From c41023e80e6fbc96596dfd449e07ceea3adf7c98 Mon Sep 17 00:00:00 2001 From: "Matthew A. Wyczalkowski" Date: Tue, 3 Jan 2023 10:50:25 -0600 Subject: [PATCH] Upload of WGS_SomaticSV results * Batch name: 20230103.SomaticSV.CPTAC3_14 * Note that the batch name is incorrectly defined during upload, resulting in an inconsistent directory name, "CPTAC3_AML_WGS_SV_v1.2.1_2020-02-25_PDA_20200312" * This does not affect results * Upload dir: /storage1/fs1/dinglab/Active/Projects/CPTAC3/Common/CPTAC3-DCC-Staging/staged_data.2020-02-25_PDA.20200312 --- .../WGS_SV.DCC_analysis_summary.dat | 14 ++++++++++++++ 1 file changed, 14 insertions(+) diff --git a/DCC_Analysis_Summary/WGS_SV.DCC_analysis_summary.dat b/DCC_Analysis_Summary/WGS_SV.DCC_analysis_summary.dat index 9e0726f..cc78ebe 100644 --- a/DCC_Analysis_Summary/WGS_SV.DCC_analysis_summary.dat +++ b/DCC_Analysis_Summary/WGS_SV.DCC_analysis_summary.dat @@ -659,6 +659,7 @@ C3L-01288 CCRCC WGS_SV v1.1 20200813 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_WGS_ C3L-01291 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-01291.evidence_0.b6a573c2-ac71-49ff-b6d8-37af02a19190_wgs_gdc_realn.bam 42514939 BAM dfc8ca5e64a41de1e44d32ff881a556e C3L-01291.WGS.Tbm.hg38 1a5442a8-1e85-42b4-912f-93073a8b589a C3L-01291.WGS.Nbc.hg38 64af057d-dddd-4424-910c-d04e4aa2254e 1a713327-6f43-43ac-a535-713cda77230e C3L-01291 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-01291.evidence_1.3705c530-4e59-4f9d-8670-937aea579564_wgs_gdc_realn.bam 43176702 BAM c41da5a931d43f2f0d966043971b7888 C3L-01291.WGS.Tbm.hg38 1a5442a8-1e85-42b4-912f-93073a8b589a C3L-01291.WGS.Nbc.hg38 64af057d-dddd-4424-910c-d04e4aa2254e 1a713327-6f43-43ac-a535-713cda77230e C3L-01291 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-01291.final.SV.WGS.vcf 146472 VCF e2d8b8f0b718f405cb7f29a804a61a3b C3L-01291.WGS.Tbm.hg38 1a5442a8-1e85-42b4-912f-93073a8b589a C3L-01291.WGS.Nbc.hg38 64af057d-dddd-4424-910c-d04e4aa2254e 1a713327-6f43-43ac-a535-713cda77230e +C3L-01295 AML WGS_SV v1.2.1 20200312 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2.1_2020-02-25_PDA_20200312/C3L-01295.ALQ_d0a6dc5e.final.SV.WGS.vcf 149598 VCF 12e66ef331839f0af1ab78b23a3d5de1 C3L-01295.WGS.Tbm.hg38 89be8230-404f-41ec-8b81-c223f12201bd C3L-01295.WGS.Nbc.hg38 c224d7f9-818d-4419-bfcc-ba20830a688d c4a28bd7-55ef-4ba5-8981-f2042010dc56 C3L-01295 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-01295.evidence_0.d594d3a4-c362-45a5-9283-92b99a78469d_wgs_gdc_realn.bam 29080365 BAM 09c4d690a2c4bf63cc6fddba858a6050 C3L-01295.WGS.Tbm.hg38 5d51ea11-528e-49dc-8ffd-d1b6f4d15a59 C3L-01295.WGS.Nbc.hg38 c224d7f9-818d-4419-bfcc-ba20830a688d 51a1a5c3-f662-4013-9708-45a702cf91b0 C3L-01295 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-01295.evidence_1.fc805067-c5dc-4e24-85cc-f584a58b2728_wgs_gdc_realn.bam 4804701 BAM 4613c270214ef1267f0024ac707a79b7 C3L-01295.WGS.Tbm.hg38 5d51ea11-528e-49dc-8ffd-d1b6f4d15a59 C3L-01295.WGS.Nbc.hg38 c224d7f9-818d-4419-bfcc-ba20830a688d 51a1a5c3-f662-4013-9708-45a702cf91b0 C3L-01295 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-01295.final.SV.WGS.vcf 153994 VCF d90c0c28b95c25c3f42c021cc4aa6054 C3L-01295.WGS.Tbm.hg38 5d51ea11-528e-49dc-8ffd-d1b6f4d15a59 C3L-01295.WGS.Nbc.hg38 c224d7f9-818d-4419-bfcc-ba20830a688d 51a1a5c3-f662-4013-9708-45a702cf91b0 @@ -796,6 +797,7 @@ C3L-01683 LUAD WGS_SV v0.1.2 