-80c53b597f24 C3L-04759.RNA-Seq.R2.T 848e757d-af1a-4b7a-b260-3551cbf21d80 +C3L-04761 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04761.gtf.transcripts.gtf.gz 16742080 gtf 5c390112af8618d2c9ed745533db874f tumor_bone_marrow C3L-04761.RNA-Seq.R1.Tbm f15b85cd-4f59-420d-b186-8cc631e57b4b C3L-04761.RNA-Seq.R2.Tbm 2986dc61-29bb-4478-9a20-d37b350606cd +C3L-04763 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04763.gtf.transcripts.gtf.gz 16838987 gtf 022837aad08025a8e7d301a22228ad5d tumor_bone_marrow C3L-04763.RNA-Seq.R1.Tbm c3a9b183-700e-4ae3-adc2-0ffade837bf0 C3L-04763.RNA-Seq.R2.Tbm ab31f876-7f37-41c3-960e-43702282f5be +C3L-04764 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04764.gtf.transcripts.gtf.gz 18010341 gtf 8a53ca53ed635d46b29e8b725910ff45 tumor_bone_marrow C3L-04764.RNA-Seq.R1.Tbm 370f0a2e-f908-4c28-9686-1f126fd58771 C3L-04764.RNA-Seq.R2.Tbm d253f323-45f9-4ceb-95d3-ac7d264bc1f8 +C3L-04766 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04766.gtf.transcripts.gtf.gz 17318117 gtf 5fab9ebaeb571aeb21433652d942ad2d tumor_bone_marrow C3L-04766.RNA-Seq.R1.Tbm e837050d-a525-4a5e-be38-9adaf277624c C3L-04766.RNA-Seq.R2.Tbm 38f58c9e-8d1b-4221-9c7d-80b4c1721651 +C3L-04767 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04767.gtf.transcripts.gtf.gz 18615905 gtf 211262e771edb85ae128033f95221e82 tumor_bone_marrow C3L-04767.RNA-Seq.R1.Tbm 92bee0be-2e91-47aa-9229-fced2412844b C3L-04767.RNA-Seq.R2.Tbm 5016063a-f737-41ec-b266-428eb7eb6c95 C3L-04786 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-04786.tissue_normal.transcripts.gtf.gz 19645212 gtf 6a96b4b75b55cccfd49908100cd00348 tissue_normal C3L-04786.RNA-Seq.R1.A cfc89afe-5f55-471c-8103-5252a5b696d1 C3L-04786.RNA-Seq.R2.A a0b1ffc3-b500-4406-878d-aed70e0fe282 C3L-04786 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-04786.tumor.transcripts.gtf.gz 19618400 gtf 186775ca6b70e7919569a7bae4eb3a45 tumor C3L-04786.RNA-Seq.R1.T 9ade8c4c-e0cb-4b9d-94e3-9221a03c8db9 C3L-04786.RNA-Seq.R2.T c35d2ca2-c670-4e53-abbc-ac7af4607258 C3L-04791 HNSCC RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/HNSCC/CPTAC3_HNSCC_RNA-Seq_Transcript_v1_Y2.b3_20190807/C3L-04791_tumor.transcripts.gtf.gz 21605698 gtf b5144493fc793a197c4f1d4b82c642f6 tumor C3L-04791.RNA-Seq.R1.T d2458585-b886-4b09-86a0-a0f29977f3af C3L-04791.RNA-Seq.R2.T 7c1c0732-04b1-46b5-9b86-f1eda6ccc0b3 @@ -1002,6 +1066,8 @@ C3L-04921 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_ C3L-04921 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-04921.tumor.transcripts.gtf.gz 21743680 gtf ba5d69631318fb49694aca54f58c31ff tumor C3L-04921.RNA-Seq.R1.T 4ed05607-7dec-4e7e-86c3-01b85e9c96e4 C3L-04921.RNA-Seq.R2.T 079c546b-c03b-4638-8cea-0d3fb3b6326c C3L-04922 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-04922.tissue_normal.transcripts.gtf.gz 21086204 gtf c4d6b7698737d1bd0678374644db3e88 tissue_normal C3L-04922.RNA-Seq.R1.A 88c980d2-f9dd-4f81-bb9f-6907d229b055 C3L-04922.RNA-Seq.R2.A 80027f20-5747-4f1a-84c7-efe9ef7d3bfd C3L-04922 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-04922.tumor.transcripts.gtf.gz 19693483 gtf 733bc1270e50928f7bcd9e9db06daaef tumor C3L-04922.RNA-Seq.R1.T 47f8b8c4-4dc0-41d8-a0bc-b943d8ecaaed C3L-04922.RNA-Seq.R2.T 0ab6b521-f980-4560-8c83-39e7d958f5ba +C3L-04971 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04971.gtf.transcripts.gtf.gz 20525517 gtf e33c75b4026d29455e73494e83a286a8 tumor_peripheral_blood C3L-04971.RNA-Seq.R1.Tpb d99c1f34-fb81-4eb9-a7cd-6633b8503c48 C3L-04971.RNA-Seq.R2.Tpb b75f533d-4b00-472f-840b-75cd60a4db83 +C3L-04976 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-04976.gtf.transcripts.gtf.gz 18227002 gtf ce5e25f2092cbf8d10435f44836889db tumor_peripheral_blood C3L-04976.RNA-Seq.R1.Tpb b086bac9-f82e-4f92-acb5-4ec2e8f3e1e2 C3L-04976.RNA-Seq.R2.Tpb 05cced7e-a63b-4b94-a784-1c918fb8fa37 C3L-05020 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-05020.tissue_normal.transcripts.gtf.gz 18937696 gtf 26b3bb780633004c2f25103ac9728a56 tissue_normal C3L-05020.RNA-Seq.R1.A f5ab75f7-4feb-46d2-ac3e-52984334b00e C3L-05020.RNA-Seq.R2.A 9d873937-00f9-4770-8b8e-71354acc37bd C3L-05020 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-05020.tumor.transcripts.gtf.gz 19668000 gtf e6999ff06edf861fa8c1973a66effdd2 tumor C3L-05020.RNA-Seq.R1.T f56cde44-a302-4e05-af29-99b841a4c531 C3L-05020.RNA-Seq.R2.T b3c3cc55-f3ce-4488-9edd-0e3451544107 C3L-05022 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-05022.tissue_normal.transcripts.gtf.gz 19780172 gtf 24322901846208ffa43c3e398f9dcdf5 tissue_normal C3L-05022.RNA-Seq.R1.A bef01d6f-1e3d-4082-8717-e9efcf6430f7 C3L-05022.RNA-Seq.R2.A 9a2e01f8-b26f-494f-b0bc-03d622bdf34e @@ -1023,8 +1089,23 @@ C3L-05221 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_ C3L-05225 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-05225.tissue_normal.transcripts.gtf.gz 20350269 gtf 1ff3c884a46fe1926625c4bf0585351e tissue_normal C3L-05225.RNA-Seq.R1.A 63c26280-83e5-40ef-90fa-dea67fca8d54 C3L-05225.RNA-Seq.R2.A 2656afbf-4bb5-47df-882d-696754d8467c C3L-05225 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-05225.tumor.transcripts.gtf.gz 20084942 gtf 43b8dfe54f383fc9e3819256ef423034 tumor C3L-05225.RNA-Seq.R1.T e06570ec-7adf-4b8e-80ff-f70a7eec89b0 C3L-05225.RNA-Seq.R2.T 383d18bb-9260-4acc-a5b3-6e80e90d638c C3L-05239 GBM RNA-Seq_Transcript v1.2 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1_LUAD_GBM.Transcript_20210415/C3L-05239.tumor.transcripts.gtf.gz 20311630 gtf 1a1bc66672d64527dcf846036e187f99 tumor C3L-05239.RNA-Seq.R1.T 8161f3a1-1b1a-442f-aaf3-faabd976c99a C3L-05239.RNA-Seq.R2.T b2cc1d59-536e-4c59-89df-f6808282e91f +C3L-05313 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05313.gtf.transcripts.gtf.gz 17539373 gtf 8bf63a8c8f8e7164c4e6eec4a936d77d tumor_bone_marrow C3L-05313.RNA-Seq.R1.Tbm 88212c9f-4a92-44be-acaa-3ff7e515ee07 C3L-05313.RNA-Seq.R2.Tbm a0bd7490-d7d8-4aa5-b785-90cb8408f484 +C3L-05315 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05315.gtf.transcripts.gtf.gz 16903155 gtf 2a9b6fead28fef4e525934c7484138ef tumor_peripheral_blood C3L-05315.RNA-Seq.R1.Tpb 