diff --git a/CPTAC3.Catalog.dat b/CPTAC3.Catalog.dat index e68866f..8f781fc 100644 --- a/CPTAC3.Catalog.dat +++ b/CPTAC3.Catalog.dat @@ -633,6 +633,7 @@ C259161.RNA-Seq.transcriptome.T.hg38 C259161 GBM RNA-Seq tumor 7316UP-293-110478 C259161.WGS.N C259161 GBM WGS blood_normal 7316UP-293-1105283 7316UP-293-1105283.WholeGenome.RP-2158.bam 57896176406 BAM NA 3da278c9-b808-4a2e-af20-5ba92f403ab0 19be2d8cdb31387309514ec0d57cf365 hg19 Blood Derived Normal 1105283 C259161.WGS.N.hg38 C259161 GBM WGS blood_normal 7316UP-293-1105283 603ac742-ade4-40ab-8520-057a0e4f8ecb_wgs_gdc_realn.bam 170408183425 BAM NA 957eecd3-4344-4afa-9bf2-b2af7d954a5e 12867c9c06bffa66e40949a6e653c86c hg38 Blood Derived Normal 1105283 C259161.WGS.R C259161 GBM WGS recurrent_tumor 7316UP-349-1105257 7316UP-349-1105257.WholeGenome.RP-2158.bam 50639596227 BAM NA 9acde03d-85af-45b6-850f-fa97cc0c7340 0ef07a74f7de9c04f55f9c3bfaa25648 hg19 Recurrent Tumor 1105257 +C259161.WGS.R.hg38 C259161 GBM WGS recurrent_tumor 7316UP-349-1105257 9d818652-ee59-4e8b-84f0-d25532dd38cf_wgs_gdc_realn.bam 147986610083 BAM NA 0784f4d4-d647-403c-bf97-411858afc33f 16d7b51b39e2dbe2f17729db3f00f34d hg38 Recurrent Tumor 1105257 C259161.WGS.T.ADNA_5c7e3295 C259161 GBM WGS tumor 7316UP-293 7316UP-293.WholeGenome.RP-2158.bam 51492350207 BAM NA b9dd5682-e558-42df-b76f-56dffe1d3e63 add9f5ad40c48a6ba4fe48fa34ea842a hg19 Primary Tumor SM-JU32P sample_tag=ADNA_5c7e3295 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C259161.WGS.T.ADNA_5c7e3295.hg38 C259161 GBM WGS tumor 7316UP-293 71aff02e-d6dd-4292-8627-d33c7d95fea5_wgs_gdc_realn.bam 147762673467 BAM NA 88db0eef-aadc-4e7b-b6e9-20df18940bf3 806cf54a700a596a2fecbd4300aabc1b hg38 Primary Tumor SM-JU32P sample_tag=ADNA_5c7e3295 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C259161.WGS.T C259161 GBM WGS tumor 7316UP-293-1105250 7316UP-293-1105250.WholeGenome.RP-2158.bam 57788463110 BAM NA 74371bec-c399-456a-b912-e49ef8cf7290 893770295090e3ebf3c290994a74922f hg19 Primary Tumor 1105250 @@ -1101,23 +1102,6 @@ C3L-00011.WXS.N C3L-00011 CCRCC WXS blood_normal CPT0000090163 CPT0000090163.Who C3L-00011.WXS.N.hg38 C3L-00011 CCRCC WXS blood_normal CPT0000090163 1fd51af9-c67f-4c54-8c8e-db4aef40d5ad_gdc_realn.bam 43773407484 BAM NA c21dd423-3756-4eff-baac-5bba006dcddc cbcca342973ce66509ffce2f320a554b hg38 Blood Derived Normal C3L-00011-31 C3L-00011.WXS.T C3L-00011 CCRCC WXS tumor CPT0001340005 CPT0001340005.WholeExome.RP-1303.bam 28970151226 BAM NA ecb947fc-fc74-4e9b-a11a-21cb025f50d9 af5b9bf38036a88238ab98a11e5f868c hg19 Primary Tumor C3L-00011-01 C3L-00011.WXS.T.hg38 C3L-00011 CCRCC WXS tumor CPT0001340005 f47b3035-cf5e-4905-8859-1459781618fc_gdc_realn.bam 39407921534 BAM NA 2f688f41-2b8e-4282-a2b8-ce07390d4c4b c21a7ea4231aff58360aa30c9ddaa11e hg38 Primary Tumor C3L-00011-01 -C3L-00016.MethArray.Green.T C3L-00016 GBM Methylation Array tumor CPT0000160003 202176290116_R07C01_Grn.idat 13676226 IDAT Green b30ea41c-3d88-4374-ac56-817f21a4a883 1115d3f97da39dd58c32454a8c9daac5 NA Primary Tumor C3L-00016-01,C3L-00016-04 -C3L-00016.MethArray.Red.T C3L-00016 GBM Methylation Array tumor CPT0000160003 202176290116_R07C01_Red.idat 13676226 IDAT Red 13b7fc78-234a-4239-bc28-a890b0753355 f0bbec1282bb8b928cc0f5bd7d9e0e06 NA Primary Tumor C3L-00016-01,C3L-00016-04 -C3L-00016.miRNA-Seq.T C3L-00016 GBM miRNA-Seq tumor CPT0000160009 181012_UNC32-K00270_0124_AH223CBBXY_GATCAG_S30_L002_R1_001.unaln.bam 221975879 BAM NA 3e737b61-f962-4802-8a06-c1700f66b349 4239df47e9d0407453b6dd3ac9de124b NA Primary Tumor C3L-00016-01,C3L-00016-04 -C3L-00016.miRNA-Seq.T.hg38 C3L-00016 GBM miRNA-Seq tumor CPT0000160009 150c39c8-9fc8-4e39-b4cd-60107c069c55_mirnaseq_gdc_realn.bam 244553837 BAM NA cf8be618-3d9e-4f2e-90e6-0acaa0e890e6 b69ed86871405103b680b773ae8d441f hg38 Primary Tumor C3L-00016-01,C3L-00016-04 -C3L-00016.RNA-Seq.chimeric.T.hg38 C3L-00016 GBM RNA-Seq tumor CPT0000160009 62e8d8fe-4229-4721-aa04-dc6b8121670b.rna_seq.chimeric.gdc_realn.bam 154831679 BAM chimeric 5854b169-212c-464a-9e8d-c96a943e5a49 449b12b8fd4ce000d67daa91c94b3323 hg38 Primary Tumor C3L-00016-01,C3L-00016-04 -C3L-00016.RNA-Seq.genomic.T.hg38 C3L-00016 GBM RNA-Seq tumor CPT0000160009 62e8d8fe-4229-4721-aa04-dc6b8121670b.rna_seq.genomic.gdc_realn.bam 7533971382 BAM genomic fc56c01f-4d64-4a0e-81a8-dca8a6f7d9f9 45dd593d543fe3163955a1213057a546 hg38 Primary Tumor C3L-00016-01,C3L-00016-04 -C3L-00016.RNA-Seq.R1.T C3L-00016 GBM RNA-Seq tumor CPT0000160009 170818_UNC32-K00270_0050_AHL2FHBBXX_TAGCTT_S15_L004_R1_001.fastq.gz 3913028223 FASTQ NA b9a867a6-3d0e-4ae3-9255-b14de2da0bc0 44800753a6eba14930f1948a8dcea606 NA Primary Tumor C3L-00016-01,C3L-00016-04 -C3L-00016.RNA-Seq.R2.T C3L-00016 GBM RNA-Seq tumor CPT0000160009 170818_UNC32-K00270_0050_AHL2FHBBXX_TAGCTT_S15_L004_R2_001.fastq.gz 4252326429 FASTQ NA 9be64798-0704-4670-98e6-14d37e34d359 a2b43c4c526080760a2cc05e5f2678f9 NA Primary Tumor C3L-00016-01,C3L-00016-04 -C3L-00016.RNA-Seq.transcriptome.T.hg38 C3L-00016 GBM RNA-Seq tumor CPT0000160009 62e8d8fe-4229-4721-aa04-dc6b8121670b.rna_seq.transcriptome.gdc_realn.bam 10429668835 BAM transcriptome bdfd31e2-ee6a-4982-b506-549dcf92d140 76c7251810e4b7caefff5e7f08bf6cd6 hg38 Primary Tumor C3L-00016-01,C3L-00016-04 -C3L-00016.WGS.N C3L-00016 GBM WGS blood_normal CPT0000560002 CPT0000560002.WholeGenome.RP-1303.bam 65872139991 BAM NA a9c08dcc-0df0-459b-a608-308b3c018030 d7afba4b719da09166d891ed997ff477 hg19 Blood Derived Normal C3L-00016-31 -C3L-00016.WGS.N.hg38 C3L-00016 GBM WGS blood_normal CPT0000560002 65158bcf-b42e-4e35-aa37-aad195b41e03_gdc_realn.bam 97699854646 BAM NA 7afe875f-ea77-47f6-a840-2b6f5ac8d749 00fdebecb8df92150d58c24b8f67925c hg38 Blood Derived Normal C3L-00016-31 -C3L-00016.WGS.T C3L-00016 GBM WGS tumor CPT0000160003 CPT0000160003.WholeGenome.RP-1303.bam 59650983098 BAM NA 3758ca28-0fb7-4970-a11d-c4b98a5a82d6 8986bba774e64dced8c8e87bccadd7db hg19 Primary Tumor C3L-00016-01,C3L-00016-04 -C3L-00016.WGS.T.hg38 C3L-00016 GBM WGS tumor CPT0000160003 0eb51bef-799b-4c17-89dc-b5e15f13d7bc_gdc_realn.bam 88511055555 BAM NA d0d761fc-b161-4a9d-9f0c-66d30fba4c08 9d8fee0a29114b4f84c684aea28dc883 hg38 Primary Tumor C3L-00016-01,C3L-00016-04 -C3L-00016.WXS.N C3L-00016 GBM WXS blood_normal CPT0000560002 CPT0000560002.WholeExome.RP-1303.bam 30709679001 BAM NA 088d4e44-d33e-4416-97ae-dc56ee08100f 90b6c54d15c21c7ca6fd66c766f24d2a hg19 Blood Derived Normal C3L-00016-31 -C3L-00016.WXS.N.hg38 C3L-00016 GBM WXS blood_normal CPT0000560002 65158bcf-b42e-4e35-aa37-aad195b41e03_gdc_realn.bam 41708167708 BAM NA fb7e7564-2179-4c8c-8a4c-ed50a4205a4b f385af337f0ad1ea8b9e5ea21f9f712e hg38 Blood Derived Normal C3L-00016-31 -C3L-00016.WXS.T C3L-00016 GBM WXS tumor CPT0000160003 CPT0000160003.WholeExome.RP-1303.bam 33862807740 BAM NA 534c34c4-c658-4c33-bcd0-1830314b453f ee7a6067f902acd3ec315d5fa2f63850 hg19 Primary Tumor C3L-00016-01,C3L-00016-04 -C3L-00016.WXS.T.hg38 C3L-00016 GBM WXS tumor CPT0000160003 0eb51bef-799b-4c17-89dc-b5e15f13d7bc_gdc_realn.bam 46164947735 BAM NA 89be0404-faf9-42f7-8e21-9ad3416a1694 47da7d0c6b92de9ebe328146a8b3d56a hg38 Primary Tumor C3L-00016-01,C3L-00016-04 C3L-00017.MethArray.Green.A C3L-00017 PDA Methylation Array tissue_normal CPT0000270008 203561450017_R08C01_Grn.idat 13676216 IDAT Green e9daa8b4-e05b-475f-a37c-efe598df3539 f547adfbac7c02930af0a769802b9107 NA Solid Tissue Normal C3L-00017-04 C3L-00017.MethArray.Green.T C3L-00017 PDA Methylation Array tumor CPT0000250005 202178770006_R07C01_Grn.idat 13676231 IDAT Green 3efda741-accc-461e-a1e8-78c82d7c63eb ac101243e5cf64bf40ccdfa1945d8a08 NA Primary Tumor C3L-00017-02 C3L-00017.MethArray.Red.A C3L-00017 PDA Methylation Array tissue_normal CPT0000270008 203561450017_R08C01_Red.idat 13676216 IDAT Red 2661771e-2854-4c68-ba50-156b41fb6a72 ae21f85986577294ad25fa9d069a9299 NA Solid Tissue Normal C3L-00017-04 @@ -1152,23 +1136,6 @@ C3L-00017.WXS.T C3L-00017 PDA WXS tumor CPT0000250005 CPT0000250005.WholeExome.R C3L-00017.WXS.T.hg38 C3L-00017 PDA WXS tumor CPT0000250005 90daf6b6-b405-431c-bb0d-6f52df3e6ef9_gdc_realn.bam 34757652255 BAM NA 83ea0e10-82b1-4092-b8a4-770e179ef4cd b29ccc6a9e383fd2a3b3cb96d1acb6c6 hg38 Primary Tumor C3L-00017-02 C3L-00017.WXS.T.hg38.high_cov C3L-00017 PDA WXS tumor CPT0000250005_1 b6dfbba3-5e2c-40c1-8246-1f47c70490a2_wxs_gdc_realn.bam 70928730248 BAM NA 4e2c5edf-8162-46f2-bb3e-11de6846c0e3 bacca1b690a7116b0e312469acf599ec hg38 Primary Tumor C3L-00017-02 local_meta=.high_cov C3L-00017.WXS.T.high_cov C3L-00017 PDA WXS tumor CPT0000250005_1 CPT0000250005_1.WholeExome.RP-1303.bam 52414701226 BAM NA 6004cd9d-9c4e-4259-b57c-1ab203015d2a d9c4ba97a0e9b59eefec9558051348c4 hg19 Primary Tumor C3L-00017-02 local_meta=.high_cov -C3L-00019.MethArray.Green.T C3L-00019 GBM Methylation Array tumor CPT0017430007 202176300039_R07C01_Grn.idat 13676224 IDAT Green c89451be-e74a-4f9f-987c-af3cbc03346d f8ee9d4fa92eb52672d86d24208fe4ed NA Primary Tumor C3L-00019-01,C3L-00019-03 -C3L-00019.MethArray.Red.T C3L-00019 GBM Methylation Array tumor CPT0017430007 202176300039_R07C01_Red.idat 13676224 IDAT Red 84cab415-df9e-4327-8131-5e23e7f56605 c4de49c5a3408557f7d7d7e43a6305b0 NA Primary Tumor C3L-00019-01,C3L-00019-03 -C3L-00019.miRNA-Seq.T C3L-00019 GBM miRNA-Seq tumor CPT0017430010 181012_UNC32-K00270_0124_AH223CBBXY_CCGTCC_S37_L004_R1_001.unaln.bam 264088211 BAM NA 44f1bd93-573b-47d3-bb99-0520b569a493 a142fc04542ba593cf7b8cba5fcec06d NA Primary Tumor C3L-00019-01,C3L-00019-03 -C3L-00019.miRNA-Seq.T.hg38 C3L-00019 GBM miRNA-Seq tumor CPT0017430010 e0b00f82-20c3-45ee-ae64-f194146b8f3f_mirnaseq_gdc_realn.bam 297729849 BAM NA 7697c569-2851-4037-86d1-9f9d3de3cb4c 097c32b4b6582a11864a5a7299adb7df hg38 Primary Tumor C3L-00019-01,C3L-00019-03 -C3L-00019.RNA-Seq.chimeric.T.hg38 C3L-00019 GBM RNA-Seq tumor CPT0017430010 1d7b2f2a-5812-430e-a71c-45094a3286d8.rna_seq.chimeric.gdc_realn.bam 122130421 BAM chimeric 21132092-cc82-4d24-bd69-9079ef88cb99 c97e2cc8407438da737bb4ce8eb989a8 hg38 Primary Tumor C3L-00019-01,C3L-00019-03 -C3L-00019.RNA-Seq.genomic.T.hg38 C3L-00019 GBM RNA-Seq tumor CPT0017430010 1d7b2f2a-5812-430e-a71c-45094a3286d8.rna_seq.genomic.gdc_realn.bam 6796368612 BAM genomic b2931683-5dca-4f8c-86b2-c427f7e7cdda 6b2ce0371d4c6de1f4007ead74a4c8f6 hg38 Primary Tumor C3L-00019-01,C3L-00019-03 -C3L-00019.RNA-Seq.R1.T C3L-00019 GBM RNA-Seq tumor CPT0017430010 170818_UNC32-K00270_0050_AHL2FHBBXX_CTTGTA_S13_L004_R1_001.fastq.gz 3551739616 FASTQ NA 7ae23e9f-db8a-4d48-9221-2e904d412114 dc14a43a902a5977812c3d1919208664 NA Primary Tumor C3L-00019-01,C3L-00019-03 -C3L-00019.RNA-Seq.R2.T C3L-00019 GBM RNA-Seq tumor CPT0017430010 170818_UNC32-K00270_0050_AHL2FHBBXX_CTTGTA_S13_L004_R2_001.fastq.gz 3845745206 FASTQ NA dd80bb19-be20-4406-8aa8-f0761672fd0d 1ff76a2f452077f9efe6feb0a9352a17 NA Primary Tumor C3L-00019-01,C3L-00019-03 -C3L-00019.RNA-Seq.transcriptome.T.hg38 C3L-00019 GBM RNA-Seq tumor CPT0017430010 1d7b2f2a-5812-430e-a71c-45094a3286d8.rna_seq.transcriptome.gdc_realn.bam 8900250796 BAM transcriptome 566679d6-ffee-45d4-98e9-7c0f39229d82 c00f9a072bae1925367df20315d1bb0c hg38 Primary Tumor C3L-00019-01,C3L-00019-03 -C3L-00019.WGS.N C3L-00019 GBM WGS blood_normal CPT0015360002 CPT0015360002.WholeGenome.RP-1303.bam 84629196931 BAM NA 6a04ff8a-1715-4227-9e22-8741e30667ba 05ab217f7ff24b348271e1008f666dbb hg19 Blood Derived Normal C3L-00019-31 -C3L-00019.WGS.N.hg38 C3L-00019 GBM WGS blood_normal CPT0015360002 383c9539-9c57-47c4-90f3-c0453068ff6f_gdc_realn.bam 130962659926 BAM NA 2aa44cc1-38d3-49c3-a03c-c6396c979491 e56990b770b4e9a85342d86a177ebc59 hg38 Blood Derived Normal C3L-00019-31 -C3L-00019.WGS.T C3L-00019 GBM WGS tumor CPT0017430007 CPT0017430007.WholeGenome.RP-1303.bam 80024112915 BAM NA 4e087f50-76a6-45cd-9f47-bbffe624739d ce415eb217eaa57a7111310b543de405 hg19 Primary Tumor C3L-00019-01,C3L-00019-03 -C3L-00019.WGS.T.hg38 C3L-00019 GBM WGS tumor CPT0017430007 8cb0498b-f2ca-40d3-9850-0354f0c53f1e_gdc_realn.bam 120614061544 BAM NA 8a7a4858-0863-4975-a72a-dbb110efd70f b04a09269d7f9019bfa423b8545d6ceb hg38 Primary Tumor C3L-00019-01,C3L-00019-03 -C3L-00019.WXS.N C3L-00019 GBM WXS blood_normal CPT0015360002 CPT0015360002.WholeExome.RP-1303.bam 21240130920 BAM NA c6e2dc84-0d04-4b60-8154-9a80c3100b4d 39176c686d5652fc2cd628d4182e6c7e hg19 Blood Derived Normal C3L-00019-31 -C3L-00019.WXS.N.hg38 C3L-00019 GBM WXS blood_normal CPT0015360002 383c9539-9c57-47c4-90f3-c0453068ff6f_gdc_realn.bam 28804926659 BAM NA 60d54f61-0d56-45f9-b6a7-93e6c66af8c0 5a75f59606a89160460106fe0a154052 hg38 Blood Derived Normal C3L-00019-31 -C3L-00019.WXS.T C3L-00019 GBM WXS tumor CPT0017430007 CPT0017430007.WholeExome.RP-1303.bam 33155325547 BAM NA c14db7b9-5835-43df-bc59-e21a92bd3d90 95ad4143ff2c93fae6a48580d34fd353 hg19 Primary Tumor C3L-00019-01,C3L-00019-03 -C3L-00019.WXS.T.hg38 C3L-00019 GBM WXS tumor CPT0017430007 8cb0498b-f2ca-40d3-9850-0354f0c53f1e_gdc_realn.bam 45080992944 BAM NA a2b737a0-4c3a-4b5c-808b-21078d18fb8c c4e774875bbdc97dfee505a1d98c7cc9 hg38 Primary Tumor C3L-00019-01,C3L-00019-03 C3L-00026.MethArray.Green.A C3L-00026 CCRCC Methylation Array tissue_normal CPT0001510014 204930640083_R06C01_Grn.idat 13677885 IDAT Green 364ecfcb-69ae-48fe-a4cf-6f5234fc6071 94cc77c83d32ea9630ab070407f045d8 NA Solid Tissue Normal C3L-00026-06 C3L-00026.MethArray.Green.T C3L-00026 CCRCC Methylation Array tumor CPT0001500005 201557560049_R04C01_Grn.idat 13676231 IDAT Green 7c2b8116-e486-4120-b402-73f9e001f138 14147deb18e98d04f27dd3946930ccc7 NA Primary Tumor C3L-00026-01 C3L-00026.MethArray.Red.A C3L-00026 CCRCC Methylation Array tissue_normal CPT0001510014 204930640083_R06C01_Red.idat 13677885 IDAT Red a10b34be-2a2f-4e6c-bcd4-31bab525e8ab 2173932ccbdf924dfafad1983b9078f0 NA Solid Tissue Normal C3L-00026-06 @@ -1284,6 +1251,10 @@ C3L-00079.RNA-Seq.R2.A C3L-00079 CCRCC RNA-Seq tissue_normal CPT0001270006 17120 C3L-00079.RNA-Seq.R2.T C3L-00079 CCRCC RNA-Seq tumor CPT0001260164 170802_UNC31-K00269_0072_AHK3GVBBXX_GTGGCC_S24_L007_R2_001.fastq.gz 4337346188 FASTQ NA 8dc8eb7a-c5f2-4bfd-a190-d62f38d82ada 2680b3778eaad97464eda1a61a1ae574 NA Primary Tumor C3L-00079-01 C3L-00079.RNA-Seq.transcriptome.A.hg38 C3L-00079 CCRCC RNA-Seq tissue_normal CPT0001270006 0f709910-bda7-49ee-ac17-eed7477f79f1.rna_seq.transcriptome.gdc_realn.bam 10037580390 BAM transcriptome 321d038f-86b1-4899-b168-80121e52a8c9 d683745c677a12cd61bc7210ff905ecf hg38 Solid Tissue Normal C3L-00079-06 C3L-00079.RNA-Seq.transcriptome.T.hg38 C3L-00079 CCRCC RNA-Seq tumor CPT0001260164 24314fd5-f34b-417f-862b-98988c2a92b1.rna_seq.transcriptome.gdc_realn.bam 11312942767 BAM transcriptome d130ff4e-24f5-4fac-b5aa-622de9aa6e43 f366d5a534f5c57ca58bf43ccbbaeee1 hg38 Primary Tumor C3L-00079-01 +C3L-00079.scRNA-Seq.R1.T C3L-00079 CCRCC scRNA-Seq tumor CPT0001260014 20220404_WUSTL_TWHG-CPT0001260014-Y1N1Z1_1Bmn1_1_ATGGCTTGTG+CACAACATTC_S5_L004_R1_001.fastq.gz 3290649461 FASTQ NA 0c29f30c-1684-4639-a8a8-a138423d17ba 5af6dd1a8d37ffe75ff759aa57b73d30 NA Primary Tumor C3L-00079-01 +C3L-00079.scRNA-Seq.R1.T C3L-00079 CCRCC scRNA-Seq tumor CPT0001260014 20220404_WUSTL_TWHG-CPT0001260014-Y1N1Z1_1Bmn1_1_ATGGCTTGTG+GAATGTTGTG_S4_L004_R1_001.fastq.gz 2444698172 FASTQ NA 04cb9c3e-86fd-4699-aac6-b932a07b84fa f6e9b5312f168f441d86389ec46b57c6 NA Primary Tumor C3L-00079-01 +C3L-00079.scRNA-Seq.R2.T C3L-00079 CCRCC scRNA-Seq tumor CPT0001260014 20220404_WUSTL_TWHG-CPT0001260014-Y1N1Z1_1Bmn1_1_ATGGCTTGTG+CACAACATTC_S5_L004_R2_001.fastq.gz 11874489370 FASTQ NA 0de46f5a-2c28-4451-b953-e8c06549aebd 0cabc36ed002a34925b3d48c1e24f6f0 NA Primary Tumor C3L-00079-01 +C3L-00079.scRNA-Seq.R2.T C3L-00079 CCRCC scRNA-Seq tumor CPT0001260014 20220404_WUSTL_TWHG-CPT0001260014-Y1N1Z1_1Bmn1_1_ATGGCTTGTG+GAATGTTGTG_S4_L004_R2_001.fastq.gz 8830325502 FASTQ NA c3a6d4d8-8bb1-4e88-b395-a099c9459783 6990d3f2551533a3f23d9ff5a8f9cd48 NA Primary Tumor C3L-00079-01 C3L-00079.WGS.A C3L-00079 CCRCC WGS tissue_normal CPT0001270009 CPT0001270009.WholeGenome.RP-1303.bam 54535504797 BAM NA fda8e552-9732-45cc-8c81-51ea6dceab92 c68d57c401181279f045ca0f33f137ac hg19 Solid Tissue Normal C3L-00079-06 C3L-00079.WGS.A.hg38 C3L-00079 CCRCC WGS tissue_normal CPT0001270009 66a0c38b-0783-488a-946b-85127b719408_wgs_gdc_realn.bam 80842969899 BAM NA f27a1987-e3ff-4f15-90bd-2c5054b92f62 4cb8ab424ad7641556b52924d50c485b hg38 Solid Tissue Normal C3L-00079-06 C3L-00079.WGS.N C3L-00079 CCRCC WGS blood_normal CPT0000070163 CPT0000070163.WholeGenome.RP-1303.bam 102959018874 BAM NA 089f0221-be6c-4088-9ec9-945b2282cee9 39d1734d63694fa4aa5fd95461862440 hg19 Blood Derived Normal C3L-00079-31 @@ -1386,23 +1357,6 @@ C3L-00083.WXS.N C3L-00083 LUAD WXS blood_normal CPT0093680002 CPT0093680002.Whol C3L-00083.WXS.N.hg38 C3L-00083 LUAD WXS blood_normal CPT0093680002 2eddaefa-786d-42e4-ab02-e94a893a9441_wxs_gdc_realn.bam 51977545772 BAM NA eb54888f-3169-491f-a385-0bbe85db98b3 f6aa032768b8e4718df4183b96d334c9 hg38 Blood Derived Normal C3L-00083-31 C3L-00083.WXS.T C3L-00083 LUAD WXS tumor CPT0091860013 CPT0091860013.WholeExome.RP-1303.bam 28072671557 BAM NA 79089e6c-52a2-4d25-b3e4-e5830e3d6a87 d905106a65f5bf14535563034c63af15 hg19 Primary Tumor C3L-00083-01 C3L-00083.WXS.T.hg38 C3L-00083 LUAD WXS tumor CPT0091860013 560018e3-da42-4581-b77d-db661cb3a7b4_wxs_gdc_realn.bam 38196988685 BAM NA abcf3517-4f77-450e-8bbd-bd7bb7f40077 b32986eb2118352d97d386f6d44011f8 hg38 Primary Tumor C3L-00083-01 -C3L-00084.MethArray.Green.T C3L-00084 UCEC Methylation Array tumor CPT0000820005 201557560056_R07C01_Grn.idat 13676231 IDAT Green f8dbb541-eb1a-46c8-8263-b3e3cc9186e6 476894a2affe50bb65258d2c7ae16590 NA Primary Tumor C3L-00084-01 -C3L-00084.MethArray.Red.T C3L-00084 UCEC Methylation Array tumor CPT0000820005 201557560056_R07C01_Red.idat 13676231 IDAT Red c1a8f4a6-4acd-45da-a196-37bedc53fe81 f306ecef1374a1a6e7e997a3913911be NA Primary Tumor C3L-00084-01 -C3L-00084.miRNA-Seq.T C3L-00084 UCEC miRNA-Seq tumor CPT0000820008 181012_UNC32-K00270_0124_AH223CBBXY_ATCACG_S22_L002_R1_001.unaln.bam 193779151 BAM NA ad107ad9-5bf9-4aec-a8b8-2ac68a859bcf 8909ecfb466c93ff7ccaf2e15988f719 NA Primary Tumor C3L-00084-01 -C3L-00084.miRNA-Seq.T.hg38 C3L-00084 UCEC miRNA-Seq tumor CPT0000820008 a8d6311a-0d73-429a-8e65-1c40116892a4_mirnaseq_gdc_realn.bam 213551415 BAM NA 11d6da3d-c5f6-4b04-b79e-89a0668e5ea1 cf53074e48692389034d99b3aa11818b hg38 Primary Tumor C3L-00084-01 -C3L-00084.RNA-Seq.chimeric.T.hg38 C3L-00084 UCEC RNA-Seq tumor CPT0000820008 12bb3339-5a04-4675-8ca8-3f4eda2b10db.rna_seq.chimeric.gdc_realn.bam 146783115 BAM chimeric c0aa1264-34f9-498e-a229-04dec8566253 17c9ae568082a91a4f16bc0e1bbdb562 hg38 Primary Tumor C3L-00084-01 -C3L-00084.RNA-Seq.genomic.T.hg38 C3L-00084 UCEC RNA-Seq tumor CPT0000820008 12bb3339-5a04-4675-8ca8-3f4eda2b10db.rna_seq.genomic.gdc_realn.bam 7118566916 BAM genomic 7ff211fd-8e48-4222-b258-7fd4f74697c6 e2f20f42b0ef00544e783b0eefcb6db0 hg38 Primary Tumor C3L-00084-01 -C3L-00084.RNA-Seq.R1.T C3L-00084 UCEC RNA-Seq tumor CPT0000820008 170818_UNC32-K00270_0050_AHL2FHBBXX_ATCACG_S5_L002_R1_001.fastq.gz 3463534382 FASTQ NA b0a7cdf2-2ad8-4442-91b0-548ea4975554 1bb222621c073fde3b7cabdd8e4ae0b0 NA Primary Tumor C3L-00084-01 -C3L-00084.RNA-Seq.R2.T C3L-00084 UCEC RNA-Seq tumor CPT0000820008 170818_UNC32-K00270_0050_AHL2FHBBXX_ATCACG_S5_L002_R2_001.fastq.gz 3578027014 FASTQ NA c83987a5-1c13-4af4-b46c-218fe5f60c34 5e2de48f0ee1fee78ae57f1362ba0151 NA Primary Tumor C3L-00084-01 -C3L-00084.RNA-Seq.transcriptome.T.hg38 C3L-00084 UCEC RNA-Seq tumor CPT0000820008 12bb3339-5a04-4675-8ca8-3f4eda2b10db.rna_seq.transcriptome.gdc_realn.bam 8149947669 BAM transcriptome 3d745cb1-7b59-4cc8-85be-fd6d3fdb4232 26133fdbc4dad796dca3a1a771802bb7 hg38 Primary Tumor C3L-00084-01 -C3L-00084.WGS.N C3L-00084 UCEC WGS blood_normal CPT0003880002 CPT0003880002.WholeGenome.RP-1303.bam 139304445976 BAM NA 9986965d-3fb8-4479-be4b-cc565180e4b9 ee3b17375e9316d25c743932abe4587e hg19 Blood Derived Normal C3L-00084-31 -C3L-00084.WGS.N.hg38 C3L-00084 UCEC WGS blood_normal CPT0003880002 b0c06553-0088-41fd-a0de-fecc9bb6574a_gdc_realn.bam 203220813830 BAM NA edc0e018-cb28-4bf3-b1ff-39490924e401 c953daa5c444b419c7c706e2bb6d1561 hg38 Blood Derived Normal C3L-00084-31 -C3L-00084.WGS.T C3L-00084 UCEC WGS tumor CPT0000820005 CPT0000820005.WholeGenome.RP-1303.bam 139008147447 BAM NA 24ff3308-16da-4ba9-b05f-7b2d475e09bc 91f50522fa02805ac302ade888740e53 hg19 Primary Tumor C3L-00084-01 -C3L-00084.WGS.T.hg38 C3L-00084 UCEC WGS tumor CPT0000820005 e58981f9-0125-452a-9a6a-ad0c3116ebdd_gdc_realn.bam 201242866841 BAM NA f6eac4de-7732-414b-bcd2-de1bab0a00a3 7bfac2d5a7f6f7e1cb9c2581e3a0e4a9 hg38 Primary Tumor C3L-00084-01 -C3L-00084.WXS.N C3L-00084 UCEC WXS blood_normal CPT0003880002 CPT0003880002.WholeExome.RP-1303.bam 32223062612 BAM NA 8133defc-29fa-4d3c-967e-999106a6b1c8 c4d0cff6d82bb94e5a63d5d4452167ec hg19 Blood Derived Normal C3L-00084-31 -C3L-00084.WXS.N.hg38 C3L-00084 UCEC WXS blood_normal CPT0003880002 b0c06553-0088-41fd-a0de-fecc9bb6574a_gdc_realn.bam 44956483784 BAM NA 085f713e-b95c-4b59-ae60-22b70e8f499d 076e53ca7c46986bf1d9a4688f9aa506 hg38 Blood Derived Normal C3L-00084-31 -C3L-00084.WXS.T C3L-00084 UCEC WXS tumor CPT0000820005 CPT0000820005.WholeExome.RP-1303.bam 33097105372 BAM NA 9a94e4e1-4a97-4736-90cf-e1801dbe2907 24b72aef6f6a16e897dcac0a4571d40b hg19 Primary Tumor C3L-00084-01 -C3L-00084.WXS.T.hg38 C3L-00084 UCEC WXS tumor CPT0000820005 e58981f9-0125-452a-9a6a-ad0c3116ebdd_gdc_realn.bam 44569198647 BAM NA d09a2cf2-6b59-43ca-aeea-494f099f879e 37e27811df5507cce0dfd81185cfc5de hg38 Primary Tumor C3L-00084-01 C3L-00086.MethArray.Green.T C3L-00086 UCEC Methylation Array tumor CPT0092460009 202234380064_R08C01_Grn.idat 13676231 IDAT Green daa042f4-bc3f-4ade-90fc-ec2f7d9e4761 dad11ef067eb42f44537035f5df1cd99 NA Primary Tumor C3L-00086-01 C3L-00086.MethArray.Red.T C3L-00086 UCEC Methylation Array tumor CPT0092460009 202234380064_R08C01_Red.idat 13676231 IDAT Red 45573c0d-dcf2-4ccc-a349-8eccefabcde2 28aeec7520ee22ef04551f8abc1f1e7c NA Primary Tumor C3L-00086-01 C3L-00086.miRNA-Seq.T C3L-00086 UCEC miRNA-Seq tumor CPT0092460006 180724_UNC32-K00270_0106_BHWK3MBBXX_CATTTT_S11_L007_R1_001.unaln.bam 225683753 BAM NA f65c15fb-bfbd-46dc-8419-a358ccd647bf de9a591aeab42b85dfe67131a67504b6 NA Primary Tumor C3L-00086-01 @@ -2080,40 +2034,6 @@ C3L-00263.WXS.N C3L-00263 LUAD WXS blood_normal CPT0012420002 CPT0012420002.Whol C3L-00263.WXS.N.hg38 C3L-00263 LUAD WXS blood_normal CPT0012420002 2a51eed2-4a78-45ad-8209-d87968005886_gdc_realn.bam 32550839521 BAM NA e00e1c39-2d9a-4cc3-98b4-1865ccf237ea cd3dd2464188b4ec0f5f39df6fe9c648 hg38 Blood Derived Normal C3L-00263-31 C3L-00263.WXS.T C3L-00263 LUAD WXS tumor CPT0011710007 CPT0011710007.WholeExome.RP-1303.bam 25435515814 BAM NA c2150250-a1f4-47f9-83d4-6ac798b2248f ffc433c45ff837fc5b15e4eae67b04f1 hg19 Primary Tumor C3L-00263-04,C3L-00263-05 C3L-00263.WXS.T.hg38 C3L-00263 LUAD WXS tumor CPT0011710007 f0c8f826-d8fd-4c98-9717-6cca974055dc_gdc_realn.bam 34897668803 BAM NA f5f667d2-69bd-4d09-a03a-3cc9932bfcea 4b6d9dfe1ab977291dec24dad699160b hg38 Primary Tumor C3L-00263-04,C3L-00263-05 -C3L-00265.MethArray.Green.T C3L-00265 GBM Methylation Array tumor CPT0011440007 202176290047_R06C01_Grn.idat 13676226 IDAT Green 8ea8f1f3-06bf-4cb9-a2c0-a62b20e39bbc d2b101c884f45f6614d87d6c9921a11d NA Primary Tumor C3L-00265-03,C3L-00265-04 -C3L-00265.MethArray.Red.T C3L-00265 GBM Methylation Array tumor CPT0011440007 202176290047_R06C01_Red.idat 13676226 IDAT Red 8a445b31-c3d2-423e-9fc5-d5865e249f46 69e52f3377163bdc21e08e39a6b49db9 NA Primary Tumor C3L-00265-03,C3L-00265-04 -C3L-00265.miRNA-Seq.T C3L-00265 GBM miRNA-Seq tumor CPT0011440010 181012_UNC32-K00270_0124_AH223CBBXY_GTGGCC_S40_L004_R1_001.unaln.bam 264945923 BAM NA fc8c426a-ad65-4db0-843b-aa0a48d2785f cac71633b91a309ff1dc239a39af31ba NA Primary Tumor C3L-00265-03,C3L-00265-04 -C3L-00265.miRNA-Seq.T.hg38 C3L-00265 GBM miRNA-Seq tumor CPT0011440010 e8d52b7c-4ede-439f-8d7e-07effde162e7_mirnaseq_gdc_realn.bam 296073120 BAM NA 2aac854c-5e86-434f-8934-abec19c5047f eed0494f93cc19baa32ca82adb39c96b hg38 Primary Tumor C3L-00265-03,C3L-00265-04 -C3L-00265.RNA-Seq.chimeric.T.hg38 C3L-00265 GBM RNA-Seq tumor CPT0011440010 097c15d9-d3d1-4a30-b836-7e03ae78e2ff.rna_seq.chimeric.gdc_realn.bam 79606763 BAM chimeric 1c8e3f4d-188f-47b1-98fb-74b3f1812f66 04600fee80c9b067cb7bb3d3bb96c2cb hg38 Primary Tumor C3L-00265-03,C3L-00265-04 -C3L-00265.RNA-Seq.genomic.T.hg38 C3L-00265 GBM RNA-Seq tumor CPT0011440010 097c15d9-d3d1-4a30-b836-7e03ae78e2ff.rna_seq.genomic.gdc_realn.bam 8677131539 BAM genomic ab7a5c3b-1c30-4cdf-b0a6-55816e3f46e7 ef9e2867210a164e81331f49c72abbc8 hg38 Primary Tumor C3L-00265-03,C3L-00265-04 -C3L-00265.RNA-Seq.R1.T C3L-00265 GBM RNA-Seq tumor CPT0011440010 170818_UNC32-K00270_0051_BHLCCHBBXX_GTGAAA_S1_L001_R1_001.fastq.gz 3737193939 FASTQ NA 02ff01eb-0972-4d0a-85b5-b4b099fc1854 7a4594ad7067384e680062a193c03e6c NA Primary Tumor C3L-00265-03,C3L-00265-04 -C3L-00265.RNA-Seq.R2.T C3L-00265 GBM RNA-Seq tumor CPT0011440010 170818_UNC32-K00270_0051_BHLCCHBBXX_GTGAAA_S1_L001_R2_001.fastq.gz 3890014097 FASTQ NA 060e65f9-e379-4618-865d-3b10bf8fbbad 056450f39caec3cbb97a5f883987dca3 NA Primary Tumor C3L-00265-03,C3L-00265-04 -C3L-00265.RNA-Seq.transcriptome.T.hg38 C3L-00265 GBM RNA-Seq tumor CPT0011440010 097c15d9-d3d1-4a30-b836-7e03ae78e2ff.rna_seq.transcriptome.gdc_realn.bam 12706651949 BAM transcriptome 3e0dda72-25fc-47cc-8cc1-df1de96b4594 38c088c3623b50eddfd6c81f99f1c555 hg38 Primary Tumor C3L-00265-03,C3L-00265-04 -C3L-00265.WGS.N C3L-00265 GBM WGS blood_normal CPT0012430002 CPT0012430002.WholeGenome.RP-1303.bam 72080622489 BAM NA 1cc9db02-a4a4-42dd-bc03-d441310da2f8 8ebf4bb674d939afb2444c126d0cbe42 hg19 Blood Derived Normal C3L-00265-31 -C3L-00265.WGS.N.hg38 C3L-00265 GBM WGS blood_normal CPT0012430002 6a73f3b9-56b8-4007-ad6f-7dbc00f85a4c_gdc_realn.bam 108566070050 BAM NA 49abd759-c4f2-4a40-8f59-153c9bb19170 9fc30ad0aae9bd0f858cacdffe08136d hg38 Blood Derived Normal C3L-00265-31 -C3L-00265.WGS.T C3L-00265 GBM WGS tumor CPT0011440007 CPT0011440007.WholeGenome.RP-1303.bam 62644753965 BAM NA 6ff3323b-e156-4fdc-9694-0331c08d53f8 7a3e2677199f92887fda7aab57bfb491 hg19 Primary Tumor C3L-00265-03,C3L-00265-04 -C3L-00265.WGS.T.hg38 C3L-00265 GBM WGS tumor CPT0011440007 19a44d3b-775c-44db-aaf0-f16fe219c7b9_gdc_realn.bam 92485616116 BAM NA 235e63ba-8a7d-4183-b146-4bbef059d377 86354381f7adfc33cfe9d421f8de4062 hg38 Primary Tumor C3L-00265-03,C3L-00265-04 -C3L-00265.WXS.N C3L-00265 GBM WXS blood_normal CPT0012430002 CPT0012430002.WholeExome.RP-1303.bam 41168990702 BAM NA e0392f5b-1179-4748-98a5-c19a141ecb34 b44a447ef9f931dddecf299b3e2fbbe7 hg19 Blood Derived Normal C3L-00265-31 -C3L-00265.WXS.N.hg38 C3L-00265 GBM WXS blood_normal CPT0012430002 6a73f3b9-56b8-4007-ad6f-7dbc00f85a4c_gdc_realn.bam 56572257493 BAM NA 44ee4bea-4f5b-4e67-87d9-ad717cc5b72d 9b7dd9714454661757bde3685d2b9c96 hg38 Blood Derived Normal C3L-00265-31 -C3L-00265.WXS.T C3L-00265 GBM WXS tumor CPT0011440007 CPT0011440007.WholeExome.RP-1303.bam 27021649142 BAM NA 0efe5a69-29db-4b5e-9740-75c7314e1a9d 853b2093438946fa4a91b59a2e6671f6 hg19 Primary Tumor C3L-00265-03,C3L-00265-04 -C3L-00265.WXS.T.hg38 C3L-00265 GBM WXS tumor CPT0011440007 19a44d3b-775c-44db-aaf0-f16fe219c7b9_gdc_realn.bam 37106010205 BAM NA 2df40997-ebe8-45cc-a937-838b002bf86a f3efc6529962817e71e832f8105dd8ed hg38 Primary Tumor C3L-00265-03,C3L-00265-04 -C3L-00275.MethArray.Green.T C3L-00275 CM Methylation Array tumor CPT0000370006 