From c706206f227df52fc3c89e3ef50483fd05461ef2 Mon Sep 17 00:00:00 2001 From: "Matthew A. Wyczalkowski" Date: Fri, 16 Apr 2021 15:31:47 -0500 Subject: [PATCH] Updating version of recent submission of Germline pipeline * Was listed as v1.1, is actually v1.1b --- .../WXS_Germline.DCC_analysis_summary.dat | 334 +++++++++--------- 1 file changed, 167 insertions(+), 167 deletions(-) diff --git a/DCC_Analysis_Summary/WXS_Germline.DCC_analysis_summary.dat b/DCC_Analysis_Summary/WXS_Germline.DCC_analysis_summary.dat index 01a1747..615e013 100644 --- a/DCC_Analysis_Summary/WXS_Germline.DCC_analysis_summary.dat +++ b/DCC_Analysis_Summary/WXS_Germline.DCC_analysis_summary.dat @@ -117,11 +117,11 @@ C3L-00418 CCRCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRC C3L-00418 CCRCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-00418.filtered.AD.5.noLongINDELS.vcf.gz 6435519 VCF 6b3e69d2889d685fda56f5b75c65b253 C3L-00418.WXS.N.hg38 f04b336a-904d-4844-8737-4d84c04119c9 C3L-00422 LUAD WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-00422.filtered.ROI.AD.5.INDELS.NS.vcf.gz 686253 VCF e9b0630fb2043bf8a0f80e34b19187bd C3L-00422.WXS.N.hg38 79be3375-4849-4bb2-ac6e-f30cba74c8c2 C3L-00422 LUAD WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-00422.filtered.AD.5.noLongINDELS.vcf.gz 6753444 VCF a3afdf295cfac3255da79d13628272b8 C3L-00422.WXS.N.hg38 79be3375-4849-4bb2-ac6e-f30cba74c8c2 -C3L-00444 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-00444.filtered.AD.5.noLongINDELS.vcf.gz 6555454 VCF d5fc8807486f719da1baf696fb8cbbd0 C3L-00444.WXS.N.hg38 bdfb9339-ba92-4f83-bad7-80168a77a95e +C3L-00444 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-00444.filtered.AD.5.noLongINDELS.vcf.gz 6555454 VCF d5fc8807486f719da1baf696fb8cbbd0 C3L-00444.WXS.N.hg38 bdfb9339-ba92-4f83-bad7-80168a77a95e C3L-00445 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-00445.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 140ee58a0f0623b5375fd56d2ed73f54 C3L-00445.WXS.N.hg38 c84accfb-8a6a-4727-9b19-3ed0e410622e C3L-00445 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-00445.filtered.ROI.AD.5.INDELS.NS.vcf.gz 417031 VCF f9e442ea404cf0035f79ab6d85e51fb2 C3L-00445.WXS.N.hg38 c84accfb-8a6a-4727-9b19-3ed0e410622e C3L-00445 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-00445.filtered.AD.5.noLongINDELS.vcf.gz 3829980 VCF dfc2601d3b579293184de93ee2b743c3 C3L-00445.WXS.N.hg38 c84accfb-8a6a-4727-9b19-3ed0e410622e -C3L-00446 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-00446.filtered.AD.5.noLongINDELS.vcf.gz 6413916 VCF 26d0aa8574959be609e6abdd054cc6bb C3L-00446.WXS.N.hg38 04947b5f-dc66-4460-bff9-43d7e27fb097 +C3L-00446 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-00446.filtered.AD.5.noLongINDELS.vcf.gz 6413916 VCF 26d0aa8574959be609e6abdd054cc6bb C3L-00446.WXS.N.hg38 04947b5f-dc66-4460-bff9-43d7e27fb097 C3L-00447 CCRCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-00447.filtered.ROI.AD.5.INDELS.NS.vcf.gz 665840 VCF 8cf583fd16c806203647a7af3532faac C3L-00447.WXS.N.hg38 5fcfa123-8827-4519-aefb-b0189ae82dc8 C3L-00447 CCRCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-00447.filtered.AD.5.noLongINDELS.vcf.gz 6224994 VCF b4bf61ef179dab9c904d7e08739aa2fc C3L-00447.WXS.N.hg38 5fcfa123-8827-4519-aefb-b0189ae82dc8 C3L-00448 CCRCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-00448.filtered.ROI.AD.5.INDELS.NS.vcf.gz 651276 VCF f1bd817fd6796c85d5db8bf49f21c924 C3L-00448.WXS.N.hg38 6a64be8d-b163-43be-bba5-ed310b4603df @@ -328,7 +328,7 @@ C3L-01156 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_ C3L-01156 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-01156.filtered.AD.5.noLongINDELS.vcf.gz 6422599 VCF 90a12d4cd34c89933add4cb098b0db28 C3L-01156.WXS.N.hg38 a01efd96-c5e2-443c-91d0-fe67c00d2b7e C3L-01157 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-01157.filtered.ROI.AD.5.INDELS.NS.vcf.gz 680955 VCF fab1e07ae531dd7de3e305821ecef79a C3L-01157.WXS.N.hg38 4c548d4d-a644-43a2-ae5d-7d7b7ba59ac6 C3L-01157 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-01157.filtered.AD.5.noLongINDELS.vcf.gz 5980270 VCF 1341990890404705f2581f42ebc84845 C3L-01157.WXS.N.hg38 4c548d4d-a644-43a2-ae5d-7d7b7ba59ac6 -C3L-01232 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-01232.filtered.AD.5.noLongINDELS.vcf.gz 7215480 VCF 1b9d0aee43c89c23b9cd602d7abfaada C3L-01232.WXS.N.hg38 a65f1db8-170a-4ec2-a20b-e6deff964e2c +C3L-01232 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-01232.filtered.AD.5.noLongINDELS.vcf.gz 7215480 VCF 1b9d0aee43c89c23b9cd602d7abfaada C3L-01232.WXS.N.hg38 a65f1db8-170a-4ec2-a20b-e6deff964e2c C3L-01237 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-01237.filtered.ROI.AD.5.INDELS.NS.vcf.gz 687128 VCF e21f28bd2ce709a5f80943d471b3b822 C3L-01237.WXS.N.hg38 40c6aa8c-c701-4687-af81-78a019003241 C3L-01237 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-01237.filtered.AD.5.noLongINDELS.vcf.gz 6536880 VCF 4e80fcfdd20c2ea9f67dd213053749ea C3L-01237.WXS.N.hg38 40c6aa8c-c701-4687-af81-78a019003241 C3L-01246 UCEC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-01246.filtered.ROI.AD.5.INDELS.NS.vcf.gz 677411 VCF 6374fb3038acc4a7e057e3995ead1bca C3L-01246.WXS.N.hg38 e51f6394-96cc-4d48-954b-a578ccea4a6b @@ -464,7 +464,7 @@ C3L-02118 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS C3L-02127 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02127.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 140ee58a0f0623b5375fd56d2ed73f54 C3L-02127.WXS.N.hg38 e51e79c4-6465-4d37-834a-06eb40ebcfdc C3L-02127 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02127.filtered.ROI.AD.5.INDELS.NS.vcf.gz 410220 VCF 087a64b16a0bbe937fa9d32f7263c2ff C3L-02127.WXS.N.hg38 e51e79c4-6465-4d37-834a-06eb40ebcfdc C3L-02127 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02127.filtered.AD.5.noLongINDELS.vcf.gz 4001328 VCF 2794c430152143b9c99bdb59d92ff11b C3L-02127.WXS.N.hg38 e51e79c4-6465-4d37-834a-06eb40ebcfdc -C3L-02129 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02129.filtered.AD.5.noLongINDELS.vcf.gz 6367937 VCF 95cdf6407efc481c67a579525eaa5b90 C3L-02129.WXS.N.hg38 d708f0fa-314a-48f6-a20c-60c78c15aa2e +C3L-02129 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02129.filtered.AD.5.noLongINDELS.vcf.gz 6367937 VCF 95cdf6407efc481c67a579525eaa5b90 C3L-02129.WXS.N.hg38 d708f0fa-314a-48f6-a20c-60c78c15aa2e C3L-02130 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02130.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 140ee58a0f0623b5375fd56d2ed73f54 C3L-02130.WXS.N.hg38 22df6e39-0947-4591-82c0-6be07cbb8dbe C3L-02130 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02130.filtered.ROI.AD.5.INDELS.NS.vcf.gz 416952 VCF bcdc9f76b98a89734a1f86fef1927882 C3L-02130.WXS.N.hg38 22df6e39-0947-4591-82c0-6be07cbb8dbe C3L-02130 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02130.filtered.AD.5.noLongINDELS.vcf.gz 4402333 VCF 762e050091b1cf2daff57b78f3cdc7e9 C3L-02130.WXS.N.hg38 22df6e39-0947-4591-82c0-6be07cbb8dbe @@ -474,11 +474,11 @@ C3L-02163 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_ C3L-02164 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02164.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 140ee58a0f0623b5375fd56d2ed73f54 C3L-02164.WXS.N.hg38 2619f144-48ba-440e-9317-d91207766303 C3L-02164 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02164.filtered.ROI.AD.5.INDELS.NS.vcf.gz 410760 VCF 071d123f3fa0bb4bd4cda90ba2682f79 C3L-02164.WXS.N.hg38 2619f144-48ba-440e-9317-d91207766303 C3L-02164 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02164.filtered.AD.5.noLongINDELS.vcf.gz 3975343 VCF 3a7db3f0cb83e13012b636ee8f171433 C3L-02164.WXS.N.hg38 2619f144-48ba-440e-9317-d91207766303 -C3L-02165 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02165.filtered.AD.5.noLongINDELS.vcf.gz 6850578 VCF ac8166788dd398127aad5f011e410858 C3L-02165.WXS.N.hg38 c0bac254-c578-433f-866b-45c5cadb3b81 +C3L-02165 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02165.filtered.AD.5.noLongINDELS.vcf.gz 6850578 VCF ac8166788dd398127aad5f011e410858 C3L-02165.WXS.N.hg38 c0bac254-c578-433f-866b-45c5cadb3b81 C3L-02168 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02168.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 140ee58a0f0623b5375fd56d2ed73f54 C3L-02168.WXS.N.hg38 c47e4f68-1b43-479c-af27-f585fb5347f3 C3L-02168 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02168.filtered.ROI.AD.5.INDELS.NS.vcf.gz 420458 VCF 525805f360766836a5b65b7bdb23b87b C3L-02168.WXS.N.hg38 c47e4f68-1b43-479c-af27-f585fb5347f3 C3L-02168 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02168.filtered.AD.5.noLongINDELS.vcf.gz 4175327 VCF f03fcb933730dfeb83cdbc12e40b4e0f C3L-02168.WXS.N.hg38 c47e4f68-1b43-479c-af27-f585fb5347f3 -C3L-02169 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02169.filtered.AD.5.noLongINDELS.vcf.gz 6149432 VCF 06431e4a63f0636ccfaf6004b407e2ac C3L-02169.WXS.N.hg38 56701f8e-cbcb-4670-909d-0550fe95986a +C3L-02169 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02169.filtered.AD.5.noLongINDELS.vcf.gz 6149432 VCF 06431e4a63f0636ccfaf6004b407e2ac C3L-02169.WXS.N.hg38 56701f8e-cbcb-4670-909d-0550fe95986a C3L-02170 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02170.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 140ee58a0f0623b5375fd56d2ed73f54 C3L-02170.WXS.N.hg38 bbf1978b-1db4-4656-a991-70479d05d1f6 C3L-02170 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02170.filtered.ROI.AD.5.INDELS.NS.vcf.gz 401481 VCF 1d8e76b0b802346b3c1d85671e0df4c1 C3L-02170.WXS.N.hg38 bbf1978b-1db4-4656-a991-70479d05d1f6 C3L-02170 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02170.filtered.AD.5.noLongINDELS.vcf.gz 3387956 VCF 40df140b8d7ab7c0582096e62091d2ce C3L-02170.WXS.N.hg38 bbf1978b-1db4-4656-a991-70479d05d1f6 @@ -506,8 +506,8 @@ C3L-02504 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_ C3L-02504 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02504.filtered.AD.5.noLongINDELS.vcf.gz 8260600 VCF e7216ad70ee7707a70116196a654ff83 C3L-02504.WXS.N.hg38 ff07f11b-862a-4137-8e9a-0a609735348c C3L-02508 LUAD WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02508.filtered.ROI.AD.5.INDELS.NS.vcf.gz 702186 VCF cf497161ed9fc5930f3c03da89ad854d C3L-02508.WXS.N.hg38 9d738aaf-635d-49a5-893f-42852075b115 C3L-02508 LUAD WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02508.filtered.AD.5.noLongINDELS.vcf.gz 7736802 VCF a453cd0f1a398d7a22d6a7ad4c124482 C3L-02508.WXS.N.hg38 9d738aaf-635d-49a5-893f-42852075b115 -C3L-02513 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02513.filtered.AD.5.noLongINDELS.vcf.gz 7471226 VCF 9a03e763f37d65fe3d00c7c7e013fcda C3L-02513.WXS.N.hg38 4875073d-1a0c-47d5-83bc-78bfff58baa3 -C3L-02515 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02515.filtered.AD.5.noLongINDELS.vcf.gz 8045870 VCF 72e563e553f47104fab21a556657131b C3L-02515.WXS.N.hg38 e46c9137-6f97-4aa2-987d-49a6fd52a1ed +C3L-02513 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02513.filtered.AD.5.noLongINDELS.vcf.gz 7471226 VCF 9a03e763f37d65fe3d00c7c7e013fcda C3L-02513.WXS.N.hg38 4875073d-1a0c-47d5-83bc-78bfff58baa3 +C3L-02515 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02515.filtered.AD.5.noLongINDELS.vcf.gz 8045870 VCF 72e563e553f47104fab21a556657131b C3L-02515.WXS.N.hg38 e46c9137-6f97-4aa2-987d-49a6fd52a1ed C3L-02542 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02542.filtered.ROI.AD.5.INDELS.NS.vcf.gz 712622 VCF fd25d89a9e54ae3e07adb4eba8c5e6f6 C3L-02542.WXS.N.hg38 04eb406b-04cb-4ba0-8f2b-1206bc574cb6 C3L-02542 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02542.filtered.AD.5.noLongINDELS.vcf.gz 9382429 VCF bb011c8407410d65c4733b8e3b955b02 C3L-02542.WXS.N.hg38 04eb406b-04cb-4ba0-8f2b-1206bc574cb6 C3L-02546 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02546.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 140ee58a0f0623b5375fd56d2ed73f54 C3L-02546.WXS.N.hg38 0719d8d5-91a8-45b2-8bd3-6417ae7b6797 @@ -518,9 +518,9 @@ C3L-02549 LUAD WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_ C3L-02552 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02552.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 140ee58a0f0623b5375fd56d2ed73f54 C3L-02552.WXS.N.hg38 cea1e94c-03a7-498c-ba3b-86b4eba52707 C3L-02552 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02552.filtered.ROI.AD.5.INDELS.NS.vcf.gz 402896 VCF 69329d94b92a84709ef49056fb4dc8d0 C3L-02552.WXS.N.hg38 cea1e94c-03a7-498c-ba3b-86b4eba52707 C3L-02552 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02552.filtered.AD.5.noLongINDELS.vcf.gz 3527173 VCF 6e304882caa09ab3e1bf7af6aff41104 C3L-02552.WXS.N.hg38 cea1e94c-03a7-498c-ba3b-86b4eba52707 -C3L-02559 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02559.filtered.AD.5.noLongINDELS.vcf.gz 6737792 VCF 0728bc6d0104ffea5e0d284bb911c123 C3L-02559.WXS.N.hg38 29e7ae17-8028-4a91-b96d-68fdd332a31e -C3L-02560 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02560.filtered.AD.5.noLongINDELS.vcf.gz 6801892 VCF 281c96bdc9c9732a9574eaf5193519c3 C3L-02560.WXS.N.hg38 300a3333-08df-486e-87f3-9a149558de8d -C3L-02601 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02601.filtered.AD.5.noLongINDELS.vcf.gz 6047404 VCF 5d4bd44fd4b0fb254d33c3e34eb59f17 C3L-02601.WXS.N.hg38 e7dc058e-3ee2-4aea-8374-2e07b7911d97 +C3L-02559 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02559.filtered.AD.5.noLongINDELS.vcf.gz 6737792 VCF 0728bc6d0104ffea5e0d284bb911c123 C3L-02559.WXS.N.hg38 29e7ae17-8028-4a91-b96d-68fdd332a31e +C3L-02560 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02560.filtered.AD.5.noLongINDELS.vcf.gz 6801892 VCF 281c96bdc9c9732a9574eaf5193519c3 C3L-02560.WXS.N.hg38 300a3333-08df-486e-87f3-9a149558de8d +C3L-02601 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02601.filtered.AD.5.noLongINDELS.vcf.gz 6047404 VCF 5d4bd44fd4b0fb254d33c3e34eb59f17 C3L-02601.WXS.N.hg38 e7dc058e-3ee2-4aea-8374-2e07b7911d97 C3L-02604 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02604.filtered.ROI.AD.5.INDELS.NS.vcf.gz 687207 VCF 29e508bfe54a66ad4c14e31d188775e5 C3L-02604.WXS.N.hg38 c6cce528-cf2e-4b13-8aac-0c86bf947b98 C3L-02604 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02604.filtered.AD.5.noLongINDELS.vcf.gz 6915878 VCF ea4a924c242f091c624aa5466c208b87 C3L-02604.WXS.N.hg38 c6cce528-cf2e-4b13-8aac-0c86bf947b98 C3L-02606 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02606.filtered.ROI.AD.5.INDELS.NS.vcf.gz 693351 VCF f565961d7727a60753673d8043a0b918 C3L-02606.WXS.N.hg38 afe3616b-0a2a-4ee2-b086-0ad1c52a2eb0 @@ -529,7 +529,7 @@ C3L-02610 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_ C3L-02610 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02610.filtered.AD.5.noLongINDELS.vcf.gz 7898883 VCF 334629ef54b90e688acc9fc36c3ad026 C3L-02610.WXS.N.hg38 cb627c7d-0371-41ea-a1ed-0688d7ed1ab7 C3L-02613 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02613.filtered.ROI.AD.5.INDELS.NS.vcf.gz 671412 VCF 385f70d17a5047bbb4721f25bb5d925c C3L-02613.WXS.N.hg38 67441851-d1cb-40d0-aad2-bd52024f41fb C3L-02613 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02613.filtered.AD.5.noLongINDELS.vcf.gz 6822407 VCF 1bb79543a64559256a8834f75dbefd81 C3L-02613.WXS.N.hg38 67441851-d1cb-40d0-aad2-bd52024f41fb -C3L-02616 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02616.filtered.AD.5.noLongINDELS.vcf.gz 6699809 VCF 40ceb760b614b5c373fd606124aef415 C3L-02616.WXS.N.hg38 722af924-f5aa-4616-bb20-ab9ac54fca4e +C3L-02616 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02616.filtered.AD.5.noLongINDELS.vcf.gz 6699809 VCF 40ceb760b614b5c373fd606124aef415 C3L-02616.WXS.N.hg38 722af924-f5aa-4616-bb20-ab9ac54fca4e C3L-02617 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02617.filtered.ROI.AD.5.INDELS.NS.vcf.gz 717921 VCF 468524d9d5f745ad4408a18683554ff2 C3L-02617.WXS.N.hg38.high_cov bd478f09-96b6-4479-87ad-2566ff4b5377 C3L-02617 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02617.filtered.AD.5.noLongINDELS.vcf.gz 7123828 VCF 58eb1eb2c88ee23c3007eff236529f40 C3L-02617.WXS.N.hg38.high_cov bd478f09-96b6-4479-87ad-2566ff4b5377 C3L-02619 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02619.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 140ee58a0f0623b5375fd56d2ed73f54 C3L-02619.WXS.N.hg38 34a67dfe-a2d6-474f-a7e9-3c29d9dae9f8 @@ -551,8 +551,8 @@ C3L-02629 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_W C3L-02629 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02629.filtered.AD.5.noLongINDELS.vcf.gz 3833452 VCF e8bc739d1fc3bfdea668880edf8da5c9 C3L-02629.WXS.N.hg38 899cf82a-0664-4a9b-9b46-03a762cbfef6 C3L-02642 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02642.filtered.ROI.AD.5.INDELS.NS.vcf.gz 678414 VCF 007025fac44eaa173ed67912e8a58274 C3L-02642.WXS.N.hg38 4322defa-c5c1-415a-897a-e74645aebfc2 C3L-02642 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02642.filtered.AD.5.noLongINDELS.vcf.gz 5990604 VCF 9eec89798d08b180346c0f1cbb421442 C3L-02642.WXS.N.hg38 4322defa-c5c1-415a-897a-e74645aebfc2 -C3L-02643 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02643.filtered.AD.5.noLongINDELS.vcf.gz 6296385 VCF 45a74f51580a909b1d9049fc9034abbd C3L-02643.WXS.N.hg38 5099a7f9-cdfc-4fa9-949f-7461f7e52f22 -C3L-02644 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02644.filtered.AD.5.noLongINDELS.vcf.gz 6500501 VCF a9917de36bdff79060457542ab8710ec C3L-02644.WXS.N.hg38 d691a770-edf9-435f-9288-c9139d4c9f4c +C3L-02643 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02643.filtered.AD.5.noLongINDELS.vcf.gz 6296385 VCF 45a74f51580a909b1d9049fc9034abbd C3L-02643.WXS.N.hg38 5099a7f9-cdfc-4fa9-949f-7461f7e52f22 +C3L-02644 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02644.filtered.AD.5.noLongINDELS.vcf.gz 6500501 VCF a9917de36bdff79060457542ab8710ec C3L-02644.WXS.N.hg38 d691a770-edf9-435f-9288-c9139d4c9f4c C3L-02646 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02646.