20e0a682-ec84-4c52-85ca-70f82abf6c2a C3L-05315.RNA-Seq.R2.Tpb 19b29761-1f21-4660-80e5-6d704f08a5be +C3L-05316 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05316.gtf.transcripts.gtf.gz 17780698 gtf 1ab68eef3f03eb53764bd40603bddda0 tumor_bone_marrow C3L-05316.RNA-Seq.R1.Tbm fd3abe1d-c01d-4172-8a82-79a924db13a6 C3L-05316.RNA-Seq.R2.Tbm 306fd8bf-45ab-4a9a-abb2-e0bf1cd11927 +C3L-05317 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05317.gtf.transcripts.gtf.gz 20302903 gtf e457dbb44d65667ad07c5227546f9bbf tumor_peripheral_blood C3L-05317.RNA-Seq.R1.Tpb 96cae845-892d-45b4-82dd-abbb829ac7a0 C3L-05317.RNA-Seq.R2.Tpb 046e7c55-40fa-4464-8f56-7d45d33a0f08 +C3L-05318 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05318.gtf.transcripts.gtf.gz 18821829 gtf a2c34a18d981fba67d73efebc94a26a4 tumor_peripheral_blood C3L-05318.RNA-Seq.R1.Tpb 85c6c9ac-1d34-446a-9da4-27b08104b1d3 C3L-05318.RNA-Seq.R2.Tpb f0c73973-b3fc-4da0-9255-9d0f251fa09a +C3L-05320 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05320.gtf.transcripts.gtf.gz 16662763 gtf 50406e95beb9a3e050d478968489943a tumor_peripheral_blood C3L-05320.RNA-Seq.R1.Tpb 58fe5b7e-1e2b-4b7b-8160-ff95ac1e8243 C3L-05320.RNA-Seq.R2.Tpb 7b34f245-fca8-4c20-af9e-b8b66f6dfac3 +C3L-05325 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05325.gtf.transcripts.gtf.gz 17200523 gtf 609201807cce2797cb9816efd4f33b07 tumor_bone_marrow C3L-05325.RNA-Seq.R1.Tbm 9e0e8b18-e220-45e2-baea-b937188f3285 C3L-05325.RNA-Seq.R2.Tbm 6c64aa9e-f5cc-4d55-bdad-8ba6f69a4075 +C3L-05326 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05326.gtf.transcripts.gtf.gz 16840493 gtf 1f80fcb8aa5cbfe7ad48308253d740d7 tumor_bone_marrow C3L-05326.RNA-Seq.R1.Tbm f93b8cdc-388d-43ac-82ea-65102255812d C3L-05326.RNA-Seq.R2.Tbm 2efc1bcc-69be-4919-a672-f15e499562a7 +C3L-05329 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05329.gtf.transcripts.gtf.gz 17720250 gtf 6862d700df38b7dc871d6846fc7b0a7c tumor_bone_marrow C3L-05329.RNA-Seq.R1.Tbm db8f255b-3efc-4c13-a464-c72591e7a005 C3L-05329.RNA-Seq.R2.Tbm 5a5f7599-98e0-4f51-a77b-169bcfc351c8 +C3L-05331 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05331.gtf.transcripts.gtf.gz 17124750 gtf 5299bf6c98871f86e90720a35771e4e7 tumor_bone_marrow C3L-05331.RNA-Seq.R1.Tbm b151c6c4-6506-49eb-8799-962f84a085d2 C3L-05331.RNA-Seq.R2.Tbm f1081644-0d91-4026-91cd-bacd5ff76d52 +C3L-05334 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05334.gtf.transcripts.gtf.gz 16510412 gtf 3bdd9e42de3ba3d59c17d8a0074d079c tumor_bone_marrow C3L-05334.RNA-Seq.R1.Tbm e77c2a2d-dd02-46e6-a5d6-318bdb264914 C3L-05334.RNA-Seq.R2.Tbm 06f9c2be-9c21-41f3-9144-768393c3a873 +C3L-05335 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05335.gtf.transcripts.gtf.gz 16856819 gtf 7229696f42e339bc996fb01e52f40f9b tumor_bone_marrow C3L-05335.RNA-Seq.R1.Tbm 96bcd3c9-b405-404c-b043-9ae0e4398765 C3L-05335.RNA-Seq.R2.Tbm 98a9da44-38a6-4705-9b02-f2332e487e40 +C3L-05338 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05338.gtf.transcripts.gtf.gz 16390067 gtf f1150a8cda2688f91689abc871908c6c tumor_bone_marrow C3L-05338.RNA-Seq.R1.Tbm 8241771f-9643-4930-b2e7-9a475f409c7d C3L-05338.RNA-Seq.R2.Tbm 2866a4a3-9138-4b5f-81f8-58f3e929f704 C3L-05369 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-05369.tissue_normal.transcripts.gtf.gz 20357272 gtf f245166d777910916f183911121bd66e tissue_normal C3L-05369.RNA-Seq.R1.A 23c565cb-ff39-4479-ba64-97c7208229d7 C3L-05369.RNA-Seq.R2.A 9a8c552c-380a-4986-9f2d-f753e921b4fd C3L-05369 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-05369.tumor.transcripts.gtf.gz 20818623 gtf 85df94c2f565585e2030d898911b6f04 tumor C3L-05369.RNA-Seq.R1.T ba9f0249-aaf6-4c46-8dc5-ec1a00ac7f7c C3L-05369.RNA-Seq.R2.T 341a6501-69f2-414c-895f-a6f6b917dc1e +C3L-05386 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05386.gtf.transcripts.gtf.gz 17869738 gtf 612b8a633dd481eeb2638d495239b9cd tumor_peripheral_blood C3L-05386.RNA-Seq.R1.Tpb 4fdd7460-7eab-46d5-a864-87e57245fa68 C3L-05386.RNA-Seq.R2.Tpb 4f151513-bde8-4194-86ed-d3d9bd0b69a7 +C3L-05387 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05387.gtf.transcripts.gtf.gz 16536207 gtf e5cc95e43806a39376231d1fc2950981 tumor_peripheral_blood C3L-05387.RNA-Seq.R1.Tpb 9079bc71-b14d-4ae8-9ce3-023aa2f2ff11 C3L-05387.RNA-Seq.R2.Tpb 68a5d6f0-e119-426f-a564-b94fbf5ceb59 C3L-05392 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-05392.tissue_normal.transcripts.gtf.gz 20011370 gtf e354a2d4cf25e8f961870b53661b46ed tissue_normal C3L-05392.RNA-Seq.R1.A 359e3754-8a38-4bb2-ab30-f45104721810 C3L-05392.RNA-Seq.R2.A dca97796-2c4c-4d14-8074-a9614c031baf C3L-05392 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-05392.tumor.transcripts.gtf.gz 22668161 gtf 5b7c51ffb964730a6787ffcd160635a4 tumor C3L-05392.RNA-Seq.R1.T a09393b8-579c-4c23-aaf9-0601c79d9bca C3L-05392.RNA-Seq.R2.T 1c3d507a-a999-446e-a60c-f1d0861764ee C3L-05393 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-05393.tissue_normal.transcripts.gtf.gz 19590444 gtf 0f97121faae4f99fe18858e6ebe86c52 tissue_normal C3L-05393.RNA-Seq.R1.A b4c58689-6157-4915-a5e8-e2d2016488ee C3L-05393.RNA-Seq.R2.A bac04af1-f7b1-4e50-a673-3aa24bd26922 @@ -1051,13 +1132,93 @@ C3L-05427 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_ C3L-05427 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-05427.tumor.transcripts.gtf.gz 21252101 gtf 131e46a4fa24f8965a3de1e3c136b365 tumor C3L-05427.RNA-Seq.R1.T 1e71dff6-a4f6-4b2f-997b-97333d743138 C3L-05427.RNA-Seq.R2.T 0985bf86-4c08-4c25-b649-faf95cb52e85 C3L-05428 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-05428.tumor.transcripts.gtf.gz 20764620 gtf 0a849d15238066c3f7a9927af1b58f02 tumor C3L-05428.RNA-Seq.R1.T 5fabb5b3-0d33-4be8-92c3-d3239d33d978 C3L-05428.RNA-Seq.R2.T e5c5af32-42c1-4e4f-97f3-4bda6ed36973 C3L-05571 UCEC RNA-Seq_Transcript v1.2 20210310 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_RNA-Seq_Transcript_v1.2_UCEC_3_20210310/C3L-05571.transcripts.gtf.gz 19576964 gtf 70954f3c3af7a9aade403fc4b4118971 tumor C3L-05571.RNA-Seq.R1.T 81f527a8-8a38-474b-a8e7-fd70b107bfc4 C3L-05571.RNA-Seq.R2.T 