202234380024_R05C01_Grn.idat 13676246 IDAT Green 773d1640-5467-49e5-a250-c3b86c0d93b8 6c385f314e1da466488634a2c2ebcba9 NA Primary Tumor C3L-00275-02 -C3L-00275.MethArray.Red.T C3L-00275 CM Methylation Array tumor CPT0000370006 202234380024_R05C01_Red.idat 13676246 IDAT Red c352bfd5-8576-4fd1-80d8-0711c44ea7ae fb63a1433e3a11a96cd0c55b6ec0ac82 NA Primary Tumor C3L-00275-02 -C3L-00275.miRNA-Seq.T C3L-00275 CM miRNA-Seq tumor CPT0000370009 190828_UNC32-K00270_0200_BH7GVJBBXY_CACTCA_S141_L008_R1_001.unaln.bam 213057023 BAM NA b7b3c278-21f1-4b31-bbf4-4a9b816cfb03 0dd1e373ed3f3d7b9b1d730aaf26b30e NA Primary Tumor C3L-00275-02 -C3L-00275.miRNA-Seq.T.hg38 C3L-00275 CM miRNA-Seq tumor CPT0000370009 2207a8f1-0a0e-4778-8e4b-a5739c396a60_mirnaseq_gdc_realn.bam 233282438 BAM NA b9ba0ea7-e892-493b-9e4b-33ca32c4d1dd 22afdf4018176030439527215228979d hg38 Primary Tumor C3L-00275-02 -C3L-00275.RNA-Seq.chimeric.T.hg38 C3L-00275 CM RNA-Seq tumor CPT0000370009 d2a75fa4-d62a-4f34-aeca-a00013c68af5.rna_seq.chimeric.gdc_realn.bam 103756589 BAM chimeric 893e3f8e-1e63-4899-a2eb-9d0c84fb0869 29c2b5eb515ebf51c91f291ecb09e09f hg38 Primary Tumor C3L-00275-02 -C3L-00275.RNA-Seq.genomic.T.hg38 C3L-00275 CM RNA-Seq tumor CPT0000370009 d2a75fa4-d62a-4f34-aeca-a00013c68af5.rna_seq.genomic.gdc_realn.bam 10430102843 BAM genomic 547aeacb-8a47-4de1-b397-119dc26ff2a3 7783fc1344c1dcd9e7aec10767bd70d4 hg38 Primary Tumor C3L-00275-02 -C3L-00275.RNA-Seq.R1.T C3L-00275 CM RNA-Seq tumor CPT0000370009 171109_UNC31-K00269_0091_BHMFGTBBXX_TAGCTT_S2_L001_R1_001.fastq.gz 4637357806 FASTQ NA 310fdc25-f963-4ce6-b5a3-e2f046bf12d0 9a184b268b11510f928b4a79e035ecf0 NA Primary Tumor C3L-00275-02 -C3L-00275.RNA-Seq.R2.T C3L-00275 CM RNA-Seq tumor CPT0000370009 171109_UNC31-K00269_0091_BHMFGTBBXX_TAGCTT_S2_L001_R2_001.fastq.gz 5279806733 FASTQ NA a69bce17-00f5-45e4-8f3d-344b6d0734de 8b2d9c908326bc3587c2331317be943b NA Primary Tumor C3L-00275-02 -C3L-00275.RNA-Seq.transcriptome.T.hg38 C3L-00275 CM RNA-Seq tumor CPT0000370009 d2a75fa4-d62a-4f34-aeca-a00013c68af5.rna_seq.transcriptome.gdc_realn.bam 13669822380 BAM transcriptome 97b3417c-31eb-4e84-9cb8-b0c1af7c612f 5a8df7315d906bc620f11bd2ecf2017c hg38 Primary Tumor C3L-00275-02 -C3L-00275.WGS.N C3L-00275 CM WGS blood_normal CPT0000590002 CPT0000590002.WholeGenome.RP-1303.bam 66786276638 BAM NA fc6ed4e8-5e1b-479a-9485-2bb129246520 0614968d30e515e600f95a59fd0ae58f hg19 Blood Derived Normal C3L-00275-31 -C3L-00275.WGS.N.hg38 C3L-00275 CM WGS blood_normal CPT0000590002 e2b95b95-f73e-413c-81be-140996dc3212_wgs_gdc_realn.bam 96647760322 BAM NA ae430219-2c8a-4a1e-8a00-2f5074ea0521 5c03e775568aaf6233cf7dddcf06fe8d hg38 Blood Derived Normal C3L-00275-31 -C3L-00275.WGS.T C3L-00275 CM WGS tumor CPT0000370006 CPT0000370006.WholeGenome.RP-1303.bam 69699562445 BAM NA e803819e-dfdc-48de-8dad-86abef237136 acd3ea3bc9f07f626b39e1f37155d7e7 hg19 Primary Tumor C3L-00275-02 -C3L-00275.WGS.T.hg38 C3L-00275 CM WGS tumor CPT0000370006 1765141c-3d32-4acd-869c-bc27256f9687_wgs_gdc_realn.bam 99100876814 BAM NA b61501e1-a611-420c-96fc-94c4a7edf06d c1795e4f7f5efbe19f7c53b164bcdadb hg38 Primary Tumor C3L-00275-02 -C3L-00275.WXS.N C3L-00275 CM WXS blood_normal CPT0000590002 CPT0000590002.WholeExome.RP-1303.bam 33687876337 BAM NA a5a7b0b2-271b-418a-be50-dd8d19c42ee3 bcbb0d644d1cbe600384806bc2b9174b hg19 Blood Derived Normal C3L-00275-31 -C3L-00275.WXS.N.hg38 C3L-00275 CM WXS blood_normal CPT0000590002 e2b95b95-f73e-413c-81be-140996dc3212_wxs_gdc_realn.bam 46319804790 BAM NA 1e887644-0a77-41d5-a6f0-7c70fe25b038 bd2d538d94b690be0ab02b40e1e98d3a hg38 Blood Derived Normal C3L-00275-31 -C3L-00275.WXS.T C3L-00275 CM WXS tumor CPT0000370006 CPT0000370006.WholeExome.RP-1303.bam 40326419925 BAM NA 6f8e24ef-947c-4fac-b4d9-bd305976d4e1 58f49aecbd1a7f1bc31c82fa32b4d473 hg19 Primary Tumor C3L-00275-02 -C3L-00275.WXS.T.hg38 C3L-00275 CM WXS tumor CPT0000370006 1765141c-3d32-4acd-869c-bc27256f9687_wxs_gdc_realn.bam 54372024500 BAM NA 85da0ee2-26ac-49ff-a14f-c3385b47b716 9c1719e541ea63372ae53f65db0ec839 hg38 Primary Tumor C3L-00275-02 C3L-00277.MethArray.Green.A C3L-00277 PDA Methylation Array tissue_normal CPT0011540010 203561450100_R08C01_Grn.idat 13676221 IDAT Green 0b313bca-83ab-4697-b531-bec5ed9e7876 0a62cacfbf7a9eaffd6429d64f1be611 NA Solid Tissue Normal C3L-00277-05 C3L-00277.MethArray.Green.T C3L-00277 PDA Methylation Array tumor CPT0011520006 202178770111_R06C01_Grn.idat 13676231 IDAT Green 722a2690-7457-4024-841b-cd867b8d6c3f 61670a4a342e459cdc68fcbcd9c026fd NA Primary Tumor C3L-00277-03 C3L-00277.MethArray.Red.A C3L-00277 PDA Methylation Array tissue_normal CPT0011540010 203561450100_R08C01_Red.idat 13676221 IDAT Red 3b5a1b08-ba1c-4c70-8f30-955798650cf5 819962c831fa7a43fe3e23c9e3089448 NA Solid Tissue Normal C3L-00277-05 @@ -2141,23 +2061,6 @@ C3L-00277.WXS.T C3L-00277 PDA WXS tumor CPT0011520006 CPT0011520006.WholeExome.R C3L-00277.WXS.T.hg38 C3L-00277 PDA WXS tumor CPT0011520006 5d5bbdb1-74e4-4f1d-a025-df1959b77aa1_gdc_realn.bam 34758091873 BAM NA 0fc758f7-93a6-40f6-a12a-1fa472439af0 34ba83eefe360258ad925e44eb03138e hg38 Primary Tumor C3L-00277-03 C3L-00277.WXS.T.hg38.high_cov C3L-00277 PDA WXS tumor CPT0011520006_1 58cdfc92-0d6b-46b3-94dd-28f1a5a247dd_wxs_gdc_realn.bam 76363859370 BAM NA 5b6d0cc0-46f2-496c-8d5c-30b5a712ceaa c42b16534537e0a6200d02f457466995 hg38 Primary Tumor C3L-00277-03 local_meta=.high_cov C3L-00277.WXS.T.high_cov C3L-00277 PDA WXS tumor CPT0011520006_1 CPT0011520006_1.WholeExome.RP-1303.bam 55645657340 BAM NA db5a4047-cc88-4497-ac9b-8cdbb98f8f78 61d2f9d1fb3dd8624c68972e19c1e23c hg19 Primary Tumor C3L-00277-03 local_meta=.high_cov -C3L-00278.MethArray.Green.T C3L-00278 GBM Methylation Array tumor CPT0000430002 202184990052_R08C01_Grn.idat 13676226 IDAT Green 57007e75-15da-49dd-9621-1c6bdbf7d23c a4f899bbe505583c524530100a5aa79d NA Primary Tumor C3L-00278-02,C3L-00278-03 -C3L-00278.MethArray.Red.T C3L-00278 GBM Methylation Array tumor CPT0000430002 202184990052_R08C01_Red.idat 13676226 IDAT Red 8a4c4b6f-3046-4e45-a658-b2ea12e92ed2 14370fb4c78c178272d40ec071729fcc NA Primary Tumor C3L-00278-02,C3L-00278-03 -C3L-00278.miRNA-Seq.T C3L-00278 GBM miRNA-Seq tumor CPT0000430008 181012_UNC32-K00270_0124_AH223CBBXY_GGCTAC_S32_L002_R1_001.unaln.bam 254899906 BAM NA fc74dee6-efdf-4b55-bfb2-969e447ea5fa 80e6de9f7ef9429a9cb30b69aa027fff NA Primary Tumor C3L-00278-02,C3L-00278-03 -C3L-00278.miRNA-Seq.T.hg38 C3L-00278 GBM miRNA-Seq tumor CPT0000430008 29d2678c-fbce-4cc9-acce-057e56966139_mirnaseq_gdc_realn.bam 282329723 BAM NA 73e8c962-1a05-4de6-8c69-9574c6b8fd52 0ad2982e366801c50e93ee9a624a028a hg38 Primary Tumor C3L-00278-02,C3L-00278-03 -C3L-00278.RNA-Seq.chimeric.T.hg38 C3L-00278 GBM RNA-Seq tumor CPT0000430008 69706fd1-eef0-46cb-bd99-d279cc4c5012.rna_seq.chimeric.gdc_realn.bam 119911281 BAM chimeric e2f04b5e-0312-465c-9767-96336fcb0b20 789ccdd50350c02c70952db1080c3f9c hg38 Primary Tumor C3L-00278-02,C3L-00278-03 -C3L-00278.RNA-Seq.genomic.T.hg38 C3L-00278 GBM RNA-Seq tumor CPT0000430008 69706fd1-eef0-46cb-bd99-d279cc4c5012.rna_seq.genomic.gdc_realn.bam 8422431264 BAM genomic ae7fd217-6e78-45d3-baf0-18fb46a143f6 31bba17b51beb606ab44b457b5106167 hg38 Primary Tumor C3L-00278-02,C3L-00278-03 -C3L-00278.RNA-Seq.R1.T C3L-00278 GBM RNA-Seq tumor CPT0000430008 170818_UNC32-K00270_0050_AHL2FHBBXX_AGTCAA_S11_L003_R1_001.fastq.gz 3807428132 FASTQ NA 8602e4ce-ab89-4841-aad5-97737a5dc01e 1ba061ebaa32446efa675ef85590c32e NA Primary Tumor C3L-00278-02,C3L-00278-03 -C3L-00278.RNA-Seq.R2.T C3L-00278 GBM RNA-Seq tumor CPT0000430008 170818_UNC32-K00270_0050_AHL2FHBBXX_AGTCAA_S11_L003_R2_001.fastq.gz 4097790684 FASTQ NA 3b826fe0-20cd-43f8-b81e-a8a38e7c8d01 468fee694ea2b02c8237c4a1de572e93 NA Primary Tumor C3L-00278-02,C3L-00278-03 -C3L-00278.RNA-Seq.transcriptome.T.hg38 C3L-00278 GBM RNA-Seq tumor CPT0000430008 69706fd1-eef0-46cb-bd99-d279cc4c5012.rna_seq.transcriptome.gdc_realn.bam 8306611498 BAM transcriptome 4adf03ca-765d-4c26-aa1f-c697c239f588 1c3c9c529e7af1e721bfafdb47e3340d hg38 Primary Tumor C3L-00278-02,C3L-00278-03 -C3L-00278.WGS.N C3L-00278 GBM WGS blood_normal CPT0000600002 CPT0000600002.WholeGenome.RP-1303.bam 77124375336 BAM NA f4e6a159-946e-4db4-aa2e-b0e2a6d9e46d bcf50f496c5174ace2ca61aeb58d9086 hg19 Blood Derived Normal C3L-00278-31 -C3L-00278.WGS.N.hg38 C3L-00278 GBM WGS blood_normal CPT0000600002 d4bac28e-6b0d-4f9b-8bb6-9785ccd8d8ec_gdc_realn.bam 115293749793 BAM NA d799361e-0e2c-478f-a3b8-4e371dd47ea3 122ed6eb96112d0a4fd06a68e37b6ee2 hg38 Blood Derived Normal C3L-00278-31 -C3L-00278.WGS.T C3L-00278 GBM WGS tumor CPT0000430002 CPT0000430002.WholeGenome.RP-1303.bam 73086590689 BAM NA 8fbc42cb-c98d-47d5-95b0-46286fdc6949 2784d8b2803ae0cb2f1e14e24d05eec7 hg19 Primary Tumor C3L-00278-02,C3L-00278-03 -C3L-00278.WGS.T.hg38 C3L-00278 GBM WGS tumor CPT0000430002 a2c60332-44c4-4103-9333-c22d7ae59578_gdc_realn.bam 109090599494 BAM NA 88697b09-149a-4099-9f68-a1aed95fefe6 5be316f7e846ab6c64148753fdedd383 hg38 Primary Tumor C3L-00278-02,C3L-00278-03 -C3L-00278.WXS.N C3L-00278 GBM WXS blood_normal CPT0000600002 CPT0000600002.WholeExome.RP-1303.bam 16212564171 BAM NA 0c886065-62aa-468d-99ed-ddfe292a94cf 6dec23d6c46960842221800f3777219e hg19 Blood Derived Normal C3L-00278-31 -C3L-00278.WXS.N.hg38 C3L-00278 GBM WXS blood_normal CPT0000600002 d4bac28e-6b0d-4f9b-8bb6-9785ccd8d8ec_gdc_realn.bam 22316074373 BAM NA 796ed8c7-f6ca-4c4f-9723-09e656a1f0a1 ab9a37da8117a065ea8a09125a4c4de9 hg38 Blood Derived Normal C3L-00278-31 -C3L-00278.WXS.T C3L-00278 GBM WXS tumor CPT0000430002 CPT0000430002.WholeExome.RP-1303.bam 33215403612 BAM NA 67b85cdd-1d28-40f4-8933-82c2067ea308 73c905de5479d8ffff4d4ebc433c3535 hg19 Primary Tumor C3L-00278-02,C3L-00278-03 -C3L-00278.WXS.T.hg38 C3L-00278 GBM WXS tumor CPT0000430002 a2c60332-44c4-4103-9333-c22d7ae59578_gdc_realn.bam 45375796418 BAM NA 8e9a3635-2e1f-4fb7-bde5-20edff56b6c6 6c55908bcd79ad781f14add1c83dab28 hg38 Primary Tumor C3L-00278-02,C3L-00278-03 C3L-00279.MethArray.Green.A C3L-00279 LUAD Methylation Array tissue_normal CPT0082770009 203027390034_R02C01_Grn.idat 13676226 IDAT Green c66954a9-b6fb-46c2-a281-eaf582088084 82b4f3347729758c147804dd982e4ad2 NA Solid Tissue Normal C3L-00279-05 C3L-00279.MethArray.Green.T C3L-00279 LUAD Methylation Array tumor CPT0082740010 202178770143_R07C01_Grn.idat 13676241 IDAT Green 6472fb36-b647-44c2-9bf4-57453ce681eb 27fb5e82796d8bd41f8eca46d1a55536 NA Primary Tumor C3L-00279-02,C3L-00279-03 C3L-00279.MethArray.Red.A C3L-00279 LUAD Methylation Array tissue_normal CPT0082770009 203027390034_R02C01_Red.idat 13676226 IDAT Red 08d47b87-c26f-4ad4-978b-fd00f868264f f522601c590bbdc5f4ba324e0741ca47 NA Solid Tissue Normal C3L-00279-05 @@ -2188,23 +2091,6 @@ C3L-00279.WXS.N C3L-00279 LUAD WXS blood_normal CPT0081730001 CPT0081730001.Whol C3L-00279.WXS.N.hg38 C3L-00279 LUAD WXS blood_normal CPT0081730001 65e20a75-5878-465c-b516-43c5169cd45a_gdc_realn.bam 33803250245 BAM NA 35dc37bc-38cf-4431-a8da-347eb39ce8df 2ee08eb494dc27cdb58bb577118603b0 hg38 Blood Derived Normal C3L-00279-31 C3L-00279.WXS.T C3L-00279 LUAD WXS tumor CPT0082740010 CPT0082740010.WholeExome.RP-1303.bam 37022818850 BAM NA 2a48e41f-9b72-4b17-b59e-6c5b6faa5b10 7105919ed8e804c190de5d7eef4cd975 hg19 Primary Tumor C3L-00279-02,C3L-00279-03 C3L-00279.WXS.T.hg38 C3L-00279 LUAD WXS tumor CPT0082740010 d974bcf0-cacc-4d3c-9ad7-c3851c1e2cb1_gdc_realn.bam 52184801332 BAM NA c83272c0-2512-416f-8d44-3b280bd3e8b8 bed6bd356718c9bf3b9e14e46ba79d96 hg38 Primary Tumor C3L-00279-02,C3L-00279-03 -C3L-00349.MethArray.Green.T C3L-00349 GBM Methylation Array tumor CPT0000490007 202184900128_R07C01_Grn.idat 13676246 IDAT Green df239e8b-0f2c-4a52-b68d-0eb67f9d7b60 f9f8af39ac3ed89dfe5c048c68d842ec NA Primary Tumor C3L-00349-02 -C3L-00349.MethArray.Red.T C3L-00349 GBM Methylation Array tumor CPT0000490007 202184900128_R07C01_Red.idat 13676246 IDAT Red 91d1aa67-5e2a-42b5-8aab-baa8cfab493f 67659026d020c41b74940ee3de64b858 NA Primary Tumor C3L-00349-02 -C3L-00349.miRNA-Seq.T C3L-00349 GBM miRNA-Seq tumor CPT0000490005 181113_UNC31-K00269_0164_AH23NNBBXY_CTATAC_S15_L001_R1_001.unaln.bam 253757619 BAM NA c301ca06-334d-418d-9fa5-2e870de7a449 ddb6fc0148a502939e54ce67910c03a9 NA Primary Tumor C3L-00349-02 -C3L-00349.miRNA-Seq.T.hg38 C3L-00349 GBM miRNA-Seq tumor CPT0000490005 24cd1e35-88a1-44e5-89ce-62a99e8e775e_mirnaseq_gdc_realn.bam 278459513 BAM NA cb875f66-89d2-48fd-9a3a-c9d98684952c e63314959f5bd04184c3062283591d3b hg38 Primary Tumor C3L-00349-02 -C3L-00349.RNA-Seq.chimeric.T.hg38 C3L-00349 GBM RNA-Seq tumor CPT0000490005 74f970c0-fe45-4596-9dcb-cbb12220a5d4.rna_seq.chimeric.gdc_realn.bam 68567006 BAM chimeric 7a6eaf7c-d9fd-4082-b6a0-3e76dd70a7e7 db91fd7ae15ab7a9c41032d400161118 hg38 Primary Tumor C3L-00349-02 -C3L-00349.RNA-Seq.genomic.T.hg38 C3L-00349 GBM RNA-Seq tumor CPT0000490005 74f970c0-fe45-4596-9dcb-cbb12220a5d4.rna_seq.genomic.gdc_realn.bam 8749396957 BAM genomic f041a2a3-6c40-498c-8113-ed2e4534cbef ef0acf33acc153fd8452932736ee1bbb hg38 Primary Tumor C3L-00349-02 -C3L-00349.RNA-Seq.R1.T C3L-00349 GBM RNA-Seq tumor CPT0000490005 170823_UNC31-K00269_0075_AHLCW5BBXX_GTGGCC_S4_L005_R1_001.fastq.gz 4085911014 FASTQ NA 511be7f0-f8ca-4a44-adef-caae528c002f 5a47974de771ea5e7c5572ec54bb902a NA Primary Tumor C3L-00349-02 -C3L-00349.RNA-Seq.R2.T C3L-00349 GBM RNA-Seq tumor CPT0000490005 170823_UNC31-K00269_0075_AHLCW5BBXX_GTGGCC_S4_L005_R2_001.fastq.gz 4385424889 FASTQ NA 68b7a3ef-5a6b-4272-ae90-aa9b8dd30f42 3afe0074e1e6f54846a2c2a11df9748c NA Primary Tumor C3L-00349-02 -C3L-00349.RNA-Seq.transcriptome.T.hg38 C3L-00349 GBM RNA-Seq tumor CPT0000490005 74f970c0-fe45-4596-9dcb-cbb12220a5d4.rna_seq.transcriptome.gdc_realn.bam 12231566487 BAM transcriptome 8fd6386f-5197-44c4-bf3c-ddfa6ca088e3 c5b2f0e64dee3a9a94d48ebc67646593 hg38 Primary Tumor C3L-00349-02 -C3L-00349.WGS.N C3L-00349 GBM WGS blood_normal CPT0000620002 CPT0000620002.WholeGenome.RP-1303.bam 58247756770 BAM NA f379500b-0b1d-44c3-9e9c-ed79ebb99117 9a6528cbd42e219bf268709704ab4ee7 hg19 Blood Derived Normal C3L-00349-31 -C3L-00349.WGS.N.hg38 C3L-00349 GBM WGS blood_normal CPT0000620002 5996a9d5-3f37-40fd-8c62-32549e1189fb_gdc_realn.bam 88572225867 BAM NA 4b66d491-66d9-463b-8def-7f9ce1152199 b2bf92695072cc0762969a89290a00dd hg38 Blood Derived Normal C3L-00349-31 -C3L-00349.WGS.T C3L-00349 GBM WGS tumor CPT0000490007 CPT0000490007.WholeGenome.RP-1303.bam 79082672786 BAM NA 9a06dc6c-cb5f-461f-a1f4-cabddac38cd4 772c07573dbb4a9feca3d9d179046533 hg19 Primary Tumor C3L-00349-02 -C3L-00349.WGS.T.hg38 C3L-00349 GBM WGS tumor CPT0000490007 4f397f83-cb82-420f-b319-12a156ff2d7f_gdc_realn.bam 114912966389 BAM NA 1452eba8-9c52-4a1a-9a2a-4ba70d24ef47 44f6e5c054293d40d76744949483fd73 hg38 Primary Tumor C3L-00349-02 -C3L-00349.WXS.N C3L-00349 GBM WXS blood_normal CPT0000620002 CPT0000620002.WholeExome.RP-1303.bam 36284647700 BAM NA d286e238-a54e-4214-aac5-02363e016df4 8fc23c0b321f7a37071fb3c77014d271 hg19 Blood Derived Normal C3L-00349-31 -C3L-00349.WXS.N.hg38 C3L-00349 GBM WXS blood_normal CPT0000620002 5996a9d5-3f37-40fd-8c62-32549e1189fb_gdc_realn.bam 50255174677 BAM NA da029db4-65a1-4722-bb50-c4894a7d1556 98ee39e86b3066c3a2ef053a9d979ea8 hg38 Blood Derived Normal C3L-00349-31 -C3L-00349.WXS.T C3L-00349 GBM WXS tumor CPT0000490007 CPT0000490007.WholeExome.RP-1303.bam 27355988939 BAM NA bcbbe5cd-e6e7-4b23-9c4c-90ba7c10c891 11b7f2f5b99f44690ae9721a71b6333b hg19 Primary Tumor C3L-00349-02 -C3L-00349.WXS.T.hg38 C3L-00349 GBM WXS tumor CPT0000490007 4f397f83-cb82-420f-b319-12a156ff2d7f_gdc_realn.bam 37527877656 BAM NA 13c76db2-38ae-4382-a84f-c05912f0513e dc4c633aebba3588dbfbadc8322b0334 hg38 Primary Tumor C3L-00349-02 C3L-00356.MethArray.Green.T C3L-00356 UCEC Methylation Array tumor CPT0002130009 202178770100_R01C01_Grn.idat 13676231 IDAT Green 01f9e9ac-db9c-4837-90ba-75355af366a7 f2afb3a50b1b8ef9fe91e7110e61ddc7 NA Primary Tumor C3L-00356-01 C3L-00356.MethArray.Red.T C3L-00356 UCEC Methylation Array tumor CPT0002130009 202178770100_R01C01_Red.idat 13676231 IDAT Red 4837df20-40a4-4d73-8c5c-2a14cd71cb0a d304a18a6fe94182844258a201119f83 NA Primary Tumor C3L-00356-01 C3L-00356.miRNA-Seq.T.ARNA_oWRvA C3L-00356 UCEC miRNA-Seq tumor CPT0002130006 181012_UNC32-K00270_0124_AH223CBBXY_CCAACA_S9_L005_R1_001.unaln.bam 264043402 BAM NA fad45b6a-e837-4a4c-b65b-c65f366664bd 45b4263029dcfe885305ddcc6d3b33a0 NA Primary Tumor C3L-00356-01 sample_tag=ARNA_oWRvA Duplicate item: Additional RNA requested @@ -2253,6 +2139,8 @@ C3L-00359.RNA-Seq.genomic.T.hg38 C3L-00359 CCRCC RNA-Seq tumor CPT0002270005 7cb C3L-00359.RNA-Seq.R1.T C3L-00359 CCRCC RNA-Seq tumor CPT0002270005 170818_UNC32-K00270_0050_AHL2FHBBXX_CGTACG_S1_L001_R1_001.fastq.gz 4039086396 FASTQ NA c073cb50-b34c-44c9-9cd8-8f208cead367 6c29c74f79ce54494d283377e1397496 NA Primary Tumor C3L-00359-01 C3L-00359.RNA-Seq.R2.T C3L-00359 CCRCC RNA-Seq tumor CPT0002270005 170818_UNC32-K00270_0050_AHL2FHBBXX_CGTACG_S1_L001_R2_001.fastq.gz 4454016060 FASTQ NA 031a45c7-e9b4-40e1-b98c-b8beed82aceb cd054cad63ab3c3e232d253d89d8a078 NA Primary Tumor C3L-00359-01 C3L-00359.RNA-Seq.transcriptome.T.hg38 C3L-00359 CCRCC RNA-Seq tumor CPT0002270005 7cb20089-aa6f-43ba-99d9-17b2a06382b9.rna_seq.transcriptome.gdc_realn.bam 11666861023 BAM transcriptome 4647ae5d-25a5-48e5-8f15-0c3d444a6386 8c9ba466d86dd1f968d95059f5f8b70a hg38 Primary Tumor C3L-00359-01 +C3L-00359.scRNA-Seq.R1.T C3L-00359 CCRCC scRNA-Seq tumor CPT0002270014 20220127_WUSTL_TWFU-CPT0002270014-Y1N1Z1_1Bn1_1_GCGGGTAAGT+TAGCACTAAG_S2_L002_R1_001.fastq.gz 7547280130 FASTQ NA d45a535b-43f6-464b-a147-822226dffe47 86f3f2c6ea254f8fc2ea6ae0da4dcc7e NA Primary Tumor C3L-00359-01 +C3L-00359.scRNA-Seq.R2.T C3L-00359 CCRCC scRNA-Seq tumor CPT0002270014 20220127_WUSTL_TWFU-CPT0002270014-Y1N1Z1_1Bn1_1_GCGGGTAAGT+TAGCACTAAG_S2_L002_R2_001.fastq.gz 26570671557 FASTQ NA f1ac3437-676f-4f1f-9131-2f5c385d4688 ab0617133de2356ec8f3be1da955c50d NA Primary Tumor C3L-00359-01 C3L-00359.WGS.N C3L-00359 CCRCC WGS blood_normal CPT0004370002 CPT0004370002.WholeGenome.RP-1303.bam 57925172115 BAM NA e04ccac1-20a8-4b59-9734-8faa65a50ec4 8499ddb19b7b7bed443def520446675f hg19 Blood Derived Normal C3L-00359-31 C3L-00359.WGS.N.hg38 C3L-00359 CCRCC WGS blood_normal CPT0004370002 20ce17ce-fd19-4ec9-b64a-e95dd78aa155_gdc_realn.bam 84679395846 BAM NA 933fff32-75ec-45f1-a2d4-8ac2a99fdd60 2dcf143dc2534b72d14f4a88253f42d1 hg38 Blood Derived Normal C3L-00359-31 C3L-00359.WGS.T C3L-00359 CCRCC WGS tumor CPT0002270008 CPT0002270008.WholeGenome.RP-1303.bam 65220878541 BAM NA d234fee4-2d8e-4948-938e-b67922f1a814 d8900b6aec9d439e3d38b28447d2f701 hg19 Primary Tumor C3L-00359-01 @@ -2696,40 +2584,6 @@ C3L-00422.WXS.N C3L-00422 LUAD WXS blood_normal CPT0081740002 CPT0081740002.Whol C3L-00422.WXS.N.hg38 C3L-00422 LUAD WXS blood_normal CPT0081740002 37d21656-4deb-40ff-9aee-4f619a70bb4b_gdc_realn.bam 34558769145 BAM NA 79be3375-4849-4bb2-ac6e-f30cba74c8c2 c1d1d45351fb8d28f5d4cd098cd037ee hg38 Blood Derived Normal C3L-00422-31 C3L-00422.WXS.T C3L-00422 LUAD WXS tumor CPT0082850010 CPT0082850010.WholeExome.RP-1303.bam 25543519280 BAM NA 62080a81-fdcd-4f02-9bf7-b58574406d09 6a1397f074bcb68b64a109a65be18478 hg19 Primary Tumor C3L-00422-01,C3L-00422-02 C3L-00422.WXS.T.hg38 C3L-00422 LUAD WXS tumor CPT0082850010 d2779a54-6282-4c22-a689-d752fbdc3b21_gdc_realn.bam 34835997820 BAM NA 191ab7f2-92dc-450a-8860-7510e5210f53 2db57b5fdd009e6e1687cd83dba3c201 hg38 Primary Tumor C3L-00422-01,C3L-00422-02 -C3L-00424.MethArray.Green.T C3L-00424 GBM Methylation Array tumor CPT0011630007 202163550115_R05C01_Grn.idat 13676230 IDAT Green 2282ec3a-6cc1-46c1-b582-3f4e703306ea 23fbc9d41ef7d2d015cd6cc124bebf14 NA Primary Tumor C3L-00424-02,C3L-00424-03 -C3L-00424.MethArray.Red.T C3L-00424 GBM Methylation Array tumor CPT0011630007 202163550115_R05C01_Red.idat 13676230 IDAT Red 08dbc76b-d208-4987-8b2d-3a63f58d8005 80024e117924bb98108152d001163273 NA Primary Tumor C3L-00424-02,C3L-00424-03 -C3L-00424.miRNA-Seq.T C3L-00424 GBM miRNA-Seq tumor CPT0011630010 181012_UNC32-K00270_0124_AH223CBBXY_CGTACG_S42_L005_R1_001.unaln.bam 193222319 BAM NA c454fe71-cc63-4e8d-8aad-3a944a7a48a3 ae41927f54d4a132599933d4c939a29e NA Primary Tumor C3L-00424-02,C3L-00424-03 -C3L-00424.miRNA-Seq.T.hg38 C3L-00424 GBM miRNA-Seq tumor CPT0011630010 9c541b07-3b67-4dae-b53f-f93ce9d9b291_mirnaseq_gdc_realn.bam 212874119 BAM NA a824ca32-83ab-4c7e-bc6c-657dfb3d5b37 1c03eed78d61f4ef67e927c36a3e42c3 hg38 Primary Tumor C3L-00424-02,C3L-00424-03 -C3L-00424.RNA-Seq.chimeric.T.hg38 C3L-00424 GBM RNA-Seq tumor CPT0011630010 8a3c6edc-7b93-44fa-a3bb-6fac1aa3510a.rna_seq.chimeric.gdc_realn.bam 90362092 BAM chimeric b11bc027-5cda-475b-9c82-cd03ff76a362 b21778ae2aec830ae747bc376fa7d38e hg38 Primary Tumor C3L-00424-02,C3L-00424-03 -C3L-00424.RNA-Seq.genomic.T.hg38 C3L-00424 GBM RNA-Seq tumor CPT0011630010 8a3c6edc-7b93-44fa-a3bb-6fac1aa3510a.rna_seq.genomic.gdc_realn.bam 6781046126 BAM genomic 4911995d-399c-4910-bcec-06b989111717 d03dfb0a1d313f68ad3a64a7edc42822 hg38 Primary Tumor C3L-00424-02,C3L-00424-03 -C3L-00424.RNA-Seq.R1.T C3L-00424 GBM RNA-Seq tumor CPT0011630010 170818_UNC32-K00270_0051_BHLCCHBBXX_CGTACG_S22_L007_R1_001.fastq.gz 3270540906 FASTQ NA cab0cc6e-c6f3-469a-8753-fe98accd0ac0 e911536c83e485f4c271ef9eae85af02 NA Primary Tumor C3L-00424-02,C3L-00424-03 -C3L-00424.RNA-Seq.R2.T C3L-00424 GBM RNA-Seq tumor CPT0011630010 170818_UNC32-K00270_0051_BHLCCHBBXX_CGTACG_S22_L007_R2_001.fastq.gz 3504235058 FASTQ NA b7457e33-86b2-4f72-b0b0-2bc2740d92a7 102348196716bed1b04cf83ce63878e0 NA Primary Tumor C3L-00424-02,C3L-00424-03 -C3L-00424.RNA-Seq.transcriptome.T.hg38 C3L-00424 GBM RNA-Seq tumor CPT0011630010 8a3c6edc-7b93-44fa-a3bb-6fac1aa3510a.rna_seq.transcriptome.gdc_realn.bam 7716201428 BAM transcriptome 9ce3ea86-f643-47a1-a6bd-abaa628b0615 63a93535a0a411980ad75225eca542ce hg38 Primary Tumor C3L-00424-02,C3L-00424-03 -C3L-00424.WGS.N C3L-00424 GBM WGS blood_normal CPT0012470002 CPT0012470002.WholeGenome.RP-1303.bam 72731613088 BAM NA 0e71c6fc-f9ba-4cd0-af5b-6c0b804af71c c5605b0ed5147b94491098b48301e70d hg19 Blood Derived Normal C3L-00424-31 -C3L-00424.WGS.N.hg38 C3L-00424 GBM WGS blood_normal CPT0012470002 ab02af11-b8e9-479f-9bf0-1a422709018b_gdc_realn.bam 108115628265 BAM NA 6c0a76f1-62b3-4989-b052-d7c1b998d3b5 eb8b428b2c6e8c373ad33b405c50bbb4 hg38 Blood Derived Normal C3L-00424-31 -C3L-00424.WGS.T C3L-00424 GBM WGS tumor CPT0011630007 CPT0011630007.WholeGenome.RP-1303.bam 65646379929 BAM NA 385ec886-88fb-4e70-8a87-d0ab926137cd 030c4e985b8010689e55a43c78d6c7c9 hg19 Primary Tumor C3L-00424-02,C3L-00424-03 -C3L-00424.WGS.T.hg38 C3L-00424 GBM WGS tumor CPT0011630007 ac5da2f4-2c43-4872-a123-a3fc556a98d4_gdc_realn.bam 96583401222 BAM NA e0901ba1-f57c-48c6-9c0b-93c0bcb66e51 d6527c0522bfbc43076920b700d393f3 hg38 Primary Tumor C3L-00424-02,C3L-00424-03 -C3L-00424.WXS.N C3L-00424 GBM WXS blood_normal CPT0012470002 CPT0012470002.WholeExome.RP-1303.bam 32991379793 BAM NA 0b2c582e-3845-48b0-8c08-d20aee56a917 a4a305d66a3fc7b2e3a72fdc7cbd33af hg19 Blood Derived Normal C3L-00424-31 -C3L-00424.WXS.N.hg38 C3L-00424 GBM WXS blood_normal CPT0012470002 ab02af11-b8e9-479f-9bf0-1a422709018b_gdc_realn.bam 45161212295 BAM NA ce0c6622-11f7-4289-8969-9d58f551af19 a831eae4ca4d4d75415e11654e0b802c hg38 Blood Derived Normal C3L-00424-31 -C3L-00424.WXS.T C3L-00424 GBM WXS tumor CPT0011630007 CPT0011630007.WholeExome.RP-1303.bam 22706381623 BAM NA c310c820-55bd-4046-b6a0-4015a1e7a3af 069fe6185c7cb7501e856aa7e221b120 hg19 Primary Tumor C3L-00424-02,C3L-00424-03 -C3L-00424.WXS.T.hg38 C3L-00424 GBM WXS tumor CPT0011630007 ac5da2f4-2c43-4872-a123-a3fc556a98d4_gdc_realn.bam 31134832285 BAM NA 45bd8627-0d42-4cb4-ade9-0cc0b3079266 db88caa81dcac5768925bc120680842b hg38 Primary Tumor C3L-00424-02,C3L-00424-03 -C3L-00429.MethArray.Green.T C3L-00429 GBM Methylation Array tumor CPT0011840007 202184990013_R05C01_Grn.idat 13676226 IDAT Green 3c7425fb-3d24-4c98-8944-6a4d73bd2473 1af158128d4e34150fc8dc7dc79e55e5 NA Primary Tumor C3L-00429-01,C3L-00429-03 -C3L-00429.MethArray.Red.T C3L-00429 GBM Methylation Array tumor CPT0011840007 202184990013_R05C01_Red.idat 13676226 IDAT Red 2ed6597f-fa92-4b03-aafc-a3bf786ef73a a814308fb37aea1f67daa26d99e607fb NA Primary Tumor C3L-00429-01,C3L-00429-03 -C3L-00429.miRNA-Seq.T C3L-00429 GBM miRNA-Seq tumor CPT0011840014 180924_UNC31-K00269_0154_AHWTMLBBXX_CAGGCG_S38_L002_R1_001.unaln.bam 261701263 BAM NA ad0fa403-d918-4641-bc0b-75433cfe2c96 02355d2c1b8bb85858dd76e6f9b316b4 NA Primary Tumor C3L-00429-01,C3L-00429-03 -C3L-00429.miRNA-Seq.T.hg38 C3L-00429 GBM miRNA-Seq tumor CPT0011840014 221377b4-e095-47ec-a4a2-2ee5bb1c8124_mirnaseq_gdc_realn.bam 294727531 BAM NA c7f09159-f5de-47d6-b21b-857391e8e4db dd3c14ee0509c901ef2a34c579942d82 hg38 Primary Tumor C3L-00429-01,C3L-00429-03 -C3L-00429.RNA-Seq.chimeric.T.hg38 C3L-00429 GBM RNA-Seq tumor CPT0011840014 3c1c535e-3046-4595-ac8b-370435eab9eb.rna_seq.chimeric.gdc_realn.bam 113932743 BAM chimeric a43ab35e-375b-4bc5-9ab4-4e88a1e3e1e9 f7fd58a2c137714f5cd1dfdcf2c4ca09 hg38 Primary Tumor C3L-00429-01,C3L-00429-03 -C3L-00429.RNA-Seq.genomic.T.hg38 C3L-00429 GBM RNA-Seq tumor CPT0011840014 3c1c535e-3046-4595-ac8b-370435eab9eb.rna_seq.genomic.gdc_realn.bam 7412791587 BAM genomic 42135463-ca15-472a-bcc9-ce998e2cc38b af18036efe252bdfd364266fc6f26e66 hg38 Primary Tumor C3L-00429-01,C3L-00429-03 -C3L-00429.RNA-Seq.R1.T C3L-00429 GBM RNA-Seq tumor CPT0011840014 170912_UNC31-K00269_0081_AHL3YKBBXX_ACTTGA_S14_L007_R1_001.fastq.gz 3781352130 FASTQ NA c8aea007-296c-4c5f-9a05-f37a17f71fb7 a55b7a3f6845283bdcb9d794e63f998e NA Primary Tumor C3L-00429-01,C3L-00429-03 -C3L-00429.RNA-Seq.R2.T C3L-00429 GBM RNA-Seq tumor CPT0011840014 170912_UNC31-K00269_0081_AHL3YKBBXX_ACTTGA_S14_L007_R2_001.fastq.gz 4057092623 FASTQ NA 174b78e2-8f90-4bd3-b3e6-33e1ac6c973f 133333741cae1077d3f3d3b89fb00ce6 NA Primary Tumor C3L-00429-01,C3L-00429-03 -C3L-00429.RNA-Seq.transcriptome.T.hg38 C3L-00429 GBM RNA-Seq tumor CPT0011840014 3c1c535e-3046-4595-ac8b-370435eab9eb.rna_seq.transcriptome.gdc_realn.bam 7735620846 BAM transcriptome ed7a2788-7a06-4a34-b916-de005aad27c3 7326e3c57b1577cf1f2fe0706be3be27 hg38 Primary Tumor C3L-00429-01,C3L-00429-03 -C3L-00429.WGS.N C3L-00429 GBM WGS blood_normal CPT0012480002 CPT0012480002.WholeGenome.RP-1303.bam 72583138461 BAM NA 2cf6e7bd-dd2f-4e7c-8c48-93c80e794157 cb08b85f3b6eb3e4b0be40e84513e955 hg19 Blood Derived Normal C3L-00429-32 -C3L-00429.WGS.N.hg38 C3L-00429 GBM WGS blood_normal CPT0012480002 c4fd9692-30a3-4f34-a8ae-8f320c4a0050_gdc_realn.bam 108275397437 BAM NA 88056b8b-09dd-4be2-871b-1c23ea05c0cf 370169ae66e0a9f9c327eeb7a2094ff6 hg38 Blood Derived Normal C3L-00429-32 -C3L-00429.WGS.T C3L-00429 GBM WGS tumor CPT0011840007 CPT0011840007.WholeGenome.RP-1303.bam 61842546792 BAM NA 68b9136d-9776-4b1d-b340-794cd672b087 4c8b9db9c439dac1660fd86dc8c08a7b hg19 Primary Tumor C3L-00429-01,C3L-00429-03 -C3L-00429.WGS.T.hg38 C3L-00429 GBM WGS tumor CPT0011840007 9cc4c755-ca18-481a-b9ef-25ebd4706838_gdc_realn.bam 91616344611 BAM NA a9ebdfe6-8bdd-4469-be27-c8999c000e8f 9f924a81a82476a78119d812ef312e59 hg38 Primary Tumor C3L-00429-01,C3L-00429-03 -C3L-00429.WXS.N C3L-00429 GBM WXS blood_normal CPT0012480002 CPT0012480002.WholeExome.RP-1303.bam 58069383422 BAM NA 848ae22a-856d-49dd-86c5-888a730e3d84 91867a7991bdb42db3ee1ec8edf573c2 hg19 Blood Derived Normal C3L-00429-32 -C3L-00429.WXS.N.hg38 C3L-00429 GBM WXS blood_normal CPT0012480002 c4fd9692-30a3-4f34-a8ae-8f320c4a0050_gdc_realn.bam 79498403668 BAM NA 