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 140ee58a0f0623b5375fd56d2ed73f54 C3L-02646.WXS.N.hg38 3ec28d87-2158-4bc0-a3b4-7a1c7d9baff8 C3L-02646 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02646.filtered.ROI.AD.5.INDELS.NS.vcf.gz 403345 VCF b3b086c2e0f87e3859cf19bf23702cff C3L-02646.WXS.N.hg38 3ec28d87-2158-4bc0-a3b4-7a1c7d9baff8 C3L-02646 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02646.filtered.AD.5.noLongINDELS.vcf.gz 3279317 VCF 6f4ba2841e8d4a74f117c2ead82fba65 C3L-02646.WXS.N.hg38 3ec28d87-2158-4bc0-a3b4-7a1c7d9baff8 @@ -567,12 +567,12 @@ C3L-02650 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_W C3L-02650 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02650.filtered.AD.5.noLongINDELS.vcf.gz 3925206 VCF 9f258a05b3f805b61f69ad327386216d C3L-02650.WXS.N.hg38 07577c36-658a-4b52-97c4-bf6f818dae04 C3L-02651 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02651.filtered.ROI.AD.5.INDELS.NS.vcf.gz 685779 VCF d77bb17c0f8d810784ce77218207b8b3 C3L-02651.WXS.N.hg38 31310f51-6711-494c-8ed4-f1ff18b29f3d C3L-02651 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02651.filtered.AD.5.noLongINDELS.vcf.gz 5744174 VCF be1b9fe91784e1ecaac49aec0a3f464c C3L-02651.WXS.N.hg38 31310f51-6711-494c-8ed4-f1ff18b29f3d -C3L-02654 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02654.filtered.AD.5.noLongINDELS.vcf.gz 7285823 VCF 985afdd3e0d4c30487c867c890c32975 C3L-02654.WXS.N.hg38 cfcbfce1-9939-4fa6-bf02-758c2c705652 +C3L-02654 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02654.filtered.AD.5.noLongINDELS.vcf.gz 7285823 VCF 985afdd3e0d4c30487c867c890c32975 C3L-02654.WXS.N.hg38 cfcbfce1-9939-4fa6-bf02-758c2c705652 C3L-02660 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02660.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 140ee58a0f0623b5375fd56d2ed73f54 C3L-02660.WXS.N.hg38 8123ed94-befe-4a1f-9cc1-234fbd1f8504 C3L-02660 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02660.filtered.ROI.AD.5.INDELS.NS.vcf.gz 424200 VCF 335cc68565874ff3d3acdb91ba4bd68a C3L-02660.WXS.N.hg38 8123ed94-befe-4a1f-9cc1-234fbd1f8504 C3L-02660 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02660.filtered.AD.5.noLongINDELS.vcf.gz 4133175 VCF 3c167ca6f08d14bf546407578eea2884 C3L-02660.WXS.N.hg38 8123ed94-befe-4a1f-9cc1-234fbd1f8504 -C3L-02661 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02661.filtered.AD.5.noLongINDELS.vcf.gz 6850030 VCF a9bd750b50bafd0c13c7f78f4acafd91 C3L-02661.WXS.N.hg38 5b8a86a3-1882-4fe3-973a-b087fd0a1d81 -C3L-02662 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02662.filtered.AD.5.noLongINDELS.vcf.gz 7314125 VCF 0a8b2f1e0be32a5f237133c55b4e566d C3L-02662.WXS.N.hg38 483ee610-f803-4aa9-953c-6d1a197e0e8e +C3L-02661 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02661.filtered.AD.5.noLongINDELS.vcf.gz 6850030 VCF a9bd750b50bafd0c13c7f78f4acafd91 C3L-02661.WXS.N.hg38 5b8a86a3-1882-4fe3-973a-b087fd0a1d81 +C3L-02662 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02662.filtered.AD.5.noLongINDELS.vcf.gz 7314125 VCF 0a8b2f1e0be32a5f237133c55b4e566d C3L-02662.WXS.N.hg38 483ee610-f803-4aa9-953c-6d1a197e0e8e C3L-02665 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02665.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 140ee58a0f0623b5375fd56d2ed73f54 C3L-02665.WXS.N.hg38 9db5fa11-bd55-4e4e-b441-21e5c745a879 C3L-02665 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02665.filtered.ROI.AD.5.INDELS.NS.vcf.gz 423627 VCF 8c3bccca8b6d6b569205ea83c43ccc51 C3L-02665.WXS.N.hg38 9db5fa11-bd55-4e4e-b441-21e5c745a879 C3L-02665 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02665.filtered.AD.5.noLongINDELS.vcf.gz 3852579 VCF 0ba589c2d97e9a7f29cc16f7c42196dd C3L-02665.WXS.N.hg38 9db5fa11-bd55-4e4e-b441-21e5c745a879 @@ -591,13 +591,13 @@ C3L-02708 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_ C3L-02708 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02708.filtered.AD.5.noLongINDELS.vcf.gz 6353169 VCF b1f2bf90167a65e09878db584a03b4de C3L-02708.WXS.N.hg38 2bc3e092-fb76-4260-b4bc-d2fbe2f6c697 C3L-02809 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02809.filtered.ROI.AD.5.INDELS.NS.vcf.gz 693011 VCF 32bf524e7d7ac3629b82e5dc9607165b C3L-02809.WXS.N.hg38 943a11ee-ac73-4d2b-a82f-900e3899f5dc C3L-02809 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02809.filtered.AD.5.noLongINDELS.vcf.gz 7316675 VCF 3a0a6dcfbcc73ba69b07e16448e8edf4 C3L-02809.WXS.N.hg38 943a11ee-ac73-4d2b-a82f-900e3899f5dc -C3L-02834 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02834.filtered.AD.5.noLongINDELS.vcf.gz 6742873 VCF 55e85b69b28e435a6e7524e8725e4ddb C3L-02834.WXS.N.hg38 02884bf9-19df-4592-b58d-05a50a2c957a +C3L-02834 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02834.filtered.AD.5.noLongINDELS.vcf.gz 6742873 VCF 55e85b69b28e435a6e7524e8725e4ddb C3L-02834.WXS.N.hg38 02884bf9-19df-4592-b58d-05a50a2c957a C3L-02890 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02890.filtered.ROI.AD.5.INDELS.NS.vcf.gz 701101 VCF 87e542ac371729d6dc1abdd067252cab C3L-02890.WXS.N.hg38 085bc27e-577d-4c57-b74a-479692f48de0 C3L-02890 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02890.filtered.AD.5.noLongINDELS.vcf.gz 6767647 VCF ef9288c5908503261161b4aa957e97d2 C3L-02890.WXS.N.hg38 085bc27e-577d-4c57-b74a-479692f48de0 C3L-02891 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02891.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 140ee58a0f0623b5375fd56d2ed73f54 C3L-02891.WXS.N.hg38 c15eaede-f5db-4ac7-a092-a780a9644873 C3L-02891 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02891.filtered.ROI.AD.5.INDELS.NS.vcf.gz 414650 VCF 5830f92d33a69a11acd1894ea032391a C3L-02891.WXS.N.hg38 c15eaede-f5db-4ac7-a092-a780a9644873 C3L-02891 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02891.filtered.AD.5.noLongINDELS.vcf.gz 4023777 VCF 63de3b81c5b7ad89078ff96e10723230 C3L-02891.WXS.N.hg38 c15eaede-f5db-4ac7-a092-a780a9644873 -C3L-02893 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02893.filtered.AD.5.noLongINDELS.vcf.gz 6704850 VCF b50ab53ca5076e78415d3c0e9226873c C3L-02893.WXS.N.hg38 58f5c055-22a9-4811-b0cd-ac8a51d7f443 +C3L-02893 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02893.filtered.AD.5.noLongINDELS.vcf.gz 6704850 VCF b50ab53ca5076e78415d3c0e9226873c C3L-02893.WXS.N.hg38 58f5c055-22a9-4811-b0cd-ac8a51d7f443 C3L-02897 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02897.filtered.ROI.AD.5.INDELS.NS.vcf.gz 693319 VCF 0783b75d56770d4f36e2d2548169ad73 C3L-02897.WXS.N.hg38 09a6cd39-77f2-4d56-8877-11c05369e891 C3L-02897 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02897.filtered.AD.5.noLongINDELS.vcf.gz 7480494 VCF 49af4c81a247d4f91e182343e727b9f0 C3L-02897.WXS.N.hg38 09a6cd39-77f2-4d56-8877-11c05369e891 C3L-02899 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02899.filtered.ROI.AD.5.INDELS.NS.vcf.gz 692413 VCF 8b085d436f4a33b3d35887a4e3cc8c6e C3L-02899.WXS.N.hg38 77728f8c-fe5d-42b7-8d8c-ccb36208cbe4 @@ -607,19 +607,19 @@ C3L-02900 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS C3L-02951 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02951.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3L-02951.WXS.N.hg38 e8287cd5-5064-4d21-acb7-0bf366e3a13a C3L-02951 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02951.filtered.ROI.AD.5.INDELS.NS.vcf.gz 417496 VCF d2e2e9780a5b364291171d4ee085f839 C3L-02951.WXS.N.hg38 e8287cd5-5064-4d21-acb7-0bf366e3a13a C3L-02951 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02951.filtered.AD.5.noLongINDELS.vcf.gz 4266428 VCF 7aeb888d515d5c3dfb62469ef259e780 C3L-02951.WXS.N.hg38 e8287cd5-5064-4d21-acb7-0bf366e3a13a -C3L-02954 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02954.filtered.AD.5.noLongINDELS.vcf.gz 8231304 VCF e3451fbec43a7cc40b16fc1483badbfc C3L-02954.WXS.N.hg38 afc79d7a-98b1-44c9-8e16-4c80c19bc429 +C3L-02954 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02954.filtered.AD.5.noLongINDELS.vcf.gz 8231304 VCF e3451fbec43a7cc40b16fc1483badbfc C3L-02954.WXS.N.hg38 afc79d7a-98b1-44c9-8e16-4c80c19bc429 C3L-02955 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02955.filtered.ROI.AD.5.INDELS.NS.vcf.gz 719767 VCF be4761070244a6bfaa2ee232cd763108 C3L-02955.WXS.N.hg38 535274f1-2bca-41a0-923b-ec0e1b8c5440 C3L-02955 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02955.filtered.AD.5.noLongINDELS.vcf.gz 7524523 VCF 341e64333b00303c925c636b67e13c75 C3L-02955.WXS.N.hg38 535274f1-2bca-41a0-923b-ec0e1b8c5440 -C3L-02957 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02957.filtered.AD.5.noLongINDELS.vcf.gz 6969353 VCF 55ef42448b34126b85756e7d0727abb7 C3L-02957.WXS.N.hg38 89ea2f30-a1be-4736-8861-f1b57e5ce52f -C3L-02958 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02958.filtered.AD.5.noLongINDELS.vcf.gz 7487525 VCF 43cf9e68f5a5add9f0c328af21c46b35 C3L-02958.WXS.N.hg38 41dd256e-e639-42c7-b18f-fbcf3ddf0448 -C3L-02961 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02961.filtered.AD.5.noLongINDELS.vcf.gz 6310003 VCF 4edffe2b868e4236b839ee28f5f17aa3 C3L-02961.WXS.N.hg38 f23ca910-722d-4d32-888e-7c69f63737ad +C3L-02957 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02957.filtered.AD.5.noLongINDELS.vcf.gz 6969353 VCF 55ef42448b34126b85756e7d0727abb7 C3L-02957.WXS.N.hg38 89ea2f30-a1be-4736-8861-f1b57e5ce52f +C3L-02958 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02958.filtered.AD.5.noLongINDELS.vcf.gz 7487525 VCF 43cf9e68f5a5add9f0c328af21c46b35 C3L-02958.WXS.N.hg38 41dd256e-e639-42c7-b18f-fbcf3ddf0448 +C3L-02961 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02961.filtered.AD.5.noLongINDELS.vcf.gz 6310003 VCF 4edffe2b868e4236b839ee28f5f17aa3 C3L-02961.WXS.N.hg38 f23ca910-722d-4d32-888e-7c69f63737ad C3L-02963 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02963.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3L-02963.WXS.N.hg38 7af14987-fede-4019-89a3-30af14f759ba C3L-02963 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02963.filtered.ROI.AD.5.INDELS.NS.vcf.gz 410809 VCF ad37bce7fbb296aa1b9b39ee26b7d9d0 C3L-02963.WXS.N.hg38 7af14987-fede-4019-89a3-30af14f759ba C3L-02963 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02963.filtered.AD.5.noLongINDELS.vcf.gz 3797770 VCF b884496443df029c0f44904778730fe9 C3L-02963.WXS.N.hg38 7af14987-fede-4019-89a3-30af14f759ba C3L-02964 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02964.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3L-02964.WXS.N.hg38 fe1700a9-ae84-45d9-9932-91f0ecd566f7 C3L-02964 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02964.filtered.ROI.AD.5.INDELS.NS.vcf.gz 405333 VCF ca5af085404fd26e194039d808401dcb C3L-02964.WXS.N.hg38 fe1700a9-ae84-45d9-9932-91f0ecd566f7 C3L-02964 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02964.filtered.AD.5.noLongINDELS.vcf.gz 3864352 VCF 93638113b4484d6b085313804817d9c1 C3L-02964.WXS.N.hg38 fe1700a9-ae84-45d9-9932-91f0ecd566f7 -C3L-02967 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02967.filtered.AD.5.noLongINDELS.vcf.gz 6959054 VCF ab195012f6faff61bdd9922358054202 C3L-02967.WXS.N.hg38 8f4a8c80-8bee-45bf-b28f-7e29840c65e6 +C3L-02967 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-02967.filtered.AD.5.noLongINDELS.vcf.gz 6959054 VCF ab195012f6faff61bdd9922358054202 C3L-02967.WXS.N.hg38 8f4a8c80-8bee-45bf-b28f-7e29840c65e6 C3L-02968 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02968.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3L-02968.WXS.N.hg38 45d7684e-34ea-4a8e-8125-1af1b198ce24 C3L-02968 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-02968.filtered.ROI.AD.5.INDELS.NS.vcf.gz 420294 VCF 31948ba7bd3122cf757350d7cb4561c1 C3L-02968.WXS.N.hg38 45d7684e-34ea-4a8e-8125-1af1b198ce24 C3L-02968 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-02968.filtered.AD.5.noLongINDELS.vcf.gz 4064116 VCF f182183b91e1135b0479e12e821cad11 C3L-02968.WXS.N.hg38 45d7684e-34ea-4a8e-8125-1af1b198ce24 @@ -636,11 +636,11 @@ C3L-03129 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_ C3L-03129 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03129.filtered.AD.5.noLongINDELS.vcf.gz 6000387 VCF 730489d033e9f3765c2b272f017c8ee0 C3L-03129.WXS.N.hg38 21d9eb71-8b2e-46fb-8f3b-83f895ec7c3d C3L-03260 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03260.filtered.ROI.AD.5.INDELS.NS.vcf.gz 678881 VCF d7375103ef8758d14757d828599b73d1 C3L-03260.WXS.N.hg38 f43b671d-b7d0-4afb-9492-3f25b9d5995c C3L-03260 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03260.filtered.AD.5.noLongINDELS.vcf.gz 6348996 VCF 454c2550908323b91fea3c65f6fee3e2 C3L-03260.WXS.N.hg38 f43b671d-b7d0-4afb-9492-3f25b9d5995c -C3L-03262 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03262.filtered.AD.5.noLongINDELS.vcf.gz 6201445 VCF 60d9c38e17935936d71f6b420b17e184 C3L-03262.WXS.N.hg38 376a3956-658f-44ec-ba00-fc88fed38ee1 +C3L-03262 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03262.filtered.AD.5.noLongINDELS.vcf.gz 6201445 VCF 60d9c38e17935936d71f6b420b17e184 C3L-03262.WXS.N.hg38 376a3956-658f-44ec-ba00-fc88fed38ee1 C3L-03266 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03266.filtered.ROI.AD.5.INDELS.NS.vcf.gz 684035 VCF 8cbb4e19f0a63d263b5e22dee88cda06 C3L-03266.WXS.N.hg38 655662cf-22cf-4d53-9449-306669ad2d06 C3L-03266 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03266.filtered.AD.5.noLongINDELS.vcf.gz 6052114 VCF 3149adf7c385e123ff856f755c3032b2 C3L-03266.WXS.N.hg38 655662cf-22cf-4d53-9449-306669ad2d06 -C3L-03268 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03268.filtered.AD.5.noLongINDELS.vcf.gz 6617089 VCF d53f133cd70552c3c0a7037145261281 C3L-03268.WXS.N.hg38 07c4ff2f-d0d6-41e6-83d9-6d1da73ca4fb -C3L-03271 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03271.filtered.AD.5.noLongINDELS.vcf.gz 7182500 VCF 93e19ae463a4b39b0668fba41b7cb84e C3L-03271.WXS.N.hg38 e04a60d6-16f7-4194-a160-cec7e0aecf24 +C3L-03268 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03268.filtered.AD.5.noLongINDELS.vcf.gz 6617089 VCF d53f133cd70552c3c0a7037145261281 C3L-03268.WXS.N.hg38 07c4ff2f-d0d6-41e6-83d9-6d1da73ca4fb +C3L-03271 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03271.filtered.AD.5.noLongINDELS.vcf.gz 7182500 VCF 93e19ae463a4b39b0668fba41b7cb84e C3L-03271.WXS.N.hg38 e04a60d6-16f7-4194-a160-cec7e0aecf24 C3L-03272 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03272.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3L-03272.WXS.N.hg38 baf9a640-5ccc-4af5-93b1-e0c0f3d51d97 C3L-03272 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03272.filtered.ROI.AD.5.INDELS.NS.vcf.gz 428296 VCF 8cc6f5cb4cdaa8c9eda786e83ae8bb96 C3L-03272.WXS.N.hg38 baf9a640-5ccc-4af5-93b1-e0c0f3d51d97 C3L-03272 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03272.filtered.AD.5.noLongINDELS.vcf.gz 4457863 VCF 3a677f88f92e7a36a8939dc4311312a5 C3L-03272.WXS.N.hg38 baf9a640-5ccc-4af5-93b1-e0c0f3d51d97 @@ -648,10 +648,10 @@ C3L-03356 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_ C3L-03356 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03356.filtered.AD.5.noLongINDELS.vcf.gz 5802173 VCF dfe1d4388d00f90a8e40e4f1b8fef734 C3L-03356.WXS.N.hg38 bf6fe2a5-f454-42ea-93d0-d11496684867 C3L-03371 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03371.filtered.ROI.AD.5.INDELS.NS.vcf.gz 679114 VCF 0360cc0aa710d4703fabe5f2f9545ddf C3L-03371.WXS.N.hg38 811aeff5-1757-4b26-9ce3-55361cd92d7c C3L-03371 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03371.filtered.AD.5.noLongINDELS.vcf.gz 6615108 VCF 9f92d22ee82d1d73028f25aea4e37b97 C3L-03371.WXS.N.hg38 811aeff5-1757-4b26-9ce3-55361cd92d7c -C3L-03372 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03372.filtered.AD.5.noLongINDELS.vcf.gz 5533243 VCF f968bb21f70743a9dfd809ed5bd2b35f C3L-03372.WXS.N.hg38 232df735-b856-4f31-840a-0e28d746748a +C3L-03372 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03372.filtered.AD.5.noLongINDELS.vcf.gz 5533243 VCF f968bb21f70743a9dfd809ed5bd2b35f C3L-03372.WXS.N.hg38 232df735-b856-4f31-840a-0e28d746748a C3L-03378 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03378.filtered.ROI.AD.5.INDELS.NS.vcf.gz 686212 VCF 2ce6851ce871217bcc7c12330c594b2e C3L-03378.WXS.N.hg38 8a903c70-64d6-4282-8503-3be43feb7c26 C3L-03378 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03378.filtered.AD.5.noLongINDELS.vcf.gz 5661442 VCF 53e5b83fad2eade5b1c3d462711bd8e0 C3L-03378.WXS.N.hg38 8a903c70-64d6-4282-8503-3be43feb7c26 -C3L-03385 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03385.filtered.AD.5.noLongINDELS.vcf.gz 6496122 VCF ee1be216c8fe68156f96d9c7ebc98fd0 C3L-03385.WXS.N.hg38 c5b5aae5-cc1e-4644-87d0-d21324604e2a +C3L-03385 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03385.filtered.AD.5.noLongINDELS.vcf.gz 6496122 VCF ee1be216c8fe68156f96d9c7ebc98fd0 C3L-03385.WXS.N.hg38 c5b5aae5-cc1e-4644-87d0-d21324604e2a C3L-03387 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03387.filtered.ROI.AD.5.INDELS.NS.vcf.gz 678475 VCF 6eb9a7ad3cc711f0b382fdc4ab700a1f C3L-03387.WXS.N.hg38 306b0614-1f42-4115-9a1e-6d69007b0fa4 C3L-03387 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03387.filtered.AD.5.noLongINDELS.vcf.gz 5764464 VCF 6c56ea73ea4fc0cf94db55e7bff4efc8 C3L-03387.WXS.N.hg38 306b0614-1f42-4115-9a1e-6d69007b0fa4 C3L-03388 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03388.filtered.ROI.AD.5.INDELS.NS.vcf.gz 722634 VCF b8e9a71b6a21e1c9fdcf17e8add60581 C3L-03388.WXS.N.hg38 714cb467-bc1e-48f6-98c8-c7f08d14e740 @@ -670,8 +670,8 @@ C3L-03405 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_ C3L-03405 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03405.filtered.AD.5.noLongINDELS.vcf.gz 6516539 VCF ec7ca8b53bc36644d1019b9f358e3a35 C3L-03405.WXS.N.hg38 00aeb77c-ac81-458f-a256-936325fde6ce C3L-03407 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03407.filtered.ROI.AD.5.INDELS.NS.vcf.gz 673905 VCF c30e3adec67cf7da5279ab9b8b8646f7 C3L-03407.WXS.N.hg38 3c489ec2-f590-40dc-b963-c04561e2618b C3L-03407 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03407.filtered.AD.5.noLongINDELS.vcf.gz 5849104 VCF 45d6675bb97f61747d20540028c922cd C3L-03407.WXS.N.hg38 3c489ec2-f590-40dc-b963-c04561e2618b -C3L-03462 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03462.filtered.AD.5.noLongINDELS.vcf.gz 6570446 VCF d91658fbffc563cc960b37ae8b166017 C3L-03462.WXS.N.hg38 ecc7cdc6-0632-4be3-b1a3-e70193029cda -C3L-03463 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03463.filtered.AD.5.noLongINDELS.vcf.gz 7117126 VCF 7d34ce6099572a55330f808ed92bf10a C3L-03463.WXS.N.hg38 671f8fd0-8de5-45e8-889f-480694a1eb6a +C3L-03462 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03462.filtered.AD.5.noLongINDELS.vcf.gz 6570446 VCF d91658fbffc563cc960b37ae8b166017 C3L-03462.WXS.N.hg38 ecc7cdc6-0632-4be3-b1a3-e70193029cda +C3L-03463 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03463.filtered.AD.5.noLongINDELS.vcf.gz 7117126 VCF 7d34ce6099572a55330f808ed92bf10a C3L-03463.WXS.N.hg38 671f8fd0-8de5-45e8-889f-480694a1eb6a C3L-03628 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03628.filtered.ROI.AD.5.INDELS.NS.vcf.gz 701697 VCF 7ef6b6d06c78991b1f2131db1aa5f20c C3L-03628.WXS.N.hg38 dd82c39e-22e0-46eb-a844-2fe349b189ca C3L-03628 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03628.filtered.AD.5.noLongINDELS.vcf.gz 7071916 VCF 93139167bf6893f8a1103866070b0063 C3L-03628.WXS.N.hg38 dd82c39e-22e0-46eb-a844-2fe349b189ca C3L-03630 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03630.filtered.ROI.AD.5.INDELS.NS.vcf.gz 680353 VCF 1780bde02dc216aaefe78f961d5f032f C3L-03630.WXS.N.hg38 a2750cc1-69d9-4ae7-bf41-39aa1bfb8969 @@ -682,22 +682,22 @@ C3L-03635 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_ C3L-03635 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03635.filtered.AD.5.noLongINDELS.vcf.gz 6680829 VCF 834578f4338da0c54d557ff1079e982e C3L-03635.WXS.N.hg38 2dfd2110-1402-4c6f-9f36-51129a20e857 C3L-03639 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03639.filtered.ROI.AD.5.INDELS.NS.vcf.gz 692660 VCF fdb665427fa5cb0de345e11d7d96e8ec C3L-03639.WXS.N.hg38 4bbdb4ea-2f95-447f-8b4d-b885e455be04 C3L-03639 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03639.filtered.AD.5.noLongINDELS.vcf.gz 6478089 VCF 1642c58189e44880776a9cc3970da426 C3L-03639.WXS.N.hg38 4bbdb4ea-2f95-447f-8b4d-b885e455be04 -C3L-03642 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03642.filtered.AD.5.noLongINDELS.vcf.gz 7272373 VCF 26d3eb5a9d6b78e4dacf696e3508f728 C3L-03642.WXS.N.hg38 3bcdcede-39d7-4bd6-987b-a9f617d485c3 +C3L-03642 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03642.filtered.AD.5.noLongINDELS.vcf.gz 7272373 VCF 26d3eb5a9d6b78e4dacf696e3508f728 C3L-03642.WXS.N.hg38 3bcdcede-39d7-4bd6-987b-a9f617d485c3 C3L-03678 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03678.