20181218 Y1 /CPTAC3_WashU_hg38/LUAD/WGS_SV.LUAD.b56 C3L-01687 PDA WGS_SV v1.0 20190529 Y2 /CPTAC3.Y2_WashU/PDA/CPTAC3_PDA_WGS_SV_v1.0_Y2.b2_20190529/C3L-01687.final.SV.WGS.vcf.gz 20004 VCF 44ad9cf38878cc66c397af4ea8452032 C3L-01687.WGS.T.hg38 fb2c5c36-3522-435b-956e-5a141c175fa8 C3L-01687.WGS.N.hg38 1f705ea1-bfc3-4ef4-9471-861e4105d2cd C3L-01689 PDA WGS_SV v1.0 20190529 Y2 /CPTAC3.Y2_WashU/PDA/CPTAC3_PDA_WGS_SV_v1.0_Y2.b2_20190529/C3L-01689.final.SV.WGS.vcf.gz 20754 VCF 11a86ad02a304495389544c9391ac51d C3L-01689.WGS.T.hg38 7e8efdd4-7fad-4e46-aa74-5e1bf4b2f149 C3L-01689.WGS.N.hg38 e39d2edb-7a85-49c1-bafd-9ed460b73941 C3L-01694 AML WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/AML/CPTAC3_AML_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-01694.final.SV.WGS.vcf 146320 VCF b517dbbb7b86d7a9f62754e33526f683 C3L-01694.WGS.Tpb.hg38 98a43f31-aa70-4a90-aad4-4f12a5fad7ab C3L-01694.WGS.Nbc.hg38 f0e9d729-028a-44d1-938a-8c48e13b96da ca1253f0-be71-42e9-aff7-82b08efe009f +C3L-01696 AML WGS_SV v1.2.1 20200312 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2.1_2020-02-25_PDA_20200312/C3L-01696.ALQ_c9dfeeef.final.SV.WGS.vcf 151744 VCF 93093d87534abccd60dbdf70329aa3fb C3L-01696.WGS.Tbm.hg38 30772786-a9c8-40f0-b5c8-1853d6bd440b C3L-01696.WGS.Nbc.hg38 75f30131-c76d-41f4-aeca-63d39aa3215b b15ff237-f0dd-43f7-ac5d-b87789028115 C3L-01696 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-01696.evidence_0.a1ab108e-f673-4cce-862e-77fa87d4a4f5_wgs_gdc_realn.bam 409040 BAM faeee5ace1471ac4f081df1d679a5103 C3L-01696.WGS.Tbm.hg38 30772786-a9c8-40f0-b5c8-1853d6bd440b C3L-01696.WGS.Nbc.hg38 19666272-672e-45f8-98e1-10baefb2e231 6d5d6c10-eb4c-4f2e-9133-66d7c785fcdf C3L-01696 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-01696.evidence_1.eeae1365-1d8d-4397-b2ba-bf7aae4883ae_wgs_gdc_realn.bam 54815666 BAM e3834950a3e5dea137e9132182bf7bd0 C3L-01696.WGS.Tbm.hg38 30772786-a9c8-40f0-b5c8-1853d6bd440b C3L-01696.WGS.Nbc.hg38 19666272-672e-45f8-98e1-10baefb2e231 6d5d6c10-eb4c-4f2e-9133-66d7c785fcdf C3L-01696 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-01696.final.SV.WGS.vcf 145272 VCF 80db0d07fb5799c9550e3bb6d88df750 C3L-01696.WGS.Tbm.hg38 30772786-a9c8-40f0-b5c8-1853d6bd440b C3L-01696.WGS.Nbc.hg38 19666272-672e-45f8-98e1-10baefb2e231 6d5d6c10-eb4c-4f2e-9133-66d7c785fcdf @@ -920,6 +922,7 @@ C3L-02129 LUAD WGS_SV v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WGS_SV_ C3L-02129 LUAD WGS_SV v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WGS_SV_v1.1_LUAD_GBM.SV_20210415/C3L-02129.evidence_1.5f10744c-0ae5-4f7e-a3bc-34a201b73375_wgs_gdc_realn.bam 36262633 BAM d81ffbc2b26cc4d979ec241dc10cbe10 C3L-02129.WGS.T.hg38 547fac6d-d3fe-4c63-ba95-8fdb364e5df8 C3L-02129.WGS.N.hg38 5a1e0a78-70c6-4118-a60c-4ef220ea1e8f 3944bb89-3300-4b0c-8745-8328d14381d7 C3L-02129 LUAD WGS_SV v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WGS_SV_v1.1_LUAD_GBM.SV_20210415/C3L-02129.final.SV.WGS.vcf 145165 VCF d3ebc9d1eb138443a6076716ecabef50 C3L-02129.WGS.T.hg38 547fac6d-d3fe-4c63-ba95-8fdb364e5df8 C3L-02129.WGS.N.hg38 5a1e0a78-70c6-4118-a60c-4ef220ea1e8f 3944bb89-3300-4b0c-8745-8328d14381d7 C3L-02130 LSCC WGS_SV v1.1 20191120 Y3 /CPTAC3.Y2_WashU/LSCC/CPTAC3_LSCC_WGS_SV_v1.1_LSCC-remainder_20191120/C3L-02130.final.SV.WGS.vcf 158378 VCF 687158db39c67569698eba3e82c3c224 C3L-02130.WGS.T.hg38 6d9c3c11-0d28-481a-9392-86755de63ad3 