29df10c7-ed12-4b30-87bd-cafa5216e72d cd4df82d0bebe851b69d0252aef26753 hg38 Blood Derived Normal C3L-00429-32 -C3L-00429.WXS.T C3L-00429 GBM WXS tumor CPT0011840007 CPT0011840007.WholeExome.RP-1303.bam 24273957907 BAM NA 323d957a-dfe4-4f70-bff3-154841aeb242 e6abdebb530c4583cdc527a96a56a18f hg19 Primary Tumor C3L-00429-01,C3L-00429-03 -C3L-00429.WXS.T.hg38 C3L-00429 GBM WXS tumor CPT0011840007 9cc4c755-ca18-481a-b9ef-25ebd4706838_gdc_realn.bam 33600007534 BAM NA 89fa5735-037e-4e4f-9090-d981b401fc1a 7b51ba005cfcf0d279fd2124ebd06837 hg38 Primary Tumor C3L-00429-01,C3L-00429-03 C3L-00444.MethArray.Green.A C3L-00444 LUAD Methylation Array tissue_normal CPT0130570006 203219650202_R04C01_Grn.idat 13676216 IDAT Green c382b116-03f4-492c-ab44-96dbb8a83903 5f8f892ccceeaf01513010b1221ebf1e NA Solid Tissue Normal C3L-00444-03 C3L-00444.MethArray.Green.T C3L-00444 LUAD Methylation Array tumor CPT0130600006 203219640172_R04C01_Grn.idat 13676221 IDAT Green ad4f9d96-a87c-4da2-bd1f-203cfaa4885e be1475635d47db2aeae0b95077fdf526 NA Primary Tumor C3L-00444-08 C3L-00444.MethArray.Red.A C3L-00444 LUAD Methylation Array tissue_normal CPT0130570006 203219650202_R04C01_Red.idat 13676216 IDAT Red db816a66-4d33-4bf4-9a91-8a4af36bd199 f0768ce2a3f5a27e1d20bcea6422663d NA Solid Tissue Normal C3L-00444-03 @@ -2821,13 +2675,13 @@ C3L-00446.WXS.N.hg38 C3L-00446 LUAD WXS blood_normal CPT0129890002 99f55744-433e C3L-00446.WXS.T C3L-00446 LUAD WXS tumor CPT0129030006 CPT0129030006.WholeExome.RP-1303.bam 27949123385 BAM NA 7cca201c-ce6d-4dc5-8da8-64fe394a3ba2 702d455475995e0a83fb581ea25c3dfa hg19 Primary Tumor C3L-00446-01 C3L-00446.WXS.T.hg38 C3L-00446 LUAD WXS tumor CPT0129030006 8817b640-f385-4838-a90d-56e2deed4b68_wxs_gdc_realn.bam 38601455048 BAM NA 19ea98c8-3932-4c17-9fe9-c2db50c1b277 ecd35252812d7968fe62b65a910aaef8 hg38 Primary Tumor C3L-00446-01 C3L-00447.MethArray.Green.A C3L-00447 CCRCC Methylation Array tissue_normal CPT0006950014 204930630084_R07C01_Grn.idat 13677885 IDAT Green be349024-ec31-4e8c-bf5e-1207e8b254ea d16de51045a5a83cd1d3d1c8866f772c NA Solid Tissue Normal C3L-00447-06 -C3L-00447.MethArray.Green.T C3L-00447 CCRCC Methylation Array tumor CPT0006900009 202163550072_R02C01_Grn.idat 13676236 IDAT Green 90dcff0b-8ea6-48cc-aa80-468c8d008295 308280c02bf7993326e61bafc9eae6f2 NA Primary Tumor C3L-00447-02 C3L-00447.MethArray.Green.T.HET_rkL2E4 C3L-00447 CCRCC Methylation Array tumor CPT0006910009 204367490082_R01C01_Grn.idat 13677900 IDAT Green a0b2c3d0-ec99-445c-a66f-8423a4ffd0b5 cc000eca2a14d0b0b7f7536fdd255856 NA Primary Tumor C3L-00447-03 sample_tag=HET_rkL2E4 Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-00447.MethArray.Green.T.HET_rkzopB C3L-00447 CCRCC Methylation Array tumor CPT0006860009 204367490151_R04C01_Grn.idat 13677895 IDAT Green 76e867b5-95e0-4f06-bca4-a0822ba07174 cf7b6a2ce7f5ff10a88360ab3c1c3e54 NA Primary Tumor C3L-00447-01 sample_tag=HET_rkzopB Duplicate item: CCRCC Tumor heterogeneity study aliquot +C3L-00447.MethArray.Green.T.UNK_rkLZ0p C3L-00447 CCRCC Methylation Array tumor CPT0006900009 202163550072_R02C01_Grn.idat 13676236 IDAT Green 90dcff0b-8ea6-48cc-aa80-468c8d008295 308280c02bf7993326e61bafc9eae6f2 NA Primary Tumor C3L-00447-02 sample_tag=UNK_rkLZ0p The WGS data for this aliquot failed the GDC harmonization pipeline. C3L-00447.MethArray.Red.A C3L-00447 CCRCC Methylation Array tissue_normal CPT0006950014 204930630084_R07C01_Red.idat 13677885 IDAT Red 7a73a8fc-bbe7-40b1-bec2-a83a7fd0dba6 4ec0875163e51eb9ff7fddde94f9e388 NA Solid Tissue Normal C3L-00447-06 -C3L-00447.MethArray.Red.T C3L-00447 CCRCC Methylation Array tumor CPT0006900009 202163550072_R02C01_Red.idat 13676236 IDAT Red 662536f1-4b03-4d05-99ed-76413c86db69 64cdbd550bf1b895fe5416d6f0fa1eaa NA Primary Tumor C3L-00447-02 C3L-00447.MethArray.Red.T.HET_rkL2E4 C3L-00447 CCRCC Methylation Array tumor CPT0006910009 204367490082_R01C01_Red.idat 13677900 IDAT Red 7fa1fdda-b818-4891-8ca1-71d28278bd2e 176c319dbca909c9474598976f35a6a1 NA Primary Tumor C3L-00447-03 sample_tag=HET_rkL2E4 Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-00447.MethArray.Red.T.HET_rkzopB C3L-00447 CCRCC Methylation Array tumor CPT0006860009 204367490151_R04C01_Red.idat 13677895 IDAT Red bcc90441-619b-452f-8e88-ee119dc5b378 080ebfbd7a647f0df5d67366635d2a2d NA Primary Tumor C3L-00447-01 sample_tag=HET_rkzopB Duplicate item: CCRCC Tumor heterogeneity study aliquot +C3L-00447.MethArray.Red.T.UNK_rkLZ0p C3L-00447 CCRCC Methylation Array tumor CPT0006900009 202163550072_R02C01_Red.idat 13676236 IDAT Red 662536f1-4b03-4d05-99ed-76413c86db69 64cdbd550bf1b895fe5416d6f0fa1eaa NA Primary Tumor C3L-00447-02 sample_tag=UNK_rkLZ0p The WGS data for this aliquot failed the GDC harmonization pipeline. C3L-00447.miRNA-Seq.A C3L-00447 CCRCC miRNA-Seq tissue_normal CPT0006950006 181108_UNC31-K00269_0163_BH23TVBBXY_CTATAC_S39_L004_R1_001.unaln.bam 184484485 BAM NA 0e5e857a-40cf-4e10-a339-14007a0ea64e 439e340029f2e7ef32e96c90323647db NA Solid Tissue Normal C3L-00447-06 C3L-00447.miRNA-Seq.A.hg38 C3L-00447 CCRCC miRNA-Seq tissue_normal CPT0006950006 59e90c96-de91-44b2-b044-984edc20044e_mirnaseq_gdc_realn.bam 206332528 BAM NA add8dcbf-d451-4788-915f-5e468b203a97 1441fd50f3b063a6265c623d45759466 hg38 Solid Tissue Normal C3L-00447-06 C3L-00447.miRNA-Seq.T C3L-00447 CCRCC miRNA-Seq tumor CPT0006900006 181012_UNC32-K00270_0124_AH223CBBXY_GACGAC_S14_L005_R1_001.unaln.bam 198207328 BAM NA f4bee798-04aa-4916-a12b-3baff5c84f62 9efa6ab1688c9413ff6bdc12a28d94f4 NA Primary Tumor C3L-00447-02 @@ -2860,22 +2714,22 @@ C3L-00447.WGS.A C3L-00447 CCRCC WGS tissue_normal CPT0006950009 CPT0006950009.Wh C3L-00447.WGS.A.hg38 C3L-00447 CCRCC WGS tissue_normal CPT0006950009 675b1ebb-93a6-4a42-ba1f-aae866df5e02_wgs_gdc_realn.bam 88502185607 BAM NA bc9ee663-4493-40b7-96c5-ebf358ce0d24 6d92c757a8270b46eac112e4bbfdc733 hg38 Solid Tissue Normal C3L-00447-06 C3L-00447.WGS.N C3L-00447 CCRCC WGS blood_normal CPT0002760002 CPT0002760002.WholeGenome.RP-1303.bam 68003274140 BAM NA cd01374b-f105-4efc-aec2-2babfede450d c22f9c4990b36d59af98bab9818236d1 hg19 Blood Derived Normal C3L-00447-31 C3L-00447.WGS.N.hg38 C3L-00447 CCRCC WGS blood_normal CPT0002760002 2acf7759-a2bf-47a0-b5e9-f32f6d1dd576_gdc_realn.bam 101050468340 BAM NA d2ec79c3-3ba9-4a98-b238-2a6dee356493 822c5e3b6b6bc9973b5fa55e0a0764bc hg38 Blood Derived Normal C3L-00447-31 -C3L-00447.WGS.T C3L-00447 CCRCC WGS tumor CPT0006900009 CPT0006900009.WholeGenome.RP-1303.bam 64589818148 BAM NA 08889ecf-1144-45f9-a2b2-788eab1878c0 06bd989cb3640479da2046820e88a3dc hg19 Primary Tumor C3L-00447-02 C3L-00447.WGS.T.HET_rkL2E4 C3L-00447 CCRCC WGS tumor CPT0006910009 CPT0006910009.WholeGenome.RP-2158.bam 30525517897 BAM NA ff1095f4-7715-4739-9b27-be289c05e2a4 019b40ca01ece47931ea36e3c25b18f6 hg19 Primary Tumor C3L-00447-03 sample_tag=HET_rkL2E4 Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-00447.WGS.T.HET_rkL2E4.hg38 C3L-00447 CCRCC WGS tumor CPT0006910009 b83ac703-865f-4ab2-bc70-64b2aa2b0dc3_wgs_gdc_realn.bam 91857748028 BAM NA cd3091b7-a8c0-4c4d-af7a-59ca029ed061 a6c040d4f602078628ecba3af90ef3b9 hg38 Primary Tumor C3L-00447-03 sample_tag=HET_rkL2E4 Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-00447.WGS.T.HET_rkzopB C3L-00447 CCRCC WGS tumor CPT0006860009 CPT0006860009.WholeGenome.RP-2158.bam 27008577940 BAM NA 21a01e12-7b34-467c-8381-00b68b22df8c 7a4028450bcd03fb9590639f9173eb82 hg19 Primary Tumor C3L-00447-01 sample_tag=HET_rkzopB Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-00447.WGS.T.HET_rkzopB.hg38 C3L-00447 CCRCC WGS tumor CPT0006860009 8905f8f8-c66d-4893-ad4f-a158b3023f20_wgs_gdc_realn.bam 77143257414 BAM NA 44bb34eb-03ab-461f-96d7-dfd80c5bb507 26502373b87217369574bda182bdc58a hg38 Primary Tumor C3L-00447-01 sample_tag=HET_rkzopB Duplicate item: CCRCC Tumor heterogeneity study aliquot -C3L-00447.WGS.T.hg38 C3L-00447 CCRCC WGS tumor CPT0006900009 51b9c76b-1f15-4493-9047-0d661fe133b6_gdc_realn.bam 94012938866 BAM NA 8f2765e2-9bb1-4389-9c21-4b2603e7d778 d671af92d4d28b7bfa2b96c08ca7a329 hg38 Primary Tumor C3L-00447-02 +C3L-00447.WGS.T.UNK_rkLZ0p C3L-00447 CCRCC WGS tumor CPT0006900009 CPT0006900009.WholeGenome.RP-1303.bam 64589818148 BAM NA 08889ecf-1144-45f9-a2b2-788eab1878c0 06bd989cb3640479da2046820e88a3dc hg19 Primary Tumor C3L-00447-02 sample_tag=UNK_rkLZ0p The WGS data for this aliquot failed the GDC harmonization pipeline. +C3L-00447.WGS.T.UNK_rkLZ0p.hg38 C3L-00447 CCRCC WGS tumor CPT0006900009 51b9c76b-1f15-4493-9047-0d661fe133b6_gdc_realn.bam 94012938866 BAM NA 8f2765e2-9bb1-4389-9c21-4b2603e7d778 d671af92d4d28b7bfa2b96c08ca7a329 hg38 Primary Tumor C3L-00447-02 sample_tag=UNK_rkLZ0p The WGS data for this aliquot failed the GDC harmonization pipeline. C3L-00447.WXS.A C3L-00447 CCRCC WXS tissue_normal CPT0006950009 CPT0006950009.WholeExome.RP-1303.bam 32516193226 BAM NA f5847097-6ea7-4c1f-8185-9ab16c196a66 9dd1a2ca22badc92e953220e606ac1c0 hg19 Solid Tissue Normal C3L-00447-06 C3L-00447.WXS.A.hg38 C3L-00447 CCRCC WXS tissue_normal CPT0006950009 675b1ebb-93a6-4a42-ba1f-aae866df5e02_wxs_gdc_realn.bam 44243834783 BAM NA a303ecdb-a13a-4903-a1de-929f509971bc 913bd1675792b2047bacb194c7e6ad5c hg38 Solid Tissue Normal C3L-00447-06 C3L-00447.WXS.N C3L-00447 CCRCC WXS blood_normal CPT0002760002 CPT0002760002.WholeExome.RP-1303.bam 22369156445 BAM NA e13596df-ab0a-4528-9479-d471822c71ec 4713f5a633d12899666994c31fcffcb6 hg19 Blood Derived Normal C3L-00447-31 C3L-00447.WXS.N.hg38 C3L-00447 CCRCC WXS blood_normal CPT0002760002 2acf7759-a2bf-47a0-b5e9-f32f6d1dd576_gdc_realn.bam 30882813614 BAM NA 5fcfa123-8827-4519-aefb-b0189ae82dc8 cf9ad0b46f5678903e0c5c56eb827368 hg38 Blood Derived Normal C3L-00447-31 -C3L-00447.WXS.T C3L-00447 CCRCC WXS tumor CPT0006900009 CPT0006900009.WholeExome.RP-1303.bam 22912254096 BAM NA c564ce17-728a-45f0-afde-06061e1aff45 921b4613f831cbe80ee7b6e422571107 hg19 Primary Tumor C3L-00447-02 C3L-00447.WXS.T.HET_rkL2E4 C3L-00447 CCRCC WXS tumor CPT0006910009 CPT0006910009.WholeExome.RP-1303.bam 49548117424 BAM NA edad4172-5c85-4a93-aaff-46201aa1735e c2aaa9d00c14fe64c932937e04b8dde4 hg19 Primary Tumor C3L-00447-03 sample_tag=HET_rkL2E4 Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-00447.WXS.T.HET_rkL2E4.hg38 C3L-00447 CCRCC WXS tumor CPT0006910009 b83ac703-865f-4ab2-bc70-64b2aa2b0dc3_wxs_gdc_realn.bam 68337491521 BAM NA 8aa9a5f4-4769-4f4e-8e32-d7d1f634d01b c84d47c7e5939815b822fc64d561b874 hg38 Primary Tumor C3L-00447-03 sample_tag=HET_rkL2E4 Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-00447.WXS.T.HET_rkzopB C3L-00447 CCRCC WXS tumor CPT0006860009 CPT0006860009.WholeExome.RP-1303.bam 20997947433 BAM NA 83b7c6d0-5703-4399-adc1-75ccebd187df cc1517746f4be8c7a772721c37296d09 hg19 Primary Tumor C3L-00447-01 sample_tag=HET_rkzopB Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-00447.WXS.T.HET_rkzopB.hg38 C3L-00447 CCRCC WXS tumor CPT0006860009 8905f8f8-c66d-4893-ad4f-a158b3023f20_wxs_gdc_realn.bam 28971883153 BAM NA 9d5950fd-fe30-4c96-bbc9-e0bd350a3698 fd16b8d99a6ee0cf6bbca673e26aeee5 hg38 Primary Tumor C3L-00447-01 sample_tag=HET_rkzopB Duplicate item: CCRCC Tumor heterogeneity study aliquot -C3L-00447.WXS.T.hg38 C3L-00447 CCRCC WXS tumor CPT0006900009 51b9c76b-1f15-4493-9047-0d661fe133b6_gdc_realn.bam 31067852101 BAM NA 532f1bc2-2f90-4838-a000-aa75969e323c 099a35bda961bcd2947e0c8ebbe02e26 hg38 Primary Tumor C3L-00447-02 +C3L-00447.WXS.T.UNK_rkLZ0p C3L-00447 CCRCC WXS tumor CPT0006900009 CPT0006900009.WholeExome.RP-1303.bam 22912254096 BAM NA c564ce17-728a-45f0-afde-06061e1aff45 921b4613f831cbe80ee7b6e422571107 hg19 Primary Tumor C3L-00447-02 sample_tag=UNK_rkLZ0p The WGS data for this aliquot failed the GDC harmonization pipeline. +C3L-00447.WXS.T.UNK_rkLZ0p.hg38 C3L-00447 CCRCC WXS tumor CPT0006900009 51b9c76b-1f15-4493-9047-0d661fe133b6_gdc_realn.bam 31067852101 BAM NA 532f1bc2-2f90-4838-a000-aa75969e323c 099a35bda961bcd2947e0c8ebbe02e26 hg38 Primary Tumor C3L-00447-02 sample_tag=UNK_rkLZ0p The WGS data for this aliquot failed the GDC harmonization pipeline. C3L-00448.MethArray.Green.A C3L-00448 CCRCC Methylation Array tissue_normal CPT0010170009 204930640051_R05C01_Grn.idat 13677885 IDAT Green 236cfcd2-d98a-48b6-8671-8038a401f9d0 c8920fc2a446ce461b49fb0ed1e186ae NA Solid Tissue Normal C3L-00448-06 C3L-00448.MethArray.Green.T C3L-00448 CCRCC Methylation Array tumor CPT0010160006 202163550115_R02C01_Grn.idat 13676230 IDAT Green aa70c016-7c19-43bf-a766-58db0fe32bd8 b3ce3c97e2dab9315ebc99dae1c76400 NA Primary Tumor C3L-00448-01 C3L-00448.MethArray.Red.A C3L-00448 CCRCC Methylation Array tissue_normal CPT0010170009 204930640051_R05C01_Red.idat 13677885 IDAT Red 36b43a18-e01f-4290-9e6d-337f6c429788 9e9fc3bede5c5d3b51af15d8db2eb61b NA Solid Tissue Normal C3L-00448-06 @@ -3100,23 +2954,6 @@ C3L-00503.WXS.N C3L-00503 LSCC WXS blood_normal CPT0081750001 CPT0081750001.Whol C3L-00503.WXS.N.hg38 C3L-00503 LSCC WXS blood_normal CPT0081750001 9b1d1a96-4652-4b71-961a-1159746b2e10_gdc_realn.bam 40131980449 BAM NA 24b3b72d-c3cb-4dc9-96d2-3e8cf9230b52 2523576e12494509626d6de040890666 hg38 Blood Derived Normal C3L-00503-31 C3L-00503.WXS.T C3L-00503 LSCC WXS tumor CPT0082970010 CPT0082970010.WholeExome.RP-1303.bam 26560468225 BAM NA 8648429a-cdb2-4366-8ecc-e8f579c3cbcf 1e6dd978629ce83894eafea533c17665 hg19 Primary Tumor C3L-00503-01,C3L-00503-03 C3L-00503.WXS.T.hg38 C3L-00503 LSCC WXS tumor CPT0082970010 e7d164b4-6504-4434-b466-31771b0cb8b6_gdc_realn.bam 36176673257 BAM NA 36693738-4fed-4e19-ad62-16391425c614 75a1f4f6101908766e81c527631b64f3 hg38 Primary Tumor C3L-00503-01,C3L-00503-03 -C3L-00506.MethArray.Green.T C3L-00506 GBM Methylation Array tumor CPT0017560018 202184990069_R06C01_Grn.idat 13676226 IDAT Green 50cb5ad4-c853-4c4d-9873-46d57556ea9e 0fcaf661b7caa404e1be586b9c73f541 NA Primary Tumor C3L-00506-01,C3L-00506-02 -C3L-00506.MethArray.Red.T C3L-00506 GBM Methylation Array tumor CPT0017560018 202184990069_R06C01_Red.idat 13676226 IDAT Red 04b23542-44cf-4a79-98d7-5e5e7e5406ce c145ed8dd9af906ae4c232e783b712cb NA Primary Tumor C3L-00506-01,C3L-00506-02 -C3L-00506.miRNA-Seq.T C3L-00506 GBM miRNA-Seq tumor CPT0017560020 181113_UNC31-K00269_0164_AH23NNBBXY_CATTTT_S11_L003_R1_001.unaln.bam 205712759 BAM NA 0e63b005-6cc2-49f9-aa1c-4c267f10e0a3 365c05638ecdca2220bf77a65858ca30 NA Primary Tumor C3L-00506-01,C3L-00506-02 -C3L-00506.miRNA-Seq.T.hg38 C3L-00506 GBM miRNA-Seq tumor CPT0017560020 2a08f6a5-788d-4861-8305-128cfb21e77f_mirnaseq_gdc_realn.bam 236920582 BAM NA 380782fd-a8eb-4c04-b21f-1dfb6299cf6f a950d28497a0a5c9e2c56e70f794382a hg38 Primary Tumor C3L-00506-01,C3L-00506-02 -C3L-00506.RNA-Seq.chimeric.T.hg38 C3L-00506 GBM RNA-Seq tumor CPT0017560020 40cc7340-94f8-4781-9161-db8b60ebec59.rna_seq.chimeric.gdc_realn.bam 64551714 BAM chimeric eec47748-dd76-4bb7-9a13-e67ed76bc861 6197a00556d3754856f32edacf631203 hg38 Primary Tumor C3L-00506-01,C3L-00506-02 -C3L-00506.RNA-Seq.genomic.T.hg38 C3L-00506 GBM RNA-Seq tumor CPT0017560020 40cc7340-94f8-4781-9161-db8b60ebec59.rna_seq.genomic.gdc_realn.bam 8790012373 BAM genomic 0f3999e9-0ebc-4584-8ed3-5afc775f2819 78df32516dfa79bbd0943de7bddf8a77 hg38 Primary Tumor C3L-00506-01,C3L-00506-02 -C3L-00506.RNA-Seq.R1.T C3L-00506 GBM RNA-Seq tumor CPT0017560020 170823_UNC31-K00269_0076_BHLCTFBBXX_TGACCA_S8_L002_R1_001.fastq.gz 3980671399 FASTQ NA c87ff577-885e-4b58-8ae5-01c87a77337a f7326fc37e9812fe2ee501ab2453ff19 NA Primary Tumor C3L-00506-01,C3L-00506-02 -C3L-00506.RNA-Seq.R2.T C3L-00506 GBM RNA-Seq tumor CPT0017560020 170823_UNC31-K00269_0076_BHLCTFBBXX_TGACCA_S8_L002_R2_001.fastq.gz 4277886224 FASTQ NA 3f3fd006-cee8-494e-ba71-98e6134ffdff 7d93c833a64fddc4a2c03b23f2034e3c NA Primary Tumor C3L-00506-01,C3L-00506-02 -C3L-00506.RNA-Seq.transcriptome.T.hg38 C3L-00506 GBM RNA-Seq tumor CPT0017560020 40cc7340-94f8-4781-9161-db8b60ebec59.rna_seq.transcriptome.gdc_realn.bam 11441265912 BAM transcriptome b614a925-8b1e-4703-b6e5-a46470626e38 a6534da4e66ffdaaabc899d6808673ba hg38 Primary Tumor C3L-00506-01,C3L-00506-02 -C3L-00506.WGS.N C3L-00506 GBM WGS blood_normal CPT0015370002 CPT0015370002.WholeGenome.RP-1303.bam 70587283650 BAM NA 2016b89d-ce79-4c3f-a79e-c2a37ba26f0a f26e4481d9f0998bf66d97318436a302 hg19 Blood Derived Normal C3L-00506-31 -C3L-00506.WGS.N.hg38 C3L-00506 GBM WGS blood_normal CPT0015370002 7caabded-768a-4faf-b164-e646657c0a08_gdc_realn.bam 111357006675 BAM NA eccb55ab-88b8-404d-bd51-a31496496a73 a255d9b9ea9e67e9b3f87992484212ab hg38 Blood Derived Normal C3L-00506-31 -C3L-00506.WGS.T C3L-00506 GBM WGS tumor CPT0017560018 CPT0017560018.WholeGenome.RP-1303.bam 80445712855 BAM NA 9f5fbbda-8782-40c7-902c-1f014e55ac91 8aacf9abaa00152453c9f8e3b16167ca hg19 Primary Tumor C3L-00506-01,C3L-00506-02 -C3L-00506.WGS.T.hg38 C3L-00506 GBM WGS tumor CPT0017560018 3d0b68f7-ef37-4da6-8626-0ffcbed10d02_gdc_realn.bam 121224209825 BAM NA 4b1e84dc-a6a0-435b-b260-b776ea156a72 e6b4146f7d72923e5fc135ef7413c047 hg38 Primary Tumor C3L-00506-01,C3L-00506-02 -C3L-00506.WXS.N C3L-00506 GBM WXS blood_normal CPT0015370002 CPT0015370002.WholeExome.RP-1303.bam 23776662553 BAM NA 3f9af642-dce3-47f5-8d59-bb7e19a27daa 9bb9ceff934e987d9eeac5fac87b48be hg19 Blood Derived Normal C3L-00506-31 -C3L-00506.WXS.N.hg38 C3L-00506 GBM WXS blood_normal CPT0015370002 7caabded-768a-4faf-b164-e646657c0a08_gdc_realn.bam 32397684331 BAM NA a83137eb-0bbe-435b-a04e-fa5eb01d5bf3 1b2b2d69a77739a227f24bf197726f18 hg38 Blood Derived Normal C3L-00506-31 -C3L-00506.WXS.T C3L-00506 GBM WXS tumor CPT0017560018 CPT0017560018.WholeExome.RP-1303.bam 31079432304 BAM NA e2d15974-348b-47ff-b488-bc88580afbd2 c1ea7053a9ebd235972701365ad6d4ac hg19 Primary Tumor C3L-00506-01,C3L-00506-02 -C3L-00506.WXS.T.hg38 C3L-00506 GBM WXS tumor CPT0017560018 3d0b68f7-ef37-4da6-8626-0ffcbed10d02_gdc_realn.bam 42322349762 BAM NA 5b99bd9e-8ff3-4dcc-a417-16c2a540c0d9 b8f399fdd2e6f38918b3619df28a051d hg38 Primary Tumor C3L-00506-01,C3L-00506-02 C3L-00510.MethArray.Green.A C3L-00510 LUAD Methylation Array tissue_normal CPT0011930009 203027390078_R04C01_Grn.idat 13676226 IDAT Green ef0e40f7-131a-4cdf-a2cb-d2a2b838d129 56648d29c3bddc3dfbce4f94fe06ec14 NA Solid Tissue Normal C3L-00510-04 C3L-00510.MethArray.Green.T C3L-00510 LUAD Methylation Array tumor CPT0011910007 202184990008_R02C01_Grn.idat 13676216 IDAT Green 5459d898-9b36-40a4-bf13-70429bc2552b e6c9ff8fc71bfbf33f7daad2485fd443 NA Primary Tumor C3L-00510-02,C3L-00510-03 C3L-00510.MethArray.Red.A C3L-00510 LUAD Methylation Array tissue_normal CPT0011930009 203027390078_R04C01_Red.idat 13676226 IDAT Red 1baceab8-4abe-4dd9-90fe-2e2ac7bec789 e92c3810160b9d4cfc142252a8dc93f7 NA Solid Tissue Normal C3L-00510-04 @@ -3147,23 +2984,6 @@ C3L-00510.WXS.N C3L-00510 LUAD WXS blood_normal CPT0012490002 CPT0012490002.Whol C3L-00510.WXS.N.hg38 C3L-00510 LUAD WXS blood_normal CPT0012490002 7877dbfe-0f47-4f17-8415-bbf4fac43aaa_gdc_realn.bam 44901361910 BAM NA 88a680ac-60b4-473d-8a36-60159a789e3b b6b26c345f0f79e4f5577ee1d4f247f4 hg38 Blood Derived Normal C3L-00510-31 C3L-00510.WXS.T C3L-00510 LUAD WXS tumor CPT0011910007 CPT0011910007.WholeExome.RP-1303.bam 22383880769 BAM NA 6061da9a-f2ca-42e7-92d6-523084944f95 9c9136c8af2e6192a674983a1ec99ea6 hg19 Primary Tumor C3L-00510-02,C3L-00510-03 C3L-00510.WXS.T.hg38 C3L-00510 LUAD WXS tumor CPT0011910007 20dda897-e9c3-4180-bfae-686cff203424_gdc_realn.bam 30787897783 BAM NA 86533b96-e67b-4406-a7ff-10cc4ae81b6a 0a5caf7392401abf7b931408e7262c6f hg38 Primary Tumor C3L-00510-02,C3L-00510-03 -C3L-00528.MethArray.Green.T C3L-00528 GBM Methylation Array tumor CPT0017670007 202184990063_R08C01_Grn.idat 13676226 IDAT Green 39e71e4e-7859-45af-a063-f36c4a4b1d9c 39aa5a1110b2753964c94ed006e08d72 NA Primary Tumor C3L-00528-02,C3L-00528-03 -C3L-00528.MethArray.Red.T C3L-00528 GBM Methylation Array tumor CPT0017670007 202184990063_R08C01_Red.idat 13676226 IDAT Red bd6d6b05-7260-47f0-a7cb-4445dc387c2e d876a6fa7212b063d7f1062fddb0f0e7 NA Primary Tumor C3L-00528-02,C3L-00528-03 -C3L-00528.miRNA-Seq.T C3L-00528 GBM miRNA-Seq tumor CPT0017670010 181113_UNC31-K00269_0164_AH23NNBBXY_GTCCGC_S42_L002_R1_001.unaln.bam 263379773 BAM NA 11dba221-2cf0-4381-ab63-d655a85e2cf5 1992ea6f93ed115c1d9756956bbe2690 NA Primary Tumor C3L-00528-02,C3L-00528-03 -C3L-00528.miRNA-Seq.T.hg38 C3L-00528 GBM miRNA-Seq tumor CPT0017670010 97fa3ca1-5dc7-4fec-9bfc-4781ef0a780d_mirnaseq_gdc_realn.bam 294050293 BAM NA 4f2be8fc-bdd0-4417-bcef-08e2a1570a46 66576ad3d9819dbad73c1f930f6bd7a4 hg38 Primary Tumor C3L-00528-02,C3L-00528-03 -C3L-00528.RNA-Seq.chimeric.T.hg38 C3L-00528 GBM RNA-Seq tumor CPT0017670010 6990cffe-2a72-4cd4-ab4d-ee20c3746c30.rna_seq.chimeric.gdc_realn.bam 116627419 BAM chimeric 3b10ad07-3c3c-451c-833b-0cc0f5d0893f 6216b951a02513cf49775bb6751dcac0 hg38 Primary Tumor C3L-00528-02,C3L-00528-03 -C3L-00528.RNA-Seq.genomic.T.hg38 C3L-00528 GBM RNA-Seq tumor CPT0017670010 6990cffe-2a72-4cd4-ab4d-ee20c3746c30.rna_seq.genomic.gdc_realn.bam 8120578526 BAM genomic dc8bc9cf-a816-45d4-a36f-694568771b90 05bd2fb5f0c170d6b15838e6c306d96c hg38 Primary Tumor C3L-00528-02,C3L-00528-03 -C3L-00528.RNA-Seq.R1.T C3L-00528 GBM RNA-Seq tumor CPT0017670010 170818_UNC32-K00270_0050_AHL2FHBBXX_ATGTCA_S8_L002_R1_001.fastq.gz 3888668776 FASTQ NA 09588a09-bf91-4c35-977b-bc7d02d7de13 c00f2b3d0f500956a1202ecae8ffd1a6 NA Primary Tumor C3L-00528-02,C3L-00528-03 -C3L-00528.RNA-Seq.R2.T C3L-00528 GBM RNA-Seq tumor CPT0017670010 170818_UNC32-K00270_0050_AHL2FHBBXX_ATGTCA_S8_L002_R2_001.fastq.gz 4258505619 FASTQ NA 7b3935ea-c2e1-4ebe-8839-772b6d131fea 44d69e087bf6218b59bc06fefa8ba9c5 NA Primary Tumor C3L-00528-02,C3L-00528-03 -C3L-00528.RNA-Seq.transcriptome.T.hg38 C3L-00528 GBM RNA-Seq tumor CPT0017670010 6990cffe-2a72-4cd4-ab4d-ee20c3746c30.rna_seq.transcriptome.gdc_realn.bam 8869448960 BAM transcriptome 964c9b11-9521-4f6c-8810-d655c8e294a4 884101f9fa50c91ebc8ffd5047d2920a hg38 Primary Tumor C3L-00528-02,C3L-00528-03 -C3L-00528.WGS.N C3L-00528 GBM WGS blood_normal CPT0015500002 CPT0015500002.WholeGenome.RP-1303.bam 68493639722 BAM NA 95158903-a80e-444d-b870-960a3d5205a6 170a3a16a85b300a2152b7ed55f4e8dc hg19 Blood Derived Normal C3L-00528-31 -C3L-00528.WGS.N.hg38 C3L-00528 GBM WGS blood_normal CPT0015500002 19d40ca7-57bd-4396-990b-08df765b0ea5_gdc_realn.bam 107915085965 BAM NA cd82f611-4074-4cef-be9e-78dc06a720fc 47d89ae7f4f058b078c418d12b42e41e hg38 Blood Derived Normal C3L-00528-31 -C3L-00528.WGS.T C3L-00528 GBM WGS tumor CPT0017670007 CPT0017670007.WholeGenome.RP-1303.bam 76517587193 BAM NA ec64c90b-342a-417e-abe2-4d00b472362b 8407ffb3929a787df38e12a2df5ede24 hg19 Primary Tumor C3L-00528-02,C3L-00528-03 -C3L-00528.WGS.T.hg38 C3L-00528 GBM WGS tumor CPT0017670007 4045ff81-bda7-41d2-9cff-4123d19de044_gdc_realn.bam 116799603774 BAM NA 5a8acde5-1901-498b-80f5-8270e0f35202 cdc8410fb7f69b8ecee235f92670e1fd hg38 Primary Tumor C3L-00528-02,C3L-00528-03 -C3L-00528.WXS.N C3L-00528 GBM WXS blood_normal CPT0015500002 CPT0015500002.WholeExome.RP-1303.bam 39045910624 BAM NA 0fae7ed0-c210-4381-bd4a-f1eaf537e328 2f4b868f7b46cb5552af9bed7ef62ca9 hg19 Blood Derived Normal C3L-00528-31 -C3L-00528.WXS.N.hg38 C3L-00528 GBM WXS blood_normal CPT0015500002 19d40ca7-57bd-4396-990b-08df765b0ea5_gdc_realn.bam 53460585054 BAM NA f9daf773-6a74-488a-a8e5-4c410d96accf f995b456900a967b5f3d9eefa848bd48 hg38 Blood Derived Normal C3L-00528-31 -C3L-00528.WXS.T C3L-00528 GBM WXS tumor CPT0017670007 CPT0017670007.WholeExome.RP-1303.bam 37573892769 BAM NA c233ef27-8d8c-4a98-9e44-8090815295d2 3b0fa44dceada25591a996a688a7175e hg19 Primary Tumor C3L-00528-02,C3L-00528-03 -C3L-00528.WXS.T.hg38 C3L-00528 GBM WXS tumor CPT0017670007 4045ff81-bda7-41d2-9cff-4123d19de044_gdc_realn.bam 51485837843 BAM NA b40c5d39-56b2-4487-a890-0c70c4ffed9d c0e721460d1531e526e33df567242901 hg38 Primary Tumor C3L-00528-02,C3L-00528-03 C3L-00540.MethArray.Green.Tpb C3L-00540 AML Methylation Array tumor_peripheral_blood CPT0100710002 203561450073_R07C01_Grn.idat 13676221 IDAT Green 2ce50e32-d0a1-4741-91aa-b35ea43e233f e3798f98440b81506a1224aecfb59d0c NA Primary Blood Derived Cancer - Peripheral Blood C3L-00540-59 C3L-00540.MethArray.Red.Tpb C3L-00540 AML Methylation Array tumor_peripheral_blood CPT0100710002 203561450073_R07C01_Red.idat 13676221 IDAT Red 33fe8b6c-3189-47bb-a451-bbd771af5f3f 8cd52e7acdb994155f4c036140b3c2e9 NA Primary Blood Derived Cancer - Peripheral Blood C3L-00540-59 C3L-00540.miRNA-Seq.Tpb C3L-00540 AML miRNA-Seq tumor_peripheral_blood CPT0100720002 190508_UNC31-K00269_0215_BH7FYKBBXY_GTAGAG_S17_L001_R1_001.unaln.bam 160283483 BAM NA c17bc6d5-2127-401d-8b53-f1b3f2a13d00 2d15c543bc106fced059886415887022 NA Primary Blood Derived Cancer - Peripheral Blood C3L-00540-60 @@ -3229,51 +3049,6 @@ C3L-00563.WXS.N C3L-00563 UCEC WXS blood_normal CPT0065230002 CPT0065230002.Whol C3L-00563.WXS.N.hg38 C3L-00563 UCEC WXS blood_normal CPT0065230002 f38738f1-ed43-4824-9c84-b23a66d122b2_gdc_realn.bam 46328877788 BAM NA f80735d2-6a7e-4d58-965d-5b3b48520bd0 125c42c32209217978d7e1f1fa4120cd hg38 Blood Derived Normal C3L-00563-31 C3L-00563.WXS.T C3L-00563 UCEC WXS tumor CPT0063250009 CPT0063250009.WholeExome.RP-1303.bam 33371397481 BAM NA b420d0ad-d133-4c1a-8506-5dffabc3e722 7eb15fec58320f750bc8536f6fc3d708 hg19 Primary Tumor C3L-00563-03 C3L-00563.WXS.T.hg38 C3L-00563 UCEC WXS tumor CPT0063250009 e1743cdd-69f2-4643-810d-4f1c677560ac_gdc_realn.bam 45947584973 BAM NA 1b3536a2-9329-4dd7-a180-fdeb3e6c96e8 1e9daff48ca7dfe3b820229f6b14b650 hg38 Primary Tumor C3L-00563-03 -C3L-00564.MethArray.Green.T C3L-00564 SAR Methylation Array tumor CPT0023550012 202184900128_R06C01_Grn.idat 13676246 IDAT Green 63138d3d-99f2-46fc-8bbb-60fc38e14e97 b7fc4421291f21b242839fdcb905440a NA Primary Tumor C3L-00564-01 -C3L-00564.MethArray.Red.T C3L-00564 SAR Methylation Array tumor CPT0023550012 202184900128_R06C01_Red.idat 13676246 IDAT Red 077e8387-0ff6-4c15-a76c-ca4b3079d8b1 65454232ee57a51563e16f5fda13f876 NA Primary Tumor C3L-00564-01 -C3L-00564.miRNA-Seq.T C3L-00564 SAR miRNA-Seq tumor CPT0023550009 181012_UNC32-K00270_0124_AH223CBBXY_GGTAGC_S44_L005_R1_001.unaln.bam 245149214 BAM NA c69d5c43-a996-4d54-b0a3-b7fe1c1a9729 f33e55477eed9009b6362318bf3e9e47 NA Primary Tumor C3L-00564-01 -C3L-00564.miRNA-Seq.T.hg38 C3L-00564 SAR miRNA-Seq tumor CPT0023550009 0115218d-3598-4e17-bf95-d1863d84027e_mirnaseq_gdc_realn.bam 272636439 BAM NA a4cb4653-427b-43cf-8f7f-0045a1c4e7e6 2ae19821245ffd83558b3f5e0200c7eb hg38 Primary Tumor C3L-00564-01 -C3L-00564.RNA-Seq.chimeric.T.hg38 C3L-00564 SAR RNA-Seq tumor CPT0023550009 c576ac8a-c04c-47ef-96a3-b1f8dedb1265.rna_seq.chimeric.gdc_realn.bam 113121868 BAM chimeric eb3e6d5e-92a6-4477-a450-9e7573f4667c fa5d1d512c55fa6aa9717f10248048c3 hg38 Primary Tumor C3L-00564-01 -C3L-00564.RNA-Seq.genomic.T.hg38 C3L-00564 SAR RNA-Seq tumor CPT0023550009 c576ac8a-c04c-47ef-96a3-b1f8dedb1265.rna_seq.genomic.gdc_realn.bam 8950961999 BAM genomic bb743eee-2c25-4db0-8cd9-64a9e2710f40 dcbeddbab4b1ea0c80c868511192aaa1 hg38 Primary Tumor C3L-00564-01 -C3L-00564.RNA-Seq.R1.T C3L-00564 SAR RNA-Seq tumor CPT0023550009 170818_UNC32-K00270_0051_BHLCCHBBXX_ACTGAT_S18_L007_R1_001.fastq.gz 4446405326 FASTQ NA ca605625-0441-4e99-beb6-fede014f79b0 2bc7c8029f0d3d3b0c0d08227880bdb5 NA Primary Tumor C3L-00564-01 -C3L-00564.RNA-Seq.R2.T C3L-00564 SAR RNA-Seq tumor CPT0023550009 170818_UNC32-K00270_0051_BHLCCHBBXX_ACTGAT_S18_L007_R2_001.fastq.gz 4758035681 FASTQ NA eee79e70-7134-4f37-b588-122d951282a1 7e348c3e2f38e5b03cd2bb1055145bfd NA Primary Tumor C3L-00564-01 -C3L-00564.RNA-Seq.transcriptome.T.hg38 