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3L-03678.WXS.N.hg38 26abe382-68a7-49e1-8739-0012eccaaa2c C3L-03678 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03678.filtered.ROI.AD.5.INDELS.NS.vcf.gz 408214 VCF 728384185ffd872a81febb05be21a464 C3L-03678.WXS.N.hg38 26abe382-68a7-49e1-8739-0012eccaaa2c C3L-03678 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03678.filtered.AD.5.noLongINDELS.vcf.gz 4048897 VCF f87ee8bda5102b789717019342193e90 C3L-03678.WXS.N.hg38 26abe382-68a7-49e1-8739-0012eccaaa2c -C3L-03679 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03679.filtered.AD.5.noLongINDELS.vcf.gz 6271793 VCF 61a9b24ef8e9d848d3b6ce28f38860e1 C3L-03679.WXS.N.hg38 211cb316-2675-4b93-a3e6-7c486f2e75bc +C3L-03679 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03679.filtered.AD.5.noLongINDELS.vcf.gz 6271793 VCF 61a9b24ef8e9d848d3b6ce28f38860e1 C3L-03679.WXS.N.hg38 211cb316-2675-4b93-a3e6-7c486f2e75bc C3L-03681 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03681.filtered.ROI.AD.5.INDELS.NS.vcf.gz 692139 VCF cac6ee1e21241be9ffd505d59dddbb78 C3L-03681.WXS.N.hg38 025cd14c-c245-4ff6-8f08-e0c88ca5c078 C3L-03681 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03681.filtered.AD.5.noLongINDELS.vcf.gz 6382429 VCF e3cfd175671614cb23291a1ff24ebc60 C3L-03681.WXS.N.hg38 025cd14c-c245-4ff6-8f08-e0c88ca5c078 -C3L-03717 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03717.filtered.AD.5.noLongINDELS.vcf.gz 7018648 VCF 9a4667ac8e9e020c48fd12dce8eabe57 C3L-03717.WXS.N.hg38 7088bb35-9895-4107-a3cb-f947c133007c -C3L-03721 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03721.filtered.AD.5.noLongINDELS.vcf.gz 6885861 VCF af97964745c0a03c020caab542568aae C3L-03721.WXS.N.hg38 45f3b611-b881-4d78-9aea-316c45564689 -C3L-03726 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03726.filtered.AD.5.noLongINDELS.vcf.gz 6937075 VCF ec2367cde2873ec9b711ee9ef1b1e3d9 C3L-03726.WXS.N.hg38 caee2926-7794-4b90-986d-74d76d8e8ef5 +C3L-03717 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03717.filtered.AD.5.noLongINDELS.vcf.gz 7018648 VCF 9a4667ac8e9e020c48fd12dce8eabe57 C3L-03717.WXS.N.hg38 7088bb35-9895-4107-a3cb-f947c133007c +C3L-03721 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03721.filtered.AD.5.noLongINDELS.vcf.gz 6885861 VCF af97964745c0a03c020caab542568aae C3L-03721.WXS.N.hg38 45f3b611-b881-4d78-9aea-316c45564689 +C3L-03726 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03726.filtered.AD.5.noLongINDELS.vcf.gz 6937075 VCF ec2367cde2873ec9b711ee9ef1b1e3d9 C3L-03726.WXS.N.hg38 caee2926-7794-4b90-986d-74d76d8e8ef5 C3L-03727 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03727.filtered.ROI.AD.5.INDELS.NS.vcf.gz 676884 VCF 8a6dd070e09c212cef314e43e0f8e07b C3L-03727.WXS.N.hg38 3783f164-e889-434f-ace0-a02ab7f52081 C3L-03727 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03727.filtered.AD.5.noLongINDELS.vcf.gz 6411882 VCF 5b60bf1c5bd7495f9187eaba5db41083 C3L-03727.WXS.N.hg38 3783f164-e889-434f-ace0-a02ab7f52081 C3L-03728 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03728.filtered.ROI.AD.5.INDELS.NS.vcf.gz 696083 VCF 8fb6e52a2ad6ffbd17cd0c17bc8ca4c9 C3L-03728.WXS.N.hg38 c97ebe61-c87c-4ff6-9294-24d4b65d7d42 C3L-03728 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03728.filtered.AD.5.noLongINDELS.vcf.gz 6662860 VCF fab2737cee7190168ccad743f7f2ee16 C3L-03728.WXS.N.hg38 c97ebe61-c87c-4ff6-9294-24d4b65d7d42 -C3L-03735 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03735.filtered.AD.5.noLongINDELS.vcf.gz 6553015 VCF 7d77d29c61cf872a98a7048b9b46b1b4 C3L-03735.WXS.N.hg38 e3e2c432-ec42-4d5c-848b-f53a31f5b494 -C3L-03740 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03740.filtered.AD.5.noLongINDELS.vcf.gz 6520337 VCF 08352573d6141a9e61b47b71a85b2fd6 C3L-03740.WXS.N.hg38 b3bbcc78-a7c4-4c55-99f3-829d3d394087 +C3L-03735 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03735.filtered.AD.5.noLongINDELS.vcf.gz 6553015 VCF 7d77d29c61cf872a98a7048b9b46b1b4 C3L-03735.WXS.N.hg38 e3e2c432-ec42-4d5c-848b-f53a31f5b494 +C3L-03740 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03740.filtered.AD.5.noLongINDELS.vcf.gz 6520337 VCF 08352573d6141a9e61b47b71a85b2fd6 C3L-03740.WXS.N.hg38 b3bbcc78-a7c4-4c55-99f3-829d3d394087 C3L-03743 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03743.filtered.ROI.AD.5.INDELS.NS.vcf.gz 684155 VCF 066ee0ec7bffb25641726971779bb3b7 C3L-03743.WXS.N.hg38 26620c71-1c71-4a22-9fbd-184e12a51cc8 C3L-03743 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03743.filtered.AD.5.noLongINDELS.vcf.gz 6289480 VCF 8be3df8c6f9da0ef67b9300296c77056 C3L-03743.WXS.N.hg38 26620c71-1c71-4a22-9fbd-184e12a51cc8 C3L-03744 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03744.filtered.ROI.AD.5.INDELS.NS.vcf.gz 680707 VCF fe56985a5b9169469804ff3608db1b1f C3L-03744.WXS.N.hg38 f068a4d6-f1c5-45bd-800d-d234245fcb1d @@ -718,10 +718,10 @@ C3L-03965 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_W C3L-03965 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03965.filtered.AD.5.noLongINDELS.vcf.gz 5511027 VCF 792dc5ca82df1db408adf3d6602e22ec C3L-03965.WXS.N.hg38 1b195337-628b-4637-9c1d-f36d99df8e98 C3L-03968 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-03968.filtered.ROI.AD.5.INDELS.NS.vcf.gz 698407 VCF 0bb20e213d8c3f4941cbafbc90cb655a C3L-03968.WXS.N.hg38 b8b7a741-d303-4b90-a138-639e9f89cede C3L-03968 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-03968.filtered.AD.5.noLongINDELS.vcf.gz 6693776 VCF 5b99b06646ebfe62623764337ab6cfa1 C3L-03968.WXS.N.hg38 b8b7a741-d303-4b90-a138-639e9f89cede -C3L-03969 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03969.filtered.AD.5.noLongINDELS.vcf.gz 6623588 VCF f8d9a84d330f8e21a720c70bf0808972 C3L-03969.WXS.N.hg38 a403cc1f-05da-41a6-abd2-d963b7c5c058 -C3L-03976 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03976.filtered.AD.5.noLongINDELS.vcf.gz 7259268 VCF 15f08ca2b3bf2b33be21a5aa1ed6cea6 C3L-03976.WXS.N.hg38 068c9af6-50cb-41b2-a2d9-0b32c030a383 -C3L-03984 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03984.filtered.AD.5.noLongINDELS.vcf.gz 6866360 VCF 24af25a894daa8ed1e70b5f102978266 C3L-03984.WXS.N.hg38 c5aeb319-af76-443a-b5bb-a567c314638f -C3L-03985 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03985.filtered.AD.5.noLongINDELS.vcf.gz 6752133 VCF 04125fe7216367d211f8a017f33b110c C3L-03985.WXS.N.hg38 ab390407-839f-4c7f-8521-22d845feb009 +C3L-03969 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03969.filtered.AD.5.noLongINDELS.vcf.gz 6623588 VCF f8d9a84d330f8e21a720c70bf0808972 C3L-03969.WXS.N.hg38 a403cc1f-05da-41a6-abd2-d963b7c5c058 +C3L-03976 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03976.filtered.AD.5.noLongINDELS.vcf.gz 7259268 VCF 15f08ca2b3bf2b33be21a5aa1ed6cea6 C3L-03976.WXS.N.hg38 068c9af6-50cb-41b2-a2d9-0b32c030a383 +C3L-03984 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03984.filtered.AD.5.noLongINDELS.vcf.gz 6866360 VCF 24af25a894daa8ed1e70b5f102978266 C3L-03984.WXS.N.hg38 c5aeb319-af76-443a-b5bb-a567c314638f +C3L-03985 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-03985.filtered.AD.5.noLongINDELS.vcf.gz 6752133 VCF 04125fe7216367d211f8a017f33b110c C3L-03985.WXS.N.hg38 ab390407-839f-4c7f-8521-22d845feb009 C3L-04013 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-04013.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3L-04013.WXS.N.hg38 79babf82-0500-4b82-b76d-81919961bc8f C3L-04013 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-04013.filtered.ROI.AD.5.INDELS.NS.vcf.gz 410768 VCF dda82a06ce70841d459a2e2f01955527 C3L-04013.WXS.N.hg38 79babf82-0500-4b82-b76d-81919961bc8f C3L-04013 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-04013.filtered.AD.5.noLongINDELS.vcf.gz 3551568 VCF 832a130a2b832b5e095cd3306e3927d6 C3L-04013.WXS.N.hg38 79babf82-0500-4b82-b76d-81919961bc8f @@ -732,12 +732,12 @@ C3L-04025 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSC C3L-04025 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-04025.filtered.AD.5.noLongINDELS.vcf.gz 7005491 VCF 302f02b0a5590c0ba80522964253a7d5 C3L-04025.WXS.N.hg38 34b61581-e961-468f-98de-0303f9b1735c C3L-04027 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-04027.filtered.ROI.AD.5.INDELS.NS.vcf.gz 685457 VCF 727361a59bfc709ed851a8a9b04d2b8b C3L-04027.WXS.N.hg38 8f3b10aa-b7e2-4644-a404-d794bfa5df85 C3L-04027 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-04027.filtered.AD.5.noLongINDELS.vcf.gz 7028142 VCF ba57bf77805f100c60fea54a609f5606 C3L-04027.WXS.N.hg38 8f3b10aa-b7e2-4644-a404-d794bfa5df85 -C3L-04031 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04031.filtered.AD.5.noLongINDELS.vcf.gz 7602902 VCF 25021d9cfb12b4f04d6f786358261ba8 C3L-04031.WXS.N.hg38 d052c89e-3678-4cfd-b6f9-a24b02981807 -C3L-04033 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04033.filtered.AD.5.noLongINDELS.vcf.gz 6953182 VCF d758ced228650b496b69cf62d9c2dd2c C3L-04033.WXS.N.hg38 ebc08f52-ea73-4d4d-a6b5-5ad7099aa91c -C3L-04036 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04036.filtered.AD.5.noLongINDELS.vcf.gz 6198571 VCF 11007ea09f1c1fff1a637909e489308c C3L-04036.WXS.N.hg38 af95917f-66d4-4f45-a029-744682ad5cfd -C3L-04037 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04037.filtered.AD.5.noLongINDELS.vcf.gz 8726751 VCF c2ea92bc1698388e2721b9769c72c8b2 C3L-04037.WXS.N.hg38 875d94fc-56c9-464a-b2c5-ae1fda9beddd -C3L-04038 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04038.filtered.AD.5.noLongINDELS.vcf.gz 6532075 VCF 85657e746ac0acf2057e5831a9a406d0 C3L-04038.WXS.N.hg38 d68ef551-045b-4c28-991c-54176b2ef8b2 -C3L-04040 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04040.filtered.AD.5.noLongINDELS.vcf.gz 6950104 VCF c008b1b5a039e84e6a64ffb53894fcd5 C3L-04040.WXS.N.hg38 c3663e14-867c-437c-8f19-6006b7f20f17 +C3L-04031 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04031.filtered.AD.5.noLongINDELS.vcf.gz 7602902 VCF 25021d9cfb12b4f04d6f786358261ba8 C3L-04031.WXS.N.hg38 d052c89e-3678-4cfd-b6f9-a24b02981807 +C3L-04033 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04033.filtered.AD.5.noLongINDELS.vcf.gz 6953182 VCF d758ced228650b496b69cf62d9c2dd2c C3L-04033.WXS.N.hg38 ebc08f52-ea73-4d4d-a6b5-5ad7099aa91c +C3L-04036 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04036.filtered.AD.5.noLongINDELS.vcf.gz 6198571 VCF 11007ea09f1c1fff1a637909e489308c C3L-04036.WXS.N.hg38 af95917f-66d4-4f45-a029-744682ad5cfd +C3L-04037 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04037.filtered.AD.5.noLongINDELS.vcf.gz 8726751 VCF c2ea92bc1698388e2721b9769c72c8b2 C3L-04037.WXS.N.hg38 875d94fc-56c9-464a-b2c5-ae1fda9beddd +C3L-04038 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04038.filtered.AD.5.noLongINDELS.vcf.gz 6532075 VCF 85657e746ac0acf2057e5831a9a406d0 C3L-04038.WXS.N.hg38 d68ef551-045b-4c28-991c-54176b2ef8b2 +C3L-04040 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04040.filtered.AD.5.noLongINDELS.vcf.gz 6950104 VCF c008b1b5a039e84e6a64ffb53894fcd5 C3L-04040.WXS.N.hg38 c3663e14-867c-437c-8f19-6006b7f20f17 C3L-04071 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-04071.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3L-04071.WXS.N.hg38 e401f9d3-e7dd-4353-be52-a003345619c2 C3L-04071 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-04071.filtered.ROI.AD.5.INDELS.NS.vcf.gz 414653 VCF 75f5338c7869bb3f9a020cf93e31b69e C3L-04071.WXS.N.hg38 e401f9d3-e7dd-4353-be52-a003345619c2 C3L-04071 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-04071.filtered.AD.5.noLongINDELS.vcf.gz 3848090 VCF 269273b72fe26817a5b6564619e0b718 C3L-04071.WXS.N.hg38 e401f9d3-e7dd-4353-be52-a003345619c2 @@ -745,18 +745,18 @@ C3L-04072 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_ C3L-04072 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-04072.filtered.AD.5.noLongINDELS.vcf.gz 8026828 VCF f7123029b6e19f4438bf8002ac1c158c C3L-04072.WXS.N.hg38 56b9afe1-7dd1-4c3a-9c27-93967e2aa4b6 C3L-04080 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-04080.filtered.ROI.AD.5.INDELS.NS.vcf.gz 687414 VCF 3bb60dd7693380ca5f207769b3fe7a0e C3L-04080.WXS.N.hg38 fc949e80-7df5-4e0f-9f54-de1f5e5fe540 C3L-04080 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-04080.filtered.AD.5.noLongINDELS.vcf.gz 6481139 VCF 09339c969ed95223b44566979d5d7df9 C3L-04080.WXS.N.hg38 fc949e80-7df5-4e0f-9f54-de1f5e5fe540 -C3L-04082 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04082.filtered.AD.5.noLongINDELS.vcf.gz 8045982 VCF 373c79271bece3701e9e8ef07ca25cdf C3L-04082.WXS.N.hg38 5d9f84bd-a6e9-4678-99b9-b92e116bd990 -C3L-04083 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04083.filtered.AD.5.noLongINDELS.vcf.gz 5620036 VCF f4c7a342e038fb042f9304d92b06c868 C3L-04083.WXS.N.hg38 cc4f43a8-3da1-4df6-94d3-48d461e679a2 +C3L-04082 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04082.filtered.AD.5.noLongINDELS.vcf.gz 8045982 VCF 373c79271bece3701e9e8ef07ca25cdf C3L-04082.WXS.N.hg38 5d9f84bd-a6e9-4678-99b9-b92e116bd990 +C3L-04083 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04083.filtered.AD.5.noLongINDELS.vcf.gz 5620036 VCF f4c7a342e038fb042f9304d92b06c868 C3L-04083.WXS.N.hg38 cc4f43a8-3da1-4df6-94d3-48d461e679a2 C3L-04084 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-04084.filtered.ROI.AD.5.INDELS.NS.vcf.gz 692664 VCF 12fc5712fe0c8a11423daa9d952c3a89 C3L-04084.WXS.N.hg38 34b6e37f-77df-4184-a9fe-f4b498986b51 C3L-04084 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-04084.filtered.AD.5.noLongINDELS.vcf.gz 6666458 VCF 5542ecdbd465e9bd073e175e31668c46 C3L-04084.WXS.N.hg38 34b6e37f-77df-4184-a9fe-f4b498986b51 -C3L-04090 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04090.filtered.AD.5.noLongINDELS.vcf.gz 6595611 VCF 6862aa40e29e6a3a28bfd66a6a613c3d C3L-04090.WXS.N.hg38 cb068c31-d894-43ba-b308-3b1f97d8c15e -C3L-04213 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04213.filtered.AD.5.noLongINDELS.vcf.gz 6274390 VCF 425f7c3601f36eff80f10bef8aa62e74 C3L-04213.WXS.N.hg38 3cc11d4a-5a91-438c-9143-57a046ea5a10 -C3L-04339 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04339.filtered.AD.5.noLongINDELS.vcf.gz 6068489 VCF 576fcefd7bbc2f29bc8fb7a9b89d5a41 C3L-04339.WXS.N.hg38 210f66ea-881d-49ae-b32c-3d39ddac7941 +C3L-04090 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04090.filtered.AD.5.noLongINDELS.vcf.gz 6595611 VCF 6862aa40e29e6a3a28bfd66a6a613c3d C3L-04090.WXS.N.hg38 cb068c31-d894-43ba-b308-3b1f97d8c15e +C3L-04213 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04213.filtered.AD.5.noLongINDELS.vcf.gz 6274390 VCF 425f7c3601f36eff80f10bef8aa62e74 C3L-04213.WXS.N.hg38 3cc11d4a-5a91-438c-9143-57a046ea5a10 +C3L-04339 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04339.filtered.AD.5.noLongINDELS.vcf.gz 6068489 VCF 576fcefd7bbc2f29bc8fb7a9b89d5a41 C3L-04339.WXS.N.hg38 210f66ea-881d-49ae-b32c-3d39ddac7941 C3L-04354 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-04354.filtered.ROI.AD.5.INDELS.NS.vcf.gz 678959 VCF 2b4f7be65781051208fe47e9cbec69c7 C3L-04354.WXS.N.hg38 1a7fe815-6001-4550-b337-5883804884d4 C3L-04354 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-04354.filtered.AD.5.noLongINDELS.vcf.gz 6044451 VCF c49c60f823ee0108323e4435dfe420f1 C3L-04354.WXS.N.hg38 1a7fe815-6001-4550-b337-5883804884d4 -C3L-04359 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04359.filtered.AD.5.noLongINDELS.vcf.gz 6835172 VCF c7f8751e761475ad43cbdd95ec7e5779 C3L-04359.WXS.N.hg38 0a9ab409-f15c-49f9-b566-0c21bbedb03d -C3L-04362 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04362.filtered.AD.5.noLongINDELS.vcf.gz 6825870 VCF 5523bd358cf5864bda3342655b37e83e C3L-04362.WXS.N.hg38 39a56545-fb06-4f46-bec5-44025a89bc72 -C3L-04365 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04365.filtered.AD.5.noLongINDELS.vcf.gz 6668055 VCF b056a89f8b4e795b7cce7875763d787d C3L-04365.WXS.N.hg38 be1595fb-3fd7-44a8-9815-95f1278bd10f +C3L-04359 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04359.filtered.AD.5.noLongINDELS.vcf.gz 6835172 VCF c7f8751e761475ad43cbdd95ec7e5779 C3L-04359.WXS.N.hg38 0a9ab409-f15c-49f9-b566-0c21bbedb03d +C3L-04362 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04362.filtered.AD.5.noLongINDELS.vcf.gz 6825870 VCF 5523bd358cf5864bda3342655b37e83e C3L-04362.WXS.N.hg38 39a56545-fb06-4f46-bec5-44025a89bc72 +C3L-04365 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04365.filtered.AD.5.noLongINDELS.vcf.gz 6668055 VCF b056a89f8b4e795b7cce7875763d787d C3L-04365.WXS.N.hg38 be1595fb-3fd7-44a8-9815-95f1278bd10f C3L-04391 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-04391.