C3L-02130.WGS.N.hg38 8490c690-dac7-4a72-b2bf-1991fbe05c36 +C3L-02132 AML WGS_SV v1.2.1 20200312 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2.1_2020-02-25_PDA_20200312/C3L-02132.ALQ_fbdeeac.final.SV.WGS.vcf 150921 VCF 815674f7749ad82afaf7e3c467c12079 C3L-02132.WGS.Tbm.hg38 78c5577f-05e9-46c6-9376-5ee607145665 C3L-02132.WGS.Nbc.hg38 8daf64b3-8a34-4191-a33e-4b6b6c38592f 1ad63f7c-1844-440e-b0df-9d256facdb05 C3L-02132 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-02132.evidence_0.baa4fc21-86c9-493d-bf8c-a097720cf807_wgs_gdc_realn.bam 31703622 BAM 677b6a8de327ea0da9e783977a60cd7b C3L-02132.WGS.Tbm.hg38 85d7287e-1a59-4f46-bb72-b244838ff573 C3L-02132.WGS.Nbc.hg38 8daf64b3-8a34-4191-a33e-4b6b6c38592f eda9111e-d177-4177-b9d4-727dd98e64ea C3L-02132 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-02132.evidence_1.5ebcb838-b5be-4a97-83ad-ee91f207b385_wgs_gdc_realn.bam 5054467 BAM c21d0c967ee4ac1d19dd4beea53f1f97 C3L-02132.WGS.Tbm.hg38 85d7287e-1a59-4f46-bb72-b244838ff573 C3L-02132.WGS.Nbc.hg38 8daf64b3-8a34-4191-a33e-4b6b6c38592f eda9111e-d177-4177-b9d4-727dd98e64ea C3L-02132 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-02132.final.SV.WGS.vcf 157271 VCF de19201ba21151fb63f0577d560c97dc C3L-02132.WGS.Tbm.hg38 85d7287e-1a59-4f46-bb72-b244838ff573 C3L-02132.WGS.Nbc.hg38 8daf64b3-8a34-4191-a33e-4b6b6c38592f eda9111e-d177-4177-b9d4-727dd98e64ea @@ -1254,6 +1257,7 @@ C3L-03271 LUAD WGS_SV v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WGS_SV_ C3L-03271 LUAD WGS_SV v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WGS_SV_v1.1_LUAD_GBM.SV_20210415/C3L-03271.final.SV.WGS.vcf 150611 VCF 62c249e5286d632b5b712b468c765e52 C3L-03271.WGS.T.hg38 2f96c07e-aa95-4164-8293-c59b1866b6aa C3L-03271.WGS.N.hg38 1699c142-456b-460d-8ae0-7c8eddbb1d4d 1e85f0e6-44d7-460f-b260-007b21d89b51 C3L-03272 LSCC WGS_SV v1.1 20191120 Y3 /CPTAC3.Y2_WashU/LSCC/CPTAC3_LSCC_WGS_SV_v1.1_LSCC-remainder_20191120/C3L-03272.final.SV.WGS.vcf 155687 VCF 0234b40da1ff310449075713165fe061 C3L-03272.WGS.T.hg38 72f758cf-917a-4a95-b714-d422e6c58128 C3L-03272.WGS.N.hg38 34b966ea-7310-4aad-ab2f-3abbff502e84 C3L-03303 AML WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/AML/CPTAC3_AML_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-03303.final.SV.WGS.vcf 153064 VCF 4ffb484b0eb111f3f23663fda1ffd38f C3L-03303.WGS.Tpb.hg38 941782bb-9b0c-49d8-9a3a-c0d6e4c95eb6 C3L-03303.WGS.Nbc.hg38 5d5ffeab-8fde-4425-b4c2-709184c3574e 912a12a9-d0d6-42d1-b18d-0a471d3d9d53 +C3L-03308 AML WGS_SV v1.2.1 20200312 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2.1_2020-02-25_PDA_20200312/C3L-03308.ALQ_feeff6d0.ALQ_13b0c409.final.SV.WGS.vcf 151719 VCF e481762498a0951488353a44c593c215 C3L-03308.WGS.Tbm.hg38 25391a83-7490-48ab-983b-d9df97c1b398 C3L-03308.WGS.Nbc.hg38 3f006696-9c85-46f6-80cb-a65dd4242e8f 930d40d8-f12f-4f4f-9586-006ce2403ce0 C3L-03308 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-03308.evidence_0.d3e20335-9964-459f-b475-7572352452cc_wgs_gdc_realn.bam 133927 BAM 7ed27b82bf3bfe0d804205ca187d47b2 C3L-03308.WGS.Tbm.hg38 0853efaa-8886-4b5c-96ce-547b63abbc8f C3L-03308.WGS.Nbc.hg38 443cebb5-a542-4866-9e67-df805b839012 6a78dfdf-0330-410e-8b4c-cd1bb9baa7e3 C3L-03308 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-03308.evidence_1.1489dd25-8419-4035-b058-cbd0c1d93caf_wgs_gdc_realn.bam 159023 BAM