C3L-00564 SAR RNA-Seq tumor CPT0023550009 c576ac8a-c04c-47ef-96a3-b1f8dedb1265.rna_seq.transcriptome.gdc_realn.bam 12907338874 BAM transcriptome f4dc1e90-8583-4d9c-8663-21920992e739 9a9580fbe384c1da062c68ff5872af79 hg38 Primary Tumor C3L-00564-01 -C3L-00564.WGS.N C3L-00564 SAR WGS blood_normal CPT0024580002 CPT0024580002.WholeGenome.RP-1303.bam 86430350394 BAM NA 15a69264-55b4-4511-8379-a3bccd15a5c3 b671079def00544a3d84b5e074f81343 hg19 Blood Derived Normal C3L-00564-31 -C3L-00564.WGS.N.hg38 C3L-00564 SAR WGS blood_normal CPT0024580002 170f510c-9b0d-402b-a926-a2c2ad7ea363_gdc_realn.bam 128549962804 BAM NA bef1a4e4-6b79-44ae-9846-f9f5c771b385 1af9fdea9544eb3a1b74a0e1384b921d hg38 Blood Derived Normal C3L-00564-31 -C3L-00564.WGS.T C3L-00564 SAR WGS tumor CPT0023550012 CPT0023550012.WholeGenome.RP-1303.bam 82073676790 BAM NA b4724fb8-6790-430e-b3eb-748dc7078902 4dfebb01a9adda420fc573512af80223 hg19 Primary Tumor C3L-00564-01 -C3L-00564.WGS.T.hg38 C3L-00564 SAR WGS tumor CPT0023550012 13851dad-1772-4beb-a739-4bbd2e3abf74_gdc_realn.bam 121841300645 BAM NA 0fb2f3d2-2023-4f90-8189-00bd3c3d3ec9 ad3b7051eb3b88209e25a94980738221 hg38 Primary Tumor C3L-00564-01 -C3L-00564.WXS.N C3L-00564 SAR WXS blood_normal CPT0024580002 CPT0024580002.WholeExome.RP-1303.bam 34943752182 BAM NA 10849acb-c1eb-4189-880c-e36d292ba935 2297a558b702e08532176d8e123916af hg19 Blood Derived Normal C3L-00564-31 -C3L-00564.WXS.N.hg38 C3L-00564 SAR WXS blood_normal CPT0024580002 170f510c-9b0d-402b-a926-a2c2ad7ea363_gdc_realn.bam 47450199853 BAM NA 43b8e163-8631-448c-96aa-02dae82386e3 b9208e0ff4f683485cd61ac87bbf0fba hg38 Blood Derived Normal C3L-00564-31 -C3L-00564.WXS.T C3L-00564 SAR WXS tumor CPT0023550012 CPT0023550012.WholeExome.RP-1303.bam 35045248075 BAM NA 47eced0a-baa5-42c5-975f-39191ed81a66 07f404412c717eb6afa60f417054c38d hg19 Primary Tumor C3L-00564-01 -C3L-00564.WXS.T.hg38 C3L-00564 SAR WXS tumor CPT0023550012 13851dad-1772-4beb-a739-4bbd2e3abf74_gdc_realn.bam 48686742348 BAM NA 241fde4e-e916-4034-a9d8-924d5d9f156e 164ea0cf6f6fe81913e57422ad836bf8 hg38 Primary Tumor C3L-00564-01 -C3L-00567.MethArray.Green.T C3L-00567 SAR Methylation Array tumor CPT0023390006 202176300001_R07C01_Grn.idat 13676215 IDAT Green 42a7eea9-c506-4f3c-a1e2-2a086536b3be 14c8398ec36231a9f8e39551697d4e7a NA Primary Tumor C3L-00567-01 -C3L-00567.MethArray.Red.T C3L-00567 SAR Methylation Array tumor CPT0023390006 202176300001_R07C01_Red.idat 13676215 IDAT Red 0082a126-fd20-47bf-96e7-3e1e058daa86 68616d759dc20b0feda0f26b3999d58d NA Primary Tumor C3L-00567-01 -C3L-00567.miRNA-Seq.A C3L-00567 SAR miRNA-Seq tissue_normal CPT0023420006 181113_UNC31-K00269_0164_AH23NNBBXY_ACAGTG_S29_L006_R1_001.unaln.bam 186680300 BAM NA b7d326d5-ccf9-4472-8a43-8af7eca0c7af f3f8b807fe81c7ec927285c70f68c035 NA Solid Tissue Normal C3L-00567-06 -C3L-00567.miRNA-Seq.A.hg38 C3L-00567 SAR miRNA-Seq tissue_normal CPT0023420006 bcbff315-fa88-40a0-9b3e-2f1e6d38cbbc_mirnaseq_gdc_realn.bam 207845992 BAM NA 3ce2cc02-bd76-422e-a0e0-57207722ad98 6c1cee4651265e27b1c8926b9376d31b hg38 Solid Tissue Normal C3L-00567-06 -C3L-00567.miRNA-Seq.T C3L-00567 SAR miRNA-Seq tumor CPT0023390009 181012_UNC32-K00270_0124_AH223CBBXY_ATGAGC_S46_L005_R1_001.unaln.bam 301364396 BAM NA 988f93f5-a0dd-4e1b-9f5d-789bb5888e00 6c66bc584715bdc47e82c48dfb965119 NA Primary Tumor C3L-00567-01 -C3L-00567.miRNA-Seq.T.hg38 C3L-00567 SAR miRNA-Seq tumor CPT0023390009 5856698e-cf59-4db3-83ba-0bde006fd6f3_mirnaseq_gdc_realn.bam 330878418 BAM NA 4761d7f9-f160-4457-ac30-de5692c9e31b e92119ebe18756861f0fd988eafacad1 hg38 Primary Tumor C3L-00567-01 -C3L-00567.RNA-Seq.chimeric.A.hg38 C3L-00567 SAR RNA-Seq tissue_normal CPT0023420006 16c3a9eb-b7b0-479b-bfc4-834d2488481a.rna_seq.chimeric.gdc_realn.bam 49855459 BAM chimeric f83e0f8f-0b46-4354-9efd-4c169e6d9705 6a46a61e938979f0df5d9cc82964d985 hg38 Solid Tissue Normal C3L-00567-06 -C3L-00567.RNA-Seq.chimeric.T.hg38 C3L-00567 SAR RNA-Seq tumor CPT0023390009 753cd659-e42d-4e84-8b4c-02670198f63a.rna_seq.chimeric.gdc_realn.bam 74927392 BAM chimeric e3d1e22c-071d-48ef-a143-02d653fa6d3b ae4c131b3ebbed19dedd7f4475fbac01 hg38 Primary Tumor C3L-00567-01 -C3L-00567.RNA-Seq.genomic.A.hg38 C3L-00567 SAR RNA-Seq tissue_normal CPT0023420006 16c3a9eb-b7b0-479b-bfc4-834d2488481a.rna_seq.genomic.gdc_realn.bam 9103761972 BAM genomic 063451a9-73f6-47a9-8e93-04cf3ee9771f eb458d3f68fd38480f496f40a6ae6fb5 hg38 Solid Tissue Normal C3L-00567-06 -C3L-00567.RNA-Seq.genomic.T.hg38 C3L-00567 SAR RNA-Seq tumor CPT0023390009 753cd659-e42d-4e84-8b4c-02670198f63a.rna_seq.genomic.gdc_realn.bam 8593337508 BAM genomic fc8e77c7-146e-487f-b0b3-46ee6f895e8e 11b19f5da97f969ece96708fe1fedaad hg38 Primary Tumor C3L-00567-01 -C3L-00567.RNA-Seq.R1.A C3L-00567 SAR RNA-Seq tissue_normal CPT0023420006 180516_UNC32-K00270_0095_AHTY5LBBXX_ACAGTG_S23_L006_R1_001.fastq.gz 4259444478 FASTQ NA cfb5551a-cf8d-4454-b5ec-b19e393a0e47 742163408c72f573c3f834804ce00900 NA Solid Tissue Normal C3L-00567-06 -C3L-00567.RNA-Seq.R1.T C3L-00567 SAR RNA-Seq tumor CPT0023390009 170818_UNC32-K00270_0051_BHLCCHBBXX_CGATGT_S15_L008_R1_001.fastq.gz 3464542155 FASTQ NA 68a142c5-fa2d-416e-a78c-a92e9727b9c2 446211d860eeec1810ed9de6d15b2d92 NA Primary Tumor C3L-00567-01 -C3L-00567.RNA-Seq.R2.A C3L-00567 SAR RNA-Seq tissue_normal CPT0023420006 180516_UNC32-K00270_0095_AHTY5LBBXX_ACAGTG_S23_L006_R2_001.fastq.gz 4718625388 FASTQ NA 2904c08e-e826-4c0b-9492-f1efec16c312 077417973109c9052d2814d53bdc7de7 NA Solid Tissue Normal C3L-00567-06 -C3L-00567.RNA-Seq.R2.T C3L-00567 SAR RNA-Seq tumor CPT0023390009 170818_UNC32-K00270_0051_BHLCCHBBXX_CGATGT_S15_L008_R2_001.fastq.gz 3811509771 FASTQ NA 64ed2c35-8b82-4df9-a91f-0e80db88dfa2 ddf0893a79a2a04d9bf348ef2abcb23a NA Primary Tumor C3L-00567-01 -C3L-00567.RNA-Seq.transcriptome.A.hg38 C3L-00567 SAR RNA-Seq tissue_normal CPT0023420006 16c3a9eb-b7b0-479b-bfc4-834d2488481a.rna_seq.transcriptome.gdc_realn.bam 11958515535 BAM transcriptome 47a64284-9d00-4537-88e0-1730d2f2eea8 d68ef2a7fcf0744180621cc2451e979e hg38 Solid Tissue Normal C3L-00567-06 -C3L-00567.RNA-Seq.transcriptome.T.hg38 C3L-00567 SAR RNA-Seq tumor CPT0023390009 753cd659-e42d-4e84-8b4c-02670198f63a.rna_seq.transcriptome.gdc_realn.bam 9849131344 BAM transcriptome 52fdcdc1-3c89-4d97-94e9-7714180617d2 4e529caa9fc3bd7c31edfe99e2768816 hg38 Primary Tumor C3L-00567-01 -C3L-00567.WGS.A C3L-00567 SAR WGS tissue_normal CPT0023420009 CPT0023420009.WholeGenome.RP-1303.bam 61081997658 BAM NA 9b3c7ce8-afb3-46b9-9b1d-4ceb883431fd 8df8a6c902fd2a4776e456a2e0e44712 hg19 Solid Tissue Normal C3L-00567-06 -C3L-00567.WGS.A.hg38 C3L-00567 SAR WGS tissue_normal CPT0023420009 ccc4bd5c-9dff-4e46-b5c0-e80309d95787_wgs_gdc_realn.bam 89466513387 BAM NA 6843081b-d7c9-452a-a1a1-adebe2189da8 5ee4616d04efff6aabcaa235da15cc35 hg38 Solid Tissue Normal C3L-00567-06 -C3L-00567.WGS.N C3L-00567 SAR WGS blood_normal CPT0024560002 CPT0024560002.WholeGenome.RP-1303.bam 78265278053 BAM NA 59aac559-707a-436a-a0ee-6a38383e05dd 6bee5160f1f07526fa66761e341cdc54 hg19 Blood Derived Normal C3L-00567-31 -C3L-00567.WGS.N.hg38 C3L-00567 SAR WGS blood_normal CPT0024560002 31b10753-9e32-4c4f-b718-bf3e6e598b89_gdc_realn.bam 116006244915 BAM NA 0d021637-ca46-4acc-b283-e59f9414f97d 363a599e126063937e932ab90cb67474 hg38 Blood Derived Normal C3L-00567-31 -C3L-00567.WGS.T C3L-00567 SAR WGS tumor CPT0023390006 CPT0023390006.WholeGenome.RP-1303.bam 79880280087 BAM NA da31dd11-4aea-47da-bcd7-5097bece3524 9ae17c057e7eff20e6c4a1826bef4340 hg19 Primary Tumor C3L-00567-01 -C3L-00567.WGS.T.hg38 C3L-00567 SAR WGS tumor CPT0023390006 ad9fc498-3eec-467e-978c-d35aab0a2c79_gdc_realn.bam 120803182144 BAM NA 596674ed-5ffd-4fae-8d0f-60bd48ab8bd7 9355767c7649ad402fa6cff969081d4a hg38 Primary Tumor C3L-00567-01 -C3L-00567.WXS.A C3L-00567 SAR WXS tissue_normal CPT0023420009 CPT0023420009.WholeExome.RP-1303.bam 36234389020 BAM NA d81f0ac8-470c-4e79-b3bf-9cc1e3196500 be0462fd595f546d53da1ffa47c92d62 hg19 Solid Tissue Normal C3L-00567-06 -C3L-00567.WXS.A.hg38 C3L-00567 SAR WXS tissue_normal CPT0023420009 ccc4bd5c-9dff-4e46-b5c0-e80309d95787_wxs_gdc_realn.bam 48080613215 BAM NA c1065b87-2568-4764-8c4c-a2b347f2924e 166c70068d21b85cec571c6fcdf8205f hg38 Solid Tissue Normal C3L-00567-06 -C3L-00567.WXS.N C3L-00567 SAR WXS blood_normal CPT0024560002 CPT0024560002.WholeExome.RP-1303.bam 32262118737 BAM NA 1d27e5cc-24da-4969-84df-f27496eb31f6 9e26e83df9814757cced75c664de66da hg19 Blood Derived Normal C3L-00567-31 -C3L-00567.WXS.N.hg38 C3L-00567 SAR WXS blood_normal CPT0024560002 31b10753-9e32-4c4f-b718-bf3e6e598b89_gdc_realn.bam 44105781841 BAM NA a523324f-4984-4fa8-b34d-2ff6cb42d70b f687f047ca8b59b99d059abc1d34f121 hg38 Blood Derived Normal C3L-00567-31 -C3L-00567.WXS.T C3L-00567 SAR WXS tumor CPT0023390006 CPT0023390006.WholeExome.RP-1303.bam 26034381153 BAM NA cae614c0-6c4e-46c2-b284-d973c10263dd c6a69cb8a6037f97810f46e7cbcd1e78 hg19 Primary Tumor C3L-00567-01 -C3L-00567.WXS.T.hg38 C3L-00567 SAR WXS tumor CPT0023390006 ad9fc498-3eec-467e-978c-d35aab0a2c79_gdc_realn.bam 35816039577 BAM NA 87b5bbee-395e-46c9-b20e-768e0bbf874c 00e4917d04ac6a36d9dfe8f63cf37d05 hg38 Primary Tumor C3L-00567-01 C3L-00568.MethArray.Green.A C3L-00568 LSCC Methylation Array tissue_normal CPT0023500006 203219650100_R02C01_Grn.idat 13676221 IDAT Green a1304bb1-cc76-4935-b76c-c0707fd6194f 242f661acd7b35e5e3d5021ea5778b7d NA Solid Tissue Normal C3L-00568-06 C3L-00568.MethArray.Green.T C3L-00568 LSCC Methylation Array tumor CPT0023470005 202176290145_R06C01_Grn.idat 13676225 IDAT Green bc833d31-8ebd-4e77-9d4b-4662f3bc9a94 da9d5c713db3098f8b57138cbdaf145b NA Primary Tumor C3L-00568-01 C3L-00568.MethArray.Red.A C3L-00568 LSCC Methylation Array tissue_normal CPT0023500006 203219650100_R02C01_Red.idat 13676221 IDAT Red 1f498546-aa3b-49d6-bd3b-d0b2514e6b58 f18aac379b6282f5a9de293a931bb35d NA Solid Tissue Normal C3L-00568-06 @@ -3483,23 +3258,6 @@ C3L-00589.WXS.T C3L-00589 PDA WXS tumor CPT0063970007 CPT0063970007.WholeExome.R C3L-00589.WXS.T.hg38 C3L-00589 PDA WXS tumor CPT0063970007 2fe897e3-129e-4d02-a5b7-a4f3e64192e7_gdc_realn.bam 42564104477 BAM NA a12a0e97-4198-4de8-a22f-975bd2ded771 c15fc20cef0db502ba6c8e96dfbd2edb hg38 Primary Tumor C3L-00589-01,C3L-00589-02 C3L-00589.WXS.T.hg38.high_cov C3L-00589 PDA WXS tumor CPT0063970007_1 c8fdda8f-39ff-4740-b59c-7e680c4cb6a6_wxs_gdc_realn.bam 73216789844 BAM NA c918ad1a-40ca-43d2-b62d-ee06f9fdd26b 4b6b835f1b19497c874108cf1f10db42 hg38 Primary Tumor C3L-00589-01 local_meta=.high_cov C3L-00589.WXS.T.high_cov C3L-00589 PDA WXS tumor CPT0063970007_1 CPT0063970007_1.WholeExome.RP-1303.bam 53049437912 BAM NA 22101c10-0134-411d-a5eb-61dc7332eb01 69903b672acef07d0ea32d18d75fcdfe hg19 Primary Tumor C3L-00589-01 local_meta=.high_cov -C3L-00591.MethArray.Green.T C3L-00591 GBM Methylation Array tumor CPT0017810007 202176300111_R07C01_Grn.idat 13676226 IDAT Green 4dbc8ea7-8b62-4393-b255-3fe460cf3561 8e75c4fb6bbf37b632b38e10aebf9767 NA Primary Tumor C3L-00591-01,C3L-00591-03 -C3L-00591.MethArray.Red.T C3L-00591 GBM Methylation Array tumor CPT0017810007 202176300111_R07C01_Red.idat 13676226 IDAT Red 2698ecd0-c6d3-4a19-a249-0f1548b022e2 e547301bc2a0513256e5d94d866f7d74 NA Primary Tumor C3L-00591-01,C3L-00591-03 -C3L-00591.miRNA-Seq.T C3L-00591 GBM miRNA-Seq tumor CPT0017810010 181113_UNC31-K00269_0164_AH23NNBBXY_GTGAAA_S43_L002_R1_001.unaln.bam 307995687 BAM NA dd35b7f0-3f19-4b02-95d7-ff095cc593f1 ee77f1f691dad0bb8ebe71e7d02c7170 NA Primary Tumor C3L-00591-01,C3L-00591-03 -C3L-00591.miRNA-Seq.T.hg38 C3L-00591 GBM miRNA-Seq tumor CPT0017810010 2d0dc5f0-e002-430c-8540-a6b9e4277098_mirnaseq_gdc_realn.bam 341819129 BAM NA bdd4ade9-50ca-4a54-9264-36f9d0bfa5fd 04002e8ecc278db31cad88b12746f918 hg38 Primary Tumor C3L-00591-01,C3L-00591-03 -C3L-00591.RNA-Seq.chimeric.T.hg38 C3L-00591 GBM RNA-Seq tumor CPT0017810010 521c21e6-c49e-4113-bb42-4b700ea5ed1a.rna_seq.chimeric.gdc_realn.bam 98137750 BAM chimeric de23d55c-661a-44e2-bbfb-67a98c402e58 fee3c0c2f02cd07d712f7b9af4f6b1ee hg38 Primary Tumor C3L-00591-01,C3L-00591-03 -C3L-00591.RNA-Seq.genomic.T.hg38 C3L-00591 GBM RNA-Seq tumor CPT0017810010 521c21e6-c49e-4113-bb42-4b700ea5ed1a.rna_seq.genomic.gdc_realn.bam 8106992696 BAM genomic 5e3012fa-3ba4-4d7f-9b17-30d57281332e 4c903e25568e5d96026ed7572b7ad270 hg38 Primary Tumor C3L-00591-01,C3L-00591-03 -C3L-00591.RNA-Seq.R1.T C3L-00591 GBM RNA-Seq tumor CPT0017810010 170818_UNC32-K00270_0051_BHLCCHBBXX_TGACCA_S13_L004_R1_001.fastq.gz 3754191459 FASTQ NA 05139df5-3a85-4380-bdc1-efbfe764d1a9 f3309072205116a88d9dcb85a33ca75c NA Primary Tumor C3L-00591-01,C3L-00591-03 -C3L-00591.RNA-Seq.R2.T C3L-00591 GBM RNA-Seq tumor CPT0017810010 170818_UNC32-K00270_0051_BHLCCHBBXX_TGACCA_S13_L004_R2_001.fastq.gz 4077879362 FASTQ NA eae7cd2c-46b0-448b-9666-56871463002c 0d6b384354ee5c5b43fcbdf408c9ccfb NA Primary Tumor C3L-00591-01,C3L-00591-03 -C3L-00591.RNA-Seq.transcriptome.T.hg38 C3L-00591 GBM RNA-Seq tumor CPT0017810010 521c21e6-c49e-4113-bb42-4b700ea5ed1a.rna_seq.transcriptome.gdc_realn.bam 9287683438 BAM transcriptome 198b2591-4b21-4878-a50b-db9b08f4ed71 f96e312073fe20ab72828de22050f379 hg38 Primary Tumor C3L-00591-01,C3L-00591-03 -C3L-00591.WGS.N C3L-00591 GBM WGS blood_normal CPT0015570002 CPT0015570002.WholeGenome.RP-1303.bam 98123262059 BAM NA 9cd2b59e-ac01-4725-a71e-a454b7c77327 36ae87eeed4f46c1c088f738445e7b4f hg19 Blood Derived Normal C3L-00591-31 -C3L-00591.WGS.N.hg38 C3L-00591 GBM WGS blood_normal CPT0015570002 3632d20f-f2f9-4939-878b-1037c915cea6_gdc_realn.bam 153973639303 BAM NA 48514219-2827-49a3-a3a2-8278595707e2 a03bc854c224f42bb1cb0d820e23b41a hg38 Blood Derived Normal C3L-00591-31 -C3L-00591.WGS.T C3L-00591 GBM WGS tumor CPT0017810007 CPT0017810007.WholeGenome.RP-1303.bam 68543415344 BAM NA 85ccca4b-e84a-4a0e-abab-f4db75cf4920 1d80b3d5501c4bc44f2345e2ece2aedf hg19 Primary Tumor C3L-00591-01,C3L-00591-03 -C3L-00591.WGS.T.hg38 C3L-00591 GBM WGS tumor CPT0017810007 5736b539-4c8c-4b7e-b846-bdabc53b42c6_gdc_realn.bam 101839321944 BAM NA ac860b57-f9e9-4c46-bf05-a4613c3f1fc2 d14d75c9c0673291ee4817edc1caf4a6 hg38 Primary Tumor C3L-00591-01,C3L-00591-03 -C3L-00591.WXS.N C3L-00591 GBM WXS blood_normal CPT0015570002 CPT0015570002.WholeExome.RP-1303.bam 29705457005 BAM NA d8c0c19c-9f81-4ea6-9c09-6eb3a5f67b98 e513e0f4c83026ce4b922f942effd078 hg19 Blood Derived Normal C3L-00591-31 -C3L-00591.WXS.N.hg38 C3L-00591 GBM WXS blood_normal CPT0015570002 3632d20f-f2f9-4939-878b-1037c915cea6_gdc_realn.bam 40142092326 BAM NA 8d341a31-492f-47fa-a957-c5b326b435d7 304706219bdba29e5c96fe907c33c048 hg38 Blood Derived Normal C3L-00591-31 -C3L-00591.WXS.T C3L-00591 GBM WXS tumor CPT0017810007 CPT0017810007.WholeExome.RP-1303.bam 40617634776 BAM NA 521d3b15-a442-4132-abb6-6994aef5098b 694e3de43f5189bff18dfa8d3049e69e hg19 Primary Tumor C3L-00591-01,C3L-00591-03 -C3L-00591.WXS.T.hg38 C3L-00591 GBM WXS tumor CPT0017810007 5736b539-4c8c-4b7e-b846-bdabc53b42c6_gdc_realn.bam 54898879964 BAM NA eb41c03c-43da-4fa5-8615-64032526be9c 789cad3547b2530b8ac46b18df5eeb5d hg38 Primary Tumor C3L-00591-01,C3L-00591-03 C3L-00598.MethArray.Green.T.DEEP_vQZPEM C3L-00598 PDA Methylation Array tumor CPT0019410010 202176290087_R07C01_Grn.idat 13676216 IDAT Green bfd09202-b7de-4dc2-b517-93ac3704cdc0 565233a4e78c733a4d08b83d90bd94cb NA Primary Tumor C3L-00598-02,C3L-00598-03 sample_tag=DEEP_vQZPEM Duplicate item: Additional DNA for PDA Deep Sequencing C3L-00598.MethArray.Red.T.DEEP_vQZPEM C3L-00598 PDA Methylation Array tumor CPT0019410010 202176290087_R07C01_Red.idat 13676216 IDAT Red 3fc12e75-d229-44ce-ad2f-4a7677130b7c 2cc8e25bde9c75a3c4012a601eb53aab NA Primary Tumor C3L-00598-02,C3L-00598-03 sample_tag=DEEP_vQZPEM Duplicate item: Additional DNA for PDA Deep Sequencing C3L-00598.miRNA-Seq.T C3L-00598 PDA miRNA-Seq tumor CPT0019410007 181012_UNC32-K00270_0124_AH223CBBXY_CAGATC_S28_L004_R1_001.unaln.bam 218737465 BAM NA e1b0bfa6-bd6c-4ef5-bb84-efe879bd137a 8a42191575df0ff644a06976b1e5cba5 NA Primary Tumor C3L-00598-02,C3L-00598-03 @@ -3872,40 +3630,6 @@ C3L-00625.WXS.T C3L-00625 PDA WXS tumor CPT0081470007 CPT0081470007.WholeExome.R C3L-00625.WXS.T.hg38 C3L-00625 PDA WXS tumor CPT0081470007 35cbfe6b-e6d9-4191-8f9f-c1a53233e611_gdc_realn.bam 57568809799 BAM NA e3b859e5-ffba-400e-9e76-723f6d33bf7d 109a0dea3cf7b3cfd92666067c5f5566 hg38 Primary Tumor C3L-00625-02,C3L-00625-03 C3L-00625.WXS.T.hg38.high_cov C3L-00625 PDA WXS tumor CPT0081470007_1 e9f04d79-6cd2-4618-98ae-f75b2bf403bc_wxs_gdc_realn.bam 97609436413 BAM NA cc51d894-8cba-4bc0-a3ec-b1af4036ec11 b326b05e22bdfa376ebbbfc100ad3edc hg38 Primary Tumor C3L-00625-02 local_meta=.high_cov C3L-00625.WXS.T.high_cov C3L-00625 PDA WXS tumor CPT0081470007_1 CPT0081470007_1.WholeExome.RP-1303.bam 70487273351 BAM NA 7c93d9f1-ada1-4085-8ce1-2cdbffcdae7c d35e91055738b5c8110e3f73b193e699 hg19 Primary Tumor C3L-00625-02 local_meta=.high_cov -C3L-00629.MethArray.Green.T C3L-00629 CM Methylation Array tumor CPT0017250007 202184990008_R07C01_Grn.idat 13676216 IDAT Green 0892796a-fc76-4af3-a325-6ac1c72ca01f c0481b068205815d3d743c8a4e1a9fed NA Primary Tumor C3L-00629-01,C3L-00629-02,C3L-00629-03 -C3L-00629.MethArray.Red.T C3L-00629 CM Methylation Array tumor CPT0017250007 202184990008_R07C01_Red.idat 13676216 IDAT Red 8b4324ba-25a1-4025-a0f0-76495502d34a 7b7f8d0323f4b2f25ebb572967e0e867 NA Primary Tumor C3L-00629-01,C3L-00629-02,C3L-00629-03 -C3L-00629.miRNA-Seq.T.ARNA_vlMrQ0 C3L-00629 CM miRNA-Seq tumor CPT0017250010 181113_UNC31-K00269_0164_AH23NNBBXY_GTCCGC_S42_L004_R1_001.unaln.bam 110355841 BAM NA 054f201f-a539-4fb2-8d75-1dfb11483969 ed534abffb01bbb9e381b2a797558a9b NA Primary Tumor C3L-00629-01,C3L-00629-02,C3L-00629-03 sample_tag=ARNA_vlMrQ0 Duplicate item: Additional RNA requested -C3L-00629.miRNA-Seq.T.ARNA_vlMrQ0.hg38 C3L-00629 CM miRNA-Seq tumor CPT0017250010 a98e11a7-b08e-4453-abd5-49c7dff19f53_mirnaseq_gdc_realn.bam 124123039 BAM NA ecf19dd9-e32f-49f4-a80f-af585e904d59 2b163f8ed04eaabf70010a706cbd474c hg38 Primary Tumor C3L-00629-01,C3L-00629-02,C3L-00629-03 sample_tag=ARNA_vlMrQ0 Duplicate item: Additional RNA requested -C3L-00629.RNA-Seq.chimeric.T.hg38 C3L-00629 CM RNA-Seq tumor CPT0017250014 21bd2073-aac0-42cb-bf98-4c9eb9b7ca62.rna_seq.chimeric.gdc_realn.bam 52555538 BAM chimeric f8fb2258-0937-44cc-a92e-1e7c4869766a 49493c801458629a2af100b1debf71ab hg38 Primary Tumor C3L-00629-03 -C3L-00629.RNA-Seq.genomic.T.hg38 C3L-00629 CM RNA-Seq tumor CPT0017250014 21bd2073-aac0-42cb-bf98-4c9eb9b7ca62.rna_seq.genomic.gdc_realn.bam 12610340300 BAM genomic 95126a35-f30c-4fbe-8a76-0f0b1a5951c6 9043cbac599bc477d2139d5d2f36b729 hg38 Primary Tumor C3L-00629-03 -C3L-00629.RNA-Seq.R1.T C3L-00629 CM RNA-Seq tumor CPT0017250014 171011_UNC31-K00269_0086_AHLJLCBBXX_TAGCTT_S13_L004_R1_001.fastq.gz 5321994380 FASTQ NA dc60c8bd-59ca-4f9f-b6ad-ea12fcec0691 950f1a93cebc317546638b16f9b2f85b NA Primary Tumor C3L-00629-03 -C3L-00629.RNA-Seq.R2.T C3L-00629 CM RNA-Seq tumor CPT0017250014 171011_UNC31-K00269_0086_AHLJLCBBXX_TAGCTT_S13_L004_R2_001.fastq.gz 5675144981 FASTQ NA 64b1a836-2617-417e-99be-e78fb00fd641 36c21f0aead3467409aafd8a4eec5e4c NA Primary Tumor C3L-00629-03 -C3L-00629.RNA-Seq.transcriptome.T.hg38 C3L-00629 CM RNA-Seq tumor CPT0017250014 21bd2073-aac0-42cb-bf98-4c9eb9b7ca62.rna_seq.transcriptome.gdc_realn.bam 13117413155 BAM transcriptome c7f7c15a-a086-4df6-b9d5-a4f79a7a7b83 3ae35ed971bdb4c7f0024a2fef064b65 hg38 Primary Tumor C3L-00629-03 -C3L-00629.WGS.N C3L-00629 CM WGS blood_normal CPT0015350002 CPT0015350002.WholeGenome.RP-1303.bam 86960616885 BAM NA 85d3e257-1d23-42e4-847e-e6a286e261ee 36c4b2bf5a848f5d328a2f23aefe4171 hg19 Blood Derived Normal C3L-00629-31 -C3L-00629.WGS.N.hg38 C3L-00629 CM WGS blood_normal CPT0015350002 d2ba11cc-9d03-42d9-9c81-67137c29652f_gdc_realn.bam 136984362715 BAM NA 27c298c4-200e-40af-b5bc-6495cddef868 bb7a5b9c40ea51c0c56826a0897a8f00 hg38 Blood Derived Normal C3L-00629-31 -C3L-00629.WGS.T C3L-00629 CM WGS tumor CPT0017250007 CPT0017250007.WholeGenome.RP-1303.bam 71599847598 BAM NA dd7d3552-65fb-4c27-bdfa-aeaccb8b0cae 54e7290fabca5db6fef027143af458a9 hg19 Primary Tumor C3L-00629-01,C3L-00629-02,C3L-00629-03 -C3L-00629.WGS.T.hg38 C3L-00629 CM WGS tumor CPT0017250007 f8e6ace4-efd1-464c-8748-565c778c3b7d_gdc_realn.bam 108178447233 BAM NA 257b542f-d10e-42e2-8c1d-ef67cd822131 7cd651bef9145d90d2a4bd03be35ad1e hg38 Primary Tumor C3L-00629-01,C3L-00629-02,C3L-00629-03 -C3L-00629.WXS.N C3L-00629 CM WXS blood_normal CPT0015350002 CPT0015350002.WholeExome.RP-1303.bam 32836974840 BAM NA b9ee2dd2-0dfa-4eb4-9b59-f02653d0ba16 da0ff515e0e9a4a1ffd3d328c24b0bf2 hg19 Blood Derived Normal C3L-00629-31 -C3L-00629.WXS.N.hg38 C3L-00629 CM WXS blood_normal CPT0015350002 d2ba11cc-9d03-42d9-9c81-67137c29652f_gdc_realn.bam 45289540169 BAM NA b55fd9e7-c4b6-4517-b7f0-1a71c39de805 7658de28fdb198c9dd04f5a0b5fcfefd hg38 Blood Derived Normal C3L-00629-31 -C3L-00629.WXS.T C3L-00629 CM WXS tumor CPT0017250007 CPT0017250007.WholeExome.RP-1303.bam 27937683748 BAM NA fd5829e3-2226-4339-943b-01dea4bf1dff 3e00cc4b3f810116885f274031432ff4 hg19 Primary Tumor C3L-00629-01,C3L-00629-02,C3L-00629-03 -C3L-00629.WXS.T.hg38 C3L-00629 CM WXS tumor CPT0017250007 f8e6ace4-efd1-464c-8748-565c778c3b7d_gdc_realn.bam 39200213267 BAM NA be33e6b9-1a41-4a54-8743-60bc110c11f3 ebe595f4665c833999c6d4a8a4c409f7 hg38 Primary Tumor C3L-00629-01,C3L-00629-02,C3L-00629-03 -C3L-00631.MethArray.Green.T C3L-00631 GBM Methylation Array tumor CPT0017910007 202178770111_R08C01_Grn.idat 13676231 IDAT Green 26132020-f1ec-42f4-9ee6-97406c12d73e d3a6a0b39390ab31027267a624dd63e7 NA Primary Tumor C3L-00631-02,C3L-00631-03 -C3L-00631.MethArray.Red.T C3L-00631 GBM Methylation Array tumor CPT0017910007 202178770111_R08C01_Red.idat 13676231 IDAT Red 82f032cc-59a7-4dd4-892e-b8d36e027cd9 3df7d87822f8172e0b51e474778fd700 NA Primary Tumor C3L-00631-02,C3L-00631-03 -C3L-00631.miRNA-Seq.T C3L-00631 GBM miRNA-Seq tumor CPT0017910010 181012_UNC32-K00270_0124_AH223CBBXY_GTCCGC_S39_L004_R1_001.unaln.bam 216421854 BAM NA 72606440-5b14-4b81-b4b3-3b3773e79ffd 8bb5bf4fb7ce264b0f0d9fd087b66dbc NA Primary Tumor C3L-00631-02,C3L-00631-03 -C3L-00631.miRNA-Seq.T.hg38 C3L-00631 GBM miRNA-Seq tumor CPT0017910010 b438d773-ed89-49e3-878a-c1564556108f_mirnaseq_gdc_realn.bam 243800298 BAM NA 0cca7129-9ee5-4c6f-9fa9-a30c3fd2f00e 3351beac97b9b0d4a8f665080104d3fb hg38 Primary Tumor C3L-00631-02,C3L-00631-03 -C3L-00631.RNA-Seq.chimeric.T.hg38 C3L-00631 GBM RNA-Seq tumor CPT0017910010 6d13d995-ea2d-4943-8f56-e48645dab265.rna_seq.chimeric.gdc_realn.bam 110768172 BAM chimeric 42022a60-ba15-4050-8086-19790ad5cd57 bf8f83f42fb4a6cc4a377d66fddc0629 hg38 Primary Tumor C3L-00631-02,C3L-00631-03 -C3L-00631.RNA-Seq.genomic.T.hg38 C3L-00631 GBM RNA-Seq tumor CPT0017910010 6d13d995-ea2d-4943-8f56-e48645dab265.rna_seq.genomic.gdc_realn.bam 9229116221 BAM genomic 6586c146-4a70-417f-8bf4-14eaef610660 962d16e96bb6e6e5a17b438992d5af88 hg38 Primary Tumor C3L-00631-02,C3L-00631-03 -C3L-00631.RNA-Seq.R1.T C3L-00631 GBM RNA-Seq tumor CPT0017910010 170818_UNC32-K00270_0051_BHLCCHBBXX_GATCAG_S11_L003_R1_001.fastq.gz 4260788061 FASTQ NA dc56f593-4b2c-43a3-8510-eb5fd3c5a636 a74be937472c3d93997ddc25f956f6a3 NA Primary Tumor C3L-00631-02,C3L-00631-03 -C3L-00631.RNA-Seq.R2.T C3L-00631 GBM RNA-Seq tumor CPT0017910010 170818_UNC32-K00270_0051_BHLCCHBBXX_GATCAG_S11_L003_R2_001.fastq.gz 4563328441 FASTQ NA f07fda88-50e4-419c-a63e-495af06950f9 a14ac68374e73764fa2f146ab3b32fda NA Primary Tumor C3L-00631-02,C3L-00631-03 -C3L-00631.RNA-Seq.transcriptome.T.hg38 C3L-00631 GBM RNA-Seq tumor CPT0017910010 6d13d995-ea2d-4943-8f56-e48645dab265.rna_seq.transcriptome.gdc_realn.bam 10891791562 BAM transcriptome 968f44f8-9f47-42c7-b838-ede90e208c2b cf53be04dec84384fdd7677764c45dd8 hg38 Primary Tumor C3L-00631-02,C3L-00631-03 -C3L-00631.WGS.N C3L-00631 GBM WGS blood_normal CPT0015580002 CPT0015580002.WholeGenome.RP-1303.bam 84709549868 BAM NA b27fa888-5b67-45f2-9b83-6c6da383a8a1 031e59a9ad4d80a83f8ee53b7a555f13 hg19 Blood Derived Normal C3L-00631-31 -C3L-00631.WGS.N.hg38 C3L-00631 GBM WGS blood_normal CPT0015580002 ba314412-f2aa-4afc-a303-f484d4d6475b_gdc_realn.bam 134087049398 BAM NA 7c125c1d-248b-4df3-a9f8-83a889bd5d56 b2c76613f9b8ba32c68ef853ca570817 hg38 Blood Derived Normal C3L-00631-31 -C3L-00631.WGS.T C3L-00631 GBM WGS tumor CPT0017910007 CPT0017910007.WholeGenome.RP-1303.bam 66754726054 BAM NA fec7e1a5-cff2-44cc-b8bd-b4a574fc5be1 1b408e6bfa46e7392fa975632c40f912 hg19 Primary Tumor C3L-00631-02,C3L-00631-03 -C3L-00631.WGS.T.hg38 C3L-00631 GBM WGS tumor CPT0017910007 89bc34cf-1175-4cf3-a93a-3836a78ba599_gdc_realn.bam 100197898657 BAM NA 0985e93c-fecd-4821-8010-7f7977332cbc 64846a3fb125d2e3a63b1656138e0c3b hg38 Primary Tumor C3L-00631-02,C3L-00631-03 -C3L-00631.WXS.N C3L-00631 GBM WXS blood_normal CPT0015580002 CPT0015580002.WholeExome.RP-1303.bam 29489284608 BAM NA 75684bf2-6d37-4eca-a24e-6d639b3ebfa2 0d3fab5dd2a1ad9f6ec070beb78b0848 hg19 Blood Derived Normal C3L-00631-31 -C3L-00631.WXS.N.hg38 C3L-00631 GBM WXS blood_normal CPT0015580002 ba314412-f2aa-4afc-a303-f484d4d6475b_gdc_realn.bam 40522331055 BAM NA ff7e91ae-4713-408d-9fb2-f381d084480d 31859f112ee791e6f9530357208213cd hg38 Blood Derived Normal C3L-00631-31 -C3L-00631.WXS.T C3L-00631 GBM WXS tumor CPT0017910007 CPT0017910007.WholeExome.RP-1303.bam 30847418662 BAM NA 64eecdd2-3bbd-433a-bfaa-20add9c246e1 eacf726f3163342f63fb468fd5a9deb1 hg19 Primary Tumor C3L-00631-02,C3L-00631-03 -C3L-00631.WXS.T.hg38 C3L-00631 GBM WXS tumor CPT0017910007 89bc34cf-1175-4cf3-a93a-3836a78ba599_gdc_realn.bam 41127020510 BAM NA 505ef9b6-60c3-465e-b159-e828648e9fdf 3100136ce30db18e45302d1df4d8e36f hg38 Primary Tumor C3L-00631-02,C3L-00631-03 C3L-00640.MethArray.Green.A C3L-00640 PDA Methylation Array tissue_normal CPT0064570009 203561450048_R03C01_Grn.idat 13676221 IDAT Green d249d09d-c099-4b47-9972-66cd0cfb6158 47f175d9d2ad7a1ff604d65377f678d0 NA Solid Tissue Normal C3L-00640-06 C3L-00640.MethArray.Green.T C3L-00640 PDA Methylation Array tumor CPT0064520010 202176300001_R06C01_Grn.idat 13676216 IDAT Green 8efb1d21-214c-495d-a868-29fc3ec955ad 195a48d2b626c9f9d995205797d9324e NA Primary Tumor C3L-00640-01,C3L-00640-03 C3L-00640.MethArray.Red.A C3L-00640 PDA Methylation Array tissue_normal CPT0064570009 203561450048_R03C01_Red.idat 13676221 IDAT Red 8687f994-2caa-4f29-9195-7a4ad451dc7f 7957d50701953db661c30c9d8370cfec NA Solid Tissue Normal C3L-00640-06 @@ -3940,23 +3664,6 @@ C3L-00640.WXS.T C3L-00640 PDA WXS tumor CPT0064520010 CPT0064520010.WholeExome.R C3L-00640.WXS.T.hg38 C3L-00640 PDA WXS tumor CPT0064520010 2998d128-cf02-44f9-a832-ee94ce2d4d56_gdc_realn.bam 34321665174 BAM NA cf2f53d0-1e24-43ff-a364-5b81c2ce1bd2 4ed2da5e9946939cdfc836e1d7503397 hg38 Primary Tumor C3L-00640-01,C3L-00640-03 C3L-00640.WXS.T.hg38.high_cov C3L-00640 PDA WXS tumor CPT0064520010_1 9fbe723b-720d-444d-9bec-9a75c2f4022d_wxs_gdc_realn.bam 70016410810 BAM NA bc0b29fb-cfaa-4edf-b9ef-b4534bfee27b de0fe95deeacea2d802db4114ee98986 hg38 Primary Tumor C3L-00640-01 local_meta=.high_cov C3L-00640.WXS.T.high_cov C3L-00640 PDA WXS tumor CPT0064520010_1 CPT0064520010_1.WholeExome.RP-1303.bam 50680026522 BAM NA 21f10009-3430-41e7-965b-2b923c5d1484 095cf8a927e3988fe9f3635f74b3dc03 hg19 Primary Tumor C3L-00640-01 local_meta=.high_cov -C3L-00671.MethArray.Green.T C3L-00671 GBM Methylation Array tumor CPT0064450010 202163550072_R04C01_Grn.idat 13676236 IDAT Green b67d9857-cd51-4422-8429-f35c8288ae83 8ed2a9c51e66213f6f1214e9c98374ce NA Primary Tumor