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3L-04391.WXS.N.hg38 fa19091c-05eb-40a3-8a34-08b810ae7475 C3L-04391 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-04391.filtered.ROI.AD.5.INDELS.NS.vcf.gz 417365 VCF f93382958ce5d739b878e8424077a19a C3L-04391.WXS.N.hg38 fa19091c-05eb-40a3-8a34-08b810ae7475 C3L-04391 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-04391.filtered.AD.5.noLongINDELS.vcf.gz 4134714 VCF 45d505ad4c1b3ae63d52769f6b4b7de2 C3L-04391.WXS.N.hg38 fa19091c-05eb-40a3-8a34-08b810ae7475 @@ -768,14 +768,14 @@ C3L-04479 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_ C3L-04479 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-04479.filtered.AD.5.noLongINDELS.vcf.gz 7339841 VCF 6c4657ca2b1373a4e618a4e440393bee C3L-04479.WXS.N.hg38 cc12df9a-deba-436f-87a4-b924e725c1ee C3L-04495 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-04495.filtered.ROI.AD.5.INDELS.NS.vcf.gz 712917 VCF 5ef2b14026cc807917e63782a79613e3 C3L-04495.WXS.N.hg38 19d20b8d-942f-4e2d-8084-e9e4d00175f8 C3L-04495 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-04495.filtered.AD.5.noLongINDELS.vcf.gz 7473101 VCF d06631903c441bc2031f30907403c109 C3L-04495.WXS.N.hg38 19d20b8d-942f-4e2d-8084-e9e4d00175f8 -C3L-04537 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04537.filtered.AD.5.noLongINDELS.vcf.gz 5678723 VCF 7f1016d35ed36dacf9c2bc2a3056cd09 C3L-04537.WXS.N.hg38 84320c1f-226b-431c-8240-fe28ad4a4894 -C3L-04539 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04539.filtered.AD.5.noLongINDELS.vcf.gz 5979597 VCF ca20f87e2b02b6fe5a16d42229ec8dee C3L-04539.WXS.N.hg38 5b6bf6d8-1ba8-40f2-b72c-7209488eb46d -C3L-04731 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04731.filtered.AD.5.noLongINDELS.vcf.gz 7494721 VCF 1711cac2b2b3cbc489f643a0e41192ba C3L-04731.WXS.N.hg38 1fbd34a9-fc9d-4c2c-ba3b-96ffed456256 -C3L-04757 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04757.filtered.AD.5.noLongINDELS.vcf.gz 7413769 VCF fb315db1e78b14e06578a53d392a32aa C3L-04757.WXS.N.hg38 73164e58-3cba-4a7a-a6ab-a37395c5ebe4 -C3L-04759 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04759.filtered.AD.5.noLongINDELS.vcf.gz 5905476 VCF b3892d2b60e4f89652282661a137fedf C3L-04759.WXS.N.hg38 857d5e77-fb80-45a8-86d5-b2e15ae3f8ea +C3L-04537 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04537.filtered.AD.5.noLongINDELS.vcf.gz 5678723 VCF 7f1016d35ed36dacf9c2bc2a3056cd09 C3L-04537.WXS.N.hg38 84320c1f-226b-431c-8240-fe28ad4a4894 +C3L-04539 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04539.filtered.AD.5.noLongINDELS.vcf.gz 5979597 VCF ca20f87e2b02b6fe5a16d42229ec8dee C3L-04539.WXS.N.hg38 5b6bf6d8-1ba8-40f2-b72c-7209488eb46d +C3L-04731 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04731.filtered.AD.5.noLongINDELS.vcf.gz 7494721 VCF 1711cac2b2b3cbc489f643a0e41192ba C3L-04731.WXS.N.hg38 1fbd34a9-fc9d-4c2c-ba3b-96ffed456256 +C3L-04757 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04757.filtered.AD.5.noLongINDELS.vcf.gz 7413769 VCF fb315db1e78b14e06578a53d392a32aa C3L-04757.WXS.N.hg38 73164e58-3cba-4a7a-a6ab-a37395c5ebe4 +C3L-04759 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04759.filtered.AD.5.noLongINDELS.vcf.gz 5905476 VCF b3892d2b60e4f89652282661a137fedf C3L-04759.WXS.N.hg38 857d5e77-fb80-45a8-86d5-b2e15ae3f8ea C3L-04791 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-04791.filtered.ROI.AD.5.INDELS.NS.vcf.gz 688360 VCF 963060d78cf3debb83dfb79d67e817d5 C3L-04791.WXS.N.hg38 b9bd40ed-4000-4486-9101-a8c417b881eb C3L-04791 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-04791.filtered.AD.5.noLongINDELS.vcf.gz 6177530 VCF 1c8b6be1a13f78210d042ac3bc4ac01b C3L-04791.WXS.N.hg38 b9bd40ed-4000-4486-9101-a8c417b881eb -C3L-04795 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04795.filtered.AD.5.noLongINDELS.vcf.gz 6796837 VCF c88c41f0797d2ee66612a8eb800c9572 C3L-04795.WXS.N.hg38 bba78a37-3fd2-4f10-bd89-b298362fed0e +C3L-04795 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3L-04795.filtered.AD.5.noLongINDELS.vcf.gz 6796837 VCF c88c41f0797d2ee66612a8eb800c9572 C3L-04795.WXS.N.hg38 bba78a37-3fd2-4f10-bd89-b298362fed0e C3L-04844 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-04844.filtered.ROI.AD.5.INDELS.NS.vcf.gz 685738 VCF 8a57cbda2f62f85a14c447ac444bfca9 C3L-04844.WXS.N.hg38 2b72ad7c-f5eb-4d4d-84dc-21d7da20105f C3L-04844 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3L-04844.filtered.AD.5.noLongINDELS.vcf.gz 6752211 VCF f9b3c00a47048401d5336ed0e5fe4ec0 C3L-04844.WXS.N.hg38 2b72ad7c-f5eb-4d4d-84dc-21d7da20105f C3L-04848 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3L-04848.filtered.ROI.AD.5.INDELS.NS.vcf.gz 684125 VCF cf632f56cabf027b26dd52801af0ee37 C3L-04848.WXS.N.hg38 10fbded9-2f0a-4fbb-82d8-2e529947d74d @@ -951,7 +951,7 @@ C3N-00518 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS C3N-00519 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-00519.filtered.ROI.AD.5.INDELS.NS.vcf.gz 684518 VCF 3de8522425c9911f784f6aed678aa50f C3N-00519.WXS.N.hg38 0c6a1da0-3bab-402c-9b78-6b51ba514451 C3N-00519 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-00519.filtered.AD.5.noLongINDELS.vcf.gz 6602603 VCF f2fbd6e56d5e66b41b7e3d32632873a9 C3N-00519.WXS.N.hg38 0c6a1da0-3bab-402c-9b78-6b51ba514451 C3N-00545 LUAD WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-00545.filtered.ROI.AD.5.INDELS.NS.vcf.gz 650651 VCF 27a26bcbbf03fdec19496378be8b88f3 C3N-00545.WXS.N.hg38 2ac6cf26-7fa7-460f-a31e-3646f7b0f241 -C3N-00545 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-00545.filtered.AD.5.noLongINDELS.vcf.gz 6172701 VCF d51f6b34f8235340815f634fc458759f C3N-00545.WXS.N.hg38 2ac6cf26-7fa7-460f-a31e-3646f7b0f241 +C3N-00545 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-00545.filtered.AD.5.noLongINDELS.vcf.gz 6172701 VCF d51f6b34f8235340815f634fc458759f C3N-00545.WXS.N.hg38 2ac6cf26-7fa7-460f-a31e-3646f7b0f241 C3N-00545 LUAD WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-00545.filtered.AD.5.noLongINDELS.vcf.gz 6169354 VCF 601d4450a8beef554d12bc145e884670 C3N-00545.WXS.N.hg38 2ac6cf26-7fa7-460f-a31e-3646f7b0f241 C3N-00546 LUAD WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-00546.filtered.ROI.AD.5.INDELS.NS.vcf.gz 681066 VCF 0458a96c21b05ae44f3db449f371cc9e C3N-00546.WXS.N.hg38 f25758fa-258a-4762-89a2-67e07e7ffde9 C3N-00546 LUAD WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-00546.filtered.AD.5.noLongINDELS.vcf.gz 6985690 VCF a6d09422d7506866211ae89bedbf5d8b C3N-00546.WXS.N.hg38 f25758fa-258a-4762-89a2-67e07e7ffde9 @@ -1193,8 +1193,8 @@ C3N-01415 LUAD WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_W C3N-01415 LUAD WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-01415.filtered.AD.5.noLongINDELS.vcf.gz 10137166 VCF 1f7e9208d2f786dc7926a5660bed6b41 C3N-01415.WXS.N.hg38 44ea40a7-a4b2-4a8e-969d-c1d477bc5647 C3N-01416 LUAD WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-01416.filtered.ROI.AD.5.INDELS.NS.vcf.gz 693005 VCF c2ef0ce2543071d0e745951b591d0c58 C3N-01416.WXS.N.hg38 ac7071e8-a335-4ba0-bfc3-5ffcd12334bc C3N-01416 LUAD WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-01416.filtered.AD.5.noLongINDELS.vcf.gz 8119849 VCF ab5e2e978a57f58e3d74ded1d00c6fdb C3N-01416.WXS.N.hg38 ac7071e8-a335-4ba0-bfc3-5ffcd12334bc -C3N-01417 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-01417.filtered.AD.5.noLongINDELS.vcf.gz 6255388 VCF 1e0df613ab6ee881e5bea50dfa40fcf7 C3N-01417.WXS.N.hg38 b0e55d39-f823-42a5-a1dc-6be52fdb54eb -C3N-01419 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-01419.filtered.AD.5.noLongINDELS.vcf.gz 5246800 VCF cee3a54594ffc1cc4097772b91d514df C3N-01419.WXS.N.hg38 7bad8534-983e-4be5-95ac-1b2c6a264267 +C3N-01417 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-01417.filtered.AD.5.noLongINDELS.vcf.gz 6255388 VCF 1e0df613ab6ee881e5bea50dfa40fcf7 C3N-01417.WXS.N.hg38 b0e55d39-f823-42a5-a1dc-6be52fdb54eb +C3N-01419 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-01419.filtered.AD.5.noLongINDELS.vcf.gz 5246800 VCF cee3a54594ffc1cc4097772b91d514df C3N-01419.WXS.N.hg38 7bad8534-983e-4be5-95ac-1b2c6a264267 C3N-01488 LUAD WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-01488.filtered.ROI.AD.5.INDELS.NS.vcf.gz 713070 VCF efb94b1498396b4b1220f5d9e624e309 C3N-01488.WXS.N.hg38 74c4ed65-5d3c-47d2-acde-3de56c7cd361 C3N-01488 LUAD WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-01488.filtered.AD.5.noLongINDELS.vcf.gz 9478028 VCF fde0ab2e84dea3d184642a9717d49990 C3N-01488.WXS.N.hg38 74c4ed65-5d3c-47d2-acde-3de56c7cd361 C3N-01489 LUAD WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-01489.filtered.ROI.AD.5.INDELS.NS.vcf.gz 701813 VCF 3c22bfc985b99c138796ec86fc5bf767 C3N-01489.WXS.N.hg38 c5a6d394-659c-43cf-8b4f-e7d637d4430e @@ -1280,7 +1280,7 @@ C3N-01842 LUAD WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_ C3N-01846 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-01846.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-01846.WXS.N.hg38 6fd023ee-ac38-43b3-a65a-8b56f0a445ac C3N-01846 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-01846.filtered.ROI.AD.5.INDELS.NS.vcf.gz 403975 VCF c0cdc22921ac5a33841b7a7a09f6bedf C3N-01846.WXS.N.hg38 6fd023ee-ac38-43b3-a65a-8b56f0a445ac C3N-01846 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-01846.filtered.AD.5.noLongINDELS.vcf.gz 4093194 VCF 58f44f2f9c873d1676dfdd9a9aae7b0a C3N-01846.WXS.N.hg38 6fd023ee-ac38-43b3-a65a-8b56f0a445ac -C3N-01849 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-01849.filtered.AD.5.noLongINDELS.vcf.gz 6653900 VCF 5a5cb477d2ccde0cbd923f06b5fc344b C3N-01849.WXS.N.hg38 f5f45a87-326b-47a8-b39c-0efb79094bd5 +C3N-01849 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-01849.filtered.AD.5.noLongINDELS.vcf.gz 6653900 VCF 5a5cb477d2ccde0cbd923f06b5fc344b C3N-01849.WXS.N.hg38 f5f45a87-326b-47a8-b39c-0efb79094bd5 C3N-01851 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-01851.filtered.ROI.AD.5.INDELS.NS.vcf.gz 693743 VCF 37efa027a72b2fe32761b10b324491af C3N-01851.WXS.N.hg38 9326193e-0254-4a7e-bbce-b07d8801aa7e C3N-01851 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-01851.filtered.AD.5.noLongINDELS.vcf.gz 6536256 VCF cc9190b8e37ed398f0227dded6cafd51 C3N-01851.WXS.N.hg38 9326193e-0254-4a7e-bbce-b07d8801aa7e C3N-01852 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-01852.filtered.ROI.AD.5.INDELS.NS.vcf.gz 683968 VCF 8d945b0e62230c1a5485464e68e12e2d C3N-01852.WXS.N.hg38 089209aa-c35f-4738-8a0b-87c5873224f5 @@ -1333,14 +1333,14 @@ C3N-02087 LUAD WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_W C3N-02087 LUAD WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02087.filtered.AD.5.noLongINDELS.vcf.gz 6902297 VCF c93b3b2de253559e646cc0c75669d393 C3N-02087.WXS.N.hg38 f70ab7b9-7cdd-4d6a-bf94-2aa639167281 C3N-02089 LUAD WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02089.filtered.ROI.AD.5.INDELS.NS.vcf.gz 691708 VCF 6b59fa2ae41403586f4dbac17ae51adc C3N-02089.WXS.N.hg38 9efddfc1-9d19-4892-a8ee-21bd626507cf C3N-02089 LUAD WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02089.filtered.AD.5.noLongINDELS.vcf.gz 7506661 VCF 4f75e7fd9c790a1df40e2ea6b2a1e400 C3N-02089.WXS.N.hg38 9efddfc1-9d19-4892-a8ee-21bd626507cf -C3N-02143 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02143.filtered.AD.5.noLongINDELS.vcf.gz 6741542 VCF d7b5c3336c16f3bd72545b2cc583b624 C3N-02143.WXS.N.hg38 fa3e3c90-31ee-4bdd-9bb5-0528924387d7 -C3N-02144 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02144.filtered.AD.5.noLongINDELS.vcf.gz 6382275 VCF 55437759677bebf648207c5c744c7205 C3N-02144.WXS.N.hg38 4bd492f5-2f8b-440e-ab46-f4fcc48454ab +C3N-02143 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02143.filtered.AD.5.noLongINDELS.vcf.gz 6741542 VCF d7b5c3336c16f3bd72545b2cc583b624 C3N-02143.WXS.N.hg38 fa3e3c90-31ee-4bdd-9bb5-0528924387d7 +C3N-02144 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02144.filtered.AD.5.noLongINDELS.vcf.gz 6382275 VCF 55437759677bebf648207c5c744c7205 C3N-02144.WXS.N.hg38 4bd492f5-2f8b-440e-ab46-f4fcc48454ab C3N-02145 LUAD WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02145.filtered.ROI.AD.5.INDELS.NS.vcf.gz 714143 VCF 6fcf5e28d9023647698d51315e697786 C3N-02145.WXS.N.hg38 08f29362-1f2b-4678-839d-cebfa79689a7 C3N-02145 LUAD WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02145.filtered.AD.5.noLongINDELS.vcf.gz 10260470 VCF ec1cebe165a041ea355100f740c8c13a C3N-02145.WXS.N.hg38 08f29362-1f2b-4678-839d-cebfa79689a7 -C3N-02146 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02146.filtered.AD.5.noLongINDELS.vcf.gz 8065312 VCF 3bc0bcc56a37836045e1d7a96311993c C3N-02146.WXS.N.hg38 4cca5445-c281-4e6e-8d38-558b87dcf955 +C3N-02146 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02146.filtered.AD.5.noLongINDELS.vcf.gz 8065312 VCF 3bc0bcc56a37836045e1d7a96311993c C3N-02146.WXS.N.hg38 4cca5445-c281-4e6e-8d38-558b87dcf955 C3N-02149 LUAD WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02149.filtered.ROI.AD.5.INDELS.NS.vcf.gz 699238 VCF 9ba1a045b109ce7630c0444117d742b3 C3N-02149.WXS.N.hg38 5f9fee87-fcca-4efd-8730-ff6038ce26aa C3N-02149 LUAD WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02149.filtered.AD.5.noLongINDELS.vcf.gz 9325808 VCF 85a5f970d1bebef3f7d916ffc998eeb6 C3N-02149.WXS.N.hg38 5f9fee87-fcca-4efd-8730-ff6038ce26aa -C3N-02152 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02152.filtered.AD.5.noLongINDELS.vcf.gz 6432286 VCF 3525e1a755779bcec5f7903f277c8fe7 C3N-02152.WXS.N.hg38 27bb1cf0-397e-405c-902a-f93d89869172 +C3N-02152 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02152.filtered.AD.5.noLongINDELS.vcf.gz 6432286 VCF 3525e1a755779bcec5f7903f277c8fe7 C3N-02152.WXS.N.hg38 27bb1cf0-397e-405c-902a-f93d89869172 C3N-02155 LUAD WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02155.filtered.ROI.AD.5.INDELS.NS.vcf.gz 690315 VCF 70749e254fba0b80ffbeb1b4738540a2 C3N-02155.WXS.N.hg38 40a3338b-9fb7-4e8b-8837-16607de5f635 C3N-02155 LUAD WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02155.filtered.AD.5.noLongINDELS.vcf.gz 8772241 VCF 49d2fa1255a885a47db3797f32a0ae19 C3N-02155.WXS.N.hg38 40a3338b-9fb7-4e8b-8837-16607de5f635 C3N-02158 LUAD WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02158.filtered.ROI.AD.5.INDELS.NS.vcf.gz 670851 VCF dbb6ef3649c9fc8a91de77a0cc77bd95 C3N-02158.WXS.N.hg38 c67d4ccc-db44-4a28-850d-a4574f4de5d6 @@ -1357,13 +1357,13 @@ C3N-02188 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_ C3N-02188 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02188.filtered.AD.5.noLongINDELS.vcf.gz 7912114 VCF 69cbddc3317d1b7565376110275f2b2d C3N-02188.WXS.N.hg38 f77f167d-8369-4d86-98af-5ffe055d2236 C3N-02190 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02190.filtered.ROI.AD.5.INDELS.NS.vcf.gz 699670 VCF 37763629ef8b652bfd1e5ff53e7cf771 C3N-02190.WXS.N.hg38 5421f53d-3c45-4318-a4e0-958472e6f850 C3N-02190 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02190.filtered.AD.5.noLongINDELS.vcf.gz 6924369 VCF 2de153efd82f343b0c39d14188858a65 C3N-02190.WXS.N.hg38 5421f53d-3c45-4318-a4e0-958472e6f850 -C3N-02192 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02192.filtered.AD.5.noLongINDELS.vcf.gz 7151530 VCF 669acf705a704099bf2d0a1f5f8b71b1 C3N-02192.WXS.N.hg38 f4e025d4-04a1-4733-9abf-156fa4e2e3ff -C3N-02193 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02193.filtered.AD.5.noLongINDELS.vcf.gz 6860524 VCF f0be956a420607828890217c3e8b5348 C3N-02193.WXS.N.hg38 6bd614a4-31a1-45e4-969c-ff3120d83d75 -C3N-02230 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02230.filtered.AD.5.noLongINDELS.vcf.gz 6020193 VCF 6062b31af820839a55c0446fd8fc155d C3N-02230.WXS.N.hg38 1e1dc983-9275-41fe-9e03-951fb0d1dcfa -C3N-02234 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02234.filtered.AD.5.noLongINDELS.vcf.gz 6972955 VCF 05084c1795b5002e06920a90a253a6c8 C3N-02234.WXS.N.hg38 96b5390c-ddd0-4735-95c7-fa0fb022a836 -C3N-02237 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02237.filtered.AD.5.noLongINDELS.vcf.gz 6887076 VCF 1d0ada7c4288064b22c108bb6dcc9ff4 C3N-02237.WXS.N.hg38 4959a093-6ccb-4ae3-ae17-1e988e67f35d -C3N-02240 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02240.filtered.AD.5.noLongINDELS.vcf.gz 6288773 VCF ea92b5758adf33eb7d4cb1d2a7ee397b C3N-02240.WXS.N.hg38 bbce8743-b197-4cd9-a30a-7ad27925e1a3 -C3N-02242 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02242.filtered.AD.5.noLongINDELS.vcf.gz 5982610 VCF f1ad3357ecc59c6116d521d7eea5b7e3 C3N-02242.WXS.N.hg38 af86f4e3-5f6d-4c54-9a95-71dafc835215 +C3N-02192 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02192.filtered.AD.5.noLongINDELS.vcf.gz 7151530 VCF 669acf705a704099bf2d0a1f5f8b71b1 C3N-02192.WXS.N.hg38 f4e025d4-04a1-4733-9abf-156fa4e2e3ff +C3N-02193 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02193.filtered.AD.5.noLongINDELS.vcf.gz 6860524 VCF f0be956a420607828890217c3e8b5348 C3N-02193.WXS.N.hg38 6bd614a4-31a1-45e4-969c-ff3120d83d75 +C3N-02230 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02230.filtered.AD.5.noLongINDELS.vcf.gz 6020193 VCF 6062b31af820839a55c0446fd8fc155d C3N-02230.WXS.N.hg38 1e1dc983-9275-41fe-9e03-951fb0d1dcfa +C3N-02234 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02234.filtered.AD.5.noLongINDELS.vcf.gz 6972955 VCF 05084c1795b5002e06920a90a253a6c8 C3N-02234.WXS.N.hg38 96b5390c-ddd0-4735-95c7-fa0fb022a836 +C3N-02237 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02237.filtered.AD.5.noLongINDELS.vcf.gz 6887076 VCF 1d0ada7c4288064b22c108bb6dcc9ff4 C3N-02237.WXS.N.hg38 4959a093-6ccb-4ae3-ae17-1e988e67f35d +C3N-02240 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02240.filtered.AD.5.noLongINDELS.vcf.gz 6288773 VCF ea92b5758adf33eb7d4cb1d2a7ee397b C3N-02240.WXS.N.hg38 bbce8743-b197-4cd9-a30a-7ad27925e1a3 +C3N-02242 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02242.filtered.AD.5.noLongINDELS.vcf.gz 5982610 VCF f1ad3357ecc59c6116d521d7eea5b7e3 C3N-02242.WXS.N.hg38 af86f4e3-5f6d-4c54-9a95-71dafc835215 C3N-02252 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02252.