a059e5eae96153d42f1db9c24b63bd5f C3L-03308.WGS.Tbm.hg38 0853efaa-8886-4b5c-96ce-547b63abbc8f C3L-03308.WGS.Nbc.hg38 443cebb5-a542-4866-9e67-df805b839012 6a78dfdf-0330-410e-8b4c-cd1bb9baa7e3 C3L-03308 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-03308.final.SV.WGS.vcf 143716 VCF a40d90a90cac9f86b1eecaedd9ee7f64 C3L-03308.WGS.Tbm.hg38 0853efaa-8886-4b5c-96ce-547b63abbc8f C3L-03308.WGS.Nbc.hg38 443cebb5-a542-4866-9e67-df805b839012 6a78dfdf-0330-410e-8b4c-cd1bb9baa7e3 @@ -1297,6 +1301,7 @@ C3L-03463 LUAD WGS_SV v1.1 20210415 Y3 /CPTAC3.Y3_WashU/LUAD/CPTAC3_LUAD_WGS_SV_ C3L-03467 UCEC WGS_SV v1.1 20201009 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_WGS_SV_v1.1_WGS_SomaticSV.Y3.208_20201009/C3L-03467.evidence_0.71869d46-d631-4c9f-b9b6-a718ea06724b_wgs_gdc_realn.bam 53873605 BAM 54c4310b90615c7ae9e087e294c3f971 C3L-03467.WGS.T.hg38 6dbae026-e720-4d69-b088-32bdd1f26988 C3L-03467.WGS.N.hg38 e3de90da-a5bc-4515-9d79-3f6cc188dffd 1635fea3-04dc-451f-ba24-ce2423e532f0 C3L-03467 UCEC WGS_SV v1.1 20201009 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_WGS_SV_v1.1_WGS_SomaticSV.Y3.208_20201009/C3L-03467.evidence_1.2bd24eb4-3bd5-4de0-a870-9e3deb00b045_wgs_gdc_realn.bam 58973304 BAM c4565c120d525f19861e7085876cc898 C3L-03467.WGS.T.hg38 6dbae026-e720-4d69-b088-32bdd1f26988 C3L-03467.WGS.N.hg38 e3de90da-a5bc-4515-9d79-3f6cc188dffd 1635fea3-04dc-451f-ba24-ce2423e532f0 C3L-03467 UCEC WGS_SV v1.1 20201009 Y3 /CPTAC3.Y3_WashU/UCEC/CPTAC3_UCEC_WGS_SV_v1.1_WGS_SomaticSV.Y3.208_20201009/C3L-03467.final.SV.WGS.vcf 212921 VCF 2ff25cf22cc8f1283987ea956b5c65e7 C3L-03467.WGS.T.hg38 6dbae026-e720-4d69-b088-32bdd1f26988 C3L-03467.WGS.N.hg38 e3de90da-a5bc-4515-9d79-3f6cc188dffd 1635fea3-04dc-451f-ba24-ce2423e532f0 +C3L-03491 AML WGS_SV v1.2.1 20200312 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2.1_2020-02-25_PDA_20200312/C3L-03491.ALQ_c5c2e554.final.SV.WGS.vcf 164984 VCF b1d9002245abdcee6a5eb76a2398b261 C3L-03491.WGS.Tbm.hg38 42b8cc51-9a6d-47ac-b02d-32d608a179cd C3L-03491.WGS.Nbc.hg38 0ae4c8c0-bc44-4cbe-a3c3-04f845701bfb 95b6d397-894b-481b-a3a5-28238911f88a C3L-03491 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-03491.evidence_0.1ff3c330-46ce-47a5-b4d0-c54341f4f7a5_wgs_gdc_realn.bam 467027 BAM 687b7f08386f08a95ac24c05259bdb59 C3L-03491.WGS.Tbm.hg38 42b8cc51-9a6d-47ac-b02d-32d608a179cd C3L-03491.WGS.Nbc.hg38 5151bfab-e478-4666-a7d5-91cc71758983 2376d225-cb6d-48f9-a553-7342a7c27ed0 C3L-03491 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-03491.evidence_1.5b8efbc5-c97f-4232-8b67-88fb0a71d5df_wgs_gdc_realn.bam 71744768 BAM 861e96c08e0f4c6e478b9acc556ab7a4 C3L-03491.WGS.Tbm.hg38 42b8cc51-9a6d-47ac-b02d-32d608a179cd C3L-03491.WGS.Nbc.hg38 5151bfab-e478-4666-a7d5-91cc71758983 2376d225-cb6d-48f9-a553-7342a7c27ed0 C3L-03491 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-03491.final.SV.WGS.vcf 149241 VCF 6a71a76b680eb4c9e5f039b0160a88f5 C3L-03491.WGS.Tbm.hg38 42b8cc51-9a6d-47ac-b02d-32d608a179cd C3L-03491.WGS.Nbc.hg38 5151bfab-e478-4666-a7d5-91cc71758983 2376d225-cb6d-48f9-a553-7342a7c27ed0 @@ -1306,6 +1311,7 @@ C3L-03493 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1. C3L-03496 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-03496.evidence_0.60e4af64-58be-46eb-a31d-33af26cc948f_wgs_gdc_realn.bam 40340264 BAM 91e0d8c28a8dd672b3db0b78719160a7 C3L-03496.WGS.Tbm.hg38 3b7cb468-6327-4090-a75e-d332304d6a51 