C3L-00671-02,C3L-00671-03 -C3L-00671.MethArray.Red.T C3L-00671 GBM Methylation Array tumor CPT0064450010 202163550072_R04C01_Red.idat 13676236 IDAT Red a3d5fa26-98a5-4a98-8966-b9daa6571a75 43e09a9a8069f7d6112e764b01abdef5 NA Primary Tumor C3L-00671-02,C3L-00671-03 -C3L-00671.miRNA-Seq.T C3L-00671 GBM miRNA-Seq tumor CPT0064450007 181108_UNC31-K00269_0163_BH23TVBBXY_TGACCA_S4_L001_R1_001.unaln.bam 212390119 BAM NA 399e1b57-9879-44e6-a54c-0a5a762908d3 cea2a548bb563b6893a432a9afbfa5e2 NA Primary Tumor C3L-00671-02,C3L-00671-03 -C3L-00671.miRNA-Seq.T.hg38 C3L-00671 GBM miRNA-Seq tumor CPT0064450007 72a55a41-653a-4d06-b7eb-9a719a1e95ea_mirnaseq_gdc_realn.bam 234616373 BAM NA f3bf2f8a-15ae-4871-b5ad-4f7f14a527dc c31a711404799cd355cbca7608d86031 hg38 Primary Tumor C3L-00671-02,C3L-00671-03 -C3L-00671.RNA-Seq.chimeric.T.hg38 C3L-00671 GBM RNA-Seq tumor CPT0064450007 57f4476e-a918-474a-a7f3-13ffc4411f73.rna_seq.chimeric.gdc_realn.bam 94986655 BAM chimeric c3045cd6-a628-4732-97d9-34e746f0b83b b36a03f2d63df03998a28f91b212dc11 hg38 Primary Tumor C3L-00671-02,C3L-00671-03 -C3L-00671.RNA-Seq.genomic.T.hg38 C3L-00671 GBM RNA-Seq tumor CPT0064450007 57f4476e-a918-474a-a7f3-13ffc4411f73.rna_seq.genomic.gdc_realn.bam 8864477519 BAM genomic c83c02ab-0c88-4e97-ad56-df5ea4f84e14 f1926438d8927d31f1f1ec6194966c41 hg38 Primary Tumor C3L-00671-02,C3L-00671-03 -C3L-00671.RNA-Seq.R1.T C3L-00671 GBM RNA-Seq tumor CPT0064450007 170823_UNC31-K00269_0076_BHLCTFBBXX_TAGCTT_S10_L003_R1_001.fastq.gz 4172993945 FASTQ NA 2756606c-5c75-49f9-95d2-6d016582c20b dbadbfd38f729a1b5e22fec03c75695e NA Primary Tumor C3L-00671-02,C3L-00671-03 -C3L-00671.RNA-Seq.R2.T C3L-00671 GBM RNA-Seq tumor CPT0064450007 170823_UNC31-K00269_0076_BHLCTFBBXX_TAGCTT_S10_L003_R2_001.fastq.gz 4484440615 FASTQ NA a27bde88-b3d1-436b-ac01-0887eab16663 e31be052619702d8fd94a72c91058f9a NA Primary Tumor C3L-00671-02,C3L-00671-03 -C3L-00671.RNA-Seq.transcriptome.T.hg38 C3L-00671 GBM RNA-Seq tumor CPT0064450007 57f4476e-a918-474a-a7f3-13ffc4411f73.rna_seq.transcriptome.gdc_realn.bam 9544598564 BAM transcriptome 6c8eafbf-d054-4334-a61a-630dca997fd5 b1937874bce815a5b75d270466febb88 hg38 Primary Tumor C3L-00671-02,C3L-00671-03 -C3L-00671.WGS.N C3L-00671 GBM WGS blood_normal CPT0066650002 CPT0066650002.WholeGenome.RP-1303.bam 74977824124 BAM NA 925c59a1-8604-4958-a005-0ef88faf84ad 88388d37b63bbd5a064383ba3a574797 hg19 Blood Derived Normal C3L-00671-31 -C3L-00671.WGS.N.hg38 C3L-00671 GBM WGS blood_normal CPT0066650002 48fc7b46-f9a5-4936-9ac5-d76e81657ec8_gdc_realn.bam 112723889609 BAM NA ead64768-7a50-4e91-99ac-cbd78dd958d4 b54640315914936d6564bc7c5b7f02a5 hg38 Blood Derived Normal C3L-00671-31 -C3L-00671.WGS.T C3L-00671 GBM WGS tumor CPT0064450010 CPT0064450010.WholeGenome.RP-1303.bam 72134336559 BAM NA 4b13b4b4-a1c9-4dbe-8f5e-98a5e547c1b5 31983b69eef659672e49153784373892 hg19 Primary Tumor C3L-00671-02,C3L-00671-03 -C3L-00671.WGS.T.hg38 C3L-00671 GBM WGS tumor CPT0064450010 25b38c04-0a7f-482a-a715-80d9551c4fed_gdc_realn.bam 109615517898 BAM NA b5f076bd-526b-443f-8cd7-06b7e4c622b8 87db8e3d812b83153bd423e42f371a9b hg38 Primary Tumor C3L-00671-02,C3L-00671-03 -C3L-00671.WXS.N C3L-00671 GBM WXS blood_normal CPT0066650002 CPT0066650002.WholeExome.RP-1303.bam 30090519772 BAM NA 87c14d73-1425-417f-ae43-1e5d0e82092c 5e6977e82f649b5dcc10a80a681f87fa hg19 Blood Derived Normal C3L-00671-31 -C3L-00671.WXS.N.hg38 C3L-00671 GBM WXS blood_normal CPT0066650002 48fc7b46-f9a5-4936-9ac5-d76e81657ec8_gdc_realn.bam 41728424336 BAM NA b2cba24d-d903-44e8-9747-2de376af6774 9ec67e13d0809984c454a0a83aad9ec6 hg38 Blood Derived Normal C3L-00671-31 -C3L-00671.WXS.T C3L-00671 GBM WXS tumor CPT0064450010 CPT0064450010.WholeExome.RP-1303.bam 37068657907 BAM NA 1bb9f3b3-5163-4f3f-8bfe-a053e1878b17 837176b883adfac4583baff5eb41cca2 hg19 Primary Tumor C3L-00671-02,C3L-00671-03 -C3L-00671.WXS.T.hg38 C3L-00671 GBM WXS tumor CPT0064450010 25b38c04-0a7f-482a-a715-80d9551c4fed_gdc_realn.bam 51400863199 BAM NA 1a2f9fdf-5bec-4908-9ad0-795f1bc2de75 6568bb533407f43f1acd9baf904ccf99 hg38 Primary Tumor C3L-00671-02,C3L-00671-03 C3L-00674.MethArray.Green.T C3L-00674 GBM Methylation Array tumor CPT0064650009 202178770143_R04C01_Grn.idat 13676242 IDAT Green c662fdd1-56ac-44e1-a5a3-a39762630667 4c638ba9f951a47576eb80a9ab8ce5ed NA Primary Tumor C3L-00674-71 C3L-00674.MethArray.Red.T C3L-00674 GBM Methylation Array tumor CPT0064650009 202178770143_R04C01_Red.idat 13676242 IDAT Red ed051d00-7903-4c3e-8b7a-62f9481737b4 e5c8d285781de5f0e345c988155863a7 NA Primary Tumor C3L-00674-71 C3L-00674.miRNA-Seq.T C3L-00674 GBM miRNA-Seq tumor CPT0064650006 181113_UNC31-K00269_0164_AH23NNBBXY_TACAGC_S19_L001_R1_001.unaln.bam 190407441 BAM NA 871bc308-0400-45f3-8938-afca148bc753 668e27b4ab24f296cdf907fd31127615 NA Primary Tumor C3L-00674-71 @@ -4130,8 +3837,8 @@ C3L-00780.WXS.N C3L-00780 UCEC WXS blood_normal CPT0071010002 CPT0071010002.Whol C3L-00780.WXS.N.hg38 C3L-00780 UCEC WXS blood_normal CPT0071010002 5b8ab142-f4da-4643-8c68-db13cfd072b2_gdc_realn.bam 51120636409 BAM NA c715d91e-8c73-4dfb-8bc8-7b40b85a66c3 d6311e13b52698d6014d23fff8c3be26 hg38 Blood Derived Normal C3L-00780-31 C3L-00780.WXS.T C3L-00780 UCEC WXS tumor CPT0070330010 CPT0070330010.WholeExome.RP-1303.bam 23482556781 BAM NA 14bde12d-beb9-43d7-be78-44127b3e34f8 ed8d9fe2316fe3826a060d8698a42adf hg19 Primary Tumor C3L-00780-03,C3L-00780-05 C3L-00780.WXS.T.hg38 C3L-00780 UCEC WXS tumor CPT0070330010 112790c0-190c-469d-9a8f-27abdcd1bea6_gdc_realn.bam 32744912561 BAM NA 6ac5dcc3-1579-4f8f-9974-8183e970c433 1e69bace9d35af952147dedec865ed88 hg38 Primary Tumor C3L-00780-03,C3L-00780-05 -C3L-00781.MethArray.Green.T C3L-00781 UCEC Methylation Array tumor CPT0070260009 202176290047_R04C01_Grn.idat 13676226 IDAT Green 290a9e3a-67ab-4851-a507-94570aa3439c bac3e6a864770902817d1e10216a89d3 NA Primary Tumor C3L-00781-04 -C3L-00781.MethArray.Red.T C3L-00781 UCEC Methylation Array tumor CPT0070260009 202176290047_R04C01_Red.idat 13676226 IDAT Red efa8dd50-9837-49e3-b6b7-d9034df3e4d8 6061482db63f53c7240b88d965a29ac6 NA Primary Tumor C3L-00781-04 +C3L-00781.MethArray.Green.T.UNK_r53AVp C3L-00781 UCEC Methylation Array tumor CPT0070260009 202176290047_R04C01_Grn.idat 13676226 IDAT Green 290a9e3a-67ab-4851-a507-94570aa3439c bac3e6a864770902817d1e10216a89d3 NA Primary Tumor C3L-00781-04 sample_tag=UNK_r53AVp The WGS data for this aliquot failed the GDC harmonization pipeline. +C3L-00781.MethArray.Red.T.UNK_r53AVp C3L-00781 UCEC Methylation Array tumor CPT0070260009 202176290047_R04C01_Red.idat 13676226 IDAT Red efa8dd50-9837-49e3-b6b7-d9034df3e4d8 6061482db63f53c7240b88d965a29ac6 NA Primary Tumor C3L-00781-04 sample_tag=UNK_r53AVp The WGS data for this aliquot failed the GDC harmonization pipeline. C3L-00781.miRNA-Seq.T C3L-00781 UCEC miRNA-Seq tumor CPT0070260006 181108_UNC31-K00269_0163_BH23TVBBXY_AGTTCC_S14_L001_R1_001.unaln.bam 212368435 BAM NA 9b016aeb-1877-4ca3-a4ef-13453361ce14 73410e463b6adff27b41f4db9a103c37 NA Primary Tumor C3L-00781-04 C3L-00781.miRNA-Seq.T.hg38 C3L-00781 UCEC miRNA-Seq tumor CPT0070260006 16c70fb3-9961-4d76-b7de-ddcab4904e92_mirnaseq_gdc_realn.bam 240387591 BAM NA 5a2e27da-e780-473a-bfa3-a19d506257b5 bf5aaaa444700fdbc18e89152762acf5 hg38 Primary Tumor C3L-00781-04 C3L-00781.RNA-Seq.chimeric.T.hg38 C3L-00781 UCEC RNA-Seq tumor CPT0070260006 6f749d26-5008-4c14-b761-2d5362224a9c.rna_seq.chimeric.gdc_realn.bam 28195554 BAM chimeric 745e57a9-b464-416e-acc8-e9b34f788f1b 5c3d64d2fcfc001182522644a4ebefd2 hg38 Primary Tumor C3L-00781-04 @@ -4144,14 +3851,14 @@ C3L-00781.RNA-Seq.R2.T C3L-00781 UCEC RNA-Seq tumor CPT0070260006 170830_UNC31-K C3L-00781.RNA-Seq.R2.T C3L-00781 UCEC RNA-Seq tumor CPT0070560001 20210723_P2_G6_WB7988-plate2_S78_R2_001.fastq.gz 7669099669 FASTQ NA f85377c2-8c07-46f7-aa32-f185e85b2027 1f606dea998b03b79b4a97c4742c18c9 NA Primary Tumor C3L-00781-14 C3L-00781.RNA-Seq.transcriptome.T.hg38 C3L-00781 UCEC RNA-Seq tumor CPT0070260006 6f749d26-5008-4c14-b761-2d5362224a9c.rna_seq.transcriptome.gdc_realn.bam 9858641230 BAM transcriptome 4502652f-9bcb-451f-a175-c6006ca2967e 3effbe59924585f0272a70f99237a8e7 hg38 Primary Tumor C3L-00781-04 C3L-00781.RNA-Seq.transcriptome.T.hg38 C3L-00781 UCEC RNA-Seq tumor CPT0070560001 746a7795-5408-4d8a-b323-28b7eebbb08c.rna_seq.transcriptome.gdc_realn.bam 8486219451 BAM transcriptome bb4f39ca-6a9b-487a-8450-814abb7b8d66 ac5aab64d25fd7ae36b6d0fb502cfcc1 hg38 Primary Tumor C3L-00781-14 -C3L-00781.WGS.N C3L-00781 UCEC WGS blood_normal CPT0071030002 CPT0071030002.WholeGenome.RP-1303.bam 76522999929 BAM NA 327fb993-6554-45a4-b193-65d43fb3c42b d8d4ce4472f11aedcf72cbe65bda3e09 hg19 Blood Derived Normal C3L-00781-31 -C3L-00781.WGS.N.hg38 C3L-00781 UCEC WGS blood_normal CPT0071030002 f66e9c98-6bf9-401d-908e-6647373ab6ec_gdc_realn.bam 114863684048 BAM NA a0b19c7e-733f-460c-969d-2e6954549afb 138fea9a86f7a09a7d0818998c45ef0e hg38 Blood Derived Normal C3L-00781-31 -C3L-00781.WGS.T C3L-00781 UCEC WGS tumor CPT0070260009 CPT0070260009.WholeGenome.RP-1303.bam 61713544130 BAM NA cfbec75e-6ba8-4141-8613-097815a13b49 e08bcaf607f5c15c4f2e535c068c05e0 hg19 Primary Tumor C3L-00781-04 -C3L-00781.WGS.T.hg38 C3L-00781 UCEC WGS tumor CPT0070260009 10716ab4-7a85-4ad5-a1e0-ff7e1339aa0a_gdc_realn.bam 92149718911 BAM NA c118fa04-a798-4523-b02f-4f292c61f47c 4954cfebbd8b817346d9fca56236cb88 hg38 Primary Tumor C3L-00781-04 -C3L-00781.WXS.N C3L-00781 UCEC WXS blood_normal CPT0071030002 CPT0071030002.WholeExome.RP-1303.bam 35606198342 BAM NA c0d845c2-393e-4b9e-b34a-4e3b1bb166a3 87f6e19d503bfc8445c8fbbf32cca879 hg19 Blood Derived Normal C3L-00781-31 -C3L-00781.WXS.N.hg38 C3L-00781 UCEC WXS blood_normal CPT0071030002 f66e9c98-6bf9-401d-908e-6647373ab6ec_gdc_realn.bam 49744809841 BAM NA 337eceaf-f9ad-4aca-8ba6-501faf696188 95ca0fe960a07000aaf65d2f4ea3c3ac hg38 Blood Derived Normal C3L-00781-31 -C3L-00781.WXS.T C3L-00781 UCEC WXS tumor CPT0070260009 CPT0070260009.WholeExome.RP-1303.bam 30859526265 BAM NA 3aafa910-9eeb-40ce-8373-8188414d1c9f 401abe17effc62381695e6c55d9b43a8 hg19 Primary Tumor C3L-00781-04 -C3L-00781.WXS.T.hg38 C3L-00781 UCEC WXS tumor CPT0070260009 10716ab4-7a85-4ad5-a1e0-ff7e1339aa0a_gdc_realn.bam 41882383613 BAM NA 44dc38c6-1db6-4fe2-9a78-154b71409bbd e246dd6f27d7abc6f038b174d37d83cb hg38 Primary Tumor C3L-00781-04 +C3L-00781.WGS.N.UNK_kKzA56 C3L-00781 UCEC WGS blood_normal CPT0071030002 CPT0071030002.WholeGenome.RP-1303.bam 76522999929 BAM NA 327fb993-6554-45a4-b193-65d43fb3c42b d8d4ce4472f11aedcf72cbe65bda3e09 hg19 Blood Derived Normal C3L-00781-31 sample_tag=UNK_kKzA56 The WGS data for this aliquot failed the GDC harmonization pipeline. +C3L-00781.WGS.N.UNK_kKzA56.hg38 C3L-00781 UCEC WGS blood_normal CPT0071030002 f66e9c98-6bf9-401d-908e-6647373ab6ec_gdc_realn.bam 114863684048 BAM NA a0b19c7e-733f-460c-969d-2e6954549afb 138fea9a86f7a09a7d0818998c45ef0e hg38 Blood Derived Normal C3L-00781-31 sample_tag=UNK_kKzA56 The WGS data for this aliquot failed the GDC harmonization pipeline. +C3L-00781.WGS.T.UNK_r53AVp C3L-00781 UCEC WGS tumor CPT0070260009 CPT0070260009.WholeGenome.RP-1303.bam 61713544130 BAM NA cfbec75e-6ba8-4141-8613-097815a13b49 e08bcaf607f5c15c4f2e535c068c05e0 hg19 Primary Tumor C3L-00781-04 sample_tag=UNK_r53AVp The WGS data for this aliquot failed the GDC harmonization pipeline. +C3L-00781.WGS.T.UNK_r53AVp.hg38 C3L-00781 UCEC WGS tumor CPT0070260009 10716ab4-7a85-4ad5-a1e0-ff7e1339aa0a_gdc_realn.bam 92149718911 BAM NA c118fa04-a798-4523-b02f-4f292c61f47c 4954cfebbd8b817346d9fca56236cb88 hg38 Primary Tumor C3L-00781-04 sample_tag=UNK_r53AVp The WGS data for this aliquot failed the GDC harmonization pipeline. +C3L-00781.WXS.N.UNK_kKzA56 C3L-00781 UCEC WXS blood_normal CPT0071030002 CPT0071030002.WholeExome.RP-1303.bam 35606198342 BAM NA c0d845c2-393e-4b9e-b34a-4e3b1bb166a3 87f6e19d503bfc8445c8fbbf32cca879 hg19 Blood Derived Normal C3L-00781-31 sample_tag=UNK_kKzA56 The WGS data for this aliquot failed the GDC harmonization pipeline. +C3L-00781.WXS.N.UNK_kKzA56.hg38 C3L-00781 UCEC WXS blood_normal CPT0071030002 f66e9c98-6bf9-401d-908e-6647373ab6ec_gdc_realn.bam 49744809841 BAM NA 337eceaf-f9ad-4aca-8ba6-501faf696188 95ca0fe960a07000aaf65d2f4ea3c3ac hg38 Blood Derived Normal C3L-00781-31 sample_tag=UNK_kKzA56 The WGS data for this aliquot failed the GDC harmonization pipeline. +C3L-00781.WXS.T.UNK_r53AVp C3L-00781 UCEC WXS tumor CPT0070260009 CPT0070260009.WholeExome.RP-1303.bam 30859526265 BAM NA 3aafa910-9eeb-40ce-8373-8188414d1c9f 401abe17effc62381695e6c55d9b43a8 hg19 Primary Tumor C3L-00781-04 sample_tag=UNK_r53AVp The WGS data for this aliquot failed the GDC harmonization pipeline. +C3L-00781.WXS.T.UNK_r53AVp.hg38 C3L-00781 UCEC WXS tumor CPT0070260009 10716ab4-7a85-4ad5-a1e0-ff7e1339aa0a_gdc_realn.bam 41882383613 BAM NA 44dc38c6-1db6-4fe2-9a78-154b71409bbd e246dd6f27d7abc6f038b174d37d83cb hg38 Primary Tumor C3L-00781-04 sample_tag=UNK_r53AVp The WGS data for this aliquot failed the GDC harmonization pipeline. C3L-00789.MethArray.Green.T C3L-00789 CCRCC Methylation Array tumor CPT0016030017 202184900127_R08C01_Grn.idat 13676248 IDAT Green cdf5b3c0-a599-4935-81e4-85c6e523e503 0eaff6d33ea8094057a10a37dd5283b6 NA Primary Tumor C3L-00789-01 C3L-00789.MethArray.Red.T C3L-00789 CCRCC Methylation Array tumor CPT0016030017 202184900127_R08C01_Red.idat 13676248 IDAT Red 57aeddb4-886d-4b50-a400-6398e0fa5852 ddfed4fb7bf9dc0cdd154f49d24f3367 NA Primary Tumor C3L-00789-01 C3L-00789.miRNA-Seq.T C3L-00789 CCRCC miRNA-Seq tumor CPT0016030014 180924_UNC31-K00269_0154_AHWTMLBBXX_TCGAAG_S25_L002_R1_001.unaln.bam 261982729 BAM NA d8ba475d-0704-4194-b079-f8f4ea57bfaf 1378c6ac9fd93aaa7aa0665702f7ac08 NA Primary Tumor C3L-00789-01 @@ -4488,25 +4195,6 @@ C3L-00881.WXS.T C3L-00881 PDA WXS tumor CPT0017040007 CPT0017040007.WholeExome.R C3L-00881.WXS.T.hg38 C3L-00881 PDA WXS tumor CPT0017040007 6b6491db-c497-45a7-b98d-f4d43f89435c_gdc_realn.bam 53942362364 BAM NA 4bf075b8-1f5f-4305-8429-15c3ea760aa6 92f645883bc275509b2792a7e0301595 hg38 Primary Tumor C3L-00881-71,C3L-00881-73 C3L-00881.WXS.T.hg38.high_cov C3L-00881 PDA WXS tumor CPT0017040007_1 91520624-6be3-4d93-9269-6fce7a30d3c5_wxs_gdc_realn.bam 95750084176 BAM NA cb6b8621-e1dc-40f0-85f0-893dc8b58c2c a1dad0e9d94b6ade0936e1264acbc25b hg38 Primary Tumor C3L-00881-73 local_meta=.high_cov C3L-00881.WXS.T.high_cov C3L-00881 PDA WXS tumor CPT0017040007_1 CPT0017040007_1.WholeExome.RP-1303.bam 69347372832 BAM NA d4e52e9c-2fc8-45d3-8644-d3d90924dfd8 a715ca63fef161276560c4523bf90f4b hg19 Primary Tumor C3L-00881-73 local_meta=.high_cov -C3L-00885.MethArray.Green.T C3L-00885 PDA Methylation Array tumor CPT0064720010 202184900104_R04C01_Grn.idat 13676256 IDAT Green 7b5a4cfe-3875-45d7-8632-9b3391cd9389 8f1de87ec398794038ae9df6228089f5 NA Primary Tumor C3L-00885-72,C3L-00885-73 -C3L-00885.MethArray.Red.T C3L-00885 PDA Methylation Array tumor CPT0064720010 202184900104_R04C01_Red.idat 13676256 IDAT Red 83349bd6-5a59-493c-9048-e593015ebb15 6a2ea1545682b2df33347eb8b10b7921 NA Primary Tumor C3L-00885-72,C3L-00885-73 -C3L-00885.miRNA-Seq.T C3L-00885 PDA miRNA-Seq tumor CPT0064720007 181108_UNC31-K00269_0163_BH23TVBBXY_ATGTCA_S15_L001_R1_001.unaln.bam 246438084 BAM NA abc2d05b-8c01-49be-bbf0-711c6318eb61 a5a9202330906a6b5780fc1e0cf2a29b NA Primary Tumor C3L-00885-72,C3L-00885-73 -C3L-00885.miRNA-Seq.T.hg38 C3L-00885 PDA miRNA-Seq tumor CPT0064720007 dbb49abe-c651-419b-8df2-19bc9609c21c_mirnaseq_gdc_realn.bam 270064748 BAM NA 6f3b209e-f4d2-4801-8c96-73266c57397a 63c67826baeb2deac52a9cef7ecd60af hg38 Primary Tumor C3L-00885-72,C3L-00885-73 -C3L-00885.RNA-Seq.chimeric.T.hg38 C3L-00885 PDA RNA-Seq tumor CPT0064720007 ad7bd7bb-a4d8-419f-ab6e-ed6e23dedb51.rna_seq.chimeric.gdc_realn.bam 29607524 BAM chimeric 6f8b5f9f-7779-4143-8a4e-bc760559886b 2e656617207f72916f3f7fb1d349587c hg38 Primary Tumor C3L-00885-72,C3L-00885-73 -C3L-00885.RNA-Seq.genomic.T.hg38 C3L-00885 PDA RNA-Seq tumor CPT0064720007 ad7bd7bb-a4d8-419f-ab6e-ed6e23dedb51.rna_seq.genomic.gdc_realn.bam 8448476141 BAM genomic 86f19d86-4cd6-4a50-9019-1e805f4e1b45 d589065282da2b0db8e3a6aec92a824b hg38 Primary Tumor C3L-00885-72,C3L-00885-73 -C3L-00885.RNA-Seq.R1.T C3L-00885 PDA RNA-Seq tumor CPT0064720007 170830_UNC31-K00269_0078_AHLCVMBBXX_ACTGAT_S10_L003_R1_001.fastq.gz 4089473425 FASTQ NA 53c1e06a-8602-4a75-934c-c08b309cf189 3bec29bf77773fb31b9e8a398eed8fb3 NA Primary Tumor C3L-00885-72,C3L-00885-73 -C3L-00885.RNA-Seq.R2.T C3L-00885 PDA RNA-Seq tumor CPT0064720007 170830_UNC31-K00269_0078_AHLCVMBBXX_ACTGAT_S10_L003_R2_001.fastq.gz 4338399311 FASTQ NA b232ae8e-de8d-4846-96d6-e62606971408 754be7379ca59c530ae7aba4c33a0838 NA Primary Tumor C3L-00885-72,C3L-00885-73 -C3L-00885.RNA-Seq.transcriptome.T.hg38 C3L-00885 PDA RNA-Seq tumor CPT0064720007 ad7bd7bb-a4d8-419f-ab6e-ed6e23dedb51.rna_seq.transcriptome.gdc_realn.bam 11254935820 BAM transcriptome 536f4528-1827-49fd-9659-ba42bab808f3 a41b146a60ab9e4d003cbf7ff5fc0061 hg38 Primary Tumor C3L-00885-72,C3L-00885-73 -C3L-00885.Targeted.T C3L-00885 PDA Targeted Sequencing tumor CPT0064720010 CPT0064720010.CustomSelection.RP-1303.PDO-18786.bam 4970271541 BAM NA 54c80f64-c223-414d-9309-2261c4a7b2c9 1167b3f1d007d783b5410fa89af7c3d5 hg19 Primary Tumor C3L-00885-72,C3L-00885-73 -C3L-00885.Targeted.T.hg38 C3L-00885 PDA Targeted Sequencing tumor CPT0064720010 d98f794d-a36a-4c2b-8f82-9d4302f04e06_targetedsequencing_gdc_realn.bam 6824881507 BAM NA 7f53aa4a-3792-40fe-bb64-31a614e52214 85359de51960c058d716b68c3f202e00 hg38 Primary Tumor C3L-00885-72,C3L-00885-73 -C3L-00885.WGS.N C3L-00885 PDA WGS blood_normal CPT0066680002 CPT0066680002.WholeGenome.RP-1303.bam 67598193267 BAM NA 958b74e7-04be-4dc2-9689-2c2d98e0f9ae ab0d6c785707c0ebcbf90b602c0e191b hg19 Blood Derived Normal C3L-00885-31 -C3L-00885.WGS.N.hg38 C3L-00885 PDA WGS blood_normal CPT0066680002 c4554194-baa1-4066-873c-35857b4e0ea2_gdc_realn.bam 101932298248 BAM NA 4367cd4c-2608-4c7a-9920-0e76cfdae6ff ca068e91e9a43688a10b59e576630952 hg38 Blood Derived Normal C3L-00885-31 -C3L-00885.WGS.T C3L-00885 PDA WGS tumor CPT0064720010 CPT0064720010.WholeGenome.RP-1303.bam 79191068806 BAM NA 797a3861-246b-4a69-a7a3-55b50889d78e 4402696cd3721fd5bbf26232d1244779 hg19 Primary Tumor C3L-00885-72,C3L-00885-73 -C3L-00885.WGS.T.hg38 C3L-00885 PDA WGS tumor CPT0064720010 d98f794d-a36a-4c2b-8f82-9d4302f04e06_gdc_realn.bam 120780714839 BAM NA a7d0b970-0de7-4ae8-bdaf-ec02df73a0e6 879cf3610d1c20156814395269354d1e hg38 Primary Tumor C3L-00885-72,C3L-00885-73 -C3L-00885.WXS.N C3L-00885 PDA WXS blood_normal CPT0066680002 CPT0066680002.WholeExome.RP-1303.bam 39256883988 BAM NA a1cda1a7-dc47-4c12-80d8-a4012a57bccd b92cc8d03b210faf8e64d888e4d88bc5 hg19 Blood Derived Normal C3L-00885-31 -C3L-00885.WXS.N.hg38 C3L-00885 PDA WXS blood_normal CPT0066680002 c4554194-baa1-4066-873c-35857b4e0ea2_gdc_realn.bam 54459191737 BAM NA 734862fe-d0eb-4568-8887-6f00640aae4c 69f68a922e4f818a285064a13a2e0b97 hg38 Blood Derived Normal C3L-00885-31 -C3L-00885.WXS.T C3L-00885 PDA WXS tumor CPT0064720010 CPT0064720010.WholeExome.RP-1303.bam 30700834051 BAM NA 771ce00a-425d-4a4b-af3a-c00db19b1d2d 52215252dfddadce4bb23db5e276110a hg19 Primary Tumor C3L-00885-72,C3L-00885-73 -C3L-00885.WXS.T.hg38 C3L-00885 PDA WXS tumor CPT0064720010 d98f794d-a36a-4c2b-8f82-9d4302f04e06_gdc_realn.bam 42519686474 BAM NA e0ccd78a-5362-41d4-bfc0-b48ff9c492a5 b4248fc3200fc1634458828c217f45c6 hg38 Primary Tumor C3L-00885-72,C3L-00885-73 C3L-00893.MethArray.Green.A C3L-00893 LUAD Methylation Array tissue_normal CPT0083140009 203027390113_R08C01_Grn.idat 13676246 IDAT Green b44d61f3-1864-486b-ae1c-967b537b6cec 11299e503800511a38688ff15d410ee1 NA Solid Tissue Normal C3L-00893-06 C3L-00893.MethArray.Green.T C3L-00893 LUAD Methylation Array tumor CPT0083100009 202184990069_R03C01_Grn.idat 13676226 IDAT Green c2383c0b-9458-44ab-ae9e-a2e0d6bbd425 404e9093d99dcb9e31094e1cfc10d759 NA Primary Tumor C3L-00893-02 C3L-00893.MethArray.Red.A C3L-00893 LUAD Methylation Array tissue_normal CPT0083140009 203027390113_R08C01_Red.idat 13676246 IDAT Red e2d50619-fbf6-4966-b505-d40adca18ffb a7299a1b9697b607788c045a77453e1c NA Solid Tissue Normal C3L-00893-06 @@ -4956,23 +4644,6 @@ C3L-00928.WXS.T C3L-00928 PDA WXS tumor CPT0063570009 CPT0063570009.WholeExome.R C3L-00928.WXS.T.hg38 C3L-00928 PDA WXS tumor CPT0063570009 0b9a91bc-a425-4324-94f9-a5b3bb4078a6_gdc_realn.bam 48971675541 BAM NA 4b6f2f9b-f555-4a4e-92be-24f26bbe98ee 22377c27070a58f6792e97ca9ac406de hg38 Primary Tumor C3L-00928-03 C3L-00928.WXS.T.hg38.high_cov C3L-00928 PDA WXS tumor CPT0063570009_1 bd1adbbd-9936-40c2-8a9e-83f1b1078106_wxs_gdc_realn.bam 88118093845 BAM NA c4e455fe-3215-4d18-bd8a-16787b11fc04 d8f07fead4f61714dc8ada5064a5fae5 hg38 Primary Tumor C3L-00928-03 local_meta=.high_cov C3L-00928.WXS.T.high_cov C3L-00928 PDA WXS tumor CPT0063570009_1 CPT0063570009_1.WholeExome.RP-1303.bam 63574954251 BAM NA 1440e66f-6321-445d-9412-3f8ac0d35cff fa9de49173ee6b6453faa2ecacf6bde6 hg19 Primary Tumor C3L-00928-03 local_meta=.high_cov -C3L-00930.MethArray.Green.T C3L-00930 UCEC Methylation Array tumor CPT0027010009 202184990063_R03C01_Grn.idat 13676226 IDAT Green 8a3a7ec3-25b4-480b-970d-529427b63e1f f417f777284f8d9ecbb8eb7e53b83f2d NA Primary Tumor C3L-00930-01 -C3L-00930.MethArray.Red.T C3L-00930 UCEC Methylation Array tumor CPT0027010009 202184990063_R03C01_Red.idat 13676226 IDAT Red ad319c63-a1c7-43a7-aa92-9cbde29778aa c304fe8f22c60b2d1f3be32756817dca NA Primary Tumor C3L-00930-01 -C3L-00930.miRNA-Seq.T C3L-00930 UCEC miRNA-Seq tumor CPT0027010006 190828_UNC32-K00270_0200_BH7GVJBBXY_ATGAGC_S148_L007_R1_001.unaln.bam 264742907 BAM NA 1a4f3541-4a60-4df1-9541-051e2928fa9e 0d14bc25dd779504bc19d82da7887add NA Primary Tumor C3L-00930-01 -C3L-00930.miRNA-Seq.T.hg38 C3L-00930 UCEC miRNA-Seq tumor CPT0027010006 226a1ba5-1e36-4797-b566-396c3b631020_mirnaseq_gdc_realn.bam 306484725 BAM NA de75cafd-363a-4102-8ef2-2b900cf5bfa1 de9d91ee736c9c8635996ccefc3d4961 hg38 Primary Tumor C3L-00930-01 -C3L-00930.RNA-Seq.chimeric.T.hg38 C3L-00930 UCEC RNA-Seq tumor CPT0027010006 667adff8-9c3a-4e8c-a742-cea5ba422d29.rna_seq.chimeric.gdc_realn.bam 60681891 BAM chimeric aa8a4c08-543c-4774-9292-d50291388162 1c4854f6e7fabeab4a759c9dd4b3814f hg38 Primary Tumor C3L-00930-01 -C3L-00930.RNA-Seq.genomic.T.hg38 C3L-00930 UCEC RNA-Seq tumor CPT0027010006 667adff8-9c3a-4e8c-a742-cea5ba422d29.rna_seq.genomic.gdc_realn.bam 8441421981 BAM genomic 5b610db7-096f-41d8-845c-9d59ca95069c 60becbd5f46dae9fad14254ab235eac2 hg38 Primary Tumor C3L-00930-01 -C3L-00930.RNA-Seq.R1.T C3L-00930 UCEC RNA-Seq tumor CPT0027010006 170912_UNC31-K00269_0081_AHL3YKBBXX_GGCTAC_S12_L003_R1_001.fastq.gz 3772691344 FASTQ NA 752ef154-292d-4b3a-8dcf-37cf3498ecb8 83a78aeec081bd0a4864ff3b2b33233a NA Primary Tumor C3L-00930-01 -C3L-00930.RNA-Seq.R2.T C3L-00930 UCEC RNA-Seq tumor CPT0027010006 170912_UNC31-K00269_0081_AHL3YKBBXX_GGCTAC_S12_L003_R2_001.fastq.gz 4242501442 FASTQ NA 6f63b400-405c-4fa4-ae13-ec4166bc4d0f e620794c7799b32d6ac271738bbbed7c NA Primary Tumor C3L-00930-01 -C3L-00930.RNA-Seq.transcriptome.T.hg38 C3L-00930 UCEC RNA-Seq tumor CPT0027010006 667adff8-9c3a-4e8c-a742-cea5ba422d29.rna_seq.transcriptome.gdc_realn.bam 8992734092 BAM transcriptome 1e5448d8-97af-4495-b22b-26b57d4e5c5f a50226fc852959d27032ecf5ec83e876 hg38 Primary Tumor C3L-00930-01 -C3L-00930.WGS.N C3L-00930 UCEC WGS blood_normal CPT0027070002 CPT0027070002.WholeGenome.RP-1303.bam 59740846028 BAM NA d9cea9b7-6c63-4405-915d-8c62734f94df 572524d364da5e8829180a92faf85e3a hg19 Blood Derived Normal C3L-00930-71 -C3L-00930.WGS.N.hg38 C3L-00930 UCEC WGS blood_normal CPT0027070002 5708aec3-d858-4356-8fae-69eb52a5f8ce_gdc_realn.bam 85913008913 BAM NA 6eae4de5-f622-4da6-a903-277839115653 e6ed1a886cb4d5d5a70e88dee15c028e hg38 Blood Derived Normal C3L-00930-71 -C3L-00930.WGS.T C3L-00930 UCEC WGS tumor CPT0027010009 CPT0027010009.WholeGenome.RP-1303.bam 60954482757 BAM NA 968a7c8d-a097-4771-8ad8-4557c9007e00 65cc8e6d0b8d83544f40bbcfef77bc2c hg19 Primary Tumor C3L-00930-01 -C3L-00930.WGS.T.hg38 C3L-00930 UCEC WGS tumor CPT0027010009 e12a4da4-0cc5-46c9-9227-27c1e3599a72_gdc_realn.bam 89413919233 BAM NA 163f3412-edbb-4a88-904d-11214b91d6a4 a82ec5accdc92f6024efd6a0cf1605e1 hg38 Primary Tumor C3L-00930-01 -C3L-00930.WXS.N C3L-00930 UCEC WXS blood_normal CPT0027070002 CPT0027070002.WholeExome.RP-1303.bam 29342526187 BAM NA 18a1df8b-ce34-480b-83a7-6fc3a22f8546 1b32d0d6fa1ec00286e3ebd89c03b82b hg19 Blood Derived Normal C3L-00930-71 -C3L-00930.WXS.N.hg38 C3L-00930 UCEC WXS blood_normal CPT0027070002 5708aec3-d858-4356-8fae-69eb52a5f8ce_gdc_realn.bam 40468795605 BAM NA f58fee35-dc05-4378-8f93-00dbadb7c373 29d3bb1bad6f013f5189d9a063554539 hg38 Blood Derived Normal C3L-00930-71 -C3L-00930.WXS.T C3L-00930 UCEC WXS tumor CPT0027010009 CPT0027010009.WholeExome.RP-1303.bam 25198592558 BAM NA b0c1a0a2-a489-4b90-9151-a1aba063cb9f 997a407491c3ebbe021aacab6e22bdae hg19 Primary Tumor C3L-00930-01 -C3L-00930.WXS.T.hg38 C3L-00930 UCEC WXS tumor CPT0027010009 e12a4da4-0cc5-46c9-9227-27c1e3599a72_gdc_realn.bam 34383425082 BAM NA d42ea0e1-37e8-4e5a-8bc3-fa6330c8142d 7b87e0a3686069007a128efd19637e49 hg38 Primary Tumor C3L-00930-01 C3L-00932.MethArray.Green.T C3L-00932 UCEC Methylation Array tumor CPT0027120009 202178770079_R03C01_Grn.idat 13676241 IDAT Green d6b0ac87-a0f4-4a64-9827-b3df7f28959d 3b3f15088d4f4891aab80c1568710f49 NA Primary Tumor C3L-00932-01 C3L-00932.MethArray.Red.T C3L-00932 UCEC Methylation Array tumor CPT0027120009 202178770079_R03C01_Red.idat 13676241 IDAT Red 2c844208-f405-42f2-b1cd-aca9f9b6009a 0155c001b902490b6cbaaa9276fb2d1b NA Primary Tumor C3L-00932-01 C3L-00932.miRNA-Seq.A C3L-00932 UCEC miRNA-Seq tissue_normal CPT0027130006 181108_UNC31-K00269_0162_AH255GBBXY_CAGGCG_S9_L006_R1_001.unaln.bam 242042636 BAM NA d067ea26-6f5b-4756-9be0-1b648d1b8067 d192559a1eaa876d963ab9095b59ef8d NA Solid Tissue Normal C3L-00932-02 @@ -5006,34 +4677,6 @@ C3L-00932.WXS.N C3L-00932 UCEC WXS blood_normal CPT0027180002 CPT0027180002.Whol C3L-00932.WXS.N.hg38 C3L-00932 UCEC WXS blood_normal CPT0027180002 2b46f8aa-89b0-472b-969d-2ddd7b6266a5_gdc_realn.bam 38893377530 BAM NA 727b0893-cc84-4b7e-b139-ea00f0a60d42 29c5f88374140222b72f878b0d1a584b hg38 Blood Derived Normal C3L-00932-31,C3L-00932-71 C3L-00932.WXS.T C3L-00932 UCEC WXS tumor CPT0027120009 CPT0027120009.WholeExome.RP-1303.bam 25374416872 BAM NA 3fb1df82-1f6e-4e56-84c2-3b56d905ac84 537a43a88c7f844fefe4a441e913ab84 hg19 Primary Tumor C3L-00932-01 C3L-00932.WXS.T.hg38 C3L-00932 UCEC WXS tumor CPT0027120009 6fea7283-a05f-4452-bcfc-4489af212782_gdc_realn.bam 34576735449 BAM NA 9dbeb6c5-ec18-4cda-b9a0-170ac1f547ac b249abf99c47051f686eface034a1c8e hg38 Primary Tumor C3L-00932-01 -C3L-00935.MethArray.Green.T C3L-00935 UCEC Methylation Array tumor CPT0027220009 202176300001_R05C01_Grn.idat 13676215 IDAT Green c723e2be-cd49-4960-841a-60560ec84d75 70accdf39dfce42d99f47c1764050143 NA Primary Tumor C3L-00935-01 -C3L-00935.MethArray.Red.T C3L-00935 UCEC Methylation Array tumor CPT0027220009 202176300001_R05C01_Red.idat 13676215 IDAT Red adc56683-80a0-45db-b006-2d0e3f56ca95 8caa09544b139ee4b5552c40748884f3 NA Primary Tumor C3L-00935-01 -C3L-00935.miRNA-Seq.A C3L-00935 UCEC miRNA-Seq tissue_normal CPT0027230006 181108_UNC31-K00269_0162_AH255GBBXY_CATGGC_S10_L006_R1_001.unaln.bam 241488742 BAM NA 5097e342-0851-4ad2-817e-56264e907d8f 6b22e4d3e9e7fa6add5b148eeb302cf5 NA Solid Tissue Normal C3L-00935-02 -C3L-00935.miRNA-Seq.A.hg38 C3L-00935 UCEC miRNA-Seq