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-02252.WXS.N.hg38 66ed598c-f43d-44a5-b496-af4330c65856 C3N-02252 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02252.filtered.ROI.AD.5.INDELS.NS.vcf.gz 393557 VCF 1151a128fc0c8775a8a2ac0ccf4c632d C3N-02252.WXS.N.hg38 66ed598c-f43d-44a5-b496-af4330c65856 C3N-02252 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02252.filtered.AD.5.noLongINDELS.vcf.gz 2977772 VCF 276fb110e8a9b6bda46754fb718351ac C3N-02252.WXS.N.hg38 66ed598c-f43d-44a5-b496-af4330c65856 @@ -1371,13 +1371,13 @@ C3N-02255 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_ C3N-02255 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02255.filtered.AD.5.noLongINDELS.vcf.gz 6437518 VCF c29348cfb7eab513b5024224f5424ed5 C3N-02255.WXS.N.hg38 adcc17ae-cf95-4352-9db6-66f4243c90c2 C3N-02256 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02256.filtered.ROI.AD.5.INDELS.NS.vcf.gz 688820 VCF 9bba5a1d4ae1573fb248e7fafcdc2b80 C3N-02256.WXS.N.hg38 8fef8636-d43f-4194-85bc-d2e3f909b35b C3N-02256 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02256.filtered.AD.5.noLongINDELS.vcf.gz 6623975 VCF a2224cea9bff8ddce700afce9d86b452 C3N-02256.WXS.N.hg38 8fef8636-d43f-4194-85bc-d2e3f909b35b -C3N-02259 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02259.filtered.AD.5.noLongINDELS.vcf.gz 6039089 VCF 831ceebb2c02a67c6f5559014dd0ffdb C3N-02259.WXS.N.hg38 4e909555-b3b3-4165-bfb3-76380c7e964e +C3N-02259 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02259.filtered.AD.5.noLongINDELS.vcf.gz 6039089 VCF 831ceebb2c02a67c6f5559014dd0ffdb C3N-02259.WXS.N.hg38 4e909555-b3b3-4165-bfb3-76380c7e964e C3N-02275 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02275.filtered.ROI.AD.5.INDELS.NS.vcf.gz 672887 VCF 7f781548d95cae5a9352ec36fde40645 C3N-02275.WXS.N.hg38 4dad8cda-80c7-4acd-a416-f9e5b689ef79 C3N-02275 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02275.filtered.AD.5.noLongINDELS.vcf.gz 5216173 VCF f3af990c5dfc9562433842b0ef9baad6 C3N-02275.WXS.N.hg38 4dad8cda-80c7-4acd-a416-f9e5b689ef79 C3N-02279 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02279.filtered.ROI.AD.5.INDELS.NS.vcf.gz 703722 VCF eed90c07bd41b9de3ac6df086a8f5070 C3N-02279.WXS.N.hg38 e3eb5bf7-cdc8-4e9b-8a32-2a2b900f81e0 C3N-02279 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02279.filtered.AD.5.noLongINDELS.vcf.gz 6415790 VCF 5935dc93572727a84b0b7aea1a6298ad C3N-02279.WXS.N.hg38 e3eb5bf7-cdc8-4e9b-8a32-2a2b900f81e0 -C3N-02281 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02281.filtered.AD.5.noLongINDELS.vcf.gz 6345557 VCF afb627c24f53d9f60bca754c37e2f953 C3N-02281.WXS.N.hg38 8f5e0dfc-b9e8-4c58-bbdf-3b3cd7e9f122 -C3N-02282 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02282.filtered.AD.5.noLongINDELS.vcf.gz 6564903 VCF ff2ed6b4b66c90775fbae7339b73a1a6 C3N-02282.WXS.N.hg38 91f15acd-1f52-47f3-8a16-3864586136fe +C3N-02281 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02281.filtered.AD.5.noLongINDELS.vcf.gz 6345557 VCF afb627c24f53d9f60bca754c37e2f953 C3N-02281.WXS.N.hg38 8f5e0dfc-b9e8-4c58-bbdf-3b3cd7e9f122 +C3N-02282 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02282.filtered.AD.5.noLongINDELS.vcf.gz 6564903 VCF ff2ed6b4b66c90775fbae7339b73a1a6 C3N-02282.WXS.N.hg38 91f15acd-1f52-47f3-8a16-3864586136fe C3N-02283 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02283.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-02283.WXS.N.hg38 af167ea3-342a-4fcd-8a84-580c91dd33f0 C3N-02283 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02283.filtered.ROI.AD.5.INDELS.NS.vcf.gz 407825 VCF bfe43965e7fa160c9ce9305350e106dc C3N-02283.WXS.N.hg38 af167ea3-342a-4fcd-8a84-580c91dd33f0 C3N-02283 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02283.filtered.AD.5.noLongINDELS.vcf.gz 3810135 VCF 93b145db3d3d0528f9033f911b70ee36 C3N-02283.WXS.N.hg38 af167ea3-342a-4fcd-8a84-580c91dd33f0 @@ -1387,14 +1387,14 @@ C3N-02284 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_ C3N-02285 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02285.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-02285.WXS.N.hg38 c2f3061e-edf4-488b-83fb-72037b2259b5 C3N-02285 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02285.filtered.ROI.AD.5.INDELS.NS.vcf.gz 411596 VCF 7ae6ca3ca4a3c6de93a8d6c674863568 C3N-02285.WXS.N.hg38 c2f3061e-edf4-488b-83fb-72037b2259b5 C3N-02285 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02285.filtered.AD.5.noLongINDELS.vcf.gz 3765441 VCF c9b5009827806f20c163f09c002eaf92 C3N-02285.WXS.N.hg38 c2f3061e-edf4-488b-83fb-72037b2259b5 -C3N-02286 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02286.filtered.AD.5.noLongINDELS.vcf.gz 6444795 VCF f29cdbf3b7e4711038415b9ee8125768 C3N-02286.WXS.N.hg38 c4f55a53-fd44-45ee-906c-dc8706ec87b2 +C3N-02286 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02286.filtered.AD.5.noLongINDELS.vcf.gz 6444795 VCF f29cdbf3b7e4711038415b9ee8125768 C3N-02286.WXS.N.hg38 c4f55a53-fd44-45ee-906c-dc8706ec87b2 C3N-02288 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02288.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-02288.WXS.N.hg38 4c312282-97da-44e1-8846-29ce79da0f50 C3N-02288 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02288.filtered.ROI.AD.5.INDELS.NS.vcf.gz 409866 VCF 2d05b5828782e294ca8fbe5a7c3363a0 C3N-02288.WXS.N.hg38 4c312282-97da-44e1-8846-29ce79da0f50 C3N-02288 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02288.filtered.AD.5.noLongINDELS.vcf.gz 3498265 VCF ab136f928103dea470eb8da3bf84ca17 C3N-02288.WXS.N.hg38 4c312282-97da-44e1-8846-29ce79da0f50 C3N-02289 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02289.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-02289.WXS.N.hg38 899a7f1c-1488-4359-99ed-7369191b8979 C3N-02289 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02289.filtered.ROI.AD.5.INDELS.NS.vcf.gz 428523 VCF 48f8269ca0cb993bb65532512111898b C3N-02289.WXS.N.hg38 899a7f1c-1488-4359-99ed-7369191b8979 C3N-02289 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02289.filtered.AD.5.noLongINDELS.vcf.gz 3997746 VCF e7dadf0faf2fcbf9286465609a36ddd9 C3N-02289.WXS.N.hg38 899a7f1c-1488-4359-99ed-7369191b8979 -C3N-02290 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02290.filtered.AD.5.noLongINDELS.vcf.gz 5525877 VCF 94a92bf6384631a22d41662a7f13ba7d C3N-02290.WXS.N.hg38 dca076f4-1d01-45a0-b937-193cefeb4201 +C3N-02290 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02290.filtered.AD.5.noLongINDELS.vcf.gz 5525877 VCF 94a92bf6384631a22d41662a7f13ba7d C3N-02290.WXS.N.hg38 dca076f4-1d01-45a0-b937-193cefeb4201 C3N-02295 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02295.filtered.ROI.AD.5.INDELS.NS.vcf.gz 695308 VCF 6dd568342422b39a3856fdd0d4fc5f86 C3N-02295.WXS.N.hg38 88e500c6-e2ce-4bc8-b6c6-aaffd157039d C3N-02295 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02295.filtered.AD.5.noLongINDELS.vcf.gz 6908028 VCF c66730a0886f4d5d34a8c1e68b757ada C3N-02295.WXS.N.hg38 88e500c6-e2ce-4bc8-b6c6-aaffd157039d C3N-02300 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02300.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-02300.WXS.N.hg38 efb4390e-7744-4b34-9606-9d263a6dde14 @@ -1437,7 +1437,7 @@ C3N-02434 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_ C3N-02435 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02435.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-02435.WXS.N.hg38 db1c4701-ae3b-45fa-a6aa-6c6356cac883 C3N-02435 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02435.filtered.ROI.AD.5.INDELS.NS.vcf.gz 416302 VCF f53d554b0a9fcfc376e8f867c9e58d61 C3N-02435.WXS.N.hg38 db1c4701-ae3b-45fa-a6aa-6c6356cac883 C3N-02435 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02435.filtered.AD.5.noLongINDELS.vcf.gz 4107295 VCF 6398f0575ffc4d3bed99ccdac3255138 C3N-02435.WXS.N.hg38 db1c4701-ae3b-45fa-a6aa-6c6356cac883 -C3N-02451 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02451.filtered.AD.5.noLongINDELS.vcf.gz 7687635 VCF c273fd13d49bcf97352eeaa9816b737b C3N-02451.WXS.N.hg38 a8da60ec-83c4-4608-b4eb-bbc7882ebf29 +C3N-02451 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02451.filtered.AD.5.noLongINDELS.vcf.gz 7687635 VCF c273fd13d49bcf97352eeaa9816b737b C3N-02451.WXS.N.hg38 a8da60ec-83c4-4608-b4eb-bbc7882ebf29 C3N-02494 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02494.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-02494.WXS.N.hg38 88f0822d-0b68-4b77-95b0-f912e0b85cbd C3N-02494 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02494.filtered.ROI.AD.5.INDELS.NS.vcf.gz 492090 VCF 0517ba38e516a11e477cd1195ea5b9a6 C3N-02494.WXS.N.hg38 88f0822d-0b68-4b77-95b0-f912e0b85cbd C3N-02494 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02494.filtered.AD.5.noLongINDELS.vcf.gz 4767861 VCF f243ab55eb5548c7faba4e0dfabd5d68 C3N-02494.WXS.N.hg38 88f0822d-0b68-4b77-95b0-f912e0b85cbd @@ -1469,14 +1469,14 @@ C3N-02589 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_ C3N-02589 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02589.filtered.AD.5.noLongINDELS.vcf.gz 6575149 VCF 778afd2c6ec11631dd0bcbc3bbe2168d C3N-02589.WXS.N.hg38 9b1b16ca-4dba-4f0f-a4b0-16588c3d3d05 C3N-02592 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02592.filtered.ROI.AD.5.INDELS.NS.vcf.gz 678391 VCF 1e93912d935a6b956a70a2282560c383 C3N-02592.WXS.N.hg38 0bf1b98c-fa49-4fb7-8b8c-edb0059aa775 C3N-02592 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02592.filtered.AD.5.noLongINDELS.vcf.gz 6367321 VCF 9cb3d68ba929471b51d371dbe873054b C3N-02592.WXS.N.hg38 0bf1b98c-fa49-4fb7-8b8c-edb0059aa775 -C3N-02599 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02599.filtered.AD.5.noLongINDELS.vcf.gz 6410302 VCF dc6e9f25538a3a96376587ff4aaf87ca C3N-02599.WXS.N.hg38 5aab09ad-6c94-42a4-bcc2-7ee916573a28 -C3N-02672 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02672.filtered.AD.5.noLongINDELS.vcf.gz 6666730 VCF 1e0566d0dacb62973958fc37bb4e12a5 C3N-02672.WXS.N.hg38 254541eb-69b9-406f-affe-2491cac9ca24 +C3N-02599 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02599.filtered.AD.5.noLongINDELS.vcf.gz 6410302 VCF dc6e9f25538a3a96376587ff4aaf87ca C3N-02599.WXS.N.hg38 5aab09ad-6c94-42a4-bcc2-7ee916573a28 +C3N-02672 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02672.filtered.AD.5.noLongINDELS.vcf.gz 6666730 VCF 1e0566d0dacb62973958fc37bb4e12a5 C3N-02672.WXS.N.hg38 254541eb-69b9-406f-affe-2491cac9ca24 C3N-02675 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02675.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-02675.WXS.N.hg38 589bf1b6-fabf-403b-9026-85a37176cfba C3N-02675 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02675.filtered.ROI.AD.5.INDELS.NS.vcf.gz 404151 VCF bf07f5ae61068a595e8a809f127faf62 C3N-02675.WXS.N.hg38 589bf1b6-fabf-403b-9026-85a37176cfba C3N-02675 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02675.filtered.AD.5.noLongINDELS.vcf.gz 3742502 VCF 676aa602a8e96e5c055dc827421c4097 C3N-02675.WXS.N.hg38 589bf1b6-fabf-403b-9026-85a37176cfba -C3N-02681 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02681.filtered.AD.5.noLongINDELS.vcf.gz 5646919 VCF b12196be1cf3d19618b783bfb367df00 C3N-02681.WXS.N.hg38 1dee4a31-a455-4094-9bca-8c5728420d08 -C3N-02682 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02682.filtered.AD.5.noLongINDELS.vcf.gz 6811978 VCF 1b76898e93a9744fb5877034941962b5 C3N-02682.WXS.N.hg38 8a53e18d-9895-42a2-9ec6-31f7bb5fcb77 -C3N-02683 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02683.filtered.AD.5.noLongINDELS.vcf.gz 5330410 VCF 2ccfd5b2b70af35993ff6fcd782fbd5e C3N-02683.WXS.N.hg38 d0263ae2-aa97-470b-9b51-bb94d28b6edc +C3N-02681 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02681.filtered.AD.5.noLongINDELS.vcf.gz 5646919 VCF b12196be1cf3d19618b783bfb367df00 C3N-02681.WXS.N.hg38 1dee4a31-a455-4094-9bca-8c5728420d08 +C3N-02682 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02682.filtered.AD.5.noLongINDELS.vcf.gz 6811978 VCF 1b76898e93a9744fb5877034941962b5 C3N-02682.WXS.N.hg38 8a53e18d-9895-42a2-9ec6-31f7bb5fcb77 +C3N-02683 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02683.filtered.AD.5.noLongINDELS.vcf.gz 5330410 VCF 2ccfd5b2b70af35993ff6fcd782fbd5e C3N-02683.WXS.N.hg38 d0263ae2-aa97-470b-9b51-bb94d28b6edc C3N-02693 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02693.filtered.ROI.AD.5.INDELS.NS.vcf.gz 698332 VCF 4ecfd5a10255061b0800eb9f5dd6fb18 C3N-02693.WXS.N.hg38 5e32bf3d-4e7d-495c-883a-8a503a185767 C3N-02693 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02693.filtered.AD.5.noLongINDELS.vcf.gz 7449170 VCF 3603391a7b299b9af44b1b59af6f626c C3N-02693.WXS.N.hg38 5e32bf3d-4e7d-495c-883a-8a503a185767 C3N-02694 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02694.filtered.ROI.AD.5.INDELS.NS.vcf.gz 681469 VCF ff53533b0487a8eade99f44c3d8c08f0 C3N-02694.WXS.N.hg38 4aa080b1-72aa-468b-b377-469f764caeed @@ -1489,21 +1489,21 @@ C3N-02713 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSC C3N-02713 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02713.filtered.AD.5.noLongINDELS.vcf.gz 6435688 VCF 41848250c7b44722314ed41b12d838e4 C3N-02713.WXS.N.hg38 7059f8f6-c62a-4f7b-80c5-eac4a9f710b2 C3N-02714 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02714.filtered.ROI.AD.5.INDELS.NS.vcf.gz 678735 VCF 81b0c9800ed91fced84be564feb1e797 C3N-02714.WXS.N.hg38 60036501-5c3f-425f-b353-a64cc8be71e7 C3N-02714 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02714.filtered.AD.5.noLongINDELS.vcf.gz 6048944 VCF 3ac843e0f3e1a2ff2c81081ab6e0f6af C3N-02714.WXS.N.hg38 60036501-5c3f-425f-b353-a64cc8be71e7 -C3N-02715 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02715.filtered.AD.5.noLongINDELS.vcf.gz 6413174 VCF e211ce937730afa66c8672835f461539 C3N-02715.WXS.N.hg38 365839ce-f25a-470c-ae78-31612e6eace8 +C3N-02715 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02715.filtered.AD.5.noLongINDELS.vcf.gz 6413174 VCF e211ce937730afa66c8672835f461539 C3N-02715.WXS.N.hg38 365839ce-f25a-470c-ae78-31612e6eace8 C3N-02716 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02716.filtered.ROI.AD.5.INDELS.NS.vcf.gz 694401 VCF fefde9876ddc12c0e5dc558177e05ff4 C3N-02716.WXS.N.hg38 836ef24f-275a-49d5-b56e-cbf6b37d6d62 C3N-02716 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02716.filtered.AD.5.noLongINDELS.vcf.gz 6551563 VCF c50deab5a69e2980f8f0bff88049a71c C3N-02716.WXS.N.hg38 836ef24f-275a-49d5-b56e-cbf6b37d6d62 -C3N-02718 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02718.filtered.AD.5.noLongINDELS.vcf.gz 6589242 VCF fcbb030338432e7e4d7e293bd7025a01 C3N-02718.WXS.N.hg38 86c0d1c0-70da-4141-a527-e78ca49000d3 -C3N-02721 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02721.filtered.AD.5.noLongINDELS.vcf.gz 7449418 VCF 82b415d96668ee267ebc05802a414adc C3N-02721.WXS.N.hg38 885ee210-8b91-479a-ac14-c134d7954134 +C3N-02718 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02718.filtered.AD.5.noLongINDELS.vcf.gz 6589242 VCF fcbb030338432e7e4d7e293bd7025a01 C3N-02718.WXS.N.hg38 86c0d1c0-70da-4141-a527-e78ca49000d3 +C3N-02721 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02721.filtered.AD.5.noLongINDELS.vcf.gz 7449418 VCF 82b415d96668ee267ebc05802a414adc C3N-02721.WXS.N.hg38 885ee210-8b91-479a-ac14-c134d7954134 C3N-02727 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02727.filtered.ROI.AD.5.INDELS.NS.vcf.gz 686545 VCF a4297595b21bb63edb4501b3fb56a4ea C3N-02727.WXS.N.hg38 35952812-07f6-4892-853d-756808de65d2 C3N-02727 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02727.filtered.AD.5.noLongINDELS.vcf.gz 6375668 VCF e71dfac3975a5df6de709f2690a45d5a C3N-02727.WXS.N.hg38 35952812-07f6-4892-853d-756808de65d2 -C3N-02728 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02728.filtered.AD.5.noLongINDELS.vcf.gz 6757178 VCF f9c26f26869f114846b62a4a1578de3e C3N-02728.WXS.N.hg38 7141d494-8fdd-4692-b090-cf99573aefc6 +C3N-02728 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02728.filtered.AD.5.noLongINDELS.vcf.gz 6757178 VCF f9c26f26869f114846b62a4a1578de3e C3N-02728.WXS.N.hg38 7141d494-8fdd-4692-b090-cf99573aefc6 C3N-02729 LUAD WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02729.filtered.ROI.AD.5.INDELS.NS.vcf.gz 686986 VCF cd0325a889a0de78f1ecac2a09039b5c C3N-02729.WXS.N.hg38 17748956-bce7-4c4d-a6fe-725f2c7cc030 C3N-02729 LUAD WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02729.filtered.AD.5.noLongINDELS.vcf.gz 8211633 VCF f0d1721846571289e3b895dff449d3a9 C3N-02729.WXS.N.hg38 17748956-bce7-4c4d-a6fe-725f2c7cc030 C3N-02730 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02730.filtered.ROI.AD.5.INDELS.NS.vcf.gz 723460 VCF fd7fe07479a8b0398109c80d91a72043 C3N-02730.WXS.N.hg38 100e34c1-170c-4dbd-ad63-de812aa9378a C3N-02730 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02730.filtered.AD.5.noLongINDELS.vcf.gz 7542644 VCF 8877b37b0753e147470621a98e9a1833 C3N-02730.WXS.N.hg38 100e34c1-170c-4dbd-ad63-de812aa9378a -C3N-02757 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02757.filtered.AD.5.noLongINDELS.vcf.gz 5829919 VCF 0db1a41adbd62118d2480b75df90af5b C3N-02757.WXS.N.hg38 d298a4fd-d84a-4353-8edb-bf285b0608aa -C3N-02758 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02758.filtered.AD.5.noLongINDELS.vcf.gz 6831169 VCF 1611aa09d0ef60a7d6cbcba616cd5617 C3N-02758.WXS.N.hg38 e198681a-c62b-4d8c-942b-04aceec8117c -C3N-02764 