C3L-03496.WGS.Nbc.hg38 e28d6175-4ee7-497c-a49d-712b85f10815 44c61018-e3b8-49fe-854b-4cb04ce02e25 C3L-03496 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-03496.evidence_1.2ecad3ef-5282-4924-92d2-1c1e205967d5_wgs_gdc_realn.bam 40238655 BAM 97b5c48ca55f474d1b2ec0b1f2610226 C3L-03496.WGS.Tbm.hg38 3b7cb468-6327-4090-a75e-d332304d6a51 C3L-03496.WGS.Nbc.hg38 e28d6175-4ee7-497c-a49d-712b85f10815 44c61018-e3b8-49fe-854b-4cb04ce02e25 C3L-03496 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-03496.final.SV.WGS.vcf 148341 VCF 659ee8580fab83e1233713781de2324f C3L-03496.WGS.Tbm.hg38 3b7cb468-6327-4090-a75e-d332304d6a51 C3L-03496.WGS.Nbc.hg38 e28d6175-4ee7-497c-a49d-712b85f10815 44c61018-e3b8-49fe-854b-4cb04ce02e25 +C3L-03497 AML WGS_SV v1.2.1 20200312 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2.1_2020-02-25_PDA_20200312/C3L-03497.ALQ_bf82fab7.final.SV.WGS.vcf 153601 VCF acc3a6e09e5f1c7d3df60baa9ca09a81 C3L-03497.WGS.Tbm.hg38 819a71b8-b34d-42de-9fff-e1c948a5ea18 C3L-03497.WGS.Nbc.hg38 cba2d435-0d5a-4de9-a3ce-3bb906983089 077f6f18-974a-4041-8fde-1ac35d89c2a3 C3L-03497 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-03497.evidence_0.bf771a0d-734e-4a46-a7fb-e8a733e9e17b_wgs_gdc_realn.bam 357706 BAM cd54fcd17ab9b854c696e6b1872f6119 C3L-03497.WGS.Tbm.hg38 819a71b8-b34d-42de-9fff-e1c948a5ea18 C3L-03497.WGS.Nbc.hg38 492aa2d8-f3cf-4a7c-beb4-0ba4abdb38bb 3a7b9705-99b2-44fe-863f-65fddd6ca6e0 C3L-03497 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-03497.evidence_1.450e4b1c-4c7f-445e-91bb-880d0024fa02_wgs_gdc_realn.bam 43658917 BAM 941eaa525413372d3285b0c073daa551 C3L-03497.WGS.Tbm.hg38 819a71b8-b34d-42de-9fff-e1c948a5ea18 C3L-03497.WGS.Nbc.hg38 492aa2d8-f3cf-4a7c-beb4-0ba4abdb38bb 3a7b9705-99b2-44fe-863f-65fddd6ca6e0 C3L-03497 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-03497.final.SV.WGS.vcf 149706 VCF 2d1eeaf2b75708836358a7d1aad43ef7 C3L-03497.WGS.Tbm.hg38 819a71b8-b34d-42de-9fff-e1c948a5ea18 C3L-03497.WGS.Nbc.hg38 492aa2d8-f3cf-4a7c-beb4-0ba4abdb38bb 3a7b9705-99b2-44fe-863f-65fddd6ca6e0 @@ -1671,6 +1677,7 @@ C3L-05369 LSCC WGS_SV v1.1 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WGS_SV_ C3L-05386 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-05386.evidence_0.9271ecfc-7bb8-4e93-9b7c-11c500666325_wgs_gdc_realn.bam 52886719 BAM 72bb2a33851dd9a12ea24cf2e549e1db C3L-05386.WGS.Tpb.hg38 f47fe90d-7a83-4f95-9c44-0c4ebc39d6b3 C3L-05386.WGS.Nbc.hg38 53b93788-0e38-4cb9-b5f2-818b0488012e a00d9c0a-6e5f-47ad-b0cc-4a7e836fc5f0 C3L-05386 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-05386.evidence_1.e0497046-63a5-4b92-b60f-39b07deae642_wgs_gdc_realn.bam 57158713 BAM f470b55e334d98c35227af1b5d6a2edb C3L-05386.WGS.Tpb.hg38 f47fe90d-7a83-4f95-9c44-0c4ebc39d6b3 C3L-05386.WGS.Nbc.hg38 53b93788-0e38-4cb9-b5f2-818b0488012e a00d9c0a-6e5f-47ad-b0cc-4a7e836fc5f0 C3L-05386 AML WGS_SV v1.2 20220411 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2_CPTAC3_AML1_20220411/C3L-05386.final.SV.WGS.vcf 149874 VCF 3369d462943d564d8a67e90be8e35572 C3L-05386.WGS.Tpb.hg38 f47fe90d-7a83-4f95-9c44-0c4ebc39d6b3 C3L-05386.WGS.Nbc.hg38 53b93788-0e38-4cb9-b5f2-818b0488012e a00d9c0a-6e5f-47ad-b0cc-4a7e836fc5f0 +C3L-05387 AML WGS_SV v1.2.1 20200312 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2.1_2020-02-25_PDA_20200312/C3L-05387.final.SV.WGS.vcf 153039 VCF 61a9bc25f32678b1b72878df6a78588d