9ee12b8b-d9df-4948-80c5-cc88369fd22f +C3L-05678 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05678.gtf.transcripts.gtf.gz 17242661 gtf be72a2931cf19fad2449ab3a2d4c7384 tumor_peripheral_blood C3L-05678.RNA-Seq.R1.Tpb 45e5054f-8448-4886-81a1-e3f10f0e9655 C3L-05678.RNA-Seq.R2.Tpb bb536e99-1c65-411e-8e81-25175f6e5b5e C3L-05693 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-05693.tissue_normal.transcripts.gtf.gz 20107498 gtf 09c73ba987e0669b886622d7b8aca645 tissue_normal C3L-05693.RNA-Seq.R1.A 41d75bd4-c284-404f-9997-d77ab8824fde C3L-05693.RNA-Seq.R2.A 7e52534b-ef33-46e8-938e-4141a128b64d C3L-05693 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-05693.tumor.transcripts.gtf.gz 22305371 gtf 00d7367cb175780cec8dec16874b640a tumor C3L-05693.RNA-Seq.R1.T 72528177-da54-44e1-9b6d-3461942f09a3 C3L-05693.RNA-Seq.R2.T fa73de66-06cd-4ffb-8d4e-a8bc87ac14db +C3L-05811 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05811.gtf.transcripts.gtf.gz 17606588 gtf a7dc7939c33c7f0512ee7216bd31b7ac tumor_peripheral_blood C3L-05811.RNA-Seq.R1.Tpb 6cb1b5aa-f403-498d-9050-f332ff16ac92 C3L-05811.RNA-Seq.R2.Tpb af2c450c-3d51-4d43-ba60-0d8eb62b45bf +C3L-05815 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05815.gtf.transcripts.gtf.gz 17003933 gtf 841381ea95d179ade7f3a18e493b7216 tumor_peripheral_blood C3L-05815.RNA-Seq.R1.Tpb fb78f19a-d92a-4214-934c-10228f1eedab C3L-05815.RNA-Seq.R2.Tpb b97520ae-3d6d-45bd-8432-fe15b935ee85 +C3L-05816 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05816.gtf.transcripts.gtf.gz 18823020 gtf 4dc480777ea43408c3b32c94899c03b5 tumor_peripheral_blood C3L-05816.RNA-Seq.R1.Tpb 6530a944-65a6-445f-acd2-40167a8ebabb C3L-05816.RNA-Seq.R2.Tpb 1a8aee28-cd05-4321-90b0-975466ae41ac +C3L-05818 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05818.gtf.transcripts.gtf.gz 17937965 gtf 84f234394e8580b67643752922a52fca tumor_peripheral_blood C3L-05818.RNA-Seq.R1.Tpb 6692d0fd-d8c6-44be-8d98-642dd6a372be C3L-05818.RNA-Seq.R2.Tpb 10684694-b8f8-4f79-9239-4b736dba2e74 +C3L-05819 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05819.gtf.transcripts.gtf.gz 17381139 gtf b9cce3e4b42b67669a0e10f25d89be46 tumor_peripheral_blood C3L-05819.RNA-Seq.R1.Tpb 66199b6f-b71a-40a8-94a5-abbdb0b4af76 C3L-05819.RNA-Seq.R2.Tpb 205ac3a6-e412-4af0-9756-1e35ba0fd4b3 C3L-05848 UCEC RNA-Seq_Transcript v1.2 20210310 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_RNA-Seq_Transcript_v1.2_UCEC_3_20210310/C3L-05848.transcripts.gtf.gz 21714709 gtf 8fa8fd0ca9f591169a9aebc7927de76e tumor C3L-05848.RNA-Seq.R1.T a20970a5-0b49-4d46-b295-01241bc3bddf C3L-05848.RNA-Seq.R2.T a1e74ea4-3a49-425b-9958-e27affeb1742 C3L-05849 UCEC RNA-Seq_Transcript v1.2 20210310 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_RNA-Seq_Transcript_v1.2_UCEC_3_20210310/C3L-05849.transcripts.gtf.gz 20656793 gtf e20d41f10fc2bc6c7a8e870715f21833 tumor C3L-05849.RNA-Seq.R1.T df1c6490-5106-4e02-945a-118b9cef06fb C3L-05849.RNA-Seq.R2.T 5fc90fb6-c5e7-4c8f-b9b0-1f19f87f64d9 +C3L-05861 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05861.gtf.transcripts.gtf.gz 17263759 gtf bfdbd1fbf238ccde6d0e49a9cea598c4 tumor_bone_marrow C3L-05861.RNA-Seq.R1.Tbm 074fab94-27aa-444e-b8c4-f06a6f3cdf3d C3L-05861.RNA-Seq.R2.Tbm a95b940a-0080-4dab-9c33-14af4ecce0ec +C3L-05862 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05862.gtf.transcripts.gtf.gz 18403353 gtf 26b143328203b880105f226b9598b209 tumor_peripheral_blood C3L-05862.RNA-Seq.R1.Tpb 30ae6399-c882-40b1-b4e9-ff2b6b57bb15 C3L-05862.RNA-Seq.R2.Tpb 16980c6a-440a-4af7-b908-4daa178678a3 +C3L-05865 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05865.gtf.transcripts.gtf.gz 18014744 gtf 1d7bde1ee3cdee0740cc1fef34d2ba57 tumor_bone_marrow C3L-05865.RNA-Seq.R1.Tbm f5fb6664-71c2-470c-b2f4-924a1a7f756b C3L-05865.RNA-Seq.R2.Tbm 5ce9ed2b-d5f6-4f16-bf27-ecb3979e86b6 +C3L-05866 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05866.gtf.transcripts.gtf.gz 17717321 gtf bc8014cde4cf29fd34779ddf01db17c3 tumor_bone_marrow C3L-05866.RNA-Seq.R1.Tbm 2735ec95-31b1-4110-8556-01db4b0c338c C3L-05866.RNA-Seq.R2.Tbm e2f0fe12-3f34-44cf-ae20-f306271c6117 +C3L-05867 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05867.gtf.transcripts.gtf.gz 18241681 gtf 55ac6d2d4b5ebb78799c3cd8131f06cf tumor_peripheral_blood C3L-05867.RNA-Seq.R1.Tpb 9f21ddc0-88a2-4e45-b9f7-326107a21ea6 C3L-05867.RNA-Seq.R2.Tpb c8eed0e7-ba2c-41c5-880e-6db790f15b69 +C3L-05870 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05870.gtf.transcripts.gtf.gz 17019400 gtf a3350fce8c5be2e7bbdd6dd056922a1f tumor_peripheral_blood C3L-05870.RNA-Seq.R1.Tpb 335a6971-98a0-48a8-9b22-caa10ab05757 C3L-05870.RNA-Seq.R2.Tpb e7c743d4-69ee-489c-a2be-d7fb39114b7d +C3L-05872 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05872.gtf.transcripts.gtf.gz 16364972 gtf e82fc065291418214b5e908aef8da98c tumor_bone_marrow C3L-05872.RNA-Seq.R1.Tbm cf380f3c-caa7-43f8-bd19-f3f0fe913af7 C3L-05872.RNA-Seq.R2.Tbm 3d5c0aaf-5d4e-44d6-b9d1-6aa6ab92911e +C3L-05874 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05874.gtf.transcripts.gtf.gz 18502396 gtf 51af2d97268e14722d4ac59e2a878907 tumor_bone_marrow C3L-05874.RNA-Seq.R1.Tbm 724820b5-bfc7-4b08-b081-3e10460c82b3 C3L-05874.RNA-Seq.R2.Tbm d76b214f-5d5f-4269-b983-96f4841a00ec +C3L-05877 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05877.gtf.transcripts.gtf.gz 17682151 gtf 4ec12bfa5614e12f42814bf50647ea9c tumor_bone_marrow C3L-05877.RNA-Seq.R1.Tbm 0f08c20b-f789-48d8-9a67-35b47b3e3930 C3L-05877.RNA-Seq.R2.Tbm d80143d6-e2d1-4d5a-9c37-43b0e76a67c0 +C3L-05880 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05880.gtf.transcripts.gtf.gz 17993729 gtf d3cf5715f68143c82fb691faa8b0dfd2 tumor_peripheral_blood C3L-05880.RNA-Seq.R1.Tpb b341d34c-1191-4519-a1ff-d26521ec8bfd C3L-05880.RNA-Seq.R2.Tpb cbbd3158-1f70-48a7-8e50-fda147c3d932 +C3L-05884 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05884.gtf.transcripts.gtf.gz 18485055 gtf e49190d2e1b15a65ba66801b0b836fbb tumor_bone_marrow C3L-05884.RNA-Seq.R1.Tbm 68dcca5d-e353-4166-a863-6f0b745448c0 C3L-05884.RNA-Seq.R2.Tbm c8974040-12ad-4bea-901a-dfa36fb0c963 +C3L-05887 