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02764.filtered.AD.5.noLongINDELS.vcf.gz 5822255 VCF 9a767fc751eda94011d3fffb18d26496 C3N-02764.WXS.N.hg38 1d9880d8-f0e9-4c28-ad1e-4b0c121db2bd +C3N-02757 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02757.filtered.AD.5.noLongINDELS.vcf.gz 5829919 VCF 0db1a41adbd62118d2480b75df90af5b C3N-02757.WXS.N.hg38 d298a4fd-d84a-4353-8edb-bf285b0608aa +C3N-02758 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02758.filtered.AD.5.noLongINDELS.vcf.gz 6831169 VCF 1611aa09d0ef60a7d6cbcba616cd5617 C3N-02758.WXS.N.hg38 e198681a-c62b-4d8c-942b-04aceec8117c +C3N-02764 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02764.filtered.AD.5.noLongINDELS.vcf.gz 5822255 VCF 9a767fc751eda94011d3fffb18d26496 C3N-02764.WXS.N.hg38 1d9880d8-f0e9-4c28-ad1e-4b0c121db2bd C3N-02768 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02768.filtered.ROI.AD.5.INDELS.NS.vcf.gz 699433 VCF f50753ace69baa17fe467e6535f427e6 C3N-02768.WXS.N.hg38 459b4750-5988-457b-802e-11b433855e2c C3N-02768 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02768.filtered.AD.5.noLongINDELS.vcf.gz 7188714 VCF 8980b9805f886df4f309b05d774bb448 C3N-02768.WXS.N.hg38 459b4750-5988-457b-802e-11b433855e2c C3N-02769 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02769.filtered.ROI.AD.5.INDELS.NS.vcf.gz 693784 VCF 138512c10a1ce82dd0575c197cca1a52 C3N-02769.WXS.N.hg38 ed6b5bb1-8c97-4511-a72d-f0d77d4ba5f2 @@ -1522,32 +1522,32 @@ C3N-02786 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_ C3N-02786 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02786.filtered.AD.5.noLongINDELS.vcf.gz 5889892 VCF 6d03f7edd673cb1ab7595b9a8ebce0fb C3N-02786.WXS.N.hg38 6dc8a3c2-fcf3-454e-a7ff-c7d68221afe5 C3N-02788 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02788.filtered.ROI.AD.5.INDELS.NS.vcf.gz 690543 VCF 645851e1f039d3c02d800f17a752fa56 C3N-02788.WXS.N.hg38 c488d878-1022-4929-890c-4b0615bcf063 C3N-02788 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02788.filtered.AD.5.noLongINDELS.vcf.gz 6721610 VCF 92a8ee7559e14921085622388c568b27 C3N-02788.WXS.N.hg38 c488d878-1022-4929-890c-4b0615bcf063 -C3N-02828 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02828.filtered.AD.5.noLongINDELS.vcf.gz 7052927 VCF 8f0a09dc2404fbd90e9959239d2b3250 C3N-02828.WXS.N.hg38 f257f0af-dc46-4fec-9b7d-5ffc3cdc02d6 -C3N-02916 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02916.filtered.AD.5.noLongINDELS.vcf.gz 6277574 VCF 313a1379150ce9ed5293dc6d0d6816f1 C3N-02916.WXS.N.hg38 75bdeefd-94e5-448f-81f8-53425d99b910 -C3N-02919 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02919.filtered.AD.5.noLongINDELS.vcf.gz 6804453 VCF dc4d35104cf438c5bb292d4ac1e08c2b C3N-02919.WXS.N.hg38 5fd26427-3b21-40e5-8ac2-fe337256792b -C3N-02920 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02920.filtered.AD.5.noLongINDELS.vcf.gz 6411897 VCF cad19094406852879e539ab3ae3ebaeb C3N-02920.WXS.N.hg38 edfc0c96-97e4-43b1-8f22-b9bf45ca2398 -C3N-02922 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02922.filtered.AD.5.noLongINDELS.vcf.gz 7024803 VCF 308d6fc926d58cd28c0feb4657bf7c0f C3N-02922.WXS.N.hg38 21130862-7d27-4174-9556-648285793d43 -C3N-02923 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02923.filtered.AD.5.noLongINDELS.vcf.gz 6111281 VCF 1f87ccf231d6384ff392e4bd70ed6b32 C3N-02923.WXS.N.hg38 a0c3f073-4879-4d0a-b9a8-97a2ec45043e +C3N-02828 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02828.filtered.AD.5.noLongINDELS.vcf.gz 7052927 VCF 8f0a09dc2404fbd90e9959239d2b3250 C3N-02828.WXS.N.hg38 f257f0af-dc46-4fec-9b7d-5ffc3cdc02d6 +C3N-02916 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02916.filtered.AD.5.noLongINDELS.vcf.gz 6277574 VCF 313a1379150ce9ed5293dc6d0d6816f1 C3N-02916.WXS.N.hg38 75bdeefd-94e5-448f-81f8-53425d99b910 +C3N-02919 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02919.filtered.AD.5.noLongINDELS.vcf.gz 6804453 VCF dc4d35104cf438c5bb292d4ac1e08c2b C3N-02919.WXS.N.hg38 5fd26427-3b21-40e5-8ac2-fe337256792b +C3N-02920 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02920.filtered.AD.5.noLongINDELS.vcf.gz 6411897 VCF cad19094406852879e539ab3ae3ebaeb C3N-02920.WXS.N.hg38 edfc0c96-97e4-43b1-8f22-b9bf45ca2398 +C3N-02922 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02922.filtered.AD.5.noLongINDELS.vcf.gz 7024803 VCF 308d6fc926d58cd28c0feb4657bf7c0f C3N-02922.WXS.N.hg38 21130862-7d27-4174-9556-648285793d43 +C3N-02923 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02923.filtered.AD.5.noLongINDELS.vcf.gz 6111281 VCF 1f87ccf231d6384ff392e4bd70ed6b32 C3N-02923.WXS.N.hg38 a0c3f073-4879-4d0a-b9a8-97a2ec45043e C3N-02925 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02925.filtered.ROI.AD.5.INDELS.NS.vcf.gz 693898 VCF d529d4ad771a7cd38b13e61d20c7f901 C3N-02925.WXS.N.hg38 62092a85-dd9b-4735-8631-676673426d05 C3N-02925 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02925.filtered.AD.5.noLongINDELS.vcf.gz 6528788 VCF 5c48ab5d06edaae9b6078b5dcda0a48c C3N-02925.WXS.N.hg38 62092a85-dd9b-4735-8631-676673426d05 -C3N-02926 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02926.filtered.AD.5.noLongINDELS.vcf.gz 6616563 VCF 270ad6679b611d20f95c3ec430957cf1 C3N-02926.WXS.N.hg38 7b570ea8-78e7-4282-b970-2dc4af85ef8b -C3N-02928 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02928.filtered.AD.5.noLongINDELS.vcf.gz 6848339 VCF 49e5cb288a89e6167ceb3248307caca5 C3N-02928.WXS.N.hg38 ab19a326-7d5c-4e69-b669-49dd0e238120 -C3N-02929 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02929.filtered.AD.5.noLongINDELS.vcf.gz 6227773 VCF 925fb694d2c5fdab561de30036d82799 C3N-02929.WXS.N.hg38 864a3d57-5ac4-4c39-9e16-6720f7985633 +C3N-02926 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02926.filtered.AD.5.noLongINDELS.vcf.gz 6616563 VCF 270ad6679b611d20f95c3ec430957cf1 C3N-02926.WXS.N.hg38 7b570ea8-78e7-4282-b970-2dc4af85ef8b +C3N-02928 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02928.filtered.AD.5.noLongINDELS.vcf.gz 6848339 VCF 49e5cb288a89e6167ceb3248307caca5 C3N-02928.WXS.N.hg38 ab19a326-7d5c-4e69-b669-49dd0e238120 +C3N-02929 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02929.filtered.AD.5.noLongINDELS.vcf.gz 6227773 VCF 925fb694d2c5fdab561de30036d82799 C3N-02929.WXS.N.hg38 864a3d57-5ac4-4c39-9e16-6720f7985633 C3N-02940 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02940.filtered.ROI.AD.5.INDELS.NS.vcf.gz 687349 VCF c58e4f2ecac94a87716675148090fa78 C3N-02940.WXS.N.hg38 a888a917-2ee1-4427-a20f-3420fa6ef756 C3N-02940 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02940.filtered.AD.5.noLongINDELS.vcf.gz 6799099 VCF ee5cf61215575aec0b84b006f2d7160e C3N-02940.WXS.N.hg38 a888a917-2ee1-4427-a20f-3420fa6ef756 C3N-02944 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02944.filtered.ROI.AD.5.INDELS.NS.vcf.gz 671243 VCF f3be5e6dc786fc2485140623b82819fb C3N-02944.WXS.N.hg38 174062e6-33ad-4b74-92d0-22518321013c C3N-02944 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02944.filtered.AD.5.noLongINDELS.vcf.gz 6336678 VCF ac44fbb1f9e1e07e1d094d9de48e3f39 C3N-02944.WXS.N.hg38 174062e6-33ad-4b74-92d0-22518321013c -C3N-02948 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02948.filtered.AD.5.noLongINDELS.vcf.gz 6999083 VCF 73835b71357a4a6341c8f84a429aecfc C3N-02948.WXS.N.hg38 1715b6d5-afb1-4758-858b-36288eb4f8cb -C3N-02950 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02950.filtered.AD.5.noLongINDELS.vcf.gz 6989387 VCF deeff47fa5505e7f0bf6186134cc12a4 C3N-02950.WXS.N.hg38 752e7d6c-d010-4603-86aa-f5934f2ee7d5 +C3N-02948 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02948.filtered.AD.5.noLongINDELS.vcf.gz 6999083 VCF 73835b71357a4a6341c8f84a429aecfc C3N-02948.WXS.N.hg38 1715b6d5-afb1-4758-858b-36288eb4f8cb +C3N-02950 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02950.filtered.AD.5.noLongINDELS.vcf.gz 6989387 VCF deeff47fa5505e7f0bf6186134cc12a4 C3N-02950.WXS.N.hg38 752e7d6c-d010-4603-86aa-f5934f2ee7d5 C3N-02971 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02971.filtered.ROI.AD.5.INDELS.NS.vcf.gz 687838 VCF d6e745fb339de8b66e4efd85eaf7b64b C3N-02971.WXS.N.hg38 fbc9f5b3-10ca-4ffc-8ffd-2d18c473f98d C3N-02971 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02971.filtered.AD.5.noLongINDELS.vcf.gz 6338714 VCF da8456d50a5ce11425895f16181a8d30 C3N-02971.WXS.N.hg38 fbc9f5b3-10ca-4ffc-8ffd-2d18c473f98d -C3N-02973 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02973.filtered.AD.5.noLongINDELS.vcf.gz 6494194 VCF 7b7ba5ba42bb7f2854df825c77dac14f C3N-02973.WXS.N.hg38 f8b28c64-1b73-4b17-8b86-cab8c95c69fc +C3N-02973 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-02973.filtered.AD.5.noLongINDELS.vcf.gz 6494194 VCF 7b7ba5ba42bb7f2854df825c77dac14f C3N-02973.WXS.N.hg38 f8b28c64-1b73-4b17-8b86-cab8c95c69fc C3N-02998 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-02998.filtered.ROI.AD.5.INDELS.NS.vcf.gz 690115 VCF 276a6ed01b8e2983aaa88db97ff2770d C3N-02998.WXS.N.hg38 d39404ab-d27e-4cc7-8390-3333fdff530f C3N-02998 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-02998.filtered.AD.5.noLongINDELS.vcf.gz 6518081 VCF c69094bd19cee05a82bdc1c7ea0d382d C3N-02998.WXS.N.hg38 d39404ab-d27e-4cc7-8390-3333fdff530f C3N-03000 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03000.filtered.ROI.AD.5.INDELS.NS.vcf.gz 675702 VCF d9fc2feae5d471381bca88bd9a670991 C3N-03000.WXS.N.hg38 6108bfea-9c5f-421a-8d73-41760132c927 C3N-03000 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03000.filtered.AD.5.noLongINDELS.vcf.gz 6651455 VCF 6c47264ee5a98eeefd43905acc05d5b8 C3N-03000.WXS.N.hg38 6108bfea-9c5f-421a-8d73-41760132c927 -C3N-03001 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03001.filtered.AD.5.noLongINDELS.vcf.gz 5633487 VCF 437b4fe723a6d039e2b420976cc7eb4d C3N-03001.WXS.N.hg38 6e69c87c-2a68-409e-832e-ea3516ed05d0 -C3N-03003 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03003.filtered.AD.5.noLongINDELS.vcf.gz 6654211 VCF 81b87938f692b186684e45ed761c97cf C3N-03003.WXS.N.hg38 e5df19e6-aad5-4a50-a453-b0d21278ea73 +C3N-03001 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03001.filtered.AD.5.noLongINDELS.vcf.gz 5633487 VCF 437b4fe723a6d039e2b420976cc7eb4d C3N-03001.WXS.N.hg38 6e69c87c-2a68-409e-832e-ea3516ed05d0 +C3N-03003 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03003.filtered.AD.5.noLongINDELS.vcf.gz 6654211 VCF 81b87938f692b186684e45ed761c97cf C3N-03003.WXS.N.hg38 e5df19e6-aad5-4a50-a453-b0d21278ea73 C3N-03006 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03006.filtered.ROI.AD.5.INDELS.NS.vcf.gz 679572 VCF db0cbf036d80a9ab99f9a3e20f20d1c4 C3N-03006.WXS.N.hg38 94490b00-bfd8-44d7-86cd-7c848ed8e719 C3N-03006 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03006.filtered.AD.5.noLongINDELS.vcf.gz 6225080 VCF 2505a643bd9dcccc195635b703343b00 C3N-03006.WXS.N.hg38 94490b00-bfd8-44d7-86cd-7c848ed8e719 C3N-03007 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03007.filtered.ROI.AD.5.INDELS.NS.vcf.gz 669115 VCF 86f3a233da92da1126e59af62022228e C3N-03007.WXS.N.hg38 8bafb618-9fca-461d-9062-e10478b3b002 @@ -1564,12 +1564,12 @@ C3N-03013 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSC C3N-03013 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03013.filtered.AD.5.noLongINDELS.vcf.gz 6394099 VCF d369c305209f7bcbd594e2cd4d561f2f C3N-03013.WXS.N.hg38 6fe75f44-dce3-4d1f-8e49-101661553d6c C3N-03015 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03015.filtered.ROI.AD.5.INDELS.NS.vcf.gz 692988 VCF 4834fad747e56256054da108282737ff C3N-03015.WXS.N.hg38 f28be4c8-230c-4769-9a1d-f5e4cf9d1f98 C3N-03015 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03015.filtered.AD.5.noLongINDELS.vcf.gz 6722295 VCF 44f14447df4b92a00a6244142711ae4e C3N-03015.WXS.N.hg38 f28be4c8-230c-4769-9a1d-f5e4cf9d1f98 -C3N-03025 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03025.filtered.AD.5.noLongINDELS.vcf.gz 6073555 VCF da0a40e5a25327e523f68b10e10ba865 C3N-03025.WXS.N.hg38 e1125a72-80e8-4cc6-aaa2-c4a09b1c8ef4 +C3N-03025 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03025.filtered.AD.5.noLongINDELS.vcf.gz 6073555 VCF da0a40e5a25327e523f68b10e10ba865 C3N-03025.WXS.N.hg38 e1125a72-80e8-4cc6-aaa2-c4a09b1c8ef4 C3N-03027 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03027.filtered.ROI.AD.5.INDELS.NS.vcf.gz 689255 VCF 44fd06858f4b155223ff4acb84e53581 C3N-03027.WXS.N.hg38 595ef8ef-53ca-42eb-9920-ffa1946341cd C3N-03027 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03027.filtered.AD.5.noLongINDELS.vcf.gz 6209542 VCF 75a122825bd81f4ede0144acc0f4eb74 C3N-03027.WXS.N.hg38 595ef8ef-53ca-42eb-9920-ffa1946341cd C3N-03028 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03028.filtered.ROI.AD.5.INDELS.NS.vcf.gz 665930 VCF 56620e7c913443c0f7276842349dbe9d C3N-03028.WXS.N.hg38 ef7578db-c8fe-41ce-be0c-25952fecf890 C3N-03028 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03028.filtered.AD.5.noLongINDELS.vcf.gz 5532681 VCF 793576b21cf3928c050d7e69b68cd257 C3N-03028.WXS.N.hg38 ef7578db-c8fe-41ce-be0c-25952fecf890 -C3N-03038 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03038.filtered.AD.5.noLongINDELS.vcf.gz 7204293 VCF e4e03476b13908ef9de82abdfd7ae7d1 C3N-03038.WXS.N.hg38 b40344b5-78c8-4723-98f8-32c37906669e +C3N-03038 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03038.filtered.AD.5.noLongINDELS.vcf.gz 7204293 VCF e4e03476b13908ef9de82abdfd7ae7d1 C3N-03038.WXS.N.hg38 b40344b5-78c8-4723-98f8-32c37906669e C3N-03039 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03039.filtered.ROI.AD.5.INDELS.NS.vcf.gz 699974 VCF 272490f387df0d2daed4001ec220c5be C3N-03039.WXS.N.hg38 b7c1b971-dfaa-4bd5-860c-590190910e48 C3N-03039 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03039.filtered.AD.5.noLongINDELS.vcf.gz 6144730 VCF 8d207c4cb05fafa77b546ef8c38124ca C3N-03039.WXS.N.hg38 b7c1b971-dfaa-4bd5-860c-590190910e48 C3N-03042 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03042.filtered.ROI.AD.5.INDELS.NS.vcf.gz 771781 VCF 22b79e6f350fb8780a15e6c706d7d569 C3N-03042.WXS.N.hg38 f100d754-c2c6-486e-ade6-263a0ac4a415 @@ -1579,12 +1579,12 @@ C3N-03045 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNS C3N-03051 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03051.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-03051.WXS.N.hg38 6090b05d-fc6b-44c2-9a57-d29c1b19d00a C3N-03051 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03051.filtered.ROI.AD.5.INDELS.NS.vcf.gz 417314 VCF 35293c96d282ddf404f199d0f215425d C3N-03051.WXS.N.hg38 6090b05d-fc6b-44c2-9a57-d29c1b19d00a C3N-03051 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03051.filtered.AD.5.noLongINDELS.vcf.gz 4490815 VCF 4e14f366e3e33b0711c36886a2346410 C3N-03051.WXS.N.hg38 6090b05d-fc6b-44c2-9a57-d29c1b19d00a -C3N-03052 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03052.filtered.AD.5.noLongINDELS.vcf.gz 6873008 VCF e11025c3437177b6ee902e9d8386f230 C3N-03052.WXS.N.hg38 41101b08-d76a-45eb-8c3f-90b3cb000ae6 -C3N-03054 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03054.filtered.AD.5.noLongINDELS.vcf.gz 6784624 VCF 38faf66bb0b2be60dc4e295870a8f229 C3N-03054.WXS.N.hg38 46aff873-db64-4e7d-99ac-397f176840aa -C3N-03057 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03057.filtered.AD.5.noLongINDELS.vcf.gz 6730023 VCF f4919456a9de04e4fbe2c928b81e3596 C3N-03057.WXS.N.hg38 0bc74f87-946e-4776-9a12-bff546e43138 +C3N-03052 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03052.filtered.AD.5.noLongINDELS.vcf.gz 6873008 VCF e11025c3437177b6ee902e9d8386f230 C3N-03052.WXS.N.hg38 41101b08-d76a-45eb-8c3f-90b3cb000ae6 +C3N-03054 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03054.filtered.AD.5.noLongINDELS.vcf.gz 6784624 VCF 38faf66bb0b2be60dc4e295870a8f229 C3N-03054.WXS.N.hg38 46aff873-db64-4e7d-99ac-397f176840aa +C3N-03057 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03057.filtered.AD.5.noLongINDELS.vcf.gz 6730023 VCF f4919456a9de04e4fbe2c928b81e3596 C3N-03057.WXS.N.hg38 0bc74f87-946e-4776-9a12-bff546e43138 C3N-03061 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03061.filtered.ROI.AD.5.INDELS.NS.vcf.gz 689044 VCF c2c3ffcbb56aad63f328af6f3ce94a83 C3N-03061.WXS.N.hg38 9770436b-43be-48f1-a7f1-fe75ba3d0668 C3N-03061 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03061.filtered.AD.5.noLongINDELS.vcf.gz 6244579 VCF 09c53cc54906066f3aa4f1b6105ff4d1 C3N-03061.WXS.N.hg38 9770436b-43be-48f1-a7f1-fe75ba3d0668 -C3N-03063 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03063.filtered.AD.5.noLongINDELS.vcf.gz 6229227 VCF 25fdec2338470e0f31f0e6d0a5e428b5 C3N-03063.WXS.N.hg38 a4d6b0e1-8b70-4ec5-85df-86bea7aab1a4 +C3N-03063 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03063.filtered.AD.5.noLongINDELS.vcf.gz 6229227 VCF 25fdec2338470e0f31f0e6d0a5e428b5 C3N-03063.WXS.N.hg38 a4d6b0e1-8b70-4ec5-85df-86bea7aab1a4 C3N-03069 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03069.filtered.ROI.AD.5.INDELS.NS.vcf.gz 682615 VCF bb52794db2280f05b46bacadc0a368e1 C3N-03069.WXS.N.hg38 78f6aa18-c016-4e21-9dbd-bdfdfe0db193 C3N-03069 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03069.filtered.AD.5.noLongINDELS.vcf.gz 6480980 VCF 06bea78db77d23ca7d088da6951bd942 C3N-03069.WXS.N.hg38 78f6aa18-c016-4e21-9dbd-bdfdfe0db193 C3N-03070 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03070.filtered.ROI.AD.5.INDELS.NS.vcf.gz 698718 VCF 762acce5fd25baf75a6bf02d304e43a0 C3N-03070.WXS.N.hg38 b1e95f84-e3a5-42e6-8f3c-3c36aa6d8717 @@ -1592,12 +1592,12 @@ C3N-03070 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS C3N-03072 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03072.