C3L-05387.WGS.Tpb.hg38 0520ac98-e70b-4ed0-a3cb-d9ffc1552369 C3L-05387.WGS.Nbc.hg38 4ddeb513-59b0-4e4b-b1e5-61cf1f7fb6fe da3adeac-f945-47c6-be5f-2d80fcf592f3 C3L-05392 LSCC WGS_SV v1.1 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WGS_SV_v1.1_batch821_20210916/C3L-05392.evidence_0.74d7b8bf-5f4b-4e3e-841e-5d59c2afba8a_wgs_gdc_realn.bam 54466248 BAM 8b8b1e6fc44a64234ad93fe8abacaca9 C3L-05392.WGS.T.hg38 309533ab-d9a0-45eb-af78-d80eca0bcd5f C3L-05392.WGS.N.hg38 1b5199ab-2746-4ae7-ba6a-aacdf07a0429 57865da6-114e-4d3b-a85c-c9421c77b4f3 C3L-05392 LSCC WGS_SV v1.1 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WGS_SV_v1.1_batch821_20210916/C3L-05392.evidence_1.345fba5f-2345-40ab-9d42-ffd0a47db599_wgs_gdc_realn.bam 50315700 BAM cfb23ffc65ef2ed26e633ca2b0a7f400 C3L-05392.WGS.T.hg38 309533ab-d9a0-45eb-af78-d80eca0bcd5f C3L-05392.WGS.N.hg38 1b5199ab-2746-4ae7-ba6a-aacdf07a0429 57865da6-114e-4d3b-a85c-c9421c77b4f3 C3L-05392 LSCC WGS_SV v1.1 20210916 Y3 /CPTAC3.Y3_WashU/LSCC/CPTAC3_LSCC_WGS_SV_v1.1_batch821_20210916/C3L-05392.final.SV.WGS.vcf 172158 VCF eb52135b575df24fd91ca06bef5c83ed C3L-05392.WGS.T.hg38 309533ab-d9a0-45eb-af78-d80eca0bcd5f C3L-05392.WGS.N.hg38 1b5199ab-2746-4ae7-ba6a-aacdf07a0429 57865da6-114e-4d3b-a85c-c9421c77b4f3 @@ -1765,6 +1772,7 @@ C3L-06356 AML WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/AML/CPTAC3_AML_W C3L-06357 AML WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/AML/CPTAC3_AML_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-06357.final.SV.WGS.vcf 175245 VCF ceeddf4e58af00d1d3b6022ab30c54ce C3L-06357.WGS.Tbm.hg38 f0b7f86b-7fb4-4f2d-8d51-0f71d8cb3d84 C3L-06357.WGS.Nbc.hg38 0ae5fa74-35c4-400e-8946-969a354b3d0d 9652fa2f-0358-4786-a14a-b3baae877396 C3L-06364 AML WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/AML/CPTAC3_AML_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-06364.final.SV.WGS.vcf 153423 VCF 66c54edbfa01bed57c8e655247878fb1 C3L-06364.WGS.Tbm.hg38 d61d96da-f617-4d13-adae-d615f336047c C3L-06364.WGS.Nbc.hg38 04197309-7cc3-4385-a294-284c8c7e108d 1af046a5-4b3f-4dea-ab10-95742e44f852 C3L-06367 AML WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/AML/CPTAC3_AML_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-06367.final.SV.WGS.vcf 182332 VCF 74a4a49fba3a0b2c04a1972a9832bcd3 C3L-06367.WGS.Tbm.hg38 4b683e0d-6960-41cb-99c1-ed1ab9efa601 C3L-06367.WGS.Nbc.hg38 d72473d5-e10f-4d2c-967b-af4c443685bd 89cce1b6-d2c6-408c-8652-4a8f0b86149d +C3L-06368 AML WGS_SV v1.2.1 20200312 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2.1_2020-02-25_PDA_20200312/C3L-06368.final.SV.WGS.vcf 153811 VCF 5af11444c685e4b5e2fc0b4833c64341 C3L-06368.WGS.Tpb.hg38 09a49042-9bfb-4c24-9643-e4c0de3a62d6 C3L-06368.WGS.Nbc.hg38 34caf708-795e-4b5b-9aa0-f958cc5dfdb0 7f8577f9-93d1-440a-9613-f7063331b0fd C3L-06369 AML WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/AML/CPTAC3_AML_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-06369.final.SV.WGS.vcf 155617 VCF 734d9edd96530230a537f37d51834a28 C3L-06369.WGS.Tbm.hg38 d93cf91b-6505-4604-90a9-1ed7919a25f7 C3L-06369.WGS.Nbc.hg38 d4778278-deab-47c4-8cad-3ad89a813df0 421ef048-2160-4bea-af4c-b7d3a1a81a06 C3L-06374 AML WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/AML/CPTAC3_AML_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-06374.final.SV.WGS.vcf 149963 VCF 06c7ad1a06570ca9f37914fd9933f0d9 