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05887.gtf.transcripts.gtf.gz 18430880 gtf e84e1081bb5ded9febcbf6ce71999b2f tumor_bone_marrow C3L-05887.RNA-Seq.R1.Tbm 69cc26b8-f6df-4410-85ad-9a0e45e0eed5 C3L-05887.RNA-Seq.R2.Tbm e5b69001-5416-4cab-895c-b6bb1a523790 +C3L-05888 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05888.gtf.transcripts.gtf.gz 17863107 gtf 81b06e0d606d164a640def49d57cdff9 tumor_bone_marrow C3L-05888.RNA-Seq.R1.Tbm 7cdc741d-0a64-4e81-938a-cc4297d7cc3d C3L-05888.RNA-Seq.R2.Tbm 0b44d08b-a40e-42d2-a682-ace4760bc581 +C3L-05889 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05889.gtf.transcripts.gtf.gz 17545187 gtf 9176d19c67da04957e83d20d12df78a5 tumor_bone_marrow C3L-05889.RNA-Seq.R1.Tbm 334cd644-7914-4240-bced-4eb5fd48ef08 C3L-05889.RNA-Seq.R2.Tbm a1e0bf27-ddd9-4980-adaa-d01489605419 +C3L-05891 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05891.gtf.transcripts.gtf.gz 17582141 gtf 547016b18c0c0250ad006422f1d3d585 tumor_bone_marrow C3L-05891.RNA-Seq.R1.Tbm 5e9c334a-180d-4890-820b-7cd231323293 C3L-05891.RNA-Seq.R2.Tbm 2f95d192-8eb5-40a0-9b25-678d8ccd5016 +C3L-05892 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05892.gtf.transcripts.gtf.gz 18692893 gtf f176f306856d62bd671559b1a91ab259 tumor_bone_marrow C3L-05892.RNA-Seq.R1.Tbm 28189eba-fc3b-47fa-ac61-71b9c3fe1e29 C3L-05892.RNA-Seq.R2.Tbm 624dee72-97d3-4fe3-9653-94dd0f19793d +C3L-05894 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05894.gtf.transcripts.gtf.gz 16762223 gtf fa1228ccb3c7c70890e354a9de991978 tumor_bone_marrow C3L-05894.RNA-Seq.R1.Tbm 856e135f-034f-44f6-821f-65ac85cf7475 C3L-05894.RNA-Seq.R2.Tbm 50c8b190-4ce0-4bb4-8dc0-b1daf098b6af +C3L-05896 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05896.gtf.transcripts.gtf.gz 18070882 gtf 3216486166d30aad4133280701f2e68b tumor_peripheral_blood C3L-05896.RNA-Seq.R1.Tpb 311f9869-14ad-4d89-a131-5d510c836065 C3L-05896.RNA-Seq.R2.Tpb 7f023f41-7b84-4b3d-bb5e-85fae3e0d179 +C3L-05898 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05898.gtf.transcripts.gtf.gz 18170201 gtf 9477201608194e208fe99d7c752b0b43 tumor_peripheral_blood C3L-05898.RNA-Seq.R1.Tpb 13dade3a-17ec-4dcc-b306-27c6c282aebd C3L-05898.RNA-Seq.R2.Tpb 6717aa61-9187-4996-ae44-d79dd6e1b16d +C3L-05905 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05905.gtf.transcripts.gtf.gz 16684231 gtf ea9dfd37198c49313cd68e38c085b5c4 tumor_peripheral_blood C3L-05905.RNA-Seq.R1.Tpb 7fe72174-8147-453f-b08b-0502d721e5f0 C3L-05905.RNA-Seq.R2.Tpb 78fb450b-4932-417a-8a7b-c7a93b7ac885 +C3L-05907 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05907.gtf.transcripts.gtf.gz 16230238 gtf 960b542b3497f034c5e50a6a967189a9 tumor_bone_marrow C3L-05907.RNA-Seq.R1.Tbm e1b09891-6cfe-4899-b6c7-0c6286252c8f C3L-05907.RNA-Seq.R2.Tbm 6fe7fe10-f336-4191-bc15-6b18a17733e6 +C3L-05908 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-05908.gtf.transcripts.gtf.gz 17835980 gtf 087a80c137efdc92d9f2a3bd0e55d72e tumor_bone_marrow C3L-05908.RNA-Seq.R1.Tbm 0e1c76c8-7de2-4fd1-9057-cf88ed5ea0d2 C3L-05908.RNA-Seq.R2.Tbm 9aba5117-7ae3-416e-880d-7b1136939ec6 +C3L-06061 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06061.gtf.transcripts.gtf.gz 17916330 gtf ec36d9cf81d3c0d616550b21b4795ec8 tumor_bone_marrow C3L-06061.RNA-Seq.R1.Tbm 005d06a5-42a7-4ea5-ba2a-9bbbf8295f42 C3L-06061.RNA-Seq.R2.Tbm 8f38d303-fb14-433f-8cc2-b6ea37044a4f +C3L-06063 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06063.gtf.transcripts.gtf.gz 16469958 gtf 197a4251ff9f500d5f9926edda64f37f tumor_bone_marrow C3L-06063.RNA-Seq.R1.Tbm cea7d79a-f245-4cff-adc5-8b40e27d01ff C3L-06063.RNA-Seq.R2.Tbm d0b88942-9ee9-4d23-ac4a-1f6f6c466fd6 +C3L-06064 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06064.gtf.transcripts.gtf.gz 17132472 gtf 51611c57ff357a939e5c2043d84476bb tumor_bone_marrow C3L-06064.RNA-Seq.R1.Tbm dca6015e-b9bf-4f95-bc57-dd1dcf9c8df6 C3L-06064.RNA-Seq.R2.Tbm a5178138-97f9-4d77-8c44-2497d38911dc +C3L-06066 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06066.gtf.transcripts.gtf.gz 15472980 gtf 922bd882544de00698aef1033a2c5ce2 tumor_bone_marrow C3L-06066.RNA-Seq.R1.Tbm aca652c7-2628-4911-b25c-6c1796845e9f C3L-06066.RNA-Seq.R2.Tbm cbe87ee5-b45b-41f0-9a70-0b3ed678013a +C3L-06067 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06067.gtf.transcripts.gtf.gz 15562036 gtf c88bea91cc7be3bbaf26d8b51be54ee9 tumor_bone_marrow C3L-06067.RNA-Seq.R1.Tbm 89954f3c-da45-438a-b8a2-7dc1ad42230c C3L-06067.RNA-Seq.R2.Tbm 65b1537c-fbda-4372-b0a8-e3d8439618ac +C3L-06068 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06068.gtf.transcripts.gtf.gz 16517604 gtf 43947a68804c24d57bfd2571f9470639 tumor_bone_marrow C3L-06068.RNA-Seq.R1.Tbm 3c677a8d-3ac0-4ae0-abb2-c7df39a91396 C3L-06068.RNA-Seq.R2.Tbm 595a29b0-a6b9-4462-b007-c0bbaa069d36 +C3L-06069 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06069.gtf.transcripts.gtf.gz 16316739 gtf e0a4473210127a136e3da0a80a2e518e tumor_bone_marrow C3L-06069.RNA-Seq.R1.Tbm 09a525b6-cb9f-43eb-9c3c-a1a77e10456c C3L-06069.RNA-Seq.R2.Tbm 8a9086a9-e3d9-408d-aeb8-162c800d364c +C3L-06070 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06070.gtf.transcripts.gtf.gz 16292433 gtf 3dd92c009437fefd9aef320dd070b3d1 tumor_bone_marrow C3L-06070.RNA-Seq.R1.Tbm e971ec7c-cdd4-4dc7-a1fc-4441d77fefc9 C3L-06070.RNA-Seq.R2.Tbm ff2b4fc1-70a1-4d38-86a8-672a3a312966 +C3L-06072 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06072.gtf.transcripts.gtf.gz 17028509 gtf f562d4cc4e78f3cc41bee79b491315c4 tumor_peripheral_blood C3L-06072.RNA-Seq.R1.Tpb 82b7f51d-b538-4767-ae05-11d9894594c6 C3L-06072.RNA-Seq.R2.Tpb e54968f4-2495-4405-970e-709db0d36a14 +C3L-06073 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06073.gtf.transcripts.gtf.gz 17664546 gtf bf603aabbf2ea3118d5a9df58c159c80 tumor_bone_marrow C3L-06073.RNA-Seq.R1.Tbm 2a9f2071-6f43-42f7-8e78-249b76c494bb C3L-06073.RNA-Seq.R2.Tbm f74e6b9e-cdcf-4669-bf48-e344ed3459c6 +C3L-06074 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06074.gtf.transcripts.gtf.gz 17649951 gtf 1e366ca8351c09b74394bef3ba23c81e tumor_peripheral_blood C3L-06074.RNA-Seq.R1.Tpb 