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-03072.WXS.N.hg38 35c64665-2925-450f-afc4-cc81d12fab1a C3N-03072 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03072.filtered.ROI.AD.5.INDELS.NS.vcf.gz 414863 VCF c53dd11bcf72813fe7833f395bbd0602 C3N-03072.WXS.N.hg38 35c64665-2925-450f-afc4-cc81d12fab1a C3N-03072 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03072.filtered.AD.5.noLongINDELS.vcf.gz 3902706 VCF ca391deae513ef69424b90bbfb77abdd C3N-03072.WXS.N.hg38 35c64665-2925-450f-afc4-cc81d12fab1a -C3N-03073 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03073.filtered.AD.5.noLongINDELS.vcf.gz 7912535 VCF 61eb6c8babe84f7a8b4272e9814709ed C3N-03073.WXS.N.hg38 322f55df-1f82-414a-97ea-ce488d1523e6 -C3N-03074 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03074.filtered.AD.5.noLongINDELS.vcf.gz 6947173 VCF 7740c85fb5c8e042d0af61f4a9ed100e C3N-03074.WXS.N.hg38 e824b25d-5e59-4890-bc67-0b8b6a74ea2a +C3N-03073 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03073.filtered.AD.5.noLongINDELS.vcf.gz 7912535 VCF 61eb6c8babe84f7a8b4272e9814709ed C3N-03073.WXS.N.hg38 322f55df-1f82-414a-97ea-ce488d1523e6 +C3N-03074 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03074.filtered.AD.5.noLongINDELS.vcf.gz 6947173 VCF 7740c85fb5c8e042d0af61f4a9ed100e C3N-03074.WXS.N.hg38 e824b25d-5e59-4890-bc67-0b8b6a74ea2a C3N-03076 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03076.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-03076.WXS.N.hg38 ace21e30-003b-49dc-872f-eaa91c86810a C3N-03076 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03076.filtered.ROI.AD.5.INDELS.NS.vcf.gz 424470 VCF e74c6f1302feeae5d186f34fb016754a C3N-03076.WXS.N.hg38 ace21e30-003b-49dc-872f-eaa91c86810a C3N-03076 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03076.filtered.AD.5.noLongINDELS.vcf.gz 4514805 VCF b44ec52a4ca723d293bfe1c9ec34fef9 C3N-03076.WXS.N.hg38 ace21e30-003b-49dc-872f-eaa91c86810a -C3N-03080 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03080.filtered.AD.5.noLongINDELS.vcf.gz 6914364 VCF cf23d61a3aac126b8519b12895a6fafa C3N-03080.WXS.N.hg38 b8c46d0d-4c69-4089-b722-b4f667974a1d +C3N-03080 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03080.filtered.AD.5.noLongINDELS.vcf.gz 6914364 VCF cf23d61a3aac126b8519b12895a6fafa C3N-03080.WXS.N.hg38 b8c46d0d-4c69-4089-b722-b4f667974a1d C3N-03086 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03086.filtered.ROI.AD.5.INDELS.NS.vcf.gz 683281 VCF bd4bb6c0910d914966132681e16a1e07 C3N-03086.WXS.N.hg38 3fda5c3d-a966-45cc-8fe0-e7c3564f35fe C3N-03086 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03086.filtered.AD.5.noLongINDELS.vcf.gz 6966608 VCF d2f1eee139d47fe00d33a08da765b0a0 C3N-03086.WXS.N.hg38 3fda5c3d-a966-45cc-8fe0-e7c3564f35fe C3N-03088 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03088.filtered.ROI.AD.5.INDELS.NS.vcf.gz 678680 VCF fde3e7ddd024bb21385f4cf5a54c554a C3N-03088.WXS.N.hg38 9e51b077-3b4a-4bfa-a005-882b95040ecc @@ -1624,22 +1624,22 @@ C3N-03188 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_ C3N-03188 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03188.filtered.AD.5.noLongINDELS.vcf.gz 5860927 VCF 8b7590684b242ee03d70cf42571ede8a C3N-03188.WXS.N.hg38 cefaa0cb-ac0a-4738-a03f-512ffdee5526 C3N-03190 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03190.filtered.ROI.AD.5.INDELS.NS.vcf.gz 677785 VCF 249fa91cf946c0dd9ecd425260e109eb C3N-03190.WXS.N.hg38 7d1eb416-c93e-4044-b738-264127182e8a C3N-03190 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03190.filtered.AD.5.noLongINDELS.vcf.gz 6532993 VCF 6a6db62d78142ed066c6b156c8bad9b8 C3N-03190.WXS.N.hg38 7d1eb416-c93e-4044-b738-264127182e8a -C3N-03202 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03202.filtered.AD.5.noLongINDELS.vcf.gz 6692843 VCF 36d14b49212dfb252b712eaeaf073917 C3N-03202.WXS.N.hg38 40e83d14-2ffa-4ed2-b414-7fb8bece4a31 +C3N-03202 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03202.filtered.AD.5.noLongINDELS.vcf.gz 6692843 VCF 36d14b49212dfb252b712eaeaf073917 C3N-03202.WXS.N.hg38 40e83d14-2ffa-4ed2-b414-7fb8bece4a31 C3N-03204 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03204.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-03204.WXS.N.hg38 5c27e5f1-f18c-46f2-9e75-6b8000d93a64 C3N-03204 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03204.filtered.ROI.AD.5.INDELS.NS.vcf.gz 417174 VCF c035201c818adf91c97955ab81342ec3 C3N-03204.WXS.N.hg38 5c27e5f1-f18c-46f2-9e75-6b8000d93a64 C3N-03204 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03204.filtered.AD.5.noLongINDELS.vcf.gz 4212992 VCF aef4ce35de1106cac52e9e40f576586f C3N-03204.WXS.N.hg38 5c27e5f1-f18c-46f2-9e75-6b8000d93a64 -C3N-03205 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03205.filtered.AD.5.noLongINDELS.vcf.gz 6489543 VCF 6b45f1a13b017f3dffd70ef6b3120f3c C3N-03205.WXS.N.hg38 bdc1a23c-bc0c-4590-99e9-d5a2a08ee508 -C3N-03210 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03210.filtered.AD.5.noLongINDELS.vcf.gz 7160416 VCF 4b3564033e04caee901815ceaedecb60 C3N-03210.WXS.N.hg38 b2496f08-0280-45f9-a5b7-684b41072279 +C3N-03205 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03205.filtered.AD.5.noLongINDELS.vcf.gz 6489543 VCF 6b45f1a13b017f3dffd70ef6b3120f3c C3N-03205.WXS.N.hg38 bdc1a23c-bc0c-4590-99e9-d5a2a08ee508 +C3N-03210 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03210.filtered.AD.5.noLongINDELS.vcf.gz 7160416 VCF 4b3564033e04caee901815ceaedecb60 C3N-03210.WXS.N.hg38 b2496f08-0280-45f9-a5b7-684b41072279 C3N-03211 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03211.filtered.ROI.AD.5.INDELS.NS.vcf.gz 688457 VCF 27d75c49abcf50ee54961003fd682da8 C3N-03211.WXS.N.hg38 e07abafe-6426-498c-8e5a-77e12b305e46 C3N-03211 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03211.filtered.AD.5.noLongINDELS.vcf.gz 6841395 VCF 99d6c0a55599e3f91511d8bebb2e79cb C3N-03211.WXS.N.hg38 e07abafe-6426-498c-8e5a-77e12b305e46 -C3N-03212 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03212.filtered.AD.5.noLongINDELS.vcf.gz 6703655 VCF ac6b5abeeeb2c88f14ac82cec8453c43 C3N-03212.WXS.N.hg38 fa381013-5ff5-432a-b485-f3b98073ff91 -C3N-03222 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03222.filtered.AD.5.noLongINDELS.vcf.gz 5439906 VCF dbd267b81854c43828de328216ec4b4e C3N-03222.WXS.N.hg38 8aeaf54e-abc6-4689-9cb7-0858bbbd8436 -C3N-03225 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03225.filtered.AD.5.noLongINDELS.vcf.gz 6769523 VCF 770d9fdafa307e70042cd5aa40a4015b C3N-03225.WXS.N.hg38 88df6125-801b-4982-89ea-857f39903b46 +C3N-03212 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03212.filtered.AD.5.noLongINDELS.vcf.gz 6703655 VCF ac6b5abeeeb2c88f14ac82cec8453c43 C3N-03212.WXS.N.hg38 fa381013-5ff5-432a-b485-f3b98073ff91 +C3N-03222 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03222.filtered.AD.5.noLongINDELS.vcf.gz 5439906 VCF dbd267b81854c43828de328216ec4b4e C3N-03222.WXS.N.hg38 8aeaf54e-abc6-4689-9cb7-0858bbbd8436 +C3N-03225 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03225.filtered.AD.5.noLongINDELS.vcf.gz 6769523 VCF 770d9fdafa307e70042cd5aa40a4015b C3N-03225.WXS.N.hg38 88df6125-801b-4982-89ea-857f39903b46 C3N-03226 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03226.filtered.ROI.AD.5.INDELS.NS.vcf.gz 696193 VCF d1904b80e33fb666447eea4e0af07860 C3N-03226.WXS.N.hg38 3c8cb21b-c84b-48da-b870-d4b941b0b530 C3N-03226 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03226.filtered.AD.5.noLongINDELS.vcf.gz 6234574 VCF cf45104c0da7dcbe756dcf8239e1b314 C3N-03226.WXS.N.hg38 3c8cb21b-c84b-48da-b870-d4b941b0b530 -C3N-03233 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03233.filtered.AD.5.noLongINDELS.vcf.gz 5858138 VCF 7bc00656ea8e8f6d7979be5ddfa86cc3 C3N-03233.WXS.N.hg38 735636d7-7006-433a-b81d-203f334f2f80 -C3N-03238 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03238.filtered.AD.5.noLongINDELS.vcf.gz 5533650 VCF a9830c3ed41cbcedae125b92bc8fbc55 C3N-03238.WXS.N.hg38 fd74d144-b936-4a19-a6a9-1af6ca61581c -C3N-03420 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03420.filtered.AD.5.noLongINDELS.vcf.gz 6185650 VCF b0d559050d897f2ec9f98683d8bf603e C3N-03420.WXS.N.hg38 209e6c70-967b-4934-b69b-097f395e9759 +C3N-03233 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03233.filtered.AD.5.noLongINDELS.vcf.gz 5858138 VCF 7bc00656ea8e8f6d7979be5ddfa86cc3 C3N-03233.WXS.N.hg38 735636d7-7006-433a-b81d-203f334f2f80 +C3N-03238 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03238.filtered.AD.5.noLongINDELS.vcf.gz 5533650 VCF a9830c3ed41cbcedae125b92bc8fbc55 C3N-03238.WXS.N.hg38 fd74d144-b936-4a19-a6a9-1af6ca61581c +C3N-03420 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03420.filtered.AD.5.noLongINDELS.vcf.gz 6185650 VCF b0d559050d897f2ec9f98683d8bf603e C3N-03420.WXS.N.hg38 209e6c70-967b-4934-b69b-097f395e9759 C3N-03424 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03424.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-03424.WXS.N.hg38 2abe6156-f924-4cfe-b73a-fa8547091add C3N-03424 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03424.filtered.ROI.AD.5.INDELS.NS.vcf.gz 406633 VCF f984e161dcf0cc8c9627a5181181e1b8 C3N-03424.WXS.N.hg38 2abe6156-f924-4cfe-b73a-fa8547091add C3N-03424 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03424.filtered.AD.5.noLongINDELS.vcf.gz 3794088 VCF ab9147962515dd81d955af20fa209420 C3N-03424.WXS.N.hg38 2abe6156-f924-4cfe-b73a-fa8547091add @@ -1661,10 +1661,10 @@ C3N-03440 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS C3N-03441 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03441.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-03441.WXS.N.hg38 b67c36c7-c280-4ffb-b911-f4f2e1f5a46f C3N-03441 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03441.filtered.ROI.AD.5.INDELS.NS.vcf.gz 417294 VCF 4c3c05873d5fd91a011788813a36cbc8 C3N-03441.WXS.N.hg38 b67c36c7-c280-4ffb-b911-f4f2e1f5a46f C3N-03441 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03441.filtered.AD.5.noLongINDELS.vcf.gz 3996306 VCF b899d61eb1231e4ef4d797b6bfa9004c C3N-03441.WXS.N.hg38 b67c36c7-c280-4ffb-b911-f4f2e1f5a46f -C3N-03448 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03448.filtered.AD.5.noLongINDELS.vcf.gz 6762788 VCF 7223af0b78413fb6c07eb08737c8244a C3N-03448.WXS.N.hg38 d5110845-d1e0-40ec-bb1f-4a579825fd3a -C3N-03449 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03449.filtered.AD.5.noLongINDELS.vcf.gz 6094931 VCF a65d5290ae2007d0228b07e701a12a37 C3N-03449.WXS.N.hg38 e9cc9f57-6994-4632-99c3-b7b44deb2f42 -C3N-03452 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03452.filtered.AD.5.noLongINDELS.vcf.gz 6203299 VCF 3ee351a3cfd17f04d3093c854deff818 C3N-03452.WXS.N.hg38 72713898-819e-4775-b6e7-8e81a8d14e9e -C3N-03453 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03453.filtered.AD.5.noLongINDELS.vcf.gz 6670497 VCF 025ce654112946f4c7f137204bb6457e C3N-03453.WXS.N.hg38 fbef702e-4c4b-439b-84df-4f17c09b025d +C3N-03448 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03448.filtered.AD.5.noLongINDELS.vcf.gz 6762788 VCF 7223af0b78413fb6c07eb08737c8244a C3N-03448.WXS.N.hg38 d5110845-d1e0-40ec-bb1f-4a579825fd3a +C3N-03449 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03449.filtered.AD.5.noLongINDELS.vcf.gz 6094931 VCF a65d5290ae2007d0228b07e701a12a37 C3N-03449.WXS.N.hg38 e9cc9f57-6994-4632-99c3-b7b44deb2f42 +C3N-03452 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03452.filtered.AD.5.noLongINDELS.vcf.gz 6203299 VCF 3ee351a3cfd17f04d3093c854deff818 C3N-03452.WXS.N.hg38 72713898-819e-4775-b6e7-8e81a8d14e9e +C3N-03453 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03453.filtered.AD.5.noLongINDELS.vcf.gz 6670497 VCF 025ce654112946f4c7f137204bb6457e C3N-03453.WXS.N.hg38 fbef702e-4c4b-439b-84df-4f17c09b025d C3N-03456 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03456.filtered.ROI.AD.5.INDELS.NS.vcf.gz 669485 VCF f1080674656fd9b124c4027a11e61629 C3N-03456.WXS.N.hg38 6b489bea-2192-48d0-a36e-b9a10f6cfad6 C3N-03456 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03456.filtered.AD.5.noLongINDELS.vcf.gz 6216302 VCF ca1eb6d0231b366ce32951b7cea2ee56 C3N-03456.WXS.N.hg38 6b489bea-2192-48d0-a36e-b9a10f6cfad6 C3N-03457 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03457.filtered.ROI.AD.5.INDELS.NS.vcf.gz 698474 VCF 7b47e130c6c12981dc9fe4eb5123783f C3N-03457.WXS.N.hg38 c7aabc26-8d4f-494f-a28c-7709a79cf2c6 @@ -1673,8 +1673,8 @@ C3N-03458 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSC C3N-03458 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03458.filtered.AD.5.noLongINDELS.vcf.gz 5961971 VCF 6ce2e1412b4a4318cc9c9b6da68b16d2 C3N-03458.WXS.N.hg38 020efae6-7be3-43a3-9e6a-2b51324b1098 C3N-03473 GBM WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03473.filtered.ROI.AD.5.INDELS.NS.vcf.gz 687605 VCF 0675533f57646434890434ffe35375a6 C3N-03473.WXS.N.hg38 64124d13-411c-4ac8-b0cf-cb0f66bdb020 C3N-03473 GBM WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03473.filtered.AD.5.noLongINDELS.vcf.gz 6113445 VCF 819dfb3f3f8877ccc3a21a03ebd84673 C3N-03473.WXS.N.hg38 64124d13-411c-4ac8-b0cf-cb0f66bdb020 -C3N-03480 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03480.filtered.AD.5.noLongINDELS.vcf.gz 6523192 VCF 0eb5f78f98742077568318f6cb3f0430 C3N-03480.WXS.N.hg38 4fdb16b2-c34d-44b2-a6d9-cd660db8048a -C3N-03484 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03484.filtered.AD.5.noLongINDELS.vcf.gz 6427591 VCF deb3f2c5ac962c5522bde185238889c5 C3N-03484.WXS.N.hg38 0fa3081f-5444-4293-a0b7-ec0010a27be4 +C3N-03480 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03480.filtered.AD.5.noLongINDELS.vcf.gz 6523192 VCF 0eb5f78f98742077568318f6cb3f0430 C3N-03480.WXS.N.hg38 4fdb16b2-c34d-44b2-a6d9-cd660db8048a +C3N-03484 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03484.filtered.AD.5.noLongINDELS.vcf.gz 6427591 VCF deb3f2c5ac962c5522bde185238889c5 C3N-03484.WXS.N.hg38 0fa3081f-5444-4293-a0b7-ec0010a27be4 C3N-03486 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03486.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-03486.WXS.N.hg38 84051ecf-2e64-43bc-8528-237b961f9c46 C3N-03486 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03486.filtered.ROI.AD.5.INDELS.NS.vcf.gz 426760 VCF 0f5ae5ada487c4997f9c34e27ae469b5 C3N-03486.WXS.N.hg38 84051ecf-2e64-43bc-8528-237b961f9c46 C3N-03486 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03486.filtered.AD.5.noLongINDELS.vcf.gz 3975864 VCF 4be88725d6b1f6173197b51c04c6ef55 C3N-03486.WXS.N.hg38 84051ecf-2e64-43bc-8528-237b961f9c46 @@ -1703,11 +1703,11 @@ C3N-03670 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_ C3N-03670 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03670.filtered.AD.5.noLongINDELS.vcf.gz 6411124 VCF 7dff458540fe3b95d9583131c721042e C3N-03670.WXS.N.hg38 3bf6cf4c-6846-4ed1-9608-df4f1f1b7186 C3N-03754 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03754.filtered.ROI.AD.5.INDELS.NS.vcf.gz 685122 VCF 05722c9e07515c43b5f920e3b4a4b652 C3N-03754.WXS.N.hg38 6528bc4d-bfc6-4e68-b458-61d76d4cb21c C3N-03754 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03754.filtered.AD.5.noLongINDELS.vcf.gz 6749001 VCF bfaea66fe4ca2ac68bc4a1709a82f530 C3N-03754.WXS.N.hg38 6528bc4d-bfc6-4e68-b458-61d76d4cb21c -C3N-03755 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03755.filtered.AD.5.noLongINDELS.vcf.gz 6397893 VCF b3777dced074596aad9582005a50b5e0 C3N-03755.WXS.N.hg38 46385935-1b35-415e-86f3-09448db274f3 -C3N-03756 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03756.filtered.AD.5.noLongINDELS.vcf.gz 5550456 VCF 053b0a2845bf5a3a18c467b538023dc7 C3N-03756.WXS.N.hg38 55625e73-b970-4eed-a670-24a1338b7427 -C3N-03757 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03757.filtered.AD.5.noLongINDELS.vcf.gz 6530614 VCF a4e177749af647f37c392af09b404a55 C3N-03757.WXS.N.hg38 bc78ea1b-1673-4776-a7b8-93d09d7234dd -C3N-03764 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03764.filtered.AD.5.noLongINDELS.vcf.gz 7122546 VCF a00713de1cbfce7310079a66ba4df8f1 C3N-03764.WXS.N.hg38 4fa6d887-632a-4f1c-9762-52785e4cd303 -C3N-03765 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03765.filtered.AD.5.noLongINDELS.vcf.gz 7060021 VCF 9b81b1321e258c265ec4d1634faf475d C3N-03765.WXS.N.hg38 3685a804-d037-4f73-a373-1e3d88966c3b +C3N-03755 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03755.filtered.AD.5.noLongINDELS.vcf.gz 6397893 VCF b3777dced074596aad9582005a50b5e0 C3N-03755.WXS.N.hg38 46385935-1b35-415e-86f3-09448db274f3 +C3N-03756 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03756.filtered.AD.5.noLongINDELS.vcf.gz 5550456 VCF 053b0a2845bf5a3a18c467b538023dc7 C3N-03756.WXS.N.hg38 55625e73-b970-4eed-a670-24a1338b7427 +C3N-03757 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03757.filtered.AD.5.noLongINDELS.vcf.gz 6530614 VCF a4e177749af647f37c392af09b404a55 C3N-03757.WXS.N.hg38 bc78ea1b-1673-4776-a7b8-93d09d7234dd +C3N-03764 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03764.filtered.AD.5.noLongINDELS.vcf.gz 7122546 VCF a00713de1cbfce7310079a66ba4df8f1 C3N-03764.WXS.N.hg38 4fa6d887-632a-4f1c-9762-52785e4cd303 +C3N-03765 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03765.filtered.AD.5.noLongINDELS.vcf.gz 7060021 VCF 9b81b1321e258c265ec4d1634faf475d C3N-03765.WXS.N.hg38 3685a804-d037-4f73-a373-1e3d88966c3b C3N-03780 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03780.filtered.ROI.AD.5.INDELS.NS.vcf.gz 681968 VCF de4abbfa7613c38f13c75d044aeaee36 C3N-03780.WXS.N.hg38 ccde5b40-05a2-43a4-80cc-cc7bc89ca06f C3N-03780 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03780.filtered.AD.5.noLongINDELS.vcf.gz 6737097 VCF 822c12aeb241e6a1e104c7ba69cb9756 C3N-03780.WXS.N.hg38 ccde5b40-05a2-43a4-80cc-cc7bc89ca06f C3N-03781 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03781.filtered.ROI.AD.5.INDELS.NS.vcf.gz 688061 VCF 22a8ce4379200b14457e45c4c7bfce4f C3N-03781.WXS.N.hg38 aeb702f9-6c45-440f-820b-b8f1d71320c5 @@ -1718,12 +1718,12 @@ C3N-03783 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSC C3N-03783 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03783.filtered.AD.5.noLongINDELS.vcf.gz 5804791 VCF 280562b3ee37e423c4c4a7e9eff55676 C3N-03783.WXS.N.hg38 7592f753-b411-41c6-8abc-1964e70eb1d4 C3N-03785 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03785.filtered.ROI.AD.5.INDELS.NS.vcf.gz 670228 VCF f239d84acd03ee7460579909afa219ab C3N-03785.WXS.N.hg38 215dc24d-7f8b-4bb7-b7c2-4c25980ff0c0 C3N-03785 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03785.filtered.AD.5.noLongINDELS.vcf.gz 6570143 VCF e9a25649d2d799f92cefb44a33160f62 C3N-03785.WXS.N.hg38 215dc24d-7f8b-4bb7-b7c2-4c25980ff0c0 -C3N-03789 