C3L-06374.WGS.Tbm.hg38 5a782fa9-d539-48e4-bdea-eee86f280403 C3L-06374.WGS.Nbc.hg38 1baab9c9-7a4f-40c9-9873-5fa78856e42e f787946e-fa16-48b1-ab3c-f58e1f19c4db C3L-06536 AML WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/AML/CPTAC3_AML_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-06536.final.SV.WGS.vcf 162203 VCF c1cf3663035e70a889ba874e5f57184b C3L-06536.WGS.Tbm.hg38 0819a42c-0ec4-4c56-9085-a5cefa866e5c C3L-06536.WGS.Nbc.hg38 d3eb1159-4ed5-4b4b-afc7-3121c141a45f 305ffa60-79ef-4e18-ad25-f099c3435a9c @@ -1791,11 +1799,17 @@ C3L-06982 AML WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/AML/CPTAC3_AML_W C3L-06983 AML WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/AML/CPTAC3_AML_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-06983.final.SV.WGS.vcf 151839 VCF 285234b37a2044d3ff81649c9e63af50 C3L-06983.WGS.Tpb.hg38 1e2921db-5243-4ee6-8d9b-07ecef59fa12 C3L-06983.WGS.Nbc.hg38 69d8818f-a69e-4afa-a106-5bcbeece0a49 abbb7030-c1f7-4bbc-81c5-66363401405e C3L-06984 AML WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/AML/CPTAC3_AML_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-06984.final.SV.WGS.vcf 152700 VCF 6b1d65c62399df0070961cdfad5e45e9 C3L-06984.WGS.Tpb.hg38 dc89ef04-c297-4432-a134-46486e9e8dcb C3L-06984.WGS.Nbc.hg38 65b123d9-9d59-4697-82bf-9db318649bb3 8cf9e3e4-3cf0-4980-8319-b3c70d329723 C3L-07013 AML WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/AML/CPTAC3_AML_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-07013.final.SV.WGS.vcf 150277 VCF 51a66ddaefd5a525ef2de9830eba8968 C3L-07013.WGS.Tbm.hg38 56965835-c74a-4372-9f42-4bb4fe46ae3a C3L-07013.WGS.Nbc.hg38 998c64c5-cac5-473d-a385-8c99522cf665 735ea702-a40f-445a-9370-18c4befec66c +C3L-07019 AML WGS_SV v1.2.1 20200312 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2.1_2020-02-25_PDA_20200312/C3L-07019.final.SV.WGS.vcf 146990 VCF d2ed448976e63e75a61d59f813153bb3 C3L-07019.WGS.Tbm.hg38 a55724e7-05c0-4e12-8d3e-6efca4a88629 C3L-07019.WGS.Nbc.hg38 09d4f031-3639-4997-bd8d-47f40614406a 5c4c8388-4361-4789-ba5a-fc9c68545af6 C3L-07202 GBM WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/GBM/CPTAC3_GBM_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-07202.final.SV.WGS.vcf 150183 VCF bdc3d05f397eb8f3a2deef3d03b9e28a C3L-07202.WGS.T.hg38 27664a4a-b413-4602-a67e-2f168c52e22a C3L-07202.WGS.N.hg38 e8e293fc-c8ca-4cc8-809a-18ff04d36c91 9de8bf12-29b7-4f44-b5a1-9a16be1c1e8f C3L-07213 GBM WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/GBM/CPTAC3_GBM_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-07213.final.SV.WGS.vcf 152173 VCF 95be2678f4ce24518187239a482be17c C3L-07213.WGS.T.hg38 50f5310c-72b0-4d41-a8ce-6f4b370c351e C3L-07213.WGS.N.hg38 81f5956f-4df7-41d9-be6e-af59c628b6dd 4dbf2060-92f9-4a37-95b1-5d151375e968 C3L-07437 AML WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/AML/CPTAC3_AML_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-07437.final.SV.WGS.vcf 152827 VCF a7bf37a39f2a6122940a982792a03193 C3L-07437.WGS.Tpb.hg38 b8a63078-67cb-4929-afe2-4ab723ea9327 C3L-07437.WGS.Nbc.hg38 7f2b71bd-804b-4dbb-9d74-3539784d34e4 d6ed7dc6-4fb3-478a-af06-5d6fb203c4aa +C3L-07438 AML WGS_SV v1.2.1 20200312 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2.1_2020-02-25_PDA_20200312/C3L-07438.final.SV.WGS.vcf 150270 VCF 7dbd1a90f9db9c7ae53865b4b0a83f4a C3L-07438.WGS.Tbm.hg38 