50dd645d-18fe-47a6-9c84-3ab2cc4920cf C3L-06074.RNA-Seq.R2.Tpb 1454570b-74ec-4b94-8d48-7c72d5f8470b +C3L-06075 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06075.gtf.transcripts.gtf.gz 18361967 gtf 62629c086a11dd645a177ba4210ff923 tumor_peripheral_blood C3L-06075.RNA-Seq.R1.Tpb 4d51a2e7-9fda-4770-a77b-c59c840ed0b6 C3L-06075.RNA-Seq.R2.Tpb 542b3afd-7589-453f-bc59-771b68fe1c25 +C3L-06081 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06081.gtf.transcripts.gtf.gz 17599150 gtf fc57bbead99d39be74907a563b644de5 tumor_bone_marrow C3L-06081.RNA-Seq.R1.Tbm 27d6ab0a-cbb7-40b9-af9e-a3e7a407b8a7 C3L-06081.RNA-Seq.R2.Tbm 8f431e06-a2ed-411c-834b-ac6573ec6994 +C3L-06082 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06082.gtf.transcripts.gtf.gz 17246000 gtf d3245dea737b9042ad28b4df7f357078 tumor_peripheral_blood C3L-06082.RNA-Seq.R1.Tpb 5de83077-6e32-4796-90d6-7742845fbd32 C3L-06082.RNA-Seq.R2.Tpb 3ed174f8-22b4-4d16-a3f7-82447ac3d34a +C3L-06087 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06087.gtf.transcripts.gtf.gz 16499708 gtf 1b81765f084be75a9ca6a9a295cc8964 tumor_peripheral_blood C3L-06087.RNA-Seq.R1.Tpb 2759438e-13fb-4a68-8f93-de762a312def C3L-06087.RNA-Seq.R2.Tpb 7e2cbc0b-182d-45ba-873e-ef9ce51ced6b +C3L-06089 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06089.gtf.transcripts.gtf.gz 16489471 gtf 26ca7eb8839ff50c5faba64730e3538c tumor_peripheral_blood C3L-06089.RNA-Seq.R1.Tpb b712df6d-c392-46bf-8466-ce7af45d8b74 C3L-06089.RNA-Seq.R2.Tpb 8279bbfd-fc68-4b8e-96d6-a830a752527b +C3L-06090 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06090.gtf.transcripts.gtf.gz 17095952 gtf d77a194be3a9a92a870041d59d61b834 tumor_peripheral_blood C3L-06090.RNA-Seq.R1.Tpb aced9574-d984-40e2-ad49-44cb32111bb8 C3L-06090.RNA-Seq.R2.Tpb 8a865415-1cd7-45e3-8b19-187d4a706914 C3L-06169 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-06169.tissue_normal.transcripts.gtf.gz 20726589 gtf 0a1fc0573ff8296ce75f76c882c1ccef tissue_normal C3L-06169.RNA-Seq.R1.A 36bc82c5-ec55-4d82-8120-70629a8fe622 C3L-06169.RNA-Seq.R2.A 3daa5c88-e40a-4e3c-83e5-612807b983de C3L-06169 LSCC RNA-Seq_Transcript v1.2 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_RNA-Seq_Transcript_v1.2_batch_821_20210916/C3L-06169.tumor.transcripts.gtf.gz 22242194 gtf 2c83b5ce8bdf31032204d96981008275 tumor C3L-06169.RNA-Seq.R1.T 3d44ddb4-1b20-43c1-9b8c-1edf4e3b2df3 C3L-06169.RNA-Seq.R2.T 1450f737-61b9-4fae-a7b5-9139ab891db3 +C3L-06352 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06352.gtf.transcripts.gtf.gz 17490455 gtf a893bfcacf9813cd90d336dd6f449c4d tumor_peripheral_blood C3L-06352.RNA-Seq.R1.Tpb 410f0722-f272-45d3-bb61-d02385a8dd41 C3L-06352.RNA-Seq.R2.Tpb 94ab1d18-35e2-4337-8e4c-79dc8f176cf7 +C3L-06356 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06356.gtf.transcripts.gtf.gz 16693475 gtf d7b6b70476e0c686ca5b9337ad760668 tumor_bone_marrow C3L-06356.RNA-Seq.R1.Tbm 982e7649-c13c-4393-b05e-0d1ac8228221 C3L-06356.RNA-Seq.R2.Tbm 42345a72-3860-463d-bccb-53bd28182ed9 +C3L-06357 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06357.gtf.transcripts.gtf.gz 17383419 gtf e59a117b0bc3127b8b3fedf0f180d0ed tumor_bone_marrow C3L-06357.RNA-Seq.R1.Tbm ec1e8eae-c0b1-4f4f-84a1-7c89b4de576a C3L-06357.RNA-Seq.R2.Tbm e5daae8a-9e87-4dde-a643-4063ff946fc6 +C3L-06361 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06361.gtf.transcripts.gtf.gz 17247503 gtf 126354beac5f2e6efe941cd554fe4c10 tumor_bone_marrow C3L-06361.RNA-Seq.R1.Tbm 22f88357-a1a0-4130-9373-ede06a3ee0d8 C3L-06361.RNA-Seq.R2.Tbm 44c74e6a-9e07-4895-9db3-443802ec3baa +C3L-06364 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06364.gtf.transcripts.gtf.gz 16705060 gtf 190cf6abac3aeae84910df0af64dfeeb tumor_bone_marrow C3L-06364.RNA-Seq.R1.Tbm 8d2c68f5-5586-4a61-8ade-0ab1e8ed4aee C3L-06364.RNA-Seq.R2.Tbm bae466cc-d600-4db8-a4bb-915e6fac032f +C3L-06367 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06367.gtf.transcripts.gtf.gz 18486932 gtf 2be12e08fd7d089e9b3ff6f836cb5eaa tumor_bone_marrow C3L-06367.RNA-Seq.R1.Tbm 9fb2e454-11e7-44fd-97a5-abd68cc50890 C3L-06367.RNA-Seq.R2.Tbm 9ff587b2-7250-4cae-b7f7-6be208c9ae33 +C3L-06369 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06369.gtf.transcripts.gtf.gz 18218234 gtf ff480fd5bd4e9a23a9823a43a484f22d tumor_bone_marrow C3L-06369.RNA-Seq.R1.Tbm 8912632e-66df-420c-9db6-8a5138fffedd C3L-06369.RNA-Seq.R2.Tbm 0d4ca071-c2ec-480b-ac31-4f78236b2d52 +C3L-06374 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06374.gtf.transcripts.gtf.gz 19550362 gtf a53d350269cb4f958c37cbbe8e1085ff tumor_bone_marrow C3L-06374.RNA-Seq.R1.Tbm 23a53be6-2568-49b6-9e77-cb0f8b763b6f C3L-06374.RNA-Seq.R2.Tbm 210f1b92-20ce-4c76-b450-9070622728bd +C3L-06386 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06386.gtf.transcripts.gtf.gz 17547103 gtf 4d1198178711440e9bb5b0dddd112664 tumor_peripheral_blood C3L-06386.RNA-Seq.R1.Tpb 455d60e4-3183-4728-a235-10f3a9e8adf1 C3L-06386.RNA-Seq.R2.Tpb 6934ddbf-b5e2-4486-8c78-acc7e79ad220 +C3L-06534 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06534.gtf.transcripts.gtf.gz 17572594 gtf 16484599031e9b8e3717db8cbfe2118a tumor_bone_marrow C3L-06534.RNA-Seq.R1.Tbm 5c9407bd-fb2c-4630-a594-3fe9336a1fdb C3L-06534.RNA-Seq.R2.Tbm 98809bf4-4138-472c-a8ac-931b6daef006 +C3L-06536 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06536.gtf.transcripts.gtf.gz 16385759 gtf 1a2af4160b05ffd7eced5ed5d679b7fe tumor_bone_marrow C3L-06536.RNA-Seq.R1.Tbm 2f8b0a00-f2c6-45b7-a639-638866d2f1df C3L-06536.RNA-Seq.R2.Tbm 57ee0236-540a-4ee1-988d-31a66667aa68 +C3L-06537 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06537.gtf.transcripts.gtf.gz 18154672 gtf c85fb3faba87b838acf2426d71c3928a tumor_bone_marrow C3L-06537.RNA-Seq.R1.Tbm 2129002c-5336-4aae-b19a-72c5e3c4f60b C3L-06537.RNA-Seq.R2.Tbm 8aaf31b8-a585-404c-aefa-a839c42b44b8 +C3L-06538 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06538.gtf.transcripts.gtf.gz 17732792 gtf 4410fb84bdb5819db653a7b42dcea008 tumor_bone_marrow C3L-06538.RNA-Seq.R1.Tbm 79f72bd1-ecb8-4efb-b830-f14ec5f1360d C3L-06538.RNA-Seq.R2.Tbm 680eb667-6251-4746-b73d-cebe3c1282f9 +C3L-06539 