tissue_normal CPT0027230006 40621d44-4374-4778-9aa8-203addb3a8e2_mirnaseq_gdc_realn.bam 274888060 BAM NA fb800b1b-caca-4cd3-8feb-98b502c26e0f 73ab5aa9967e03859192a3810d907635 hg38 Solid Tissue Normal C3L-00935-02 -C3L-00935.miRNA-Seq.T C3L-00935 UCEC miRNA-Seq tumor CPT0027220013 181012_UNC32-K00270_0124_AH223CBBXY_CGATGT_S23_L004_R1_001.unaln.bam 262645305 BAM NA 4865126d-9932-47c4-9f21-11ec2e8d7755 e47bcca464bdeb93def8d3a09db8984f NA Primary Tumor C3L-00935-01 -C3L-00935.miRNA-Seq.T.hg38 C3L-00935 UCEC miRNA-Seq tumor CPT0027220013 2a95c562-d2ed-414e-aa62-05534332a93a_mirnaseq_gdc_realn.bam 291083435 BAM NA 0eccff8a-2d64-44c3-8339-49481cde73ac eb78752a46472dac87f7d2cb4777275f hg38 Primary Tumor C3L-00935-01 -C3L-00935.RNA-Seq.chimeric.A.hg38 C3L-00935 UCEC RNA-Seq tissue_normal CPT0027230006 a7b721b0-1a17-42c6-bc05-f0ff7bd5003f.rna_seq.chimeric.gdc_realn.bam 161958738 BAM chimeric 3527ee4c-6952-432b-ad66-91d92b829dbe 4f417ad27b699eb2324d87dc3659454e hg38 Solid Tissue Normal C3L-00935-02 -C3L-00935.RNA-Seq.chimeric.T.hg38 C3L-00935 UCEC RNA-Seq tumor CPT0027220013 a95ce7ec-828f-499d-970f-9355239be85c.rna_seq.chimeric.gdc_realn.bam 55137765 BAM chimeric 5da28c22-17ad-4ae5-8fc7-f97da488cde2 7c9f1f9484d1c71401cd69432e1ba880 hg38 Primary Tumor C3L-00935-01 -C3L-00935.RNA-Seq.genomic.A.hg38 C3L-00935 UCEC RNA-Seq tissue_normal CPT0027230006 a7b721b0-1a17-42c6-bc05-f0ff7bd5003f.rna_seq.genomic.gdc_realn.bam 9529338219 BAM genomic 491dc107-62c9-4d0a-961c-d815885c8b72 819a360a5d99b0d3c85bab030d2d7667 hg38 Solid Tissue Normal C3L-00935-02 -C3L-00935.RNA-Seq.genomic.T.hg38 C3L-00935 UCEC RNA-Seq tumor CPT0027220013 a95ce7ec-828f-499d-970f-9355239be85c.rna_seq.genomic.gdc_realn.bam 8067932130 BAM genomic eb50f33d-9f47-4807-a04f-20eb4b4b0d78 6ef781e2c408de36cc970bfd41c3d9ba hg38 Primary Tumor C3L-00935-01 -C3L-00935.RNA-Seq.R1.A C3L-00935 UCEC RNA-Seq tissue_normal CPT0027230006 180109_UNC31-K00269_0107_AHNHY2BBXX_TAGCTT_S4_L001_R1_001.fastq.gz 4410023854 FASTQ NA 0c5dacc7-1965-44c4-8864-b3cfed6e7ae6 45e397597808b7cedabd3e5dd14c84be NA Solid Tissue Normal C3L-00935-02 -C3L-00935.RNA-Seq.R1.T C3L-00935 UCEC RNA-Seq tumor CPT0027220013 170912_UNC31-K00269_0081_AHL3YKBBXX_AGTCAA_S16_L004_R1_001.fastq.gz 3536146701 FASTQ NA 042146c9-1d4e-4351-a3d0-43c16ff82f41 39e62098d14d891b8f8a903903dbb10a NA Primary Tumor C3L-00935-01 -C3L-00935.RNA-Seq.R2.A C3L-00935 UCEC RNA-Seq tissue_normal CPT0027230006 180109_UNC31-K00269_0107_AHNHY2BBXX_TAGCTT_S4_L001_R2_001.fastq.gz 4987811936 FASTQ NA 1ac17d45-b695-4b0c-a71c-5fc529eb7c16 e7a2d0c0d0cec86feba30ad91d0af600 NA Solid Tissue Normal C3L-00935-02 -C3L-00935.RNA-Seq.R2.T C3L-00935 UCEC RNA-Seq tumor CPT0027220013 170912_UNC31-K00269_0081_AHL3YKBBXX_AGTCAA_S16_L004_R2_001.fastq.gz 3947060523 FASTQ NA 6d4a7c47-3360-4676-aa9e-66ded7ac3000 bb1c583d6f340f5ac00cc4ad83e602dc NA Primary Tumor C3L-00935-01 -C3L-00935.RNA-Seq.transcriptome.A.hg38 C3L-00935 UCEC RNA-Seq tissue_normal CPT0027230006 a7b721b0-1a17-42c6-bc05-f0ff7bd5003f.rna_seq.transcriptome.gdc_realn.bam 11831519354 BAM transcriptome 781211a1-a288-4540-98ac-41149f48652d 2e387f4b7a80a967c50ec3e3e4c5e1a4 hg38 Solid Tissue Normal C3L-00935-02 -C3L-00935.RNA-Seq.transcriptome.T.hg38 C3L-00935 UCEC RNA-Seq tumor CPT0027220013 a95ce7ec-828f-499d-970f-9355239be85c.rna_seq.transcriptome.gdc_realn.bam 9558380307 BAM transcriptome fa01042b-54d4-40de-b6cf-767952d5ade8 00d0762f4d92d1d902cc969b74725c5d hg38 Primary Tumor C3L-00935-01 -C3L-00935.WGS.A C3L-00935 UCEC WGS tissue_normal CPT0027230009 CPT0027230009.WholeGenome.RP-1303.bam 53125099105 BAM NA 3bfe2725-93f2-420f-86cb-1c3a70fad0bb 01518a399f6ddacccd449ef744e9fddc hg19 Solid Tissue Normal C3L-00935-02 -C3L-00935.WGS.A.hg38 C3L-00935 UCEC WGS tissue_normal CPT0027230009 821fdf87-30a0-4dd1-9a9d-3d3bb7efbab0_wgs_gdc_realn.bam 77015541916 BAM NA 088efaf5-f1ef-44d1-a675-f7b03464e169 6f4218bf3175425656de167805d16f54 hg38 Solid Tissue Normal C3L-00935-02 -C3L-00935.WGS.N C3L-00935 UCEC WGS blood_normal CPT0027280002 CPT0027280002.WholeGenome.RP-1303.bam 70082199132 BAM NA c2eb1a15-5ed5-4351-9df5-e169743f656c 0e7d84c5c33fec87983c58982f2e28a0 hg19 Blood Derived Normal C3L-00935-31,C3L-00935-71 -C3L-00935.WGS.N.hg38 C3L-00935 UCEC WGS blood_normal CPT0027280002 8a85343c-93ed-4ab5-9012-afde6177de3e_gdc_realn.bam 100906567191 BAM NA d014202b-ec83-45ea-95cb-b82c57a747da 7f04e4957e618d98657d334bb476ffe5 hg38 Blood Derived Normal C3L-00935-31,C3L-00935-71 -C3L-00935.WGS.T C3L-00935 UCEC WGS tumor CPT0027220009 CPT0027220009.WholeGenome.RP-1303.bam 75715906337 BAM NA 34ec23c0-fb19-4ad8-bb15-d9fe2b22386c 7fb489fb43bebb14e31bb4a5d4a660d5 hg19 Primary Tumor C3L-00935-01 -C3L-00935.WGS.T.hg38 C3L-00935 UCEC WGS tumor CPT0027220009 8dd384fc-54c9-4764-a288-7c0183f33592_gdc_realn.bam 111230571404 BAM NA 57d2cd52-d763-4ece-bf74-acc7b7e805e7 032e3b6f6963e4afc8681f40425aad41 hg38 Primary Tumor C3L-00935-01 -C3L-00935.WXS.A C3L-00935 UCEC WXS tissue_normal CPT0027230009 CPT0027230009.WholeExome.RP-1303.bam 29304224835 BAM NA 5f7ed745-d1a3-435c-9a38-bc02156d456b 8e69987418bd95418b7108847af55582 hg19 Solid Tissue Normal C3L-00935-02 -C3L-00935.WXS.A.hg38 C3L-00935 UCEC WXS tissue_normal CPT0027230009 821fdf87-30a0-4dd1-9a9d-3d3bb7efbab0_wxs_gdc_realn.bam 39360652725 BAM NA 8f263c85-08b6-4c5e-a023-a53fe1a15e1b cc2cac037740724de0cfbebdbe30cf2c hg38 Solid Tissue Normal C3L-00935-02 -C3L-00935.WXS.N C3L-00935 UCEC WXS blood_normal CPT0027280002 CPT0027280002.WholeExome.RP-1303.bam 27944376622 BAM NA be58e37a-bdf1-4117-bbef-8a2c59d3330f 9199686562277f1bc4e7b74ec59afc73 hg19 Blood Derived Normal C3L-00935-31,C3L-00935-71 -C3L-00935.WXS.N.hg38 C3L-00935 UCEC WXS blood_normal CPT0027280002 8a85343c-93ed-4ab5-9012-afde6177de3e_gdc_realn.bam 38501037696 BAM NA 19491ce2-1d2c-4b3a-8e58-800eb5a08596 c412d3fb0dc930cfec97ae97c192a750 hg38 Blood Derived Normal C3L-00935-31,C3L-00935-71 -C3L-00935.WXS.T C3L-00935 UCEC WXS tumor CPT0027220009 CPT0027220009.WholeExome.RP-1303.bam 19569522008 BAM NA de9c2f61-9f12-4ca6-8ebe-3d6ea58f5359 aee598d3e662f3b700dfae8f5f989aeb hg19 Primary Tumor C3L-00935-01 -C3L-00935.WXS.T.hg38 C3L-00935 UCEC WXS tumor CPT0027220009 8dd384fc-54c9-4764-a288-7c0183f33592_gdc_realn.bam 27281165834 BAM NA 697382e1-fce8-497e-82e2-130b6a18190a 39c38a96b7c9c3f086d2c00325c4bda8 hg38 Primary Tumor C3L-00935-01 C3L-00938.MethArray.Green.T C3L-00938 UCEC Methylation Array tumor CPT0016260006 202184990066_R02C01_Grn.idat 13676216 IDAT Green 1adc7222-b0b2-4258-9cb6-1229f5ff685b df63391128f3dc2256046d466b3b13d1 NA Primary Tumor C3L-00938-01 C3L-00938.MethArray.Red.T C3L-00938 UCEC Methylation Array tumor CPT0016260006 202184990066_R02C01_Red.idat 13676216 IDAT Red 4efbbc9b-59b1-433b-9744-a7f055a71d53 0f731b46fe07d2b422d868bd830d2403 NA Primary Tumor C3L-00938-01 C3L-00938.miRNA-Seq.T C3L-00938 UCEC miRNA-Seq tumor CPT0016260009 180924_UNC31-K00269_0154_AHWTMLBBXX_CTCAGA_S32_L002_R1_001.unaln.bam 307830642 BAM NA ef1cfd7c-3e08-4cb3-8321-2927e3f0741e edf3db4a4042bb76abf044e7c5de9c7d NA Primary Tumor C3L-00938-01 @@ -5277,6 +4920,8 @@ C3L-00968.RNA-Seq.R2.A C3L-00968 CCRCC RNA-Seq tissue_normal CPT0101740009 18051 C3L-00968.RNA-Seq.R2.T C3L-00968 CCRCC RNA-Seq tumor CPT0101710006 171109_UNC31-K00269_0090_AHLHNWBBXX_GTTTCG_S12_L003_R2_001.fastq.gz 3924284333 FASTQ NA 2f1c5a8f-a3c4-4da6-ae04-a15168219c03 ffcddcd03fac5afa4ca5b7b3674cf1a8 NA Primary Tumor C3L-00968-04 C3L-00968.RNA-Seq.transcriptome.A.hg38 C3L-00968 CCRCC RNA-Seq tissue_normal CPT0101740009 4dd8bbd4-5b51-4fbb-b47d-98afe9a4b057.rna_seq.transcriptome.gdc_realn.bam 10250163686 BAM transcriptome 70de3055-793f-4938-9a9a-87f2123a8ce9 f174738c90a813724815cbfb4d9c3c2f hg38 Solid Tissue Normal C3L-00968-07 C3L-00968.RNA-Seq.transcriptome.T.hg38 C3L-00968 CCRCC RNA-Seq tumor CPT0101710006 db7189dc-5c4f-4974-b007-bd68df864f7d.rna_seq.transcriptome.gdc_realn.bam 11916801924 BAM transcriptome 67844d0f-b68b-49e6-8984-de7b4a343fff 35702d2c1f7180807a072b34a999d066 hg38 Primary Tumor C3L-00968-04 +C3L-00968.scRNA-Seq.R1.T C3L-00968 CCRCC scRNA-Seq tumor CPT0101710013 20220404_WUSTL_TWHG-CPT0101710013-Y1N1Z1_1Bmn1_1_TTCTCGATGA+GTGCCCGACA_S6_L004_R1_001.fastq.gz 9796769135 FASTQ NA 2206bb21-411a-46ab-94e6-a0ca92959b70 4b12c1ebc0206dd887ec78c954c7c867 NA Primary Tumor C3L-00968-04 +C3L-00968.scRNA-Seq.R2.T C3L-00968 CCRCC scRNA-Seq tumor CPT0101710013 20220404_WUSTL_TWHG-CPT0101710013-Y1N1Z1_1Bmn1_1_TTCTCGATGA+GTGCCCGACA_S6_L004_R2_001.fastq.gz 36120752405 FASTQ NA 0d553c4a-d2a9-4ba1-a33c-9cf52485f235 6ec355ac0249cb0750a062141fba2bd3 NA Primary Tumor C3L-00968-04 C3L-00968.WGS.A C3L-00968 CCRCC WGS tissue_normal CPT0101740006 CPT0101740006.WholeGenome.RP-1303.bam 64142342151 BAM NA 8df5d7c8-7ce6-413b-8677-fd9d8b05a5e3 7edcd9272a53a65904aa5baff044f1ca hg19 Solid Tissue Normal C3L-00968-07 C3L-00968.WGS.A.hg38 C3L-00968 CCRCC WGS tissue_normal CPT0101740006 19f28427-afc9-4483-8b66-c9593725b3c4_wgs_gdc_realn.bam 93567774209 BAM NA cd580ac5-9490-4f80-9df4-e6b4dffafafd 99d68718ab415395cb89b7641b8d284f hg38 Solid Tissue Normal C3L-00968-07 C3L-00968.WGS.N C3L-00968 CCRCC WGS blood_normal CPT0100990002 CPT0100990002.WholeGenome.RP-1303.bam 62557230591 BAM NA e8bf7eed-0992-4ca6-98e8-398383296d38 0d770e60779329c04469b572325ec29b hg19 Blood Derived Normal C3L-00968-31 @@ -7032,23 +6677,6 @@ C3L-01283.WXS.N C3L-01283 CCRCC WXS blood_normal CPT0080120001 CPT0080120001.Who C3L-01283.WXS.N.hg38 C3L-01283 CCRCC WXS blood_normal CPT0080120001 e8c358f4-8994-4b68-aa8a-521b69eee0f9_gdc_realn.bam 43112561185 BAM NA 8d29cc75-bf30-4b44-a15e-5612ff9ca054 8558ef5ede01abfabb4088b776278fa8 hg38 Blood Derived Normal C3L-01283-31 C3L-01283.WXS.T C3L-01283 CCRCC WXS tumor CPT0079380009 CPT0079380009.WholeExome.RP-1303.bam 25497345225 BAM NA 4c1d75f1-1fbb-4b4d-848d-7ebf03f36720 c071a89fb78060cd94d719bd41c3d532 hg19 Primary Tumor C3L-01283-01 C3L-01283.WXS.T.hg38 C3L-01283 CCRCC WXS tumor CPT0079380009 378ea411-3d58-4f9a-803d-8b7b89c9a5b3_gdc_realn.bam 34985381875 BAM NA b2e8bff6-307d-4f95-902d-f89c6b0a2401 10f6bce2d07135a569a8013d3508b32f hg38 Primary Tumor C3L-01283-01 -C3L-01284.MethArray.Green.T C3L-01284 UCEC Methylation Array tumor CPT0079570009 202178770008_R05C01_Grn.idat 13676231 IDAT Green fee5c479-efa4-4799-b598-b648a6f8d2b2 41e1d9dd0b7962cb0a0847353e9b5bb4 NA Primary Tumor C3L-01284-02 -C3L-01284.MethArray.Red.T C3L-01284 UCEC Methylation Array tumor CPT0079570009 202178770008_R05C01_Red.idat 13676231 IDAT Red e65f4a87-58b3-4009-b172-bc3496ee1408 ab3884e330ae8bfe448cfec32c613400 NA Primary Tumor C3L-01284-02 -C3L-01284.miRNA-Seq.T C3L-01284 UCEC miRNA-Seq tumor CPT0079570006 181012_UNC32-K00270_0124_AH223CBBXY_CAGGCG_S6_L001_R1_001.unaln.bam 251345394 BAM NA 2986921b-38fb-4b5c-826a-d1e682792a79 eb6112b9ff175ac32aa96fdf921f3a0d NA Primary Tumor C3L-01284-02 -C3L-01284.miRNA-Seq.T.hg38 C3L-01284 UCEC miRNA-Seq tumor CPT0079570006 59ad2a6f-989e-4d1d-9490-80a87f3de906_mirnaseq_gdc_realn.bam 276339389 BAM NA b86b6bc1-6941-44f0-99d8-d55ccdb8df74 b3f93c277879093e265a1b4427f4026f hg38 Primary Tumor C3L-01284-02 -C3L-01284.RNA-Seq.chimeric.T.hg38 C3L-01284 UCEC RNA-Seq tumor CPT0079570006 27e154f8-84cc-462f-885c-1a707baa8d2e.rna_seq.chimeric.gdc_realn.bam 161797285 BAM chimeric 7da894b7-2b4d-48ab-9d94-3ed0b3f277b3 309b8f19d0c42fcbc83b93f6f1cf55e5 hg38 Primary Tumor C3L-01284-02 -C3L-01284.RNA-Seq.genomic.T.hg38 C3L-01284 UCEC RNA-Seq tumor CPT0079570006 27e154f8-84cc-462f-885c-1a707baa8d2e.rna_seq.genomic.gdc_realn.bam 8086277558 BAM genomic 13e89eb5-488e-4b9a-9042-c12564076f9e 1ca5e01522df2deac31a55de03289027 hg38 Primary Tumor C3L-01284-02 -C3L-01284.RNA-Seq.R1.T C3L-01284 UCEC RNA-Seq tumor CPT0079570006 170905_UNC31-K00269_0079_AHLCF7BBXX_GCCAAT_S18_L005_R1_001.fastq.gz 4125869804 FASTQ NA 60c35ad5-8f48-49d5-b0a1-fb2f195c929d 4d622f223b620aa1d3b808ecef784bf5 NA Primary Tumor C3L-01284-02 -C3L-01284.RNA-Seq.R2.T C3L-01284 UCEC RNA-Seq tumor CPT0079570006 170905_UNC31-K00269_0079_AHLCF7BBXX_GCCAAT_S18_L005_R2_001.fastq.gz 4484646584 FASTQ NA d69c5f9f-e4a8-4596-82e9-53b579863bda bed9718b9655170b3805bca36d9fdb28 NA Primary Tumor C3L-01284-02 -C3L-01284.RNA-Seq.transcriptome.T.hg38 C3L-01284 UCEC RNA-Seq tumor CPT0079570006 27e154f8-84cc-462f-885c-1a707baa8d2e.rna_seq.transcriptome.gdc_realn.bam 11882237423 BAM transcriptome f5f0e85a-b5fe-4f7b-91bd-47f4f4a1e07a 75b3772e0b32dea202c634fca0320d04 hg38 Primary Tumor C3L-01284-02 -C3L-01284.WGS.N C3L-01284 UCEC WGS blood_normal CPT0080140002 CPT0080140002.WholeGenome.RP-1303.bam 71632230379 BAM NA 49959845-e20f-4f53-a952-6485cf23c4fb c481341c25ab7f474d384961cb0ca32d hg19 Blood Derived Normal C3L-01284-31 -C3L-01284.WGS.N.hg38 C3L-01284 UCEC WGS blood_normal CPT0080140002 3d32ea57-7403-4d6e-ad7a-c86faa54393d_gdc_realn.bam 106717353602 BAM NA bd10e94b-b778-44a2-a1af-3caf087d274f 9a70d3892606637188943e28fa6093e7 hg38 Blood Derived Normal C3L-01284-31 -C3L-01284.WGS.T C3L-01284 UCEC WGS tumor CPT0079570009 CPT0079570009.WholeGenome.RP-1303.bam 71650540814 BAM NA abeb70b7-02b3-415d-9fff-13c1665fc10f 26a73a2298bd5de707039cd02cdf7ab0 hg19 Primary Tumor C3L-01284-02 -C3L-01284.WGS.T.hg38 C3L-01284 UCEC WGS tumor CPT0079570009 f36e8c4a-0fc4-4b27-9629-d4838f7ba815_gdc_realn.bam 108540333280 BAM NA a9b52bf6-4681-41a9-a3c9-5c13609de510 bf555f642be21f5a8903100cc74f9a96 hg38 Primary Tumor C3L-01284-02 -C3L-01284.WXS.N C3L-01284 UCEC WXS blood_normal CPT0080140002 CPT0080140002.WholeExome.RP-1303.bam 24335916939 BAM NA 8f08d1cf-ed53-4bc4-9033-0487b003bce5 db331f2a649c24fce3ec370a5e8e5306 hg19 Blood Derived Normal C3L-01284-31 -C3L-01284.WXS.N.hg38 C3L-01284 UCEC WXS blood_normal CPT0080140002 3d32ea57-7403-4d6e-ad7a-c86faa54393d_gdc_realn.bam 32938287456 BAM NA 7725038c-3433-45d5-bda4-1b5dd52a9b87 56441cb22940daa96fa8a3149c039ad3 hg38 Blood Derived Normal C3L-01284-31 -C3L-01284.WXS.T C3L-01284 UCEC WXS tumor CPT0079570009 CPT0079570009.WholeExome.RP-1303.bam 31950310271 BAM NA b360a00e-03b6-4536-96f8-1720130cc83b dc8e4038a47bdb78214ad08561ea74e7 hg19 Primary Tumor C3L-01284-02 -C3L-01284.WXS.T.hg38 C3L-01284 UCEC WXS tumor CPT0079570009 f36e8c4a-0fc4-4b27-9629-d4838f7ba815_gdc_realn.bam 43317132193 BAM NA c5047b0d-9e91-41d3-bef5-ba35d086456d e6377a02e834af27ad4184e96fa63719 hg38 Primary Tumor C3L-01284-02 C3L-01285.MethArray.Green.A C3L-01285 LSCC Methylation Array tissue_normal CPT0087210006 203219670106_R02C01_Grn.idat 13676241 IDAT Green 484d19ae-e7cf-4748-a344-c3fe37f5a647 9929bc792e4080d37c3fb66079cac973 NA Solid Tissue Normal C3L-01285-06 C3L-01285.MethArray.Green.T.ADNA_roMl92 C3L-01285 LSCC Methylation Array tumor CPT0087190009 203219720203_R06C01_Grn.idat 13676221 IDAT Green 22ed4990-0f17-4b9b-85fe-1058026ad5c7 7658406412d9bf25d3fdb12d0ce8cd47 NA Primary Tumor C3L-01285-02 sample_tag=ADNA_roMl92 Duplicate item: Additional DNA requested C3L-01285.MethArray.Red.A C3L-01285 LSCC Methylation Array tissue_normal CPT0087210006 203219670106_R02C01_Red.idat 13676241 IDAT Red ad8b17b9-ed6e-4faa-90de-499605c390ee 371a6f8c68d882e59c4e38b4a86ba493 NA Solid Tissue Normal C3L-01285-06 @@ -7240,6 +6868,7 @@ C3L-01295.WGS.Nbc C3L-01295 AML WGS buccal_normal CPT0099640002 CPT0099640002.Wh C3L-01295.WGS.Nbc.hg38 C3L-01295 AML WGS buccal_normal CPT0099640002 d594d3a4-c362-45a5-9283-92b99a78469d_wgs_gdc_realn.bam 109628472544 BAM NA c224d7f9-818d-4419-bfcc-ba20830a688d 7f4d5e8387cdcf37d720b9d7697d8a60 hg38 Buccal Cell Normal C3L-01295-51,C3L-01295-52,C3L-01295-53 C3L-01295.WGS.Tbm C3L-01295 AML WGS tumor_bone_marrow CPT0099560002_1 CPT0099560002_1.WholeGenome.RP-1303.bam 68763622262 BAM NA 078f15a6-9fab-4bb8-9138-0e57a1759319 31554b889b5d9f6db6d8dc43edf9eb87 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-01295-54 C3L-01295.WGS.Tbm C3L-01295 AML WGS tumor_bone_marrow CPT0099560002 CPT0099560002.WholeGenome.RP-1303.bam 23922175268 BAM NA a049a44a-1bf7-4741-bc21-66ace36d90a6 be7f66ebb2ca2193bc197fcebbe7a969 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-01295-54 +C3L-01295.WGS.Tbm.hg38 C3L-01295 AML WGS tumor_bone_marrow CPT0099560002_1 3205a569-ab23-4c2e-9e2f-1a47c4450295_wgs_gdc_realn.bam 99827023129 BAM NA 89be8230-404f-41ec-8b81-c223f12201bd 1934411b7a3ea1c44764c0a3b4baa616 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-01295-54 C3L-01295.WGS.Tbm.hg38 C3L-01295 AML WGS tumor_bone_marrow CPT0099560002 fc805067-c5dc-4e24-85cc-f584a58b2728_wgs_gdc_realn.bam 34126293284 BAM NA 5d51ea11-528e-49dc-8ffd-d1b6f4d15a59 e165039de7a40b065eee395a87321bdb hg38 Primary Blood Derived Cancer - Bone Marrow C3L-01295-54 C3L-01295.WXS.Nbc C3L-01295 AML WXS buccal_normal CPT0099640002 CPT0099640002.WholeExome.RP-1303.bam 22563264860 BAM NA 2c75c437-a748-4e8d-a82a-900eec51eaf3 b1a2289886dd037e8573b9e3b2d510b2 hg19 Buccal Cell Normal C3L-01295-51,C3L-01295-52,C3L-01295-53 C3L-01295.WXS.Nbc.hg38 C3L-01295 AML WXS buccal_normal CPT0099640002 d594d3a4-c362-45a5-9283-92b99a78469d_wxs_gdc_realn.bam 32074188187 BAM NA c0286d1a-54de-4aa6-a763-290c5d4d7436 23b1f0fe6698e6280e7a1a7ca5a49b91 hg38 Buccal Cell Normal C3L-01295-51,C3L-01295-52,C3L-01295-53 @@ -7890,23 +7519,6 @@ C3L-01470.WXS.N C3L-01470 CCRCC WXS blood_normal CPT0086570002 CPT0086570002.Who C3L-01470.WXS.N.hg38 C3L-01470 CCRCC WXS blood_normal CPT0086570002 8de44709-a946-4db7-b5da-59703abe93b4_gdc_realn.bam 46736447632 BAM NA a6077b6b-e305-49c3-b57d-05f967a1f938 75874174f1441953fce88ea9fcc63b8d hg38 Blood Derived Normal C3L-01470-31 C3L-01470.WXS.T C3L-01470 CCRCC WXS tumor CPT0085580009 CPT0085580009.WholeExome.RP-1303.bam 37494557851 BAM NA 7d7d9780-9ad1-4a9d-a508-99281570bfde f570d37472e47723aed282ad5aa54215 hg19 Primary Tumor C3L-01470-01 C3L-01470.WXS.T.hg38 C3L-01470 CCRCC WXS tumor CPT0085580009 1102bb6d-67fa-48a6-a346-798aecc937ee_gdc_realn.bam 51708510156 BAM NA 4586a671-da98-4185-b28b-875b72f5773e b65567aa6c7810790aa34196bb2f4729 hg38 Primary Tumor C3L-01470-01 -C3L-01551.MethArray.Green.T C3L-01551 SAR Methylation Array tumor CPT0065990009 202178770008_R04C01_Grn.idat 13676232 IDAT Green 220adcaf-84c9-424c-a197-e24760407577 e9ff441c438281c46b7a5f242f211f11 NA Primary Tumor C3L-01551-01 -C3L-01551.MethArray.Red.T C3L-01551 SAR Methylation Array tumor CPT0065990009 202178770008_R04C01_Red.idat 13676232 IDAT Red 9506ddfc-f635-408b-b094-2bc3c1ddc429 6b98e1cd6ed04c27ee2844a5d88b3fba NA Primary Tumor C3L-01551-01 -C3L-01551.miRNA-Seq.T C3L-01551 SAR miRNA-Seq tumor CPT0065990006 181119_UNC31-K00269_0165_AH27WCBBXY_GGCTAC_S35_L005_R1_001.unaln.bam 206071346 BAM NA 260d7dd8-d8eb-4bce-a60e-d97c177a87a9 9f1f14b77917970b37e19afaed9f9bec NA Primary Tumor C3L-01551-01 -C3L-01551.miRNA-Seq.T.hg38 C3L-01551 SAR miRNA-Seq tumor CPT0065990006 0ebe5e8f-e3b8-414c-a1c5-8db2fe6c6d25_mirnaseq_gdc_realn.bam 226969041 BAM NA 44f83934-4f5e-45bf-9dc7-d18e7d478d95 2867f20f691b20a7aae6a33a625632d8 hg38 Primary Tumor C3L-01551-01 -C3L-01551.RNA-Seq.chimeric.T.hg38 C3L-01551 SAR RNA-Seq tumor CPT0065990006 f1ab168c-fbcb-466b-82fb-a1411ee0983f.rna_seq.chimeric.gdc_realn.bam 39688911 BAM chimeric 4f2e6e07-2641-4b3d-9e66-c3c28aa17353 2fe98e2f9569297fcdfef31c98128be6 hg38 Primary Tumor C3L-01551-01 -C3L-01551.RNA-Seq.genomic.T.hg38 C3L-01551 SAR RNA-Seq tumor CPT0065990006 f1ab168c-fbcb-466b-82fb-a1411ee0983f.rna_seq.genomic.gdc_realn.bam 10554855914 BAM genomic 8cd055f3-7b9a-400f-ab6b-674bd9d1f3e4 d14bc27ef681bf8a9b74d59fa30005e1 hg38 Primary Tumor C3L-01551-01 -C3L-01551.RNA-Seq.R1.T C3L-01551 SAR RNA-Seq tumor CPT0065990006 170828_UNC31-K00269_0077_AHLF33BBXX_GTCCGC_S1_L001_R1_001.fastq.gz 5249888911 FASTQ NA ff5e5708-365a-4927-83f7-70759aa89987 ccd11b28315d5edcfe6e2317a73c5fc1 NA Primary Tumor C3L-01551-01 -C3L-01551.RNA-Seq.R2.T C3L-01551 SAR RNA-Seq tumor CPT0065990006 170828_UNC31-K00269_0077_AHLF33BBXX_GTCCGC_S1_L001_R2_001.fastq.gz 5722134170 FASTQ NA 697563d0-0d9a-4c1c-905c-dc351229b32c 69d438bb42663f4534ae0505636b84bb NA Primary Tumor C3L-01551-01 -C3L-01551.RNA-Seq.transcriptome.T.hg38 C3L-01551 SAR RNA-Seq tumor CPT0065990006 f1ab168c-fbcb-466b-82fb-a1411ee0983f.rna_seq.transcriptome.gdc_realn.bam 17205781929 BAM transcriptome 43834d02-1ab9-40c2-b2e5-f70ccdb60212 d2a70ffafcf8e00378087a3a2ec57d86 hg38 Primary Tumor C3L-01551-01 -C3L-01551.WGS.N C3L-01551 SAR WGS blood_normal CPT0067750002 CPT0067750002.WholeGenome.RP-1303.bam 89363629879 BAM NA 0460a4a7-9f3b-4a51-a162-da86ab64298d 84c43624b1c8e3414177fb450c090c64 hg19 Blood Derived Normal C3L-01551-31 -C3L-01551.WGS.N.hg38 C3L-01551 SAR WGS blood_normal CPT0067750002 3f0e69ef-470c-4468-af37-1ca53b0ace1d_gdc_realn.bam 133832689701 BAM NA 18682737-cd6e-48bc-b5e0-9479eaa5a4cb 4516f09f738491642ef31a3152ce5093 hg38 Blood Derived Normal C3L-01551-31 -C3L-01551.WGS.T C3L-01551 SAR WGS tumor CPT0065990009 CPT0065990009.WholeGenome.RP-1303.bam 84747014737 BAM NA 1e3fe6ea-a184-47aa-90e8-335f4bf31f9a cef353db1e40d5a975603fafb9aa90f5 hg19 Primary Tumor C3L-01551-01 -C3L-01551.WGS.T.hg38 C3L-01551 SAR WGS tumor CPT0065990009 f51ee837-1f0c-4ab4-acef-363e7b2fff72_gdc_realn.bam 125116269619 BAM NA d6fcb9d9-e59b-40ff-8f57-76aa1cce5aff 1f58dc9d774712ddf808f5cc03722798 hg38 Primary Tumor C3L-01551-01 -C3L-01551.WXS.N C3L-01551 SAR WXS blood_normal CPT0067750002 CPT0067750002.WholeExome.RP-1303.bam 27125084356 BAM NA 9334a1fe-fe4a-438b-8635-0ce71abd31ba 718d76f4ca64b29b0c980481c650a68f hg19 Blood Derived Normal C3L-01551-31 -C3L-01551.WXS.N.hg38 C3L-01551 SAR WXS blood_normal CPT0067750002 3f0e69ef-470c-4468-af37-1ca53b0ace1d_gdc_realn.bam 36876957031 BAM NA 4681a214-634f-41db-806e-00b6ec472265 95eebc6187f0dcf14a9cd943447af9eb hg38 Blood Derived Normal C3L-01551-31 -C3L-01551.WXS.T C3L-01551 SAR WXS tumor CPT0065990009 CPT0065990009.WholeExome.RP-1303.bam 31573737994 BAM NA bf4ea512-a97d-474b-91c0-6373f91c3e19 21ce5c4c297e4612c04ef27dde7920aa hg19 Primary Tumor C3L-01551-01 -C3L-01551.WXS.T.hg38 C3L-01551 SAR WXS tumor CPT0065990009 f51ee837-1f0c-4ab4-acef-363e7b2fff72_gdc_realn.bam 44568084338 BAM NA 05298c09-1271-40f7-9e69-5d196c003544 bfa94751a22dde885bf304d61867c3af hg38 Primary Tumor C3L-01551-01 C3L-01553.MethArray.Green.T C3L-01553 CCRCC Methylation Array tumor CPT0065930009 202163550072_R05C01_Grn.idat 13676236 IDAT Green 1d7b5bc3-3cd0-4c8e-acab-844f4a428399 9cd58d2a2969ba55d02590347c3517ad NA Primary Tumor C3L-01553-01 C3L-01553.MethArray.Red.T C3L-01553 CCRCC Methylation Array tumor CPT0065930009 202163550072_R05C01_Red.idat 13676236 IDAT Red 23ef3c24-3779-4993-b0e1-bc66fa6c0ce5 6a2064a8ecf2edfdbdc4d2bfc530010c NA Primary Tumor C3L-01553-01 C3L-01553.miRNA-Seq.T C3L-01553 CCRCC miRNA-Seq tumor CPT0065930006 181108_UNC31-K00269_0163_BH23TVBBXY_TAGCTT_S10_L001_R1_001.unaln.bam 215893831 BAM NA 6862d8f3-bfd6-4c78-b2a3-131c6de57de9 13e8433429f29ab94dac732d96e1658a NA Primary Tumor C3L-01553-01 @@ -8108,23 +7720,6 @@ C3L-01603.WXS.T.HET_roE4nw.hg38 C3L-01603 CCRCC WXS tumor CPT0087030009 aaedabcc C3L-01603.WXS.T.HET_roEl76 C3L-01603 CCRCC WXS tumor CPT0087020009 CPT0087020009.WholeExome.RP-1303.bam 21348531179 BAM NA e5e31d36-6c04-4fbf-b38c-f1faaa13f39b 3ec8036a10927808f381667f65055bae hg19 Primary Tumor C3L-01603-01 sample_tag=HET_roEl76 Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-01603.WXS.T.HET_roEl76.hg38 C3L-01603 CCRCC WXS tumor CPT0087020009 9be1846a-7ec6-4fa3-861e-5505d3402179_wxs_gdc_realn.bam 29546693577 BAM NA 25660fe8-ec5f-4e50-9045-d142648e35e7 0d38e9623d8d732fecb5da8a4090309a hg38 Primary Tumor C3L-01603-01 sample_tag=HET_roEl76 Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-01603.WXS.T.hg38 C3L-01603 CCRCC WXS tumor CPT0087040009 68b4ea45-a8af-4d72-b8b0-35a102d2f517_gdc_realn.bam 65921297500 BAM NA 9cf6e0c1-e777-4ca3-b956-07947dce8216 1e88d381a9c082b9cab126fd0f16f276 hg38 Primary Tumor C3L-01603-03 -C3L-01604.MethArray.Green.T C3L-01604 UCEC Methylation Array tumor CPT0086410009 202176290105_R07C01_Grn.idat 13676216 IDAT Green 5b0d4980-f174-4309-81c7-b752ef145e53 7c1ab4eb66602fdda80241f3fd558312 NA Primary Tumor C3L-01604-01 -C3L-01604.MethArray.Red.T C3L-01604 UCEC Methylation Array tumor CPT0086410009 202176290105_R07C01_Red.idat 13676216 IDAT Red 04d1f4a6-3ecd-4a25-9645-89e8f8e9a7fd aa7e89b762ed07c7ecaf28d6558d5f4b NA Primary Tumor C3L-01604-01 -C3L-01604.miRNA-Seq.T C3L-01604 UCEC miRNA-Seq tumor CPT0086410006 181012_UNC32-K00270_0124_AH223CBBXY_TCGAAG_S20_L006_R1_001.unaln.bam 178643289 BAM NA 94a75942-f76e-40cf-a313-d1678c67cd9e 7ade5c0fbaff224ba83883337029a43a NA Primary Tumor C3L-01604-01 -C3L-01604.miRNA-Seq.T.hg38 C3L-01604 UCEC miRNA-Seq tumor CPT0086410006 9f2715d0-bed5-418c-a8d1-a8eba4e4a33d_mirnaseq_gdc_realn.bam 193305638 BAM NA 2df97c6c-9582-442d-9af7-f2626d278a7c a10d4f0e2fb7be8f7139d77355f3d088 hg38 Primary Tumor C3L-01604-01 -C3L-01604.RNA-Seq.chimeric.T.hg38 C3L-01604 UCEC RNA-Seq tumor CPT0086410006 56b21867-8512-49a5-b625-890f05c51e82.rna_seq.chimeric.gdc_realn.bam 36746918 BAM chimeric 03ca5e1d-0a78-450a-bda2-ad1fc2604542 c883418825f72e2bd4b3519f47325011 hg38 Primary Tumor C3L-01604-01 -C3L-01604.RNA-Seq.genomic.T.hg38 C3L-01604 UCEC RNA-Seq tumor CPT0086410006 56b21867-8512-49a5-b625-890f05c51e82.rna_seq.genomic.gdc_realn.bam 9463004322 BAM genomic 44f93d83-8698-4a17-8222-969d5bb83c9f f6bf4043acfcb7ed954e96881b27e302 hg38 Primary Tumor C3L-01604-01 -C3L-01604.RNA-Seq.R1.T C3L-01604 UCEC RNA-Seq tumor CPT0086410006 170908_UNC31-K00269_0080_BHLJ52BBXX_ATCACG_S9_L003_R1_001.fastq.gz 4638349765 FASTQ NA 84c24cd9-3510-4745-9c98-8d3d9e208bb6 12fe761d82006d5999112eb7e7f2a1d4 NA Primary Tumor C3L-01604-01 -C3L-01604.RNA-Seq.R2.T C3L-01604 UCEC RNA-Seq tumor CPT0086410006 170908_UNC31-K00269_0080_BHLJ52BBXX_ATCACG_S9_L003_R2_001.fastq.gz 4632559351 FASTQ NA 4e851cad-1fdf-4ea8-af7c-97f97b8827b9 b63eb69de0fb0df7edca26de45233e3b NA Primary Tumor C3L-01604-01 -C3L-01604.RNA-Seq.transcriptome.T.hg38 C3L-01604 UCEC RNA-Seq tumor CPT0086410006 56b21867-8512-49a5-b625-890f05c51e82.rna_seq.transcriptome.gdc_realn.bam 11054815581 BAM transcriptome 2d53bf5f-88e8-4dd8-aef4-f7da2927e6ba 769eabc78aafcd107dfd49010ce97473 hg38 Primary Tumor C3L-01604-01 -C3L-01604.WGS.N C3L-01604 UCEC WGS blood_normal CPT0087400002 CPT0087400002.WholeGenome.RP-1303.bam 65126664193 BAM NA 0f7daca5-248c-4730-aa84-646fe5ce042f d7c9d1fa0b3a10ac6695853a63ec1e1e hg19 Blood Derived Normal C3L-01604-31 -C3L-01604.WGS.N.hg38 C3L-01604 UCEC WGS blood_normal CPT0087400002 906fd915-ba9a-4efc-9783-e656e5bf0c3a_gdc_realn.bam 97598478509 BAM NA 202bb7e0-8cb6-42b8-879b-2f20b59d5b9b 062d10411c5e4566b91b9b422f897eaf hg38 Blood Derived Normal C3L-01604-31 -C3L-01604.WGS.T C3L-01604 UCEC WGS tumor CPT0086410009 CPT0086410009.WholeGenome.RP-1303.bam 80910353358 BAM NA c91ed8c9-6cab-4612-8601-073bcab41ad1 cce11407b677cd6f66a25a6b9eefdc4d hg19 Primary Tumor C3L-01604-01 -C3L-01604.WGS.T.hg38 C3L-01604 UCEC WGS tumor CPT0086410009 7f203466-2a9c-4d39-942b-991a80dd903e_gdc_realn.bam 123058939691 BAM NA a5ff7532-f58f-46f5-9a82-357b2a10c37f 781c327bc9df0cde67a797cefe3b616d hg38 Primary Tumor C3L-01604-01 -C3L-01604.WXS.N C3L-01604 UCEC WXS blood_normal CPT0087400002 CPT0087400002.WholeExome.RP-1303.bam 33116427591 BAM NA 6a75a84f-dc34-4e36-bb6f-342ac493e4cd 0a1193776458e882014893affdc192c3 hg19 Blood Derived Normal C3L-01604-31 -C3L-01604.WXS.N.hg38 C3L-01604 UCEC WXS blood_normal CPT0087400002 906fd915-ba9a-4efc-9783-e656e5bf0c3a_gdc_realn.bam 45882370885 BAM NA deea94d8-0ba4-4ab3-80b4-c264d2359857 a7766c0a943d553df8949e4e782a4557 hg38 Blood Derived Normal C3L-01604-31 -C3L-01604.WXS.T C3L-01604 UCEC WXS tumor CPT0086410009 CPT0086410009.WholeExome.RP-1303.bam 