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03789.filtered.AD.5.noLongINDELS.vcf.gz 6026180 VCF f056903f7f3d4165d55a4ad18c989af7 C3N-03789.WXS.N.hg38 502434e4-f053-44d4-b480-d40873a0c659 -C3N-03791 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03791.filtered.AD.5.noLongINDELS.vcf.gz 7522098 VCF 23de0319426c338c65eaf4d1bd117025 C3N-03791.WXS.N.hg38 16b1732d-19aa-4414-a010-261a7c7295d1 -C3N-03797 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03797.filtered.AD.5.noLongINDELS.vcf.gz 7177527 VCF 0795e1e4df8024b77828327053335ead C3N-03797.WXS.N.hg38 d6247145-875d-4914-adf0-8b436ca75f7a -C3N-03800 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03800.filtered.AD.5.noLongINDELS.vcf.gz 7655365 VCF 97737c7c82cec5b7ebea8e14365cac16 C3N-03800.WXS.N.hg38 ca9914cc-5a12-4203-9c17-2de3a52076c9 -C3N-03802 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03802.filtered.AD.5.noLongINDELS.vcf.gz 7881114 VCF d475d2fe2c8d72b88dc56da0f2691116 C3N-03802.WXS.N.hg38 873a455c-8270-4254-8033-313e94158f63 -C3N-03810 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03810.filtered.AD.5.noLongINDELS.vcf.gz 6936737 VCF 0653e7d43112fcff4364b61f7045a984 C3N-03810.WXS.N.hg38 b4157794-616f-4717-8a72-45784b5619d4 +C3N-03789 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03789.filtered.AD.5.noLongINDELS.vcf.gz 6026180 VCF f056903f7f3d4165d55a4ad18c989af7 C3N-03789.WXS.N.hg38 502434e4-f053-44d4-b480-d40873a0c659 +C3N-03791 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03791.filtered.AD.5.noLongINDELS.vcf.gz 7522098 VCF 23de0319426c338c65eaf4d1bd117025 C3N-03791.WXS.N.hg38 16b1732d-19aa-4414-a010-261a7c7295d1 +C3N-03797 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03797.filtered.AD.5.noLongINDELS.vcf.gz 7177527 VCF 0795e1e4df8024b77828327053335ead C3N-03797.WXS.N.hg38 d6247145-875d-4914-adf0-8b436ca75f7a +C3N-03800 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03800.filtered.AD.5.noLongINDELS.vcf.gz 7655365 VCF 97737c7c82cec5b7ebea8e14365cac16 C3N-03800.WXS.N.hg38 ca9914cc-5a12-4203-9c17-2de3a52076c9 +C3N-03802 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03802.filtered.AD.5.noLongINDELS.vcf.gz 7881114 VCF d475d2fe2c8d72b88dc56da0f2691116 C3N-03802.WXS.N.hg38 873a455c-8270-4254-8033-313e94158f63 +C3N-03810 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03810.filtered.AD.5.noLongINDELS.vcf.gz 6936737 VCF 0653e7d43112fcff4364b61f7045a984 C3N-03810.WXS.N.hg38 b4157794-616f-4717-8a72-45784b5619d4 C3N-03837 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03837.filtered.ROI.AD.5.INDELS.NS.vcf.gz 687033 VCF b3524042303a64e2ed6ad9c3d663a242 C3N-03837.WXS.N.hg38 79f45856-ff0f-4b5c-a361-082cd8784e7b C3N-03837 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03837.filtered.AD.5.noLongINDELS.vcf.gz 8021032 VCF 314290f84ca41ecfe20f358afdb70dd5 C3N-03837.WXS.N.hg38 79f45856-ff0f-4b5c-a361-082cd8784e7b C3N-03839 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03839.filtered.ROI.AD.5.INDELS.NS.vcf.gz 694439 VCF eabeee74cfd38f4d37ef0b4466fac4ee C3N-03839.WXS.N.hg38 714e1407-3f82-466a-86bf-85ecdf3aae45 @@ -1767,22 +1767,22 @@ C3N-03888 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSC C3N-03888 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03888.filtered.AD.5.noLongINDELS.vcf.gz 7696172 VCF 60d69f2b65b76c0d383cfb0273c74a88 C3N-03888.WXS.N.hg38.high_cov 6abded9f-d254-48c6-ba93-bc873d7957d4 C3N-03889 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03889.filtered.ROI.AD.5.INDELS.NS.vcf.gz 731500 VCF 807d3c7237c01159f938f7f078aef894 C3N-03889.WXS.N.hg38 d0d41824-27f6-49f0-afe2-5b8b74594d7b C3N-03889 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03889.filtered.AD.5.noLongINDELS.vcf.gz 7841625 VCF 931fa126fcb83c279042261b9521d2d1 C3N-03889.WXS.N.hg38 d0d41824-27f6-49f0-afe2-5b8b74594d7b -C3N-03890 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03890.filtered.AD.5.noLongINDELS.vcf.gz 7141196 VCF a1264a5791481c2a541298f88849f446 C3N-03890.WXS.N.hg38 4dc0daaf-2a6d-4918-9f70-5592541eb194 -C3N-03911 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03911.filtered.AD.5.noLongINDELS.vcf.gz 6548704 VCF d463f79b4750ce2a0f56f25895089a3e C3N-03911.WXS.N.hg38 9c23156c-40b6-490b-a21f-6af4d6646f89 -C3N-03921 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03921.filtered.AD.5.noLongINDELS.vcf.gz 6858489 VCF 9dd05a32a004603ffdc14c00a53faa01 C3N-03921.WXS.N.hg38 9a4642cf-f64a-4d95-9593-2dbeb3aeca4d +C3N-03890 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03890.filtered.AD.5.noLongINDELS.vcf.gz 7141196 VCF a1264a5791481c2a541298f88849f446 C3N-03890.WXS.N.hg38 4dc0daaf-2a6d-4918-9f70-5592541eb194 +C3N-03911 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03911.filtered.AD.5.noLongINDELS.vcf.gz 6548704 VCF d463f79b4750ce2a0f56f25895089a3e C3N-03911.WXS.N.hg38 9c23156c-40b6-490b-a21f-6af4d6646f89 +C3N-03921 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03921.filtered.AD.5.noLongINDELS.vcf.gz 6858489 VCF 9dd05a32a004603ffdc14c00a53faa01 C3N-03921.WXS.N.hg38 9a4642cf-f64a-4d95-9593-2dbeb3aeca4d C3N-03928 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03928.filtered.ROI.AD.5.INDELS.NS.vcf.gz 674283 VCF af7227d25e04b0513441990159f5cba0 C3N-03928.WXS.N.hg38 889badd3-da9b-4f72-8682-a2cca8f38106 C3N-03928 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03928.filtered.AD.5.noLongINDELS.vcf.gz 6262258 VCF a6eef7130b0620065e3f08dcd4fbee4c C3N-03928.WXS.N.hg38 889badd3-da9b-4f72-8682-a2cca8f38106 -C3N-03929 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03929.filtered.AD.5.noLongINDELS.vcf.gz 6444280 VCF 5f395d500360c9d2d1fefbef73d7a7f4 C3N-03929.WXS.N.hg38 e07a1156-b814-47cd-8e18-e8624e1dab2f +C3N-03929 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03929.filtered.AD.5.noLongINDELS.vcf.gz 6444280 VCF 5f395d500360c9d2d1fefbef73d7a7f4 C3N-03929.WXS.N.hg38 e07a1156-b814-47cd-8e18-e8624e1dab2f C3N-03933 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-03933.filtered.ROI.AD.5.INDELS.NS.vcf.gz 702722 VCF 46272b242195c81c8b65333143caaabf C3N-03933.WXS.N.hg38 3e3307a5-dc02-49fa-93bc-840e169947ca C3N-03933 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-03933.filtered.AD.5.noLongINDELS.vcf.gz 7099763 VCF f4f5914547d8ccef3bd27880ca39ea4f C3N-03933.WXS.N.hg38 3e3307a5-dc02-49fa-93bc-840e169947ca -C3N-03935 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03935.filtered.AD.5.noLongINDELS.vcf.gz 7385445 VCF fc8ac40d5e39fb11c07fc5635e7acc09 C3N-03935.WXS.N.hg38 aff2f741-3432-47fc-a21a-121927b7e96c -C3N-03939 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03939.filtered.AD.5.noLongINDELS.vcf.gz 6442050 VCF d58d4d10691fc94d9e7e6284996d9be1 C3N-03939.WXS.N.hg38 96c5d2ef-106f-4362-a6c4-49724e0abe80 -C3N-04092 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04092.filtered.AD.5.noLongINDELS.vcf.gz 6253717 VCF d60684bf28a559c993d0bde08def333a C3N-04092.WXS.N.hg38 bf40953c-253a-4b01-afd9-04ad79976e45 -C3N-04094 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04094.filtered.AD.5.noLongINDELS.vcf.gz 5612748 VCF 5fe86e93c53c2056b2da9aabc3d8ce7d C3N-04094.WXS.N.hg38 30918018-bf91-418f-9d9f-b7d873524ee0 -C3N-04097 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04097.filtered.AD.5.noLongINDELS.vcf.gz 7157945 VCF a8158551d21134c2c2ccbf78764008da C3N-04097.WXS.N.hg38 f9e2e52a-6327-4053-8262-66ca49ec97ee -C3N-04098 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04098.filtered.AD.5.noLongINDELS.vcf.gz 6116403 VCF 20910992940bc5b69fb7de8d3d832d25 C3N-04098.WXS.N.hg38 33f39ddb-4185-4905-81a6-52c9429067cc -C3N-04100 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04100.filtered.AD.5.noLongINDELS.vcf.gz 7186766 VCF 19d0f756202f06b4a52b3f9763fbe85d C3N-04100.WXS.N.hg38 7c20addd-92b7-436e-b8c7-0e202439e2eb -C3N-04113 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04113.filtered.AD.5.noLongINDELS.vcf.gz 6284148 VCF aacc9cf137d4a6b3a04ec9fee710f5cf C3N-04113.WXS.N.hg38 a4e8f80c-7798-4472-9e9d-8a6cb4bfe9c5 +C3N-03935 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03935.filtered.AD.5.noLongINDELS.vcf.gz 7385445 VCF fc8ac40d5e39fb11c07fc5635e7acc09 C3N-03935.WXS.N.hg38 aff2f741-3432-47fc-a21a-121927b7e96c +C3N-03939 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-03939.filtered.AD.5.noLongINDELS.vcf.gz 6442050 VCF d58d4d10691fc94d9e7e6284996d9be1 C3N-03939.WXS.N.hg38 96c5d2ef-106f-4362-a6c4-49724e0abe80 +C3N-04092 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04092.filtered.AD.5.noLongINDELS.vcf.gz 6253717 VCF d60684bf28a559c993d0bde08def333a C3N-04092.WXS.N.hg38 bf40953c-253a-4b01-afd9-04ad79976e45 +C3N-04094 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04094.filtered.AD.5.noLongINDELS.vcf.gz 5612748 VCF 5fe86e93c53c2056b2da9aabc3d8ce7d C3N-04094.WXS.N.hg38 30918018-bf91-418f-9d9f-b7d873524ee0 +C3N-04097 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04097.filtered.AD.5.noLongINDELS.vcf.gz 7157945 VCF a8158551d21134c2c2ccbf78764008da C3N-04097.WXS.N.hg38 f9e2e52a-6327-4053-8262-66ca49ec97ee +C3N-04098 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04098.filtered.AD.5.noLongINDELS.vcf.gz 6116403 VCF 20910992940bc5b69fb7de8d3d832d25 C3N-04098.WXS.N.hg38 33f39ddb-4185-4905-81a6-52c9429067cc +C3N-04100 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04100.filtered.AD.5.noLongINDELS.vcf.gz 7186766 VCF 19d0f756202f06b4a52b3f9763fbe85d C3N-04100.WXS.N.hg38 7c20addd-92b7-436e-b8c7-0e202439e2eb +C3N-04113 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04113.filtered.AD.5.noLongINDELS.vcf.gz 6284148 VCF aacc9cf137d4a6b3a04ec9fee710f5cf C3N-04113.WXS.N.hg38 a4e8f80c-7798-4472-9e9d-8a6cb4bfe9c5 C3N-04119 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-04119.filtered.ROI.AD.5.INDELS.NS.vcf.gz 685980 VCF 12717fcfa1957db53a273fb60e0715e2 C3N-04119.WXS.N.hg38 abfd8f03-72a2-4d88-8b24-8f41d6b4ff7a C3N-04119 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-04119.filtered.AD.5.noLongINDELS.vcf.gz 6427061 VCF 7650869864cc7dedfe374b23ca4d60af C3N-04119.WXS.N.hg38 abfd8f03-72a2-4d88-8b24-8f41d6b4ff7a C3N-04124 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-04124.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-04124.WXS.N.hg38 45bbd6b6-b949-43fa-a5be-5eaf426405b6 @@ -1798,14 +1798,14 @@ C3N-04152 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNS C3N-04155 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-04155.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-04155.WXS.N.hg38 e178ecd2-6264-4ec0-bc22-2c22db576e5f C3N-04155 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-04155.filtered.ROI.AD.5.INDELS.NS.vcf.gz 420626 VCF c2b95a06a315493b7e6d0712db0a2ade C3N-04155.WXS.N.hg38 e178ecd2-6264-4ec0-bc22-2c22db576e5f C3N-04155 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-04155.filtered.AD.5.noLongINDELS.vcf.gz 4334394 VCF 79c6c5f50748d6a92870ce640bae08f1 C3N-04155.WXS.N.hg38 e178ecd2-6264-4ec0-bc22-2c22db576e5f -C3N-04157 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04157.filtered.AD.5.noLongINDELS.vcf.gz 6863385 VCF 25f3ce214dba3703643762c215639cc9 C3N-04157.WXS.N.hg38 d9a75f24-d422-459c-af8a-a9d8fff4cb16 +C3N-04157 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04157.filtered.AD.5.noLongINDELS.vcf.gz 6863385 VCF 25f3ce214dba3703643762c215639cc9 C3N-04157.WXS.N.hg38 d9a75f24-d422-459c-af8a-a9d8fff4cb16 C3N-04162 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-04162.filtered.ROI.AD.5.INDELS.NS.vcf.gz 20 VCF 576800e9231cc9fd9d1346e3fa80ca54 C3N-04162.WXS.N.hg38 eeacb63b-2483-49da-95e6-e431a56887bb C3N-04162 LSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-04162.filtered.ROI.AD.5.INDELS.NS.vcf.gz 407020 VCF 456cb8a5bb7a3e8117cdf5b33ebb5f2b C3N-04162.WXS.N.hg38 eeacb63b-2483-49da-95e6-e431a56887bb C3N-04162 LSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-04162.filtered.AD.5.noLongINDELS.vcf.gz 3794819 VCF 21802cb4f1863e876ebf9a55e25a8b60 C3N-04162.WXS.N.hg38 eeacb63b-2483-49da-95e6-e431a56887bb -C3N-04168 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04168.filtered.AD.5.noLongINDELS.vcf.gz 6698651 VCF f36b2f8c47e86502c47640f2b8bf6b9e C3N-04168.WXS.N.hg38 c9ef3258-4a3c-4806-ba80-7b237e65fdec -C3N-04173 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04173.filtered.AD.5.noLongINDELS.vcf.gz 6742727 VCF eec7076d7f739740922f0b162a3bf53d C3N-04173.WXS.N.hg38 8101f62f-fc6a-46f7-9827-579557d45213 -C3N-04176 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04176.filtered.AD.5.noLongINDELS.vcf.gz 6834047 VCF 9cf3e16f8c6e11aa010abafcf33e1443 C3N-04176.WXS.N.hg38 ed33f478-7371-444c-8674-90638c03d813 -C3N-04180 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04180.filtered.AD.5.noLongINDELS.vcf.gz 7006478 VCF c87f97c0a2e715b7c7e2706b84b8f995 C3N-04180.WXS.N.hg38 f4033489-bfd0-4e49-bc9f-7adb5a397614 +C3N-04168 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04168.filtered.AD.5.noLongINDELS.vcf.gz 6698651 VCF f36b2f8c47e86502c47640f2b8bf6b9e C3N-04168.WXS.N.hg38 c9ef3258-4a3c-4806-ba80-7b237e65fdec +C3N-04173 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04173.filtered.AD.5.noLongINDELS.vcf.gz 6742727 VCF eec7076d7f739740922f0b162a3bf53d C3N-04173.WXS.N.hg38 8101f62f-fc6a-46f7-9827-579557d45213 +C3N-04176 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04176.filtered.AD.5.noLongINDELS.vcf.gz 6834047 VCF 9cf3e16f8c6e11aa010abafcf33e1443 C3N-04176.WXS.N.hg38 ed33f478-7371-444c-8674-90638c03d813 +C3N-04180 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04180.filtered.AD.5.noLongINDELS.vcf.gz 7006478 VCF c87f97c0a2e715b7c7e2706b84b8f995 C3N-04180.WXS.N.hg38 f4033489-bfd0-4e49-bc9f-7adb5a397614 C3N-04273 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-04273.filtered.ROI.AD.5.INDELS.NS.vcf.gz 715815 VCF 3f3942f22d5f3551e7b37c883a1720e2 C3N-04273.WXS.N.hg38.high_cov b805f18c-cd4b-45e7-8906-ff4b6892101b C3N-04273 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-04273.filtered.AD.5.noLongINDELS.vcf.gz 7245267 VCF f1a1003b74fc2666619cc71253cee195 C3N-04273.WXS.N.hg38.high_cov b805f18c-cd4b-45e7-8906-ff4b6892101b C3N-04275 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-04275.filtered.ROI.AD.5.INDELS.NS.vcf.gz 676336 VCF b999adb796149eac1dff758c51f6d793 C3N-04275.WXS.N.hg38 27f52cd1-5d8b-441c-80ab-c6bf1629f770 @@ -1826,11 +1826,11 @@ C3N-04283 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_ C3N-04283 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-04283.filtered.AD.5.noLongINDELS.vcf.gz 6888137 VCF b76a50f028803c1ee1d1f7facf8672ca C3N-04283.WXS.N.hg38 bcc86397-2e8b-4ef5-8fa7-3f220f311398 C3N-04284 PDA WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-04284.filtered.ROI.AD.5.INDELS.NS.vcf.gz 681100 VCF b7e8b42cd2eff0dafec910f2cf45015f C3N-04284.WXS.N.hg38 dad34357-4344-40ce-b9e5-794565a9c387 C3N-04284 PDA WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/PDA/CPTAC3_PDA_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-04284.filtered.AD.5.noLongINDELS.vcf.gz 5969401 VCF 4ed55e0fb13d72a760ef5f12a0a3a3f1 C3N-04284.WXS.N.hg38 dad34357-4344-40ce-b9e5-794565a9c387 -C3N-04312 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04312.filtered.AD.5.noLongINDELS.vcf.gz 6057408 VCF 7a8c1cba7d15b7aa0450f9ffb6a7defe C3N-04312.WXS.N.hg38 8261bf69-e50f-4985-a7ff-67a826adb3b2 -C3N-04382 LUAD WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04382.filtered.AD.5.noLongINDELS.vcf.gz 6675998 VCF 36b163b6508cf7038e0a8a696f5ba427 C3N-04382.WXS.N.hg38 b657a5d9-35ed-45fa-aef5-066449dd2031 +C3N-04312 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04312.filtered.AD.5.noLongINDELS.vcf.gz 6057408 VCF 7a8c1cba7d15b7aa0450f9ffb6a7defe C3N-04312.WXS.N.hg38 8261bf69-e50f-4985-a7ff-67a826adb3b2 +C3N-04382 LUAD WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04382.filtered.AD.5.noLongINDELS.vcf.gz 6675998 VCF 36b163b6508cf7038e0a8a696f5ba427 C3N-04382.WXS.N.hg38 b657a5d9-35ed-45fa-aef5-066449dd2031 C3N-04611 HNSCC WXS_Germline v1.1 20201209 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1_Germline_WXS.779_20201209/C3N-04611.filtered.ROI.AD.5.INDELS.NS.vcf.gz 703657 VCF 343b7da3ff87dd48fd59d4dc12788421 C3N-04611.WXS.N.hg38 69532970-7481-4510-b2fb-e40068fe9423 C3N-04611 HNSCC WXS_Germline v1.1b 20210127 Y3 /CPTAC3.Y3_WashU/HNSCC/CPTAC3_HNSCC_WXS_Germline_v1.1b_WXS_779.v1.1b_20210127/C3N-04611.filtered.AD.5.noLongINDELS.vcf.gz 7820312 VCF 6fe946bc8a1c836e3ebe13cf0ee41676 C3N-04611.WXS.N.hg38 69532970-7481-4510-b2fb-e40068fe9423 -C3N-04683 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04683.filtered.AD.5.noLongINDELS.vcf.gz 6363178 VCF 690672e656db54939982612da7c84302 C3N-04683.WXS.N.hg38 4cd843ae-9cf6-4d57-84d1-d569c1e95ddf -C3N-04686 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04686.filtered.AD.5.noLongINDELS.vcf.gz 7168332 VCF 1161aa27f7be045d3470390612f09e51 C3N-04686.WXS.N.hg38 f98cea6a-c974-4fb9-ab2d-fdd17f6e0cf8 -C3N-04691 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04691.filtered.AD.5.noLongINDELS.vcf.gz 6741931 VCF aa4b3fb04d5c401137e8d81cc55e2824 C3N-04691.WXS.N.hg38 c29cd23d-cb0e-4e1a-a99d-d9a5d277f5e3 -C3N-04693 GBM WXS_Germline v1.1 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04693.filtered.AD.5.noLongINDELS.vcf.gz 6530463 VCF 490bd86a1b5e0c6f7a846acdd03190cf C3N-04693.WXS.N.hg38 6fb6bf47-d501-4858-ba49-6e2cd516474a +C3N-04683 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04683.filtered.AD.5.noLongINDELS.vcf.gz 6363178 VCF 690672e656db54939982612da7c84302 C3N-04683.WXS.N.hg38 4cd843ae-9cf6-4d57-84d1-d569c1e95ddf +C3N-04686 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04686.filtered.AD.5.noLongINDELS.vcf.gz 7168332 VCF 1161aa27f7be045d3470390612f09e51 C3N-04686.WXS.N.hg38 f98cea6a-c974-4fb9-ab2d-fdd17f6e0cf8 +C3N-04691 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04691.filtered.AD.5.noLongINDELS.vcf.gz 6741931 VCF aa4b3fb04d5c401137e8d81cc55e2824 C3N-04691.WXS.N.hg38 c29cd23d-cb0e-4e1a-a99d-d9a5d277f5e3 +C3N-04693 GBM WXS_Germline v1.1b 20210415 Y3 /CPTAC3.Y3_WashU/GBM/CPTAC3_GBM_WXS_Germline_v1.1_LUAD_GBM_Confirmatory_20210415/C3N-04693.filtered.AD.5.noLongINDELS.vcf.gz 6530463 VCF 490bd86a1b5e0c6f7a846acdd03190cf C3N-04693.WXS.N.hg38 6fb6bf47-d501-4858-ba49-6e2cd516474a