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06539.gtf.transcripts.gtf.gz 17457432 gtf 342064f9bcb37f5ab908e60d1b4af42c tumor_bone_marrow C3L-06539.RNA-Seq.R1.Tbm 3dad273f-fe63-445a-b5d4-68775e31b1ad C3L-06539.RNA-Seq.R2.Tbm d7eb624c-5723-4c25-8228-f7cd7a9423c9 +C3L-06540 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06540.gtf.transcripts.gtf.gz 17780920 gtf d002ae991cdf347bf7c71a53d9d9c098 tumor_bone_marrow C3L-06540.RNA-Seq.R1.Tbm e3dca2c2-f50b-4088-924c-d1006c1c1bc4 C3L-06540.RNA-Seq.R2.Tbm 240d81cf-3707-4eac-b01e-c66dd53b52dc +C3L-06541 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06541.gtf.transcripts.gtf.gz 16701882 gtf 61cbf8eab16f288533e998afad62510d tumor_bone_marrow C3L-06541.RNA-Seq.R1.Tbm 59d3d48b-d378-408b-9065-b5140f3209e5 C3L-06541.RNA-Seq.R2.Tbm 5636c15e-e465-415d-ad12-6e6240adb9e0 +C3L-06542 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06542.gtf.transcripts.gtf.gz 16696019 gtf f29ee21e4c54fb5c8a9848eca305ca07 tumor_bone_marrow C3L-06542.RNA-Seq.R1.Tbm cc62b62f-c0a1-4ebb-bc4a-d2725f1fe8c6 C3L-06542.RNA-Seq.R2.Tbm e1b044d8-b032-4630-9797-923d831a9915 +C3L-06543 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06543.gtf.transcripts.gtf.gz 17798022 gtf e86970fe15feca3844043be6a96d89f1 tumor_bone_marrow C3L-06543.RNA-Seq.R1.Tbm 77523715-551e-4c3b-901b-3fd1c151fe92 C3L-06543.RNA-Seq.R2.Tbm 8d808288-6ab7-42a6-9a1a-1d822136964b C3L-06625 GBM RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1.4_batch_1021_20211028/C3L-06625.tumor.transcripts.gtf.gz 20971568 gtf 5aaeffb1b80fb7314e6f024254e651d5 tumor C3L-06625.RNA-Seq.R1.T 54aee35f-9cd2-4a3b-9c49-dbffe0677d13 C3L-06625.RNA-Seq.R2.T 4a16d6ea-281b-440a-9157-095d8785f68a +C3L-06801 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06801.gtf.transcripts.gtf.gz 17428308 gtf e50648fda6db37f2e3efeb192b3d7ed6 tumor_bone_marrow C3L-06801.RNA-Seq.R1.Tbm 6c26ae3d-a9de-4c8b-aa18-8cfcb7f7e7fe C3L-06801.RNA-Seq.R2.Tbm f66374e3-8299-4707-a67b-3430583f0cf9 +C3L-06803 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06803.gtf.transcripts.gtf.gz 17926631 gtf f1b68f7c2bf133255f1c54aeb5367cac tumor_bone_marrow C3L-06803.RNA-Seq.R1.Tbm aff4657c-1c93-4991-bf9d-102858d36a82 C3L-06803.RNA-Seq.R2.Tbm 696539ea-5c89-4d92-a676-9753068e6958 +C3L-06806 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06806.gtf.transcripts.gtf.gz 18383505 gtf 7bab2c03a2dc02e766ef050fcf4075ee tumor_bone_marrow C3L-06806.RNA-Seq.R1.Tbm f5f11d2f-613f-48f1-ac63-f9064be02cb4 C3L-06806.RNA-Seq.R2.Tbm 585ffa5e-16be-4a73-b6be-685582e95dc2 +C3L-06807 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06807.gtf.transcripts.gtf.gz 18293434 gtf c94f6aedb803a102f411888be703eef6 tumor_bone_marrow C3L-06807.RNA-Seq.R1.Tbm fccb07d3-3428-4b00-ae11-1a0447e36d72 C3L-06807.RNA-Seq.R2.Tbm f7500ab8-09a8-4546-9672-945cb3e59038 +C3L-06809 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06809.gtf.transcripts.gtf.gz 16955634 gtf b71c970f30c4037707171d8ff546ae3d tumor_bone_marrow C3L-06809.RNA-Seq.R1.Tbm ed6cfd64-6e72-42b6-844e-88234f7dbd0f C3L-06809.RNA-Seq.R2.Tbm fa5593e4-49bc-4567-84aa-3e6ed2214956 +C3L-06951 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06951.gtf.transcripts.gtf.gz 19130082 gtf 5bc44e86b9c52d261e1445b29423003e tumor_bone_marrow C3L-06951.RNA-Seq.R1.Tbm 72612251-54a1-4fc4-a820-484b2c7da4b8 C3L-06951.RNA-Seq.R2.Tbm 73c35958-c9f9-474c-bf29-4a69904abece +C3L-06952 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06952.gtf.transcripts.gtf.gz 19108519 gtf d60b159dd66dd65ce118b00bd841c9b2 tumor_bone_marrow C3L-06952.RNA-Seq.R1.Tbm 782c5640-f8b7-45b8-ac5a-76650aa56634 C3L-06952.RNA-Seq.R2.Tbm 53e1a623-56d3-4599-b9a1-2d4e77e67906 +C3L-06953 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06953.gtf.transcripts.gtf.gz 18473821 gtf 6d771dad825b9eb12948f25758863b29 tumor_bone_marrow C3L-06953.RNA-Seq.R1.Tbm 5d86a6e3-615a-4394-991c-d9e3b53524ba C3L-06953.RNA-Seq.R2.Tbm c6aefb82-695a-4f31-9bc4-7b18ad9c12c5 +C3L-06954 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06954.gtf.transcripts.gtf.gz 17537368 gtf 7b25d1cd3a21c9478e238f921ba0dabf tumor_bone_marrow C3L-06954.RNA-Seq.R1.Tbm 6e69dd94-7aee-4c00-9685-cc4ba3fd648c C3L-06954.RNA-Seq.R2.Tbm a266ecc3-6056-4bf3-b120-43a4c9028a9e +C3L-06956 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06956.gtf.transcripts.gtf.gz 20128480 gtf 5d2b50398399f8eb087de258f85e2ef0 tumor_peripheral_blood C3L-06956.RNA-Seq.R1.Tpb 6a2d3cf1-f333-4a81-97ba-debd9fcf5bd9 C3L-06956.RNA-Seq.R2.Tpb 118a555b-6ad2-4592-ad23-800e55af36cf +C3L-06960 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06960.gtf.transcripts.gtf.gz 17181048 gtf 1d7269c67de4be3264c918cf8e0be69b tumor_peripheral_blood C3L-06960.RNA-Seq.R1.Tpb 15059745-078d-4e41-a58e-3aabce6b8e30 C3L-06960.RNA-Seq.R2.Tpb d4495785-79a6-4be9-a9eb-1d45af1c84a3 +C3L-06981 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06981.gtf.transcripts.gtf.gz 16980162 gtf b26f4facee87ae813cd4d64e3a1b5412 tumor_peripheral_blood C3L-06981.RNA-Seq.R1.Tpb 11b4e608-a77f-4c41-9687-928b46e0844a C3L-06981.RNA-Seq.R2.Tpb e6c8a6fe-6bba-4ed2-aec5-ba81545f6a4f +C3L-06982 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06982.gtf.transcripts.gtf.gz 16763453 gtf 2322a1b8464e5f76ce43a8498c047c0e tumor_peripheral_blood C3L-06982.RNA-Seq.R1.Tpb da3e229b-d868-4f5f-b075-be1171998087 C3L-06982.RNA-Seq.R2.Tpb 29246746-6940-47e6-b599-3f13ef906ad9 +C3L-06983 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06983.gtf.transcripts.gtf.gz 16044837 gtf a0c124c215b813fec54267b17fe971bd tumor_peripheral_blood C3L-06983.RNA-Seq.R1.Tpb 26518143-efc1-4a56-aa1e-c242a0f31641 C3L-06983.RNA-Seq.R2.Tpb 4642bc52-9725-4985-98d7-97a3c9ba89f5 +C3L-06984 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-06984.gtf.transcripts.gtf.gz 17065862 gtf 42ff64e9e75fd43bb4afdcf7a8e6b07d tumor_peripheral_blood C3L-06984.RNA-Seq.R1.Tpb c9020348-4ac7-45b2-8b26-0f3600eea6be C3L-06984.RNA-Seq.R2.Tpb d80c3794-a9dc-4b1b-8acc-12c57ffbe287 +C3L-07012 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-07012.gtf.transcripts.gtf.gz 16796700 gtf 094c057e5dbb169bae6dd8b9213b3935 tumor_bone_marrow C3L-07012.RNA-Seq.R1.Tbm