31678891183 BAM NA 7381a0ec-b1df-498d-b9b1-86da8ec961cb 16620135c86ca738af089d0fc82fce98 hg19 Primary Tumor C3L-01604-01 -C3L-01604.WXS.T.hg38 C3L-01604 UCEC WXS tumor CPT0086410009 7f203466-2a9c-4d39-942b-991a80dd903e_gdc_realn.bam 44315575046 BAM NA d71ae2ee-0611-44c1-a7ca-7f7d3a384cf9 43611cc9b5f596b00bdfb1ca45c7ca20 hg38 Primary Tumor C3L-01604-01 C3L-01606.MethArray.Green.A C3L-01606 LSCC Methylation Array tissue_normal CPT0086270006 203219650004_R02C01_Grn.idat 13676221 IDAT Green 532023b2-776a-4ec7-817f-cf2da8e4b73d 2ec37c99153e1ff0d3c3fd759865d9df NA Solid Tissue Normal C3L-01606-06 C3L-01606.MethArray.Green.T C3L-01606 LSCC Methylation Array tumor CPT0086260009 202234380064_R05C01_Grn.idat 13676231 IDAT Green 7dd8d9c3-640e-4222-844f-887078a86084 ecee926d810ef9fd00e08d77ff388dbf NA Primary Tumor C3L-01606-01 C3L-01606.MethArray.Red.A C3L-01606 LSCC Methylation Array tissue_normal CPT0086270006 203219650004_R02C01_Red.idat 13676221 IDAT Red fd2a3cc2-4213-4313-b576-cc14025e48b1 6fb36fb494ebb775493bdafec6058678 NA Solid Tissue Normal C3L-01606-06 @@ -8156,13 +7751,13 @@ C3L-01606.WXS.N.hg38 C3L-01606 LSCC WXS blood_normal CPT0087360002 14f61799-01e6 C3L-01606.WXS.T C3L-01606 LSCC WXS tumor CPT0086260009 CPT0086260009.WholeExome.RP-1303.bam 31391267209 BAM NA 13b8c9b1-6cf8-4915-ae94-3fce0f3c09e7 df5513a4bedaeb43e9586b5b053d0dd7 hg19 Primary Tumor C3L-01606-01 C3L-01606.WXS.T.hg38 C3L-01606 LSCC WXS tumor CPT0086260009 ae2ea600-3419-45eb-a7cc-e397a4f13e2e_wxs_gdc_realn.bam 42392754674 BAM NA 6cef75a3-5204-4914-948c-673047273d59 7148ae4f25752282e10de9de3ee863af hg38 Primary Tumor C3L-01606-01 C3L-01607.MethArray.Green.A C3L-01607 CCRCC Methylation Array tissue_normal CPT0092190013 204930630078_R06C01_Grn.idat 13677900 IDAT Green 853bc0e7-3685-4de3-9b7a-cba250a37598 e835313cfed0886b486593a99352da7c NA Solid Tissue Normal C3L-01607-06 -C3L-01607.MethArray.Green.T C3L-01607 CCRCC Methylation Array tumor CPT0092160009 202234380069_R04C01_Grn.idat 13676246 IDAT Green f2629a18-c437-4c62-9f0f-f1c0ddd24ca1 2b2ee282b495ac554a2c50c37af09232 NA Primary Tumor C3L-01607-01 C3L-01607.MethArray.Green.T.HET_rlG2xE C3L-01607 CCRCC Methylation Array tumor CPT0092180009 204367470131_R03C01_Grn.idat 13677880 IDAT Green 80a96047-b286-4d7e-aebb-66788fe9b08b 3fd94b17cb3d0ef7d7c4b7c2ce5d8bda NA Primary Tumor C3L-01607-03 sample_tag=HET_rlG2xE Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-01607.MethArray.Green.T.HET_rlGZvK C3L-01607 CCRCC Methylation Array tumor CPT0092170009 204372030071_R05C01_Grn.idat 13677890 IDAT Green 6a552b5f-0ba7-4469-a729-981ce12973bc 17aae55469e47ecfe65d831d255b27d5 NA Primary Tumor C3L-01607-02 sample_tag=HET_rlGZvK Duplicate item: CCRCC Tumor heterogeneity study aliquot +C3L-01607.MethArray.Green.T.UNK_rlWPB4 C3L-01607 CCRCC Methylation Array tumor CPT0092160009 202234380069_R04C01_Grn.idat 13676246 IDAT Green f2629a18-c437-4c62-9f0f-f1c0ddd24ca1 2b2ee282b495ac554a2c50c37af09232 NA Primary Tumor C3L-01607-01 sample_tag=UNK_rlWPB4 The WGS data for this aliquot failed the GDC harmonization pipeline. C3L-01607.MethArray.Red.A C3L-01607 CCRCC Methylation Array tissue_normal CPT0092190013 204930630078_R06C01_Red.idat 13677900 IDAT Red b8a339b9-6c5b-4db4-8a20-8552ba81718c 8ba8efc7d6b6c45cfbf49020303e3bd6 NA Solid Tissue Normal C3L-01607-06 -C3L-01607.MethArray.Red.T C3L-01607 CCRCC Methylation Array tumor CPT0092160009 202234380069_R04C01_Red.idat 13676246 IDAT Red 35c3fd9f-2b85-478a-b539-0d15519c3b73 ec40e145910d41e33776dd948277cb41 NA Primary Tumor C3L-01607-01 C3L-01607.MethArray.Red.T.HET_rlG2xE C3L-01607 CCRCC Methylation Array tumor CPT0092180009 204367470131_R03C01_Red.idat 13677880 IDAT Red b821d0f1-413f-45ce-a27d-da8c0a283ca2 813fb5718554e37fb02ffda4a1d13233 NA Primary Tumor C3L-01607-03 sample_tag=HET_rlG2xE Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-01607.MethArray.Red.T.HET_rlGZvK C3L-01607 CCRCC Methylation Array tumor CPT0092170009 204372030071_R05C01_Red.idat 13677890 IDAT Red 4b5e8dc3-a4ee-4066-9c3a-06502aa123a2 a0ee2bb9b8830104f090aef70b5c1250 NA Primary Tumor C3L-01607-02 sample_tag=HET_rlGZvK Duplicate item: CCRCC Tumor heterogeneity study aliquot +C3L-01607.MethArray.Red.T.UNK_rlWPB4 C3L-01607 CCRCC Methylation Array tumor CPT0092160009 202234380069_R04C01_Red.idat 13676246 IDAT Red 35c3fd9f-2b85-478a-b539-0d15519c3b73 ec40e145910d41e33776dd948277cb41 NA Primary Tumor C3L-01607-01 sample_tag=UNK_rlWPB4 The WGS data for this aliquot failed the GDC harmonization pipeline. C3L-01607.miRNA-Seq.A C3L-01607 CCRCC miRNA-Seq tissue_normal CPT0092190006 181108_UNC31-K00269_0163_BH23TVBBXY_GTCCGC_S18_L005_R1_001.unaln.bam 193654998 BAM NA 6c77cf2f-97e5-4465-91cb-c70d5b2e6dd6 25b8ea5f1d61c9ed7900df460ad1d997 NA Solid Tissue Normal C3L-01607-06 C3L-01607.miRNA-Seq.A.hg38 C3L-01607 CCRCC miRNA-Seq tissue_normal CPT0092190006 64c8338f-f7fa-498c-83e0-a88a38ff2966_mirnaseq_gdc_realn.bam 219474974 BAM NA c2f94ba3-1f47-4ae6-a4d2-d642b79c675c 1367c412424ce8ae73c8a936c82b824d hg38 Solid Tissue Normal C3L-01607-06 C3L-01607.miRNA-Seq.T C3L-01607 CCRCC miRNA-Seq tumor CPT0092160006 180724_UNC32-K00270_0106_BHWK3MBBXX_CACGAT_S7_L007_R1_001.unaln.bam 258690073 BAM NA 2d5021e4-fbff-4675-9d3d-13b676f53324 636e5b0329300aa8c5b847335d200f75 NA Primary Tumor C3L-01607-01 @@ -8195,22 +7790,22 @@ C3L-01607.WGS.A C3L-01607 CCRCC WGS tissue_normal CPT0092190009 CPT0092190009.Wh C3L-01607.WGS.A.hg38 C3L-01607 CCRCC WGS tissue_normal CPT0092190009 db922bd9-8bd7-408d-b971-bdafbf4a08ce_wgs_gdc_realn.bam 99501129833 BAM NA 4c725d63-9de7-4561-b68b-9ad43f8d16a5 64a907828008321f56f4aaaf25654f91 hg38 Solid Tissue Normal C3L-01607-06 C3L-01607.WGS.N C3L-01607 CCRCC WGS blood_normal CPT0093750002 CPT0093750002.WholeGenome.RP-1303.bam 67868807508 BAM NA 3249ca0d-16ec-4691-8fe4-9d63c59df5d7 3443a22b50b837331766eb090d7b4aa1 hg19 Blood Derived Normal C3L-01607-31 C3L-01607.WGS.N.hg38 C3L-01607 CCRCC WGS blood_normal CPT0093750002 2986b7c9-3b40-46f8-a85a-4160c153fb79_wgs_gdc_realn.bam 99746668230 BAM NA 7192e800-b3ae-4f0b-9bf1-f5ecd0e6fa51 081e9d078029ca790a6aa8bba225b15f hg38 Blood Derived Normal C3L-01607-31 -C3L-01607.WGS.T C3L-01607 CCRCC WGS tumor CPT0092160009 CPT0092160009.WholeGenome.RP-1303.bam 58074331772 BAM NA c3a0dc8e-2b96-4e3d-949a-26248bb322ca 53e933a5073647ae08e3b6553a7c13d3 hg19 Primary Tumor C3L-01607-01 C3L-01607.WGS.T.HET_rlG2xE C3L-01607 CCRCC WGS tumor CPT0092180009 CPT0092180009.WholeGenome.RP-2158.bam 28531084531 BAM NA 8eae0546-2d83-40c9-897c-fdcec1250fb1 c40cbc85b3dd9e66353d7368f52c04bd hg19 Primary Tumor C3L-01607-03 sample_tag=HET_rlG2xE Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-01607.WGS.T.HET_rlG2xE.hg38 C3L-01607 CCRCC WGS tumor CPT0092180009 9a22a752-6b30-46f1-82b8-65d20b385a02_wgs_gdc_realn.bam 83711726608 BAM NA cb9be0a8-2f2f-42d0-9f2b-da90d9b56abc 7e4f188250e22fc450795d0df67b2291 hg38 Primary Tumor C3L-01607-03 sample_tag=HET_rlG2xE Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-01607.WGS.T.HET_rlGZvK C3L-01607 CCRCC WGS tumor CPT0092170009 CPT0092170009.WholeGenome.RP-2158.bam 27883544958 BAM NA 2b865606-d10c-46fd-af6a-a6cb6b4878c1 495173a5debc66679ebabd3220900cc1 hg19 Primary Tumor C3L-01607-02 sample_tag=HET_rlGZvK Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-01607.WGS.T.HET_rlGZvK.hg38 C3L-01607 CCRCC WGS tumor CPT0092170009 6374c0d5-ac85-4991-98c8-b1cc0c3160f2_wgs_gdc_realn.bam 80388252737 BAM NA 9b270c4c-4dca-4ca5-9775-3dc642e2a249 57196301cc0beb3bac0330bae2a578bf hg38 Primary Tumor C3L-01607-02 sample_tag=HET_rlGZvK Duplicate item: CCRCC Tumor heterogeneity study aliquot -C3L-01607.WGS.T.hg38 C3L-01607 CCRCC WGS tumor CPT0092160009 0787b6cc-fab1-4c71-8db6-10d6093ce29d_wgs_gdc_realn.bam 85641289703 BAM NA baf65777-56c8-40be-a13d-b74c6fa34388 554b3e997f19a57a5b8e0b4b97b30284 hg38 Primary Tumor C3L-01607-01 +C3L-01607.WGS.T.UNK_rlWPB4 C3L-01607 CCRCC WGS tumor CPT0092160009 CPT0092160009.WholeGenome.RP-1303.bam 58074331772 BAM NA c3a0dc8e-2b96-4e3d-949a-26248bb322ca 53e933a5073647ae08e3b6553a7c13d3 hg19 Primary Tumor C3L-01607-01 sample_tag=UNK_rlWPB4 The WGS data for this aliquot failed the GDC harmonization pipeline. +C3L-01607.WGS.T.UNK_rlWPB4.hg38 C3L-01607 CCRCC WGS tumor CPT0092160009 0787b6cc-fab1-4c71-8db6-10d6093ce29d_wgs_gdc_realn.bam 85641289703 BAM NA baf65777-56c8-40be-a13d-b74c6fa34388 554b3e997f19a57a5b8e0b4b97b30284 hg38 Primary Tumor C3L-01607-01 sample_tag=UNK_rlWPB4 The WGS data for this aliquot failed the GDC harmonization pipeline. C3L-01607.WXS.A C3L-01607 CCRCC WXS tissue_normal CPT0092190009 CPT0092190009.WholeExome.RP-1303.bam 47923394079 BAM NA 4350688c-c085-4797-aa45-e72166263108 71f4000a70d64e4560cb3a417c34bd42 hg19 Solid Tissue Normal C3L-01607-06 C3L-01607.WXS.A.hg38 C3L-01607 CCRCC WXS tissue_normal CPT0092190009 db922bd9-8bd7-408d-b971-bdafbf4a08ce_wxs_gdc_realn.bam 64759989249 BAM NA d58995c2-6ee3-4c19-992f-94c236ece00d f88af4842e364280c37edfdab893fa8f hg38 Solid Tissue Normal C3L-01607-06 C3L-01607.WXS.N C3L-01607 CCRCC WXS blood_normal CPT0093750002 CPT0093750002.WholeExome.RP-1303.bam 33070394038 BAM NA ef20087f-66d0-4768-9c24-e6e6f40f8002 8073031393d1bcc08341053a81c82421 hg19 Blood Derived Normal C3L-01607-31 C3L-01607.WXS.N.hg38 C3L-01607 CCRCC WXS blood_normal CPT0093750002 2986b7c9-3b40-46f8-a85a-4160c153fb79_wxs_gdc_realn.bam 45394535909 BAM NA e3ad46da-7db1-40bd-b135-ceeeb270d8e5 b9e879d99cbedcefaf44f4e427113364 hg38 Blood Derived Normal C3L-01607-31 -C3L-01607.WXS.T C3L-01607 CCRCC WXS tumor CPT0092160009 CPT0092160009.WholeExome.RP-1303.bam 33833188091 BAM NA 16b4ad52-019f-45b8-af82-cf884e1421dd 7e3d9e7d1f5f981f227baecbfe7325a9 hg19 Primary Tumor C3L-01607-01 C3L-01607.WXS.T.HET_rlG2xE C3L-01607 CCRCC WXS tumor CPT0092180009 CPT0092180009.WholeExome.RP-1303.bam 24306445394 BAM NA 830cee91-b9a4-4798-ab66-9997ea42afaa e87f0cee5c45640d2430c575a2084019 hg19 Primary Tumor C3L-01607-03 sample_tag=HET_rlG2xE Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-01607.WXS.T.HET_rlG2xE.hg38 C3L-01607 CCRCC WXS tumor CPT0092180009 9a22a752-6b30-46f1-82b8-65d20b385a02_wxs_gdc_realn.bam 33253902428 BAM NA 1b7bab7c-3042-407d-a4c5-7e9dc15add88 ff09e09f89631623a24391a602f1edb5 hg38 Primary Tumor C3L-01607-03 sample_tag=HET_rlG2xE Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-01607.WXS.T.HET_rlGZvK C3L-01607 CCRCC WXS tumor CPT0092170009 CPT0092170009.WholeExome.RP-1303.bam 24010665875 BAM NA 63adb4cd-ded6-405b-8aea-373f6f498595 3aae08ea7d8922f6782dc6dca5402118 hg19 Primary Tumor C3L-01607-02 sample_tag=HET_rlGZvK Duplicate item: CCRCC Tumor heterogeneity study aliquot C3L-01607.WXS.T.HET_rlGZvK.hg38 C3L-01607 CCRCC WXS tumor CPT0092170009 6374c0d5-ac85-4991-98c8-b1cc0c3160f2_wxs_gdc_realn.bam 32449558479 BAM NA 27fecece-21f4-4ac6-a9ce-f528c514f6ac c7ddbe51b61be50082e1596bc99de3f5 hg38 Primary Tumor C3L-01607-02 sample_tag=HET_rlGZvK Duplicate item: CCRCC Tumor heterogeneity study aliquot -C3L-01607.WXS.T.hg38 C3L-01607 CCRCC WXS tumor CPT0092160009 0787b6cc-fab1-4c71-8db6-10d6093ce29d_wxs_gdc_realn.bam 46732242259 BAM NA 78055e79-e0e9-4a8d-989f-1c30f31745cd dc9b4d279ba71377e1bbd9d4812b6ead hg38 Primary Tumor C3L-01607-01 +C3L-01607.WXS.T.UNK_rlWPB4 C3L-01607 CCRCC WXS tumor CPT0092160009 CPT0092160009.WholeExome.RP-1303.bam 33833188091 BAM NA 16b4ad52-019f-45b8-af82-cf884e1421dd 7e3d9e7d1f5f981f227baecbfe7325a9 hg19 Primary Tumor C3L-01607-01 sample_tag=UNK_rlWPB4 The WGS data for this aliquot failed the GDC harmonization pipeline. +C3L-01607.WXS.T.UNK_rlWPB4.hg38 C3L-01607 CCRCC WXS tumor CPT0092160009 0787b6cc-fab1-4c71-8db6-10d6093ce29d_wxs_gdc_realn.bam 46732242259 BAM NA 78055e79-e0e9-4a8d-989f-1c30f31745cd dc9b4d279ba71377e1bbd9d4812b6ead hg38 Primary Tumor C3L-01607-01 sample_tag=UNK_rlWPB4 The WGS data for this aliquot failed the GDC harmonization pipeline. C3L-01631.MethArray.Green.T C3L-01631 UCEC Methylation Array tumor CPT0091720009 202234380051_R04C01_Grn.idat 13676231 IDAT Green 810c3000-3a91-4e59-ab17-2a5b3abedc4a 8a5111726a8af5afadf751e3832d9f73 NA Primary Tumor C3L-01631-01 C3L-01631.MethArray.Red.T C3L-01631 UCEC Methylation Array tumor CPT0091720009 202234380051_R04C01_Red.idat 13676231 IDAT Red 6c51a1b7-3ff1-4fcd-8d34-91bf052be2db 705481c9b73bfa4b1059ec4ab294b9bb NA Primary Tumor C3L-01631-01 C3L-01631.miRNA-Seq.T C3L-01631 UCEC miRNA-Seq tumor CPT0091720006 180828_UNC32-K00270_0112_AHWTLNBBXX_GATCAG_S1_L006_R1_001.unaln.bam 199721113 BAM NA 9f1e509d-1e57-413f-8f8c-5615d31b0486 44f8cfd37888a3b019cca8ac0b48499c NA Primary Tumor C3L-01631-01 @@ -8699,6 +8294,7 @@ C3L-01696.RNA-Seq.R2.Tbm C3L-01696 AML RNA-Seq tumor_bone_marrow CPT0166320002 1 C3L-01696.RNA-Seq.transcriptome.Tbm.hg38 C3L-01696 AML RNA-Seq tumor_bone_marrow CPT0166320002 2f6a264e-8491-43a9-8f6d-f88a21c64253.rna_seq.transcriptome.gdc_realn.bam 10137569179 BAM transcriptome 38d0ace6-95fb-489a-9d93-eb5450ce6f7d ef53d104d6cbed36b7651e20bc6c0a7f hg38 Primary Blood Derived Cancer - Bone Marrow C3L-01696-57 C3L-01696.WGS.Nbc C3L-01696 AML WGS buccal_normal CPT0166350003_1 CPT0166350003_1.WholeGenome.RP-1303.bam 69838458599 BAM NA a4410206-057d-44ce-9819-37f992dfbdfb 7250d270ad5940fcedf44e80eac90df6 hg19 Buccal Cell Normal C3L-01696-51,C3L-01696-52,C3L-01696-53 C3L-01696.WGS.Nbc C3L-01696 AML WGS buccal_normal CPT0166350003 CPT0166350003.WholeGenome.RP-1303.bam 21981937874 BAM NA de97474c-7074-43bd-a1f8-e98800f27ada dca8f62c04ec10e9985a6ef1fe3cc710 hg19 Buccal Cell Normal C3L-01696-51,C3L-01696-52,C3L-01696-53 +C3L-01696.WGS.Nbc.hg38 C3L-01696 AML WGS buccal_normal CPT0166350003_1 062dc65b-0cfc-4f1d-b5f4-64bff4bbc805_wgs_gdc_realn.bam 101206605126 BAM NA 75f30131-c76d-41f4-aeca-63d39aa3215b 0479455432fb8e7bec43c5651e775fa3 hg38 Buccal Cell Normal C3L-01696-51,C3L-01696-52,C3L-01696-53 C3L-01696.WGS.Nbc.hg38 C3L-01696 AML WGS buccal_normal CPT0166350003 a1ab108e-f673-4cce-862e-77fa87d4a4f5_wgs_gdc_realn.bam 30140254960 BAM NA 19666272-672e-45f8-98e1-10baefb2e231 80ff1d5bae4c11a6f21909f953dfded1 hg38 Buccal Cell Normal C3L-01696-51,C3L-01696-52,C3L-01696-53 C3L-01696.WGS.Tbm C3L-01696 AML WGS tumor_bone_marrow CPT0166290002 CPT0166290002.WholeGenome.RP-1303.bam 84446246342 BAM NA 7c30eb6a-4f4c-40fa-8565-27f50456a49c c9e6d9ca88f0cf06605b35a2e5cf0b05 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-01696-54 C3L-01696.WGS.Tbm.hg38 C3L-01696 AML WGS tumor_bone_marrow CPT0166290002 eeae1365-1d8d-4397-b2ba-bf7aae4883ae_wgs_gdc_realn.bam 123011651132 BAM NA 30772786-a9c8-40f0-b5c8-1853d6bd440b 86dd95f30662cdf418e4e48bf27fbf5a hg38 Primary Blood Derived Cancer - Bone Marrow C3L-01696-54 @@ -9204,34 +8800,6 @@ C3L-01882.WXS.N C3L-01882 CCRCC WXS blood_normal CPT0093820002 CPT0093820002.Who C3L-01882.WXS.N.hg38 C3L-01882 CCRCC WXS blood_normal CPT0093820002 57cd12ae-3813-4ebc-8afb-7369a9367c0a_wxs_gdc_realn.bam 44875544218 BAM NA aa8dcb5c-c43c-43b3-a6b5-6e4fda57c932 8c2f936c006afd45a05f2d16dcb0a99f hg38 Blood Derived Normal C3L-01882-31 C3L-01882.WXS.T C3L-01882 CCRCC WXS tumor CPT0092730009 CPT0092730009.WholeExome.RP-1303.bam 35464277386 BAM NA 472a62b4-06c8-4d13-aae3-32121d73942b 95d55deaac6d23495eb05ed72aca175f hg19 Primary Tumor C3L-01882-01 C3L-01882.WXS.T.hg38 C3L-01882 CCRCC WXS tumor CPT0092730009 efba470d-46ea-4677-97ff-8db35dd946d0_wxs_gdc_realn.bam 48769615200 BAM NA 3617bf1b-0525-4015-b764-cc38abe3bc6a 3fb0e89c2acee13327d8eca08c90b6e8 hg38 Primary Tumor C3L-01882-01 -C3L-01883.MethArray.Green.T C3L-01883 SAR Methylation Array tumor CPT0092360009 202234360028_R06C01_Grn.idat 13676226 IDAT Green 61db0825-d609-43f2-a523-4aa0bdcae9c0 7d8b716d4a13fc1da9187d04f1546290 NA Primary Tumor C3L-01883-01 -C3L-01883.MethArray.Red.T C3L-01883 SAR Methylation Array tumor CPT0092360009 202234360028_R06C01_Red.idat 13676226 IDAT Red 771136ad-6209-42bc-8297-97586107846a a0c31104181e7653a5bf344b06ee9169 NA Primary Tumor C3L-01883-01 -C3L-01883.miRNA-Seq.A C3L-01883 SAR miRNA-Seq tissue_normal CPT0092390008 181113_UNC31-K00269_0164_AH23NNBBXY_TCGGCA_S24_L005_R1_001.unaln.bam 175027344 BAM NA 18e9dc75-d260-43ff-bdd1-8beee16644f8 2acc188d1b94c489500b67cf9e453b18 NA Solid Tissue Normal C3L-01883-06 -C3L-01883.miRNA-Seq.A.hg38 C3L-01883 SAR miRNA-Seq tissue_normal CPT0092390008 5747ba2c-bb16-4db2-97b5-a0dbe5443486_mirnaseq_gdc_realn.bam 198969723 BAM NA a73d6ce6-2688-4a61-a1fa-b7ed466338d1 7542a832888c37b31b722db2787b6f06 hg38 Solid Tissue Normal C3L-01883-06 -C3L-01883.miRNA-Seq.T C3L-01883 SAR miRNA-Seq tumor CPT0092360006 180724_UNC32-K00270_0106_BHWK3MBBXX_CAGGCG_S9_L007_R1_001.unaln.bam 196056013 BAM NA 57263dbf-b7e3-4c20-ab93-ce095a7a42ba 05e19150aea5c72c37139318987c1c59 NA Primary Tumor C3L-01883-01 -C3L-01883.miRNA-Seq.T.hg38 C3L-01883 SAR miRNA-Seq tumor CPT0092360006 53a3a482-8e90-4f68-85c8-5227250c8046_mirnaseq_gdc_realn.bam 217059723 BAM NA 951dddf6-704b-4f46-ae39-00cfaf6ad95b 16032013ba5d4a2f68fff7602d3ccda0 hg38 Primary Tumor C3L-01883-01 -C3L-01883.RNA-Seq.chimeric.A.hg38 C3L-01883 SAR RNA-Seq tissue_normal CPT0092390008 8d5f4d9f-c972-4263-87f2-43c0cf15e4b2.rna_seq.chimeric.gdc_realn.bam 17050204 BAM chimeric 0781e889-d607-4806-b5ec-6f8cec801bcb c18162af12f8ae672bbdcd27f6cc2024 hg38 Solid Tissue Normal C3L-01883-06 -C3L-01883.RNA-Seq.chimeric.T.hg38 C3L-01883 SAR RNA-Seq tumor CPT0092360006 94b67d22-669e-4a50-93ae-881ef10cced3.rna_seq.chimeric.gdc_realn.bam 52601983 BAM chimeric 5098cda1-3e9c-4523-8531-7c0319ec088f df57d91d6f69b63764ac6eb706deb741 hg38 Primary Tumor C3L-01883-01 -C3L-01883.RNA-Seq.genomic.A.hg38 C3L-01883 SAR RNA-Seq tissue_normal CPT0092390008 8d5f4d9f-c972-4263-87f2-43c0cf15e4b2.rna_seq.genomic.gdc_realn.bam 6432534791 BAM genomic 647a9195-ee34-401e-92e3-39c8df5352a8 bdda5106d50d0090abf130dadcec8e3f hg38 Solid Tissue Normal C3L-01883-06 -C3L-01883.RNA-Seq.genomic.T.hg38 C3L-01883 SAR RNA-Seq tumor CPT0092360006 94b67d22-669e-4a50-93ae-881ef10cced3.rna_seq.genomic.gdc_realn.bam 8934029752 BAM genomic 99979f00-eb08-4861-9afd-9f4b42e02aad d87829b73b16627db452d6059e914f41 hg38 Primary Tumor C3L-01883-01 -C3L-01883.RNA-Seq.R1.A C3L-01883 SAR RNA-Seq tissue_normal CPT0092390008 180606_UNC32-K00270_0097_AHVCKFBBXX_ATTCCT_S15_L004_R1_001.fastq.gz 2810553924 FASTQ NA 146f94b6-7a6c-47d6-947f-088282fc242e efc4fa5bd7a5a38eb86255ef175e063b NA Solid Tissue Normal C3L-01883-06 -C3L-01883.RNA-Seq.R1.T C3L-01883 SAR RNA-Seq tumor CPT0092360006 171129_UNC32-K00270_0066_AHM25VBBXX_ACAGTG_S3_L005_R1_001.fastq.gz 4047255014 FASTQ NA ad07ae8c-02eb-489e-9f4b-699d849e058b c4ebfc0f72219b864320634512ea8ecb NA Primary Tumor C3L-01883-01 -C3L-01883.RNA-Seq.R2.A C3L-01883 SAR RNA-Seq tissue_normal CPT0092390008 180606_UNC32-K00270_0097_AHVCKFBBXX_ATTCCT_S15_L004_R2_001.fastq.gz 3102756334 FASTQ NA 77dd08fb-5d96-4106-a093-7fd798de8353 87e1bf32dccd779a1a5c16640d377a7c NA Solid Tissue Normal C3L-01883-06 -C3L-01883.RNA-Seq.R2.T C3L-01883 SAR RNA-Seq tumor CPT0092360006 171129_UNC32-K00270_0066_AHM25VBBXX_ACAGTG_S3_L005_R2_001.fastq.gz 4478428030 FASTQ NA 81fe4ae1-8f2d-4e55-819f-4be611633d45 88b233ac3909b6fc77583850aa67db80 NA Primary Tumor C3L-01883-01 -C3L-01883.RNA-Seq.transcriptome.A.hg38 C3L-01883 SAR RNA-Seq tissue_normal CPT0092390008 8d5f4d9f-c972-4263-87f2-43c0cf15e4b2.rna_seq.transcriptome.gdc_realn.bam 8424576780 BAM transcriptome 1394ba0b-cd3e-4d58-95dc-c36ce3dbd1e4 86b6eb2d45fbf68dd0e81ced3ffd874a hg38 Solid Tissue Normal C3L-01883-06 -C3L-01883.RNA-Seq.transcriptome.T.hg38 C3L-01883 SAR RNA-Seq tumor CPT0092360006 94b67d22-669e-4a50-93ae-881ef10cced3.rna_seq.transcriptome.gdc_realn.bam 10492096869 BAM transcriptome 901b8458-7e85-497d-b149-dfa28df1e048 995e4b603bd8fe6f842b35754d430de0 hg38 Primary Tumor C3L-01883-01 -C3L-01883.WGS.A C3L-01883 SAR WGS tissue_normal CPT0092390013 CPT0092390013.WholeGenome.RP-1303.bam 62453015839 BAM NA 1dfdb1df-5928-4f0d-9dd9-6a2798220137 8f57cd264022d7ab3de9fcea7f7830e0 hg19 Solid Tissue Normal C3L-01883-06 -C3L-01883.WGS.A.hg38 C3L-01883 SAR WGS tissue_normal CPT0092390013 4c15fdab-3a10-41d6-b349-36d56cb09d01_wgs_gdc_realn.bam 90311747886 BAM NA da59eeaf-573d-41a1-af7a-64c4536bcc63 687e47482e8ce3d1d2a21670a41676e9 hg38 Solid Tissue Normal C3L-01883-06 -C3L-01883.WGS.N C3L-01883 SAR WGS blood_normal CPT0093780002 CPT0093780002.WholeGenome.RP-1303.bam 56228529791 BAM NA 70fea0b0-0a4e-48cf-9d17-39b15658ac7f 8f660141bd0260b850e215bc86991932 hg19 Blood Derived Normal C3L-01883-31 -C3L-01883.WGS.N.hg38 C3L-01883 SAR WGS blood_normal CPT0093780002 f4371810-f448-410f-8449-d7191c670c69_wgs_gdc_realn.bam 82352724548 BAM NA b2a5f5ed-32c1-417a-9daa-098a15dcbaca d74ba96c0c8b5e488c5bf96d1184d8c3 hg38 Blood Derived Normal C3L-01883-31 -C3L-01883.WGS.T C3L-01883 SAR WGS tumor CPT0092360009 CPT0092360009.WholeGenome.RP-1303.bam 75108557699 BAM NA f1e59558-24f9-41b1-b866-4e451c9f587f 09796b6e8087f1592db588472e43eda8 hg19 Primary Tumor C3L-01883-01 -C3L-01883.WGS.T.hg38 C3L-01883 SAR WGS tumor CPT0092360009 9fc6735e-a654-4e18-b737-79db50f41de2_wgs_gdc_realn.bam 109978498780 BAM NA c5169111-870f-4e0d-b501-3fb2b034503f 1f8c3d8a49140f1ec2b0c0d444a147fd hg38 Primary Tumor C3L-01883-01 -C3L-01883.WXS.A C3L-01883 SAR WXS tissue_normal CPT0092390013 CPT0092390013.WholeExome.RP-1303.bam 23606344240 BAM NA 45baeee9-be13-458a-b2bf-b8ce8bc5694f c7409d8264ccc02ea3e1be8ea602017c hg19 Solid Tissue Normal C3L-01883-06 -C3L-01883.WXS.A.hg38 C3L-01883 SAR WXS tissue_normal CPT0092390013 4c15fdab-3a10-41d6-b349-36d56cb09d01_wxs_gdc_realn.bam 32346938995 BAM NA 8fd280f1-ca45-4187-8bc5-5218b2da9f6f d2de5ca2c73ff641fa3f4e4dd1f7cd23 hg38 Solid Tissue Normal C3L-01883-06 -C3L-01883.WXS.N C3L-01883 SAR WXS blood_normal CPT0093780002 CPT0093780002.WholeExome.RP-1303.bam 36705746846 BAM NA 908c39d1-b778-4b34-87e5-e7599241ef70 b954daeb9e3d826c5bef3fdbfe6915dc hg19 Blood Derived Normal C3L-01883-31 -C3L-01883.WXS.N.hg38 C3L-01883 SAR WXS blood_normal CPT0093780002 f4371810-f448-410f-8449-d7191c670c69_wxs_gdc_realn.bam 49426864790 BAM NA 6386dbf1-106d-4ce4-80b6-b6f665329a06 0b8dbc895fc887beb35c9bb546065baa hg38 Blood Derived Normal C3L-01883-31 -C3L-01883.WXS.T C3L-01883 SAR WXS tumor CPT0092360009 CPT0092360009.WholeExome.RP-1303.bam 32072850290 BAM NA 36d9d481-f110-44ef-bf06-15b1b2aa4ed9 80d98b325b8eae85407f165c6a0c3a64 hg19 Primary Tumor C3L-01883-01 -C3L-01883.WXS.T.hg38 C3L-01883 SAR WXS tumor CPT0092360009 9fc6735e-a654-4e18-b737-79db50f41de2_wxs_gdc_realn.bam 44378885721 BAM NA 76c0e7a5-480a-46d9-9056-620f070b960f 6da9e0c10f9e426e55760d9e3c079d05 hg38 Primary Tumor C3L-01883-01 C3L-01884.MethArray.Green.A C3L-01884 LSCC Methylation Array tissue_normal CPT0104380006 203219670122_R05C01_Grn.idat 13676226 IDAT Green 3b3b7050-dac2-49bc-8f69-f46fcf3ff0f9 278a5ca3b4ceb70e9c52c743fbc6b9e2 NA Solid Tissue Normal C3L-01884-06 C3L-01884.MethArray.Green.T C3L-01884 LSCC Methylation Array tumor CPT0104360011 203219720211_R05C01_Grn.idat 13676246 IDAT Green 73575268-aacc-4d39-94f1-5b5c893f9e89 f79dc5ac83f4d7c98cbf6276ba903277 NA Primary Tumor C3L-01884-02 C3L-01884.MethArray.Red.A C3L-01884 LSCC Methylation Array tissue_normal CPT0104380006 203219670122_R05C01_Red.idat 13676226 IDAT Red c96528d5-45a2-445a-be4c-56166ed42320 9a1df26d79a69b56dc29f497d2e32fbb NA Solid Tissue Normal C3L-01884-06 @@ -9499,6 +9067,8 @@ C3L-01953.RNA-Seq.genomic.T.hg38 C3L-01953 CCRCC RNA-Seq tumor CPT0389860009 40a C3L-01953.RNA-Seq.R1.T C3L-01953 CCRCC RNA-Seq tumor CPT0389860009 210105_UNC32-K00270_0269_BHKN5MBBXY_TACCGAGG-CCTGAACT_S4_L001_R1_001.fastq.gz 4046894466 FASTQ NA c6c161f7-0723-4a50-ae25-7fd30c277842 19e9f466177c3efc508f7f87c2984892 NA Primary Tumor C3L-01953-01 C3L-01953.RNA-Seq.R2.T C3L-01953 CCRCC RNA-Seq tumor CPT0389860009 210105_UNC32-K00270_0269_BHKN5MBBXY_TACCGAGG-CCTGAACT_S4_L001_R2_001.fastq.gz 4687825641 FASTQ NA df994857-d183-4299-8120-f79f0f49d65b 41ee0b0038c1bee5dae4785153c7880a NA Primary Tumor C3L-01953-01 C3L-01953.RNA-Seq.transcriptome.T.hg38 C3L-01953 CCRCC RNA-Seq tumor CPT0389860009 40a2854d-cfda-4ee5-bc4f-4f9dc3759267.rna_seq.transcriptome.gdc_realn.bam 12282526354 BAM transcriptome 37f421a0-a5c1-465d-ad1a-faab75e940d3 df705c33a8314e024578b3050d9969ef hg38 Primary Tumor C3L-01953-01 +C3L-01953.scRNA-Seq.R1.T C3L-01953 CCRCC scRNA-Seq tumor CPT0389860004 20220127_WUSTL_TWFU-CPT0389860004-Y1N1Z1_1Bn1_1_AAGATTGGAT+AGCGGGATTT_S3_L003_R1_001.fastq.gz 7360193697 FASTQ NA 922c40e4-ec33-448f-809f-1ca0014ed955 d8d2d87458c989a9bcdc758afd682e26 NA Primary Tumor C3L-01953-01 +C3L-01953.scRNA-Seq.R2.T C3L-01953 CCRCC scRNA-Seq tumor CPT0389860004 20220127_WUSTL_TWFU-CPT0389860004-Y1N1Z1_1Bn1_1_AAGATTGGAT+AGCGGGATTT_S3_L003_R2_001.fastq.gz 25768579998 FASTQ NA 15d0b6de-9266-4945-a12b-792e1f1a1324 96b85fed617368af64446fbc1e28ca4a NA Primary Tumor C3L-01953-01 C3L-01953.WGS.N C3L-01953 CCRCC WGS blood_normal CPT0389890002 CPT0389890002.WholeGenome.RP-2158.bam 24317435491 BAM NA 55eab932-5116-4113-b926-0efad3c05d3b 02d455349dc8c7aeb14ef8aee8f7413d hg19 Blood Derived Normal C3L-01953-31 C3L-01953.WGS.N.hg38 C3L-01953 CCRCC WGS blood_normal CPT0389890002 3cb5aaf6-03d9-4719-abde-4112902ed551_wgs_gdc_realn.bam 74701967279 BAM NA 4911fc07-7453-4114-9e31-8f1dbd44e011 692eb62bade20d5934b5c85e61a1a5ee hg38 Blood Derived Normal C3L-01953-31 C3L-01953.WGS.T C3L-01953 CCRCC WGS tumor CPT0389860006 CPT0389860006.WholeGenome.RP-2158.bam 26360311209 BAM NA 4498028a-bc11-4d4b-8946-2dae351f9681 39e9a204114370658c170d2030cb6e23 hg19 Primary Tumor C3L-01953-01 @@ -10049,6 +9619,7 @@ C3L-02132.WGS.Nbc C3L-02132 AML WGS buccal_normal CPT0166490003 CPT0166490003.Wh C3L-02132.WGS.Nbc.hg38 C3L-02132 AML WGS buccal_normal CPT0166490003 baa4fc21-86c9-493d-bf8c-a097720cf807_wgs_gdc_realn.bam 95512500931 BAM NA 8daf64b3-8a34-4191-a33e-4b6b6c38592f 565abfdbfa1c7e3db7d685e66a3d3c86 hg38 Buccal Cell Normal C3L-02132-51,C3L-02132-52,C3L-02132-53 C3L-02132.WGS.Tbm C3L-02132 AML WGS tumor_bone_marrow CPT0166390002_1 CPT0166390002_1.WholeGenome.RP-1303.bam 69862755075 BAM NA 520e8c0a-2acb-4f74-8f27-2a4fa497a7af 493a63ed96e40162b986c089eb4bee69 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-02132-54 C3L-02132.WGS.Tbm C3L-02132 AML WGS tumor_bone_marrow CPT0166390002 CPT0166390002.WholeGenome.RP-1303.bam 26137683857 BAM NA 37fa043b-64db-419d-8042-713e5097c910 01452d76f9db936e33ba2d56ed65e014 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-02132-54 +C3L-02132.WGS.Tbm.hg38 C3L-02132 AML WGS tumor_bone_marrow CPT0166390002_1 3de89c45-6ec1-4509-b9e8-6a3e8d874eac_wgs_gdc_realn.bam 103302272675 BAM NA 78c5577f-05e9-46c6-9376-5ee607145665 0c7c44a8f580fa2bc655edd3300fc34f hg38 Primary Blood Derived Cancer - Bone Marrow C3L-02132-54 C3L-02132.WGS.Tbm.hg38 C3L-02132 AML WGS tumor_bone_marrow CPT0166390002 5ebcb838-b5be-4a97-83ad-ee91f207b385_wgs_gdc_realn.bam 35974705542 BAM NA 85d7287e-1a59-4f46-bb72-b244838ff573 b1f45d0b0240723de5c84c101a51eb53 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-02132-54 C3L-02132.WXS.Nbc C3L-02132 AML WXS buccal_normal CPT0166490003 CPT0166490003.WholeExome.RP-1303.bam 25321497026 BAM NA 2615c697-f758-4edf-96f4-2fd271a22c61 1f388eb31ac56025f506c6ed2f8f4646 hg19 Buccal Cell Normal C3L-02132-51,C3L-02132-52,C3L-02132-53 C3L-02132.WXS.Nbc.hg38 C3L-02132 AML WXS buccal_normal CPT0166490003 baa4fc21-86c9-493d-bf8c-a097720cf807_wxs_gdc_realn.bam 35166611065 BAM NA 944c53f5-4f80-46ae-ac76-fed39b14b783 9bb72d1a9bc4d15b711981a43ce2f859 hg38 Buccal Cell Normal C3L-02132-51,C3L-02132-52,C3L-02132-53 @@ -11604,6 +11175,8 @@ C3L-02551.RNA-Seq.R2.A C3L-02551 CCRCC RNA-Seq tissue_normal