1c0ae29d-7e6c-4b71-b4f6-28aca5655a62 C3L-07438.WGS.Nbc.hg38 4e91a1e3-f499-4f9e-8a3b-88fa524afcd5 440d15c2-e1b7-455c-870e-68547b031dc6 C3L-07439 AML WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/AML/CPTAC3_AML_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-07439.final.SV.WGS.vcf 148938 VCF 31448df43337cb639af27ff32668dc73 C3L-07439.WGS.Tpb.hg38 e8607566-c0aa-40a6-9b90-263e0ab072b1 C3L-07439.WGS.Nbc.hg38 8f38803a-d993-4cf9-a78b-121bb76b10d0 32370bec-2d90-450c-8731-a2551efa1aa9 +C3L-07488 AML WGS_SV v1.2.1 20200312 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2.1_2020-02-25_PDA_20200312/C3L-07488.final.SV.WGS.vcf 154240 VCF 0b181f35da37fc6e9542c97f6b349c6a C3L-07488.WGS.Tbm.hg38 d54dc76a-b11b-48da-9082-789d663d0595 C3L-07488.WGS.Nbc.hg38 1866398c-fef4-4fd5-8866-b6bf19eab6fc 3a709f95-2141-49cc-adc9-1905409e10f2 C3L-07490 AML WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/AML/CPTAC3_AML_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-07490.final.SV.WGS.vcf 150178 VCF 3b6226a495eac85ef8510f25fbaffd53 C3L-07490.WGS.Tbm.hg38 036102b0-a019-45e8-b9db-ea99632f6ad5 C3L-07490.WGS.Nbc.hg38 6a7bc4a4-fbca-48ac-9c0d-c65bfbddbb8d aedf38df-6830-4508-a8e2-8db3fea37365 +C3L-07571 AML WGS_SV v1.2.1 20200312 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2.1_2020-02-25_PDA_20200312/C3L-07571.final.SV.WGS.vcf 150894 VCF 3676134f1ecbc99d914e23693a39e49a C3L-07571.WGS.Tbm.hg38 9098f219-140a-4650-99bd-e913e63d34a3 C3L-07571.WGS.Nbc.hg38 6558772a-b585-42b2-a004-dacac3f149a6 565cd3bd-421f-4d33-9d47-4d1d248550f2 +C3L-07580 AML WGS_SV v1.2.1 20200312 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2.1_2020-02-25_PDA_20200312/C3L-07580.final.SV.WGS.vcf 192325 VCF a9f0a35d3641efdec2d6c54f727e2305 C3L-07580.WGS.Tbm.hg38 9e65b041-b05b-4bb7-90e7-893db1b98b3c C3L-07580.WGS.Nbc.hg38 aa98a997-9e86-4f56-a1a9-d43806329099 a5728b51-056e-45fc-ab1c-0d5119ecc8fc +C3L-07588 AML WGS_SV v1.2.1 20200312 Y3 /CPTAC3.Y3_WashU/AML/CPTAC3_AML_WGS_SV_v1.2.1_2020-02-25_PDA_20200312/C3L-07588.final.SV.WGS.vcf 156221 VCF e01909af87345607759f19dd2427f3a1 C3L-07588.WGS.Tbm.hg38 fa5fc9ef-1e51-4d08-b549-7f4640bb64d5 C3L-07588.WGS.Nbc.hg38 ce3667ab-209d-4905-98a8-ee54842e1c50 ef886581-6ad4-413e-923d-1ec30447f649 C3L-07611 GBM WGS_SV v1.2.1 20220904 Y3 /CPTAC3.Y3_WashU_Upload/GBM/CPTAC3_GBM_WGS_SV_v1.2.1_WGS_SV_CNV_20220904/C3L-07611.final.SV.WGS.vcf 146150 VCF d2306dfa9fe189b9ec6d69c6bbd697dd C3L-07611.WGS.T.hg38 c86ee9c9-faff-49f4-b731-53751cc80228 C3L-07611.WGS.N.hg38 0ef89055-e885-438d-9e05-f60f89725367 3f470c35-8f10-40a8-822d-4bf8447e8781 C3N-00148 CCRCC WGS_SV v1.1 20200813 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_WGS_SV_v1.1_WGS_SV.Y3.620_20200813/C3N-00148.evidence_0.925a6f92-a5cd-4b65-8fe4-11ff3c4efd2b_gdc_realn.bam 63235226 BAM 8c5876dc65a6cbe970b8ad0587a52686 C3N-00148.WGS.T.hg38 521f64b0-af2c-46ca-915d-2b4d563b744d C3N-00148.WGS.N.hg38 aeb1deff-af9c-4977-8b98-e3ebfc0653bd e012de7f-9a09-465d-ad2e-3132bcc6a0a9 C3N-00148 CCRCC WGS_SV v1.1 20200813 Y3 /CPTAC3.Y3_WashU/CCRCC/CPTAC3_CCRCC_WGS_SV_v1.1_WGS_SV.Y3.620_20200813/C3N-00148.evidence_1.127293c3-8feb-4aa1-8f52-1461eeff35ca_gdc_realn.bam 54257241 BAM a400dcfa4beeb8013aaf3f08404c887e C3N-00148.WGS.T.hg38 521f64b0-af2c-46ca-915d-2b4d563b744d C3N-00148.WGS.N.hg38 aeb1deff-af9c-4977-8b98-e3ebfc0653bd e012de7f-9a09-465d-ad2e-3132bcc6a0a9