bed0b6b6-1024-4b88-9ccd-f4702700ff3f C3L-07012.RNA-Seq.R2.Tbm 7b57f8ce-1e4c-4f0d-9d81-370bb7a90774 +C3L-07013 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-07013.gtf.transcripts.gtf.gz 16378736 gtf 3822548de2a2add018eebec51b36206e tumor_bone_marrow C3L-07013.RNA-Seq.R1.Tbm 17aeb355-fa4f-4ff5-9fd5-8d0e21aff2d3 C3L-07013.RNA-Seq.R2.Tbm 1023c6f2-892a-4949-82ec-e92440e8f394 C3L-07032 PDA RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1.4_batch_1021_20211028/C3L-07032.tissue_normal.transcripts.gtf.gz 19436545 gtf 3d8f58c8ac1adade0d981cfd8ca17419 tissue_normal C3L-07032.RNA-Seq.R1.A 88ba9750-4977-49cb-9058-c68e1b1b7570 C3L-07032.RNA-Seq.R2.A f37f4fc1-e819-471b-8ad1-0bf07194d51f C3L-07033 PDA RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1.4_batch_1021_20211028/C3L-07033.tissue_normal.transcripts.gtf.gz 19980912 gtf 10084f84cb1f956f5c7b2d448aa3fbb3 tissue_normal C3L-07033.RNA-Seq.R1.A 37537c02-5de7-4494-ae9e-e4e717f391fb C3L-07033.RNA-Seq.R2.A e074f8ea-87fc-499f-b028-738c12b62cbc C3L-07034 PDA RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1.4_batch_1021_20211028/C3L-07034.tissue_normal.transcripts.gtf.gz 17252737 gtf f4eebd18e4dbe5da7cbdcb226ee63be0 tissue_normal C3L-07034.RNA-Seq.R1.A 156bec6c-7178-4b00-8d6b-cb5bae408463 C3L-07034.RNA-Seq.R2.A d9794500-bac2-45f1-a463-d7e90fa594ab @@ -1066,6 +1227,9 @@ C3L-07036 PDA RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PD C3L-07037 PDA RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1.4_batch_1021_20211028/C3L-07037.tissue_normal.transcripts.gtf.gz 19793405 gtf ae977abbe982f92144b711077365b2cb tissue_normal C3L-07037.RNA-Seq.R1.A 3399328b-16f5-4c7a-8e1f-338368645ed8 C3L-07037.RNA-Seq.R2.A db70a6b8-672d-4a13-bd16-bd52d87843fe C3L-07202 GBM RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1.4_batch_1021_20211028/C3L-07202.tumor.transcripts.gtf.gz 20366035 gtf 1eccd5965f1a02baa02f4bde9a39934d tumor C3L-07202.RNA-Seq.R1.T 0d2a4b38-4741-48ac-bd06-58e5a7397594 C3L-07202.RNA-Seq.R2.T 9e0f8f05-b887-4c26-b196-f8d137d04b38 C3L-07213 GBM RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1.4_batch_1021_20211028/C3L-07213.tumor.transcripts.gtf.gz 20470790 gtf 2974d317dc5ab11fd5ff73e93697636d tumor C3L-07213.RNA-Seq.R1.T a3414943-3507-49d3-8c9f-c50c7721b209 C3L-07213.RNA-Seq.R2.T ea6ad82f-b787-4ee4-820c-f4b30dd9d61c +C3L-07437 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-07437.gtf.transcripts.gtf.gz 16455737 gtf 7165c91753c1da00d9641d057e8c1b93 tumor_peripheral_blood C3L-07437.RNA-Seq.R1.Tpb 19f81621-5e25-4547-9d95-f56513c37ea3 C3L-07437.RNA-Seq.R2.Tpb 37df23e8-805f-4e27-85cd-dc39f8570266 +C3L-07439 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-07439.gtf.transcripts.gtf.gz 16755645 gtf 769978a776552fa9926b8f55123958a6 tumor_peripheral_blood C3L-07439.RNA-Seq.R1.Tpb 8506fcf0-4ced-4a2a-90ed-878fa8d0f751 C3L-07439.RNA-Seq.R2.Tpb 691147a6-204e-4cfc-acf0-16b432c7ed3d +C3L-07490 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3L-07490.gtf.transcripts.gtf.gz 18472978 gtf 2f429f2da22dc7b234fb21b521e4d6e0 tumor_bone_marrow C3L-07490.RNA-Seq.R1.Tbm 2ebf6805-a5c8-43d5-8fee-730861c13580 C3L-07490.RNA-Seq.R2.Tbm 3215eaf9-a581-4e1b-b71b-3c96b7876cba C3L-07611 GBM RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1.4_batch_1021_20211028/C3L-07611.tumor.transcripts.gtf.gz 19946353 gtf 040f77d24cbe406836196220287df1a4 tumor C3L-07611.RNA-Seq.R1.T a19a4590-1bba-4407-8833-4c424dbd4e7a C3L-07611.RNA-Seq.R2.T 715c0803-92be-4427-84a0-318fb948c958 C3N-00148 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3N-00148.tissue_normal.transcripts.gtf.gz 21495642 gtf a8a7479d40d5eb4bfdf813fa445251d8 tissue_normal C3N-00148.RNA-Seq.R1.A e8912d94-cb0d-43a9-8162-74cfaa687f6b C3N-00148.RNA-Seq.R2.A 295e5db0-2734-4385-9867-95978059c72f C3N-00148 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3N-00148.tumor.transcripts.gtf.gz 22252314 gtf 25d90efb5428cc8b640e613bff700852 tumor C3N-00148.RNA-Seq.R1.T 48e2576c-57dd-4e80-8362-7c35daed4204 C3N-00148.RNA-Seq.R2.T a250f5fc-fc5b-45e1-83b7-9139dd06398e @@ -1205,6 +1369,7 @@ C3N-00438 CCRCC RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC C3N-00439 CCRCC RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.4_batch_1021_20211028/C3N-00439.tumor.transcripts.gtf.gz 20503139 gtf cbc6681ac7f5b2f35ac15e707e7059da tumor C3N-00439.RNA-Seq.R1.T d8da199c-0cc2-4309-bc89-fe4b9c98fab7 C3N-00439.RNA-Seq.R2.T 1b720778-8404-4f33-a358-821f2e4f9777 C3N-00440 CCRCC RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.4_batch_1021_20211028/C3N-00440.tumor.transcripts.gtf.gz 20104133 gtf 4342df4cb726ade5474258ec8ab642b4 tumor C3N-00440.RNA-Seq.R1.T 0348b2b8-436b-4639-bdaf-40055f305e33 C3N-00440.RNA-Seq.R2.T 5e9f02c8-b9eb-4052-a157-246587d91d0b C3N-00466 AML RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1_Y2.b3_20190807/C3N-00466_tumor_peripheral_blood.transcripts.gtf.gz 16862370 gtf 0f6a0ebd30119ac894669d1f98b0846d tumor_peripheral C3N-00466.RNA-Seq.R1.Tpb b69f393c-3bf9-4132-b5c1-238fc1859cb9 C3N-00466.RNA-Seq.R2.Tpb 5b6f2efe-8d73-4761-8059-bc09af777a4f +C3N-00466 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3N-00466.gtf.transcripts.gtf.gz 16863824 gtf b66de6313c5dd30b0d81d4323b0da0ae tumor_peripheral_blood C3N-00466.RNA-Seq.R1.Tpb b69f393c-3bf9-4132-b5c1-238fc1859cb9 C3N-00466.RNA-Seq.R2.Tpb 5b6f2efe-8d73-4761-8059-bc09af777a4f C3N-00491 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3N-00491.tissue_normal.transcripts.gtf.gz 21664103 gtf 4f64b5930f0049ae1b4f9707fc79bd15 tissue_normal C3N-00491.RNA-Seq.R1.A b4814c36-6e4b-45f5-91fa-79b5ec41ae42 C3N-00491.RNA-Seq.R2.A 07455c3f-d477-4c70-9b4b-00a44c06f8a3 C3N-00491 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3N-00491.tumor.transcripts.gtf.gz 20251035 gtf 5625cd484c5ca0f869aba592551949be tumor C3N-00491.RNA-Seq.R1.T 2f6994ee-d320-4923-af43-167c5670d988 C3N-00491.RNA-Seq.R2.T 2b86d9b0-c43d-4089-b72d-bc374d152fd0 C3N-00492 CCRCC RNA-Seq_Transcript v1.2 20200812 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.2_Y3.20200620_20200812/C3N-00492.tumor.transcripts.gtf.gz 22433220 gtf 6db97b43f3979fc5ff7c8cef1d2ba61e tumor C3N-00492.RNA-Seq.R1.T 24b6cd17-b856-4ca8-8ff1-ee1fa9c70e2b C3N-00492.RNA-Seq.R2.T 5ac1e5d2-0e4e-4e8e-9d94-fe318ed2a013 @@ -1281,11 +1446,18 @@ C3N-00646 CCRCC RNA-Seq_Transcript v1.3 20201217 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC C3N-00646 CCRCC RNA-Seq_Transcript v1.3 20201217 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1.3_RNA-Seq_Transcript.CCRCC_ITH_20201217/C3N-00646.HET_oP3onk.transcripts.gtf.gz 19524800 gtf 99738efc6ed78e64fdefc6c7e2295817 HET_oP3onk C3N-00646.RNA-Seq.R1.T.HET_oP3onk 58135a5f-972c-46ae-b682-2bceead9893f C3N-00646.RNA-Seq.R2.T.HET_oP3onk 85e77e19-8680-44c9-814f-638fd0c5444e C3N-00647 CCRCC RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1_Y2.b3_20190807/C3N-00647_tissue_normal.transcripts.gtf.gz 19527998 gtf d2283f4a026a344f2ed4406d16f7de84 tissue_normal C3N-00647.RNA-Seq.R1.A 0958c9a6-369b-446a-86c0-ecc7e7d30019 C3N-00647.RNA-Seq.R2.A 686db238-4c69-4121-bfe6-1068f0b41ffb C3N-00647 CCRCC RNA-Seq_Transcript v1 20190807 Y2 /CPTAC3.Y2_WashU/CCRCC/CPTAC3_CCRCC_RNA-Seq_Transcript_v1_Y2.b3_20190807/C3N-00647_tumor.transcripts.gtf.gz 18823399 gtf de4f984d9c013f42098c0987701e40b2 tumor C3N-00647.RNA-Seq.R1.T 6ff40b7b-a248-4450-83f0-fa2d4ab953e5 C3N-00647.RNA-Seq.R2.T 4518b250-94cf-447c-910e-a7a1d5a39dd6 +C3N-00651 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3N-00651.gtf.transcripts.gtf.gz 18738034 gtf c981b2868a2423633cdb11685d3945fb tumor_bone_marrow C3N-00651.RNA-Seq.R1.Tbm 3d2903bf-750c-414c-ae65-b73f000afdd5 C3N-00651.RNA-Seq.R2.Tbm 1f438bff-6f91-4102-ba36-a6fb12ff7561 +C3N-00656 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3N-00656.gtf.transcripts.gtf.gz 17291208 gtf 6ee9dc0dae0e27297f5a121e66bd51e4 tumor_bone_marrow C3N-00656.RNA-Seq.R1.Tbm 09c7e727-ce2c-490c-b68c-b07559b752a2 C3N-00656.RNA-Seq.R2.Tbm cc595190-cac9-45b0-8b20-c0155c59e122 +C3N-00659 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3N-00659.gtf.transcripts.gtf.gz 17808661 gtf 75ac669642eb84118e06370d33591ae8 tumor_bone_marrow C3N-00659.RNA-Seq.R1.Tbm 0c8e76d2-3765-43ef-8db4-bd090133aa01 C3N-00659.RNA-Seq.R2.Tbm bab7c676-7656-49e6-ae18-b8d29ce221be +C3N-00660 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3N-00660.gtf.transcripts.gtf.gz 19956706 gtf aca5ef6828f5a770cfce42b2c984d129 tumor_bone_marrow C3N-00660.RNA-Seq.R1.Tbm 33eae1fa-1a21-4b09-a234-53c313f73113 C3N-00660.RNA-Seq.R2.Tbm 029b0833-f4d5-4b3f-a5ae-1ffcf2da4470 C3N-00661 GBM RNA-Seq_Transcript v1 20190426 Y2 /CPTAC3.Y2_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1_Y2.b1_20190426/C3N-00661_tumor.transcripts.gtf.gz 21389660 gtf 5d0174e27109e3963c33d1857459b5f9 tumor C3N-00661.RNA-Seq.R1.T 0f21d54f-4e17-4dd1-8e30-aa61b33dfa23 C3N-00661.RNA-Seq.R2.T cb42cdf1-e194-4a1b-8bc8-64238ecc880b C3N-00662 GBM RNA-Seq_Transcript v1 20190426 Y2 /CPTAC3.Y2_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1_Y2.b1_20190426/C3N-00662_tumor.transcripts.gtf.gz 22489994 gtf 4fcdbadc8f518f77e9ce21cdfead8080 tumor C3N-00662.RNA-Seq.R1.T fe0a5bd8-4326-43e3-83ec-db254421bb70 C3N-00662.RNA-Seq.R2.T 661d6dae-cc63-4161-81eb-b7347bf223d0 C3N-00662 GBM RNA-Seq_Transcript v1.4 20211028 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1.4_batch_1021_20211028/C3N-00662.tumor.transcripts.gtf.gz 22520574 gtf d2f7060246008934af6d4b8d28a2aead tumor C3N-00662.scRNA-Seq.R1.T fe0a5bd8-4326-43e3-83ec-db254421bb70 C3N-00662.scRNA-Seq.R2.T 661d6dae-cc63-4161-81eb-b7347bf223d0 C3N-00663 GBM RNA-Seq_Transcript v1 20190426 Y2 /CPTAC3.Y2_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1_Y2.b1_20190426/C3N-00663_tumor.transcripts.gtf.gz 21524966 gtf 490175ea2085ba6b5f4df85ec6b960fc tumor C3N-00663.RNA-Seq.R1.T a81c70bb-e641-4704-9927-70d093da191b C3N-00663.RNA-Seq.R2.T 88fd4df9-3f7e-43df-8e34-e5a2f62d60a9 C3N-00665 GBM RNA-Seq_Transcript v1 20190426 Y2 /CPTAC3.Y2_WashU/GBM/CPTAC3_GBM_RNA-Seq_Transcript_v1_Y2.b1_20190426/C3N-00665_tumor.transcripts.gtf.gz 21353431 gtf 99ee468179cf44c7db93eec26e118fd4 tumor C3N-00665.RNA-Seq.R1.T 949887f9-0e80-4e58-a463-e2f4eca6f344 C3N-00665.RNA-Seq.R2.T 3cdd04b9-24fd-4cd0-adda-92fff85b4f2e +C3N-00681 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3N-00681.gtf.transcripts.gtf.gz 18066028 gtf ee1d5ac3d6aa3dff439dc199ee95c5c0 tumor_bone_marrow C3N-00681.RNA-Seq.R1.Tbm 182da2bf-ecc4-4df0-b857-d68da45b9a93 C3N-00681.RNA-Seq.R2.Tbm 670183c6-3c04-4e18-b129-3d104c270b33 +C3N-00682 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3N-00682.gtf.transcripts.gtf.gz 17097177 gtf 2ba11e2ab79145783f78778c6962dc2a tumor_bone_marrow C3N-00682.RNA-Seq.R1.Tbm 1e35d895-00c6-4c67-8a9a-5b05c85265d4 C3N-00682.RNA-Seq.R2.Tbm 92ed38f9-f775-446c-805f-b4ebcd834900 +C3N-00689 AML RNA-Seq_Transcript v1.2 20220419 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_RNA-Seq_Transcript_v1.2_AML_Transcript_20220419/C3N-00689.gtf.transcripts.gtf.gz 17216512 gtf 3d7daafaed441ba06468523f04a92383 tumor_bone_marrow C3N-00689.RNA-Seq.R1.Tbm a9fdc56b-5cdc-4b59-a7b3-037603f468e0 C3N-00689.RNA-Seq.R2.Tbm 739a1b27-ff73-43fe-aa21-b3005b66eb2a C3N-00704 LUAD RNA-Seq_Transcript v1.2 20210715 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_RNA-Seq_Transcript_v1.2_LUAD_99_20210715/C3N-00704.tissue_normal.transcripts.gtf.gz 20200726 gtf 4bdcb44a8efec321856106e9da75f864 tissue_normal C3N-00704.RNA-Seq.R1.A 84daa27c-2280-4bc2-b098-3ebe90dc4985 C3N-00704.RNA-Seq.R2.A 8d8a3157-9d5b-4941-9d37-a4c2856b1bfd C3N-00704 LUAD RNA-Seq_Transcript v1.2 20210715 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_RNA-Seq_Transcript_v1.2_LUAD_99_20210715/C3N-00704.tumor.transcripts.gtf.gz 22409826 gtf 7afa781c2f1354396d17792ed3001e6c tumor C3N-00704.RNA-Seq.R1.T a5373c83-5859-4af0-9cc8-d3362f26794b C3N-00704.RNA-Seq.R2.T 739f05f6-8611-4727-9603-118166c1ad30 C3N-00709 PDA RNA-Seq_Transcript v1.2 20200525 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_RNA-Seq_Transcript_v1.2_PDA.20200516_20200525/C3N-00709.tumor.transcripts.gtf.gz 21218730 gtf b667edfd37b8c86fe1c966352158ac80 tumor C3N-00709.RNA-Seq.R1.T 5533af10-acc9-4398-b820-c8b135255a5b C3N-00709.RNA-Seq.R2.T eba68b0b-e839-4a33-b3bc-c00412f3fe80