CPT0161540009 19011 C3L-02551.RNA-Seq.R2.T C3L-02551 CCRCC RNA-Seq tumor CPT0161510009 190125_UNC31-K00269_0184_AH3M32BBXY_ACAGTG_S16_L006_R2_001.fastq.gz 3897429232 FASTQ NA 29354421-b9e4-4e98-bdec-82288547acd9 1ea0f3e50cbae7fb0816fff80ea64a3b NA Primary Tumor C3L-02551-01 C3L-02551.RNA-Seq.transcriptome.A.hg38 C3L-02551 CCRCC RNA-Seq tissue_normal CPT0161540009 87185ec9-7aa8-48a5-9dc8-2420a879c178.rna_seq.transcriptome.gdc_realn.bam 11733222965 BAM transcriptome 3541513b-ee89-4b5e-9501-5968bca78a49 dd04a738ce0eb298a6f533f7ccde3885 hg38 Solid Tissue Normal C3L-02551-06 C3L-02551.RNA-Seq.transcriptome.T.hg38 C3L-02551 CCRCC RNA-Seq tumor CPT0161510009 fddf7311-f39a-4be5-a2d7-ec67489594f3.rna_seq.transcriptome.gdc_realn.bam 9881212406 BAM transcriptome 3dc12408-1c1e-4c81-af19-c29f290cb388 3eff552ac3fe9362513ef9b5f1825815 hg38 Primary Tumor C3L-02551-01 +C3L-02551.scRNA-Seq.R1.T C3L-02551 CCRCC scRNA-Seq tumor CPT0161510004 20220404_WUSTL_TWHG-CPT0161510004-Y1N1Z1_1Bmn1_1_TCCGTTGGAT+GCGAGAACGT_S5_L004_R1_001.fastq.gz 6168927560 FASTQ NA f2739b71-d78c-4c17-939d-d87ee2d90fc9 ef533b2a925c530ab56201cdb4904dd4 NA Primary Tumor C3L-02551-01 +C3L-02551.scRNA-Seq.R2.T C3L-02551 CCRCC scRNA-Seq tumor CPT0161510004 20220404_WUSTL_TWHG-CPT0161510004-Y1N1Z1_1Bmn1_1_TCCGTTGGAT+GCGAGAACGT_S5_L004_R2_001.fastq.gz 22567672709 FASTQ NA 28fa6680-7d30-4483-896c-87130f5be35a 398de2f32ab674281d186341c1bbef3e NA Primary Tumor C3L-02551-01 C3L-02551.WGS.A C3L-02551 CCRCC WGS tissue_normal CPT0161540006 CPT0161540006.WholeGenome.RP-1303.bam 77375941138 BAM NA 0c0bacce-441c-4cfc-9b4e-f1217cf96425 c3925804412d0d30eceaf0096522ee69 hg19 Solid Tissue Normal C3L-02551-06 C3L-02551.WGS.A.hg38 C3L-02551 CCRCC WGS tissue_normal CPT0161540006 3e963853-6bb2-4a64-b030-c8072ed444c0_wgs_gdc_realn.bam 113037172321 BAM NA 3bfcb0ad-55a4-4b46-bc88-4970e01c162a 4471251e15b1cefe8ea705d7c4b1bc28 hg38 Solid Tissue Normal C3L-02551-06 C3L-02551.WGS.N C3L-02551 CCRCC WGS blood_normal CPT0162510002 CPT0162510002.WholeGenome.RP-1303.bam 56656702955 BAM NA fc2146b7-d99f-421f-a8f6-5201856a120e 14d82a2e14627cfb87bfb1ab1a255f4b hg19 Blood Derived Normal C3L-02551-31 @@ -13027,6 +12600,10 @@ C3L-02858.RNA-Seq.genomic.T.hg38 C3L-02858 CCRCC RNA-Seq tumor CPT0389160009 5db C3L-02858.RNA-Seq.R1.T C3L-02858 CCRCC RNA-Seq tumor CPT0389160009 210105_UNC32-K00270_0269_BHKN5MBBXY_GGTACCTT-AAGACGTC_S16_L004_R1_001.fastq.gz 3869705493 FASTQ NA 52d3a301-352c-448f-aad0-95a62e05dc6e 7e10c430f87c49bcddc8ff248a47c1fb NA Primary Tumor C3L-02858-01 C3L-02858.RNA-Seq.R2.T C3L-02858 CCRCC RNA-Seq tumor CPT0389160009 210105_UNC32-K00270_0269_BHKN5MBBXY_GGTACCTT-AAGACGTC_S16_L004_R2_001.fastq.gz 4315068548 FASTQ NA 168c8828-aaec-4ae0-9dd6-3b90f6b0972a 787169beb09d846a2719508211c584e7 NA Primary Tumor C3L-02858-01 C3L-02858.RNA-Seq.transcriptome.T.hg38 C3L-02858 CCRCC RNA-Seq tumor CPT0389160009 5db57ced-866c-4242-9e87-2fb1a7097a5c.rna_seq.transcriptome.gdc_realn.bam 10178195314 BAM transcriptome 6d04e6b6-ec5e-4129-bc12-481337b9b59b 33fc2414f5d3ed294ac47a793d6cfb5a hg38 Primary Tumor C3L-02858-01 +C3L-02858.scRNA-Seq.R1.T C3L-02858 CCRCC scRNA-Seq tumor CPT0389160004 20220127_WUSTL_TWFU-CPT0389160004-Y1N1Z1_1Bn1_1_CGTCCACCTG+CATTCATGAC_S2_L003_R1_001.fastq.gz 4217981886 FASTQ NA 9ad559ec-11b2-495d-b35b-b6062981259a ef09102d5ac8e9096915caf7c7772524 NA Primary Tumor C3L-02858-01 +C3L-02858.scRNA-Seq.R1.T C3L-02858 CCRCC scRNA-Seq tumor CPT0389160004 20220127_WUSTL_TWFU-CPT0389160004-Y1N1Z1_1Bn1_1_CGTCCACCTG+CATTCATGAC_S4_L002_R1_001.fastq.gz 4489211288 FASTQ NA 6ff5d52e-c39c-4f31-9e4e-ff7393ff56dc a753a4926fa3fb24de876b9690ec00f2 NA Primary Tumor C3L-02858-01 +C3L-02858.scRNA-Seq.R2.T C3L-02858 CCRCC scRNA-Seq tumor CPT0389160004 20220127_WUSTL_TWFU-CPT0389160004-Y1N1Z1_1Bn1_1_CGTCCACCTG+CATTCATGAC_S2_L003_R2_001.fastq.gz 14539185616 FASTQ NA 0c4fda12-61cc-4a98-ae5e-bb10fea2a063 1165c9ebb8c45483c2f53094d8684da7 NA Primary Tumor C3L-02858-01 +C3L-02858.scRNA-Seq.R2.T C3L-02858 CCRCC scRNA-Seq tumor CPT0389160004 20220127_WUSTL_TWFU-CPT0389160004-Y1N1Z1_1Bn1_1_CGTCCACCTG+CATTCATGAC_S4_L002_R2_001.fastq.gz 15591162519 FASTQ NA aae45fdc-c56a-43cb-96b3-a032d94088ba c1996d22e07505a2c4c9d5d72bc3a6dd NA Primary Tumor C3L-02858-01 C3L-02858.WGS.N C3L-02858 CCRCC WGS blood_normal CPT0389210002 CPT0389210002.WholeGenome.RP-2158.bam 25054454450 BAM NA 58c0c24c-bf68-4ca3-9218-36a0b6e30c3e de3a117e5382accea2c53d2b372e1434 hg19 Blood Derived Normal C3L-02858-31 C3L-02858.WGS.N.hg38 C3L-02858 CCRCC WGS blood_normal CPT0389210002 60184fd8-1ab5-4ec8-8973-9dbd5a359d60_wgs_gdc_realn.bam 76418261666 BAM NA abd46a96-622b-4902-9ac7-afc3318e4ccc 206e482303f2177cdca55e893127a1ae hg38 Blood Derived Normal C3L-02858-31 C3L-02858.WGS.T C3L-02858 CCRCC WGS tumor CPT0389160006 CPT0389160006.WholeGenome.RP-2158.bam 24276047510 BAM NA 2649a862-e3cd-47c4-a2d4-ed2ac9545f03 a91c6a97dfd03ec81dcd18d6b67321bb hg19 Primary Tumor C3L-02858-01 @@ -13939,10 +13516,12 @@ C3L-03308.RNA-Seq.R2.Tbm C3L-03308 AML RNA-Seq tumor_bone_marrow CPT0201560002 1 C3L-03308.RNA-Seq.transcriptome.Tbm.hg38 C3L-03308 AML RNA-Seq tumor_bone_marrow CPT0201560002 02305abc-8083-4f64-9f5f-c73ea7305c38.rna_seq.transcriptome.gdc_realn.bam 9642603748 BAM transcriptome 5fb87a64-20bb-419f-b162-940eb4768e62 06ff47cf2c379faca727a6246dd0cf82 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-03308-55 C3L-03308.WGS.Nbc C3L-03308 AML WGS buccal_normal CPT0201630002_1 CPT0201630002_1.WholeGenome.RP-1303.bam 68138136147 BAM NA bc8e886d-54bf-4641-accb-ebbf1ad63d9c 807e2c69cd4858371a6492c2c238e589 hg19 Buccal Cell Normal C3L-03308-50,C3L-03308-51,C3L-03308-52 C3L-03308.WGS.Nbc C3L-03308 AML WGS buccal_normal CPT0201630002 CPT0201630002.WholeGenome.RP-1303.bam 24596099382 BAM NA 85acc293-6c11-497e-8049-76327f5ec0b0 e0bb0b766ab2ef44625e416031dd9864 hg19 Buccal Cell Normal C3L-03308-50,C3L-03308-51,C3L-03308-52 +C3L-03308.WGS.Nbc.hg38 C3L-03308 AML WGS buccal_normal CPT0201630002_1 476f0761-cd64-4f7e-bad6-db1a1d997d02_wgs_gdc_realn.bam 95794248461 BAM NA 3f006696-9c85-46f6-80cb-a65dd4242e8f 595bbdab35a6b3ea7987bb2ba85d5d38 hg38 Buccal Cell Normal C3L-03308-50,C3L-03308-51,C3L-03308-52 C3L-03308.WGS.Nbc.hg38 C3L-03308 AML WGS buccal_normal CPT0201630002 d3e20335-9964-459f-b475-7572352452cc_wgs_gdc_realn.bam 33707667964 BAM NA 443cebb5-a542-4866-9e67-df805b839012 45247c1120bcbd60c050145d4841a1bf hg38 Buccal Cell Normal C3L-03308-50,C3L-03308-51,C3L-03308-52 C3L-03308.WGS.Tbm C3L-03308 AML WGS tumor_bone_marrow CPT0201550002_1 CPT0201550002_1.WholeGenome.RP-1303.bam 80526632719 BAM NA 45ce3ee1-1993-4b8b-a694-4c00f90d8c79 fd0e933949c6bc9b1f300317268d9e31 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-03308-54 C3L-03308.WGS.Tbm C3L-03308 AML WGS tumor_bone_marrow CPT0201550002 CPT0201550002.WholeGenome.RP-1303.bam 23177226613 BAM NA 831dd319-1f30-4547-b465-65f33299a36c 7ed4ffb7d9bb11d532084d0efeaf558c hg19 Primary Blood Derived Cancer - Bone Marrow C3L-03308-54 C3L-03308.WGS.Tbm.hg38 C3L-03308 AML WGS tumor_bone_marrow CPT0201550002 1489dd25-8419-4035-b058-cbd0c1d93caf_wgs_gdc_realn.bam 32052472043 BAM NA 0853efaa-8886-4b5c-96ce-547b63abbc8f 2b6f623f6d8a4f0da4fa1ec56d040503 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-03308-54 +C3L-03308.WGS.Tbm.hg38 C3L-03308 AML WGS tumor_bone_marrow CPT0201550002_1 73edd824-ca93-4839-a578-85e319e4b18c_wgs_gdc_realn.bam 117015182430 BAM NA 25391a83-7490-48ab-983b-d9df97c1b398 8ea94993ecee621d3feb238ed6a808a5 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-03308-54 C3L-03308.WXS.Nbc C3L-03308 AML WXS buccal_normal CPT0201630002 CPT0201630002.WholeExome.RP-1303.bam 24596099450 BAM NA 5c350146-7466-48a4-949f-f570df1aa3e1 1888a9762a880130611a0180727800d1 hg19 Buccal Cell Normal C3L-03308-50,C3L-03308-51,C3L-03308-52 C3L-03308.WXS.Nbc.hg38 C3L-03308 AML WXS buccal_normal CPT0201630002 d3e20335-9964-459f-b475-7572352452cc_wxs_gdc_realn.bam 33863986000 BAM NA 9ea0ec47-41c9-4b2e-badb-ccfd4979751a 54d599e0a52fac7f3ba86f66a57866be hg38 Buccal Cell Normal C3L-03308-50,C3L-03308-51,C3L-03308-52 C3L-03308.WXS.Tbm C3L-03308 AML WXS tumor_bone_marrow CPT0201550002 CPT0201550002.WholeExome.RP-1303.bam 23177226677 BAM NA 89398d58-6aff-4b44-aee1-b4a1be711054 8a7eae1f421b9e4cc549887e7d14af57 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-03308-54 @@ -14361,6 +13940,7 @@ C3L-03491.RNA-Seq.R2.Tbm C3L-03491 AML RNA-Seq tumor_bone_marrow CPT0201240002 1 C3L-03491.RNA-Seq.transcriptome.Tbm.hg38 C3L-03491 AML RNA-Seq tumor_bone_marrow CPT0201240002 9314c82b-a544-4832-9e82-d69d7cdc9382.rna_seq.transcriptome.gdc_realn.bam 10040901775 BAM transcriptome c03e8eba-4538-4385-a82a-96b685f318cb 98590e29a1e5e1b2e6dfdf317615380d hg38 Primary Blood Derived Cancer - Bone Marrow C3L-03491-62 C3L-03491.WGS.Nbc C3L-03491 AML WGS buccal_normal CPT0201260002_1 CPT0201260002_1.WholeGenome.RP-1303.bam 66764773211 BAM NA fe742c91-96a7-4183-9ee1-d8ddcad6430f f2623d88a46a9cfacbdaba2be0f947be hg19 Buccal Cell Normal C3L-03491-50,C3L-03491-51,C3L-03491-52 C3L-03491.WGS.Nbc C3L-03491 AML WGS buccal_normal CPT0201260002 CPT0201260002.WholeGenome.RP-1303.bam 28153730545 BAM NA 1f5c76aa-379c-48ae-80ca-9096eab3a70b 893db18c95bc1edae49d9d03dd54d94c hg19 Buccal Cell Normal C3L-03491-50,C3L-03491-51,C3L-03491-52 +C3L-03491.WGS.Nbc.hg38 C3L-03491 AML WGS buccal_normal CPT0201260002_1 14d1a6aa-e85e-44de-932b-e4a270c8d1da_wgs_gdc_realn.bam 220987048218 BAM NA 0ae4c8c0-bc44-4cbe-a3c3-04f845701bfb 5edb48dd4f2104442f3461ca557b8459 hg38 Buccal Cell Normal C3L-03491-50,C3L-03491-51,C3L-03491-52 C3L-03491.WGS.Nbc.hg38 C3L-03491 AML WGS buccal_normal CPT0201260002 1ff3c330-46ce-47a5-b4d0-c54341f4f7a5_wgs_gdc_realn.bam 38834048412 BAM NA 5151bfab-e478-4666-a7d5-91cc71758983 7bc6ce6713b05d3a23f678caeede08ce hg38 Buccal Cell Normal C3L-03491-50,C3L-03491-51,C3L-03491-52 C3L-03491.WGS.Tbm C3L-03491 AML WGS tumor_bone_marrow CPT0201160002 CPT0201160002.WholeGenome.RP-1303.bam 94166755555 BAM NA 2678eb89-1dbf-4b9b-bd5d-88d8022848bf 82150d8e80f03d75e25baae7d763e7b5 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-03491-54 C3L-03491.WGS.Tbm.hg38 C3L-03491 AML WGS tumor_bone_marrow CPT0201160002 5b8efbc5-c97f-4232-8b67-88fb0a71d5df_wgs_gdc_realn.bam 139513334059 BAM NA 42b8cc51-9a6d-47ac-b02d-32d608a179cd ba581e635fced7d6ce9a16fa47ca4f1f hg38 Primary Blood Derived Cancer - Bone Marrow C3L-03491-54 @@ -14413,6 +13993,7 @@ C3L-03497.RNA-Seq.R2.Tbm C3L-03497 AML RNA-Seq tumor_bone_marrow CPT0230640002 1 C3L-03497.RNA-Seq.transcriptome.Tbm.hg38 C3L-03497 AML RNA-Seq tumor_bone_marrow CPT0230640002 2cd98f61-2f18-4c84-82ff-be532ce307b9.rna_seq.transcriptome.gdc_realn.bam 11199735671 BAM transcriptome 2ad0618c-0359-45b7-9f49-9c0e1bf38805 433919fdf7c7bb3c04678f7d82b26c1d hg38 Primary Blood Derived Cancer - Bone Marrow C3L-03497-55 C3L-03497.WGS.Nbc C3L-03497 AML WGS buccal_normal CPT0230660001_1 CPT0230660001_1.WholeGenome.RP-1303.bam 72868517834 BAM NA b7827db7-eaab-4e5c-b7dd-fb5178cd7102 940deb66f8a342d1aa8db3183801796d hg19 Buccal Cell Normal C3L-03497-51,C3L-03497-52,C3L-03497-53 C3L-03497.WGS.Nbc C3L-03497 AML WGS buccal_normal CPT0230660001 CPT0230660001.WholeGenome.RP-1303.bam 26983389377 BAM NA 8f24d99e-ba74-4890-b7b2-011ede0f7952 f0fae6f4f178bde896db458f13f03986 hg19 Buccal Cell Normal C3L-03497-51,C3L-03497-52,C3L-03497-53 +C3L-03497.WGS.Nbc.hg38 C3L-03497 AML WGS buccal_normal CPT0230660001_1 a087aaa3-7b60-4e27-991d-9b9d0464ffa5_wgs_gdc_realn.bam 104030462212 BAM NA cba2d435-0d5a-4de9-a3ce-3bb906983089 4c06ea433b291d8b683bda5d70dd23a6 hg38 Buccal Cell Normal C3L-03497-51,C3L-03497-52,C3L-03497-53 C3L-03497.WGS.Nbc.hg38 C3L-03497 AML WGS buccal_normal CPT0230660001 bf771a0d-734e-4a46-a7fb-e8a733e9e17b_wgs_gdc_realn.bam 37146848269 BAM NA 492aa2d8-f3cf-4a7c-beb4-0ba4abdb38bb 5ce3f9a6c8cc01a459fbe384adbaf118 hg38 Buccal Cell Normal C3L-03497-51,C3L-03497-52,C3L-03497-53 C3L-03497.WGS.Tbm C3L-03497 AML WGS tumor_bone_marrow CPT0230630002 CPT0230630002.WholeGenome.RP-1303.bam 64905594415 BAM NA 86c43df0-ed93-4f5e-b4fc-aa9b57102524 16c135744104f79a82ea8a38f165a2d4 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-03497-54 C3L-03497.WGS.Tbm.hg38 C3L-03497 AML WGS tumor_bone_marrow CPT0230630002 450e4b1c-4c7f-445e-91bb-880d0024fa02_wgs_gdc_realn.bam 96779530473 BAM NA 819a71b8-b34d-42de-9fff-e1c948a5ea18 7dadf9e76592abf1cb0b6392ec0968c0 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-03497-54 @@ -14474,58 +14055,6 @@ C3L-03513.RNA-Seq.genomic.A.hg38 C3L-03513 PDA RNA-Seq tissue_normal CPT03551800 C3L-03513.RNA-Seq.R1.A C3L-03513 PDA RNA-Seq tissue_normal CPT0355180006 200731_UNC31-K00269_0286_AHHWJ2BBXY_CAACAATG-CTTCACGG_S6_L002_R1_001.fastq.gz 4012444445 FASTQ NA 30c65fa6-6f8c-41cc-ae25-6089adc93750 472f5d53e2220e0541d3fd3aef11257f NA Solid Tissue Normal C3L-03513-01 C3L-03513.RNA-Seq.R2.A C3L-03513 PDA RNA-Seq tissue_normal CPT0355180006 200731_UNC31-K00269_0286_AHHWJ2BBXY_CAACAATG-CTTCACGG_S6_L002_R2_001.fastq.gz 4410946219 FASTQ NA 4f9e894b-8949-486f-ae58-ee15c1d111bf 054f5b8f4ebef2424a220403067010d8 NA Solid Tissue Normal C3L-03513-01 C3L-03513.RNA-Seq.transcriptome.A.hg38 C3L-03513 PDA RNA-Seq tissue_normal CPT0355180006 c639e759-ca72-4522-94a4-9dc59acf120f.rna_seq.transcriptome.gdc_realn.bam 11357227996 BAM transcriptome c5b8a7dd-7744-4753-bfd3-4aedaa3010eb 6c4057c92e39f607d0571b5911249c21 hg38 Solid Tissue Normal C3L-03513-01 -C3L-03547.MethArray.Green.T C3L-03547 GBM Methylation Array tumor CPT0324550012 204372030024_R03C01_Grn.idat 13677905 IDAT Green 7c9b6d92-8421-4e60-b6b2-898813838938 64cab40ad148f26409e7183d3070a00c NA Primary Tumor C3L-03547-01,C3L-03547-02,C3L-03547-03 -C3L-03547.MethArray.Red.T C3L-03547 GBM Methylation Array tumor CPT0324550012 204372030024_R03C01_Red.idat 13677905 IDAT Red 24a977f4-8fb6-4a87-acc1-4b94eaddabdc 3dec3027b377b23c8d75e9a93477b911 NA Primary Tumor C3L-03547-01,C3L-03547-02,C3L-03547-03 -C3L-03547.miRNA-Seq.T C3L-03547 GBM miRNA-Seq tumor CPT0324550015 201209_UNC32-K00270_0265_AHJ55WBBXY_CACCGG_S7_L006_R1_001.unaln.bam 215790967 BAM NA 1cc58189-1c07-4b61-91d3-b204930e5912 38dc2c41154c0e36d79f55b68bf7f970 NA Primary Tumor C3L-03547-01,C3L-03547-02,C3L-03547-03 -C3L-03547.miRNA-Seq.T.hg38 C3L-03547 GBM miRNA-Seq tumor CPT0324550015 08294d72-8b7e-423f-8452-1d6d5400f26a_mirnaseq_gdc_realn.bam 239638838 BAM NA 4664f246-db36-4c7a-bde4-4e83807abebb c148ccbb851c8d311406f717c52c12ac hg38 Primary Tumor C3L-03547-01,C3L-03547-02,C3L-03547-03 -C3L-03547.RNA-Seq.R1.T C3L-03547 GBM RNA-Seq tumor CPT0324550015 200505_UNC31-K00269_0277_AHGFKNBBXY_CATAGAGT-TGCCACCA_S30_L008_R1_001.fastq.gz 3991761744 FASTQ NA 7e9e1d40-4dbc-4163-800d-8d742fd5951c c81db21cbb761d122e6a64f0434b143b NA Primary Tumor C3L-03547-01,C3L-03547-02,C3L-03547-03 -C3L-03547.RNA-Seq.R2.T C3L-03547 GBM RNA-Seq tumor CPT0324550015 200505_UNC31-K00269_0277_AHGFKNBBXY_CATAGAGT-TGCCACCA_S30_L008_R2_001.fastq.gz 4477396798 FASTQ NA 4015c25b-3b30-4de3-b681-791a20da543e 1485609eb69985a5c7f7e4449e9b1696 NA Primary Tumor C3L-03547-01,C3L-03547-02,C3L-03547-03 -C3L-03547.WGS.N C3L-03547 GBM WGS blood_normal CPT0324640002 CPT0324640002.WholeGenome.RP-2158.bam 25602459451 BAM NA 881f8f3c-93b3-49a2-a591-06d797ad9585 17e7b7c02ef11e1718a95789000a55bc hg19 Blood Derived Normal C3L-03547-31 -C3L-03547.WGS.T C3L-03547 GBM WGS tumor CPT0324550012 CPT0324550012.WholeGenome.RP-2158.bam 25478141739 BAM NA 36e1c8ef-a67a-4e3f-8a3d-477b6a158a39 479966759a7617c2987da314f069a761 hg19 Primary Tumor C3L-03547-01,C3L-03547-02,C3L-03547-03 -C3L-03547.WXS.N C3L-03547 GBM WXS blood_normal CPT0324640002 CPT0324640002.WholeExome.RP-1303.bam 19178957416 BAM NA de366d08-c5aa-41e2-ae0a-76b9c3eb4e4d 4bcc49e021b782659eae141243eb9f34 hg19 Blood Derived Normal C3L-03547-31 -C3L-03547.WXS.T C3L-03547 GBM WXS tumor CPT0324550012 CPT0324550012.WholeExome.RP-1303.bam 23506822452 BAM NA 2772377b-6eea-4266-bf7d-fc1757d869d1 d209e41ab6a0e46d206ef6da5b29364e hg19 Primary Tumor C3L-03547-01,C3L-03547-02,C3L-03547-03 -C3L-03554.MethArray.Green.T C3L-03554 GBM Methylation Array tumor CPT0301020013 204367490084_R01C01_Grn.idat 13677890 IDAT Green 73656aac-a776-41e7-aa2c-9156a1db10d2 16ef6a86f10934b91268da08cf6837f3 NA Primary Tumor C3L-03554-01 -C3L-03554.MethArray.Red.T C3L-03554 GBM Methylation Array tumor CPT0301020013 204367490084_R01C01_Red.idat 13677890 IDAT Red 989acb02-704c-457a-85fd-c1615e3769ab 30bf311db6338d5d351572d4ac9b9f90 NA Primary Tumor C3L-03554-01 -C3L-03554.miRNA-Seq.T C3L-03554 GBM miRNA-Seq tumor CPT0301020009 200513_UNC31-K00269_0278_BHH7Y7BBXY_TCGGCA_S48_L008_R1_001.unaln.bam 174106631 BAM NA 932730cd-4f17-4673-af52-c5481bd7fd19 fe8bd62f1864631a5a4bdca444ded014 NA Primary Tumor C3L-03554-01 -C3L-03554.miRNA-Seq.T.hg38 C3L-03554 GBM miRNA-Seq tumor CPT0301020009 eeff1666-b3f6-4288-bb9a-e853082318bf_mirnaseq_gdc_realn.bam 189236347 BAM NA f40203ef-0fa7-43f7-9b8b-ff28be114656 edb8dfdda1e840eef21e34b74953eac7 hg38 Primary Tumor C3L-03554-01 -C3L-03554.RNA-Seq.R1.T C3L-03554 GBM RNA-Seq tumor CPT0301020009 200218_UNC31-K00269_0266_AHGKHKBBXY_TTGCCTAG-ACCACTTA_S57_L005_R1_001.fastq.gz 3899755735 FASTQ NA 3ecffe17-acc9-4237-87d5-b49163949ae1 f0c9434786f7b2d59f298323aa7f379c NA Primary Tumor C3L-03554-01 -C3L-03554.RNA-Seq.R2.T C3L-03554 GBM RNA-Seq tumor CPT0301020009 200218_UNC31-K00269_0266_AHGKHKBBXY_TTGCCTAG-ACCACTTA_S57_L005_R2_001.fastq.gz 4293118449 FASTQ NA da382358-3321-40ea-9631-b0f9586382bd ec376198699479e338296a8b2b286692 NA Primary Tumor C3L-03554-01 -C3L-03554.WGS.N C3L-03554 GBM WGS blood_normal CPT0301140002 CPT0301140002.WholeGenome.RP-2158.bam 28438834375 BAM NA f296d127-c60b-486d-92d9-8e88f8046a5c f23cb0c1539c6a3e7aedd9bcf6f6ab5f hg19 Blood Derived Normal C3L-03554-31 -C3L-03554.WGS.T C3L-03554 GBM WGS tumor CPT0301020013 CPT0301020013.WholeGenome.RP-2158.bam 26075968988 BAM NA edfdd242-b211-4910-8f6d-f8cc3a8be922 54d8dd9c0436272cb40e3f1afcf6a7ed hg19 Primary Tumor C3L-03554-01 -C3L-03554.WXS.N C3L-03554 GBM WXS blood_normal CPT0301140002 CPT0301140002.WholeExome.RP-1303.bam 16450236377 BAM NA caa25124-d461-4407-84c4-44281ffe18b6 73b1e23918680b38b1c5230b34d2bd5b hg19 Blood Derived Normal C3L-03554-31 -C3L-03554.WXS.T C3L-03554 GBM WXS tumor CPT0301020013 CPT0301020013.WholeExome.RP-1303.bam 22554456023 BAM NA b6ffc099-4c14-4a43-a62f-ae8e692e2570 ef80c430de4e4b852869b2bbb2509e25 hg19 Primary Tumor C3L-03554-01 -C3L-03557.MethArray.Green.T C3L-03557 GBM Methylation Array tumor CPT0324870006 204367490066_R07C01_Grn.idat 13677900 IDAT Green 04c51431-4dce-4f99-b3ef-58c222d5938a 42877f8f9bfe76095d78bd52ae100a6c NA Primary Tumor C3L-03557-05 -C3L-03557.MethArray.Red.T C3L-03557 GBM Methylation Array tumor CPT0324870006 204367490066_R07C01_Red.idat 13677900 IDAT Red 8ace8ca2-8666-4cbc-98ef-145fe7ce060e 7024e79fbf4aef3c7df6fb69cfb32dd1 NA Primary Tumor C3L-03557-05 -C3L-03557.miRNA-Seq.T C3L-03557 GBM miRNA-Seq tumor CPT0324870009 200513_UNC31-K00269_0278_BHH7Y7BBXY_ACTGAT_S25_L008_R1_001.unaln.bam 257577074 BAM NA 054a26bf-435e-4835-9235-12f9c1271a4a 1074c20855bd6cdd87deb6f081263d20 NA Primary Tumor C3L-03557-05 -C3L-03557.miRNA-Seq.T.hg38 C3L-03557 GBM miRNA-Seq tumor CPT0324870009 6c26c40d-7d6b-461f-851b-bf23d0a1a5e4_mirnaseq_gdc_realn.bam 289913765 BAM NA f8d96186-de3b-4573-b595-552c183c7b65 d3ee3eef6c4c01829439cd4cdeec7522 hg38 Primary Tumor C3L-03557-05 -C3L-03557.RNA-Seq.R1.T C3L-03557 GBM RNA-Seq tumor CPT0324870009 200505_UNC31-K00269_0277_AHGFKNBBXY_CAATTAAC-CGAGATAT_S26_L007_R1_001.fastq.gz 3467165766 FASTQ NA f757407c-6345-4a7f-b3eb-d1e7062dc6ed 6bf1f485e464e1caaceecb5e27f13213 NA Primary Tumor C3L-03557-05 -C3L-03557.RNA-Seq.R2.T C3L-03557 GBM RNA-Seq tumor CPT0324870009 200505_UNC31-K00269_0277_AHGFKNBBXY_CAATTAAC-CGAGATAT_S26_L007_R2_001.fastq.gz 3814209403 FASTQ NA 4c4e0d47-d00e-4ab7-a4b5-8144f6cb4a38 022f45850475cad0714272bf71fd139e NA Primary Tumor C3L-03557-05 -C3L-03557.WGS.N C3L-03557 GBM WGS blood_normal CPT0324980002 CPT0324980002.WholeGenome.RP-2158.bam 26883092391 BAM NA 80b37c1a-a0cb-4de3-b680-b7349bf80aab 3b54e6f0e1955b0e96b597927d0992b8 hg19 Blood Derived Normal C3L-03557-31 -C3L-03557.WGS.T C3L-03557 GBM WGS tumor CPT0324870006 CPT0324870006.WholeGenome.RP-2158.bam 25136506176 BAM NA 37350133-a637-4dc2-b959-aa4ff26b6db3 0e3fb081da0e2f277f6d64901646f83d hg19 Primary Tumor C3L-03557-05 -C3L-03557.WXS.N C3L-03557 GBM WXS blood_normal CPT0324980002 CPT0324980002.WholeExome.RP-1303.bam 21448562649 BAM NA cd818876-b369-4bbd-808d-40e74f6102bf 81aaaf0e171b63136795d533a477907a hg19 Blood Derived Normal C3L-03557-31 -C3L-03557.WXS.T C3L-03557 GBM WXS tumor CPT0324870006 CPT0324870006.WholeExome.RP-1303.bam 44227197517 BAM NA 7b87ddd0-0660-46b6-8537-a8353b5fce92 452188fd1e0b499449196ff83f08a824 hg19 Primary Tumor C3L-03557-05 -C3L-03557.WXS.T.hg38 C3L-03557 GBM WXS tumor CPT0324870006 3cb618f7-5309-46e6-bf28-f72612bb8a24_wxs_gdc_realn.bam 59821018596 BAM NA 78d9685c-2741-4441-8291-bc9273bb5e40 cf1ee6d1e854f4a0117af3e821d64672 hg38 Primary Tumor C3L-03557-05 -C3L-03559.MethArray.Green.T C3L-03559 GBM Methylation Array tumor CPT0325020006 204367470132_R06C01_Grn.idat 13677880 IDAT Green 1c35efb4-6421-42c8-95c9-4af73220f715 7dac5a51aa30f1d55def3596981a0526 NA Primary Tumor C3L-03559-03 -C3L-03559.MethArray.Red.T C3L-03559 GBM Methylation Array tumor CPT0325020006 204367470132_R06C01_Red.idat 13677880 IDAT Red a20a27d6-19b0-47d5-b6d2-e481ef758795 9dc46cafd084075cc69a054e99340a4b NA Primary Tumor C3L-03559-03 -C3L-03559.miRNA-Seq.T C3L-03559 GBM miRNA-Seq tumor CPT0325020009 200513_UNC31-K00269_0278_BHH7Y7BBXY_ATGAGC_S26_L008_R1_001.unaln.bam 173690875 BAM NA d3969466-da2b-48cb-921a-454fb47fc6d5 68ccac65346454894d7fbd52df751a2f NA Primary Tumor C3L-03559-03 -C3L-03559.miRNA-Seq.T.hg38 C3L-03559 GBM miRNA-Seq tumor CPT0325020009 2cf44df8-8374-4c17-9114-2d4bfeec505a_mirnaseq_gdc_realn.bam 194480451 BAM NA 02249172-3d82-4e5a-b8e1-3abff3fe2f5a 793acf9f1dba99806f52b1468a601307 hg38 Primary Tumor C3L-03559-03 -C3L-03559.RNA-Seq.R1.T C3L-03559 GBM RNA-Seq tumor CPT0325020009 200505_UNC31-K00269_0277_AHGFKNBBXY_TGGCCGGT-TAGAGCGC_S28_L007_R1_001.fastq.gz 4283684848 FASTQ NA b7fe5718-d6a9-4141-a694-92ea00086026 7e63accebca335aeeda151d46ada2358 NA Primary Tumor C3L-03559-03 -C3L-03559.RNA-Seq.R2.T C3L-03559 GBM RNA-Seq tumor CPT0325020009 200505_UNC31-K00269_0277_AHGFKNBBXY_TGGCCGGT-TAGAGCGC_S28_L007_R2_001.fastq.gz 4826363865 FASTQ NA 7a894735-c289-4136-aafa-d72edb275143 ba0dd7458045ce6457d2d8e680d040ee NA Primary Tumor C3L-03559-03 -C3L-03559.WGS.N C3L-03559 GBM WGS blood_normal CPT0325150002 CPT0325150002.WholeGenome.RP-2158.bam 22612865776 BAM NA de4df845-6738-4a7f-8e53-fad12668cc6a 15bad7778672f3e1d3184897a47da52c hg19 Blood Derived Normal C3L-03559-31 -C3L-03559.WGS.T C3L-03559 GBM WGS tumor CPT0325020006 CPT0325020006.WholeGenome.RP-2158.bam 23774365276 BAM NA 8b8714f9-c726-4065-81ae-9810358794dd 311fa704d92a0a41947e8fdddad2fa14 hg19 Primary Tumor C3L-03559-03 -C3L-03559.WXS.N C3L-03559 GBM WXS blood_normal CPT0325150002 CPT0325150002.WholeExome.RP-1303.bam 18968957435 BAM NA c36db34f-b4f2-426e-8cec-5750503ce384 1a6117e4d7366b61f9ea80f456fe89f3 hg19 Blood Derived Normal C3L-03559-31 -C3L-03559.WXS.T C3L-03559 GBM WXS tumor CPT0325020006 CPT0325020006.WholeExome.RP-1303.bam 50983463565 BAM NA 861962ca-4ed2-451f-91e7-1bbe41af9e37 5caaff179c7d049188d52f956924c667 hg19 Primary Tumor C3L-03559-03 -C3L-03559.WXS.T.hg38 C3L-03559 GBM WXS tumor CPT0325020006 99be14a0-bc59-4c38-9d16-c8e51f1e4232_wxs_gdc_realn.bam 70717793909 BAM NA 5fef31b5-7309-4654-8eee-37c509b270dd d9f7b2034ba61a76f4d6d30550d5ec5d hg38 Primary Tumor C3L-03559-03 -C3L-03588.MethArray.Green.T C3L-03588 GBM Methylation Array tumor CPT0300710006 204372030079_R06C01_Grn.idat 13677880 IDAT Green 99cbf7c9-d20c-4694-97e1-1abd3bae1bb3 54220557de152e1ea10808b91fbee2ca NA Primary Tumor C3L-03588-02 -C3L-03588.MethArray.Red.T C3L-03588 GBM Methylation Array tumor CPT0300710006 204372030079_R06C01_Red.idat 13677880 IDAT Red 28c3c2c9-dc50-489d-81cc-80bc5b939110 c64982e6917422599217a7789be212cf NA Primary Tumor C3L-03588-02 -C3L-03588.miRNA-Seq.T C3L-03588 GBM miRNA-Seq tumor CPT0300710009 200513_UNC31-K00269_0278_BHH7Y7BBXY_TATAAT_S44_L008_R1_001.unaln.bam 331581993 BAM NA 7f0d5dbb-4f41-4100-83d9-7cf9a2db48a2 1741a844b13437534539dff5d87bb352 NA Primary Tumor C3L-03588-02 -C3L-03588.miRNA-Seq.T.hg38 C3L-03588 GBM miRNA-Seq tumor CPT0300710009 5d2bae2c-2da7-4386-b6ce-aebb617ec002_mirnaseq_gdc_realn.bam 364147390 BAM NA 030643d3-8cad-49d5-9391-f833d17079d1 43879dd371b3548e711ea66bf7be7f6b hg38 Primary Tumor C3L-03588-02 -C3L-03588.RNA-Seq.R1.T C3L-03588 GBM RNA-Seq tumor CPT0300710009 200218_UNC31-K00269_0266_AHGKHKBBXY_GATCTATC-ATGAGGCT_S63_L007_R1_001.fastq.gz 3716042268 FASTQ NA 125972b5-4526-4f1e-b0be-eff967b1ed1e ccf6b030eec492338338525fcfcec22b NA Primary Tumor C3L-03588-02 -C3L-03588.RNA-Seq.R2.T C3L-03588 GBM RNA-Seq tumor CPT0300710009 200218_UNC31-K00269_0266_AHGKHKBBXY_GATCTATC-ATGAGGCT_S63_L007_R2_001.fastq.gz 3951154756 FASTQ NA 3e05990f-cdf7-43cc-a667-dd6b824ea2be e02ffdc246bba08cc370237ce60d315c NA Primary Tumor C3L-03588-02 -C3L-03588.WGS.N C3L-03588 GBM WGS blood_normal CPT0301000002 CPT0301000002.WholeGenome.RP-2158.bam 23149289719 BAM NA 279eace3-b8de-4e44-8c71-2999ace91236 78bba36189509a74af0f7ca0f86a0795 hg19 Blood Derived Normal C3L-03588-31 -C3L-03588.WGS.T C3L-03588 GBM WGS tumor CPT0300710006 CPT0300710006.WholeGenome.RP-2158.bam 23183373339 BAM NA a14c6b55-f1c2-4a74-b6f0-293109bf76c7 553d022d2d466b15e1d096ba12d705c6 hg19 Primary Tumor C3L-03588-02 -C3L-03588.WXS.N C3L-03588 GBM WXS blood_normal CPT0301000002 CPT0301000002.WholeExome.RP-1303.bam 19500634033 BAM NA 6148011a-c871-4864-bcfb-1c9d7b969ca7 29ce7c0ee5713ff66da082cdfef251b3 hg19 Blood Derived Normal C3L-03588-31 -C3L-03588.WXS.T C3L-03588 GBM WXS tumor CPT0300710006 CPT0300710006.WholeExome.RP-1303.bam 17457555913 BAM NA 00724135-4de6-4e03-a3fd-1211cf4bb9a5 e99915042315835c5ca83a5769bca02b hg19 Primary Tumor C3L-03588-02 C3L-03589.MethArray.Green.T C3L-03589 UCEC Methylation Array tumor CPT0188710006 203561450018_R05C01_Grn.idat 13676216 IDAT Green 81868de6-a7e2-4065-912e-e60476cdaf03 be844a74fbcc9bb2f8d5016b0d3d15ca NA Primary Tumor C3L-03589-03 C3L-03589.MethArray.Red.T C3L-03589 UCEC Methylation Array tumor CPT0188710006 203561450018_R05C01_Red.idat 13676216 IDAT Red 05539ace-57f4-48e9-9992-5e70cb27c15d f10b7834a4e90564c19c2956172fb08d NA Primary Tumor C3L-03589-03 C3L-03589.miRNA-Seq.T C3L-03589 UCEC miRNA-Seq tumor CPT0188710009 190508_UNC31-K00269_0215_BH7FYKBBXY_CAACTA_S29_L004_R1_001.unaln.bam 238475972 BAM NA 547dd03e-764e-403b-850d-5ffde2ae0db2 da3b729d2256992e41d431b769712487 NA Primary Tumor C3L-03589-03 @@ -17049,59 +16578,6 @@ C3L-04808.WXS.N C3L-04808 LSCC WXS blood_normal CPT0298360002 CPT0298360002.Whol C3L-04808.WXS.N.hg38 C3L-04808 LSCC WXS blood_normal CPT0298360002 c15ee2a6-727a-430d-b7c0-61dc832d0dc9_wxs_gdc_realn.bam 30061205588 BAM NA 6e147259-ebe3-49f3-8352-fa450a059630 a28cef33d9693496fef5a2fe4babd6c8 hg38 Blood Derived Normal C3L-04808-32 C3L-04808.WXS.T C3L-04808 LSCC WXS tumor CPT0298280006 CPT0298280006.WholeExome.RP-1303.bam 33141914649 BAM NA 5f9c8604-7238-485a-9b95-4cdc6cbc499c 6248e1c18d1f9706b3056f32e4d29c38 hg19 Primary Tumor C3L-04808-01 C3L-04808.WXS.T.hg38 C3L-04808 LSCC WXS tumor CPT0298280006 d9661c5a-e609-4b7a-8ddf-03ee137c8ab6_wxs_gdc_realn.bam 44530671372 BAM NA dc233d63-d074-4c61-862a-486ccb88bc73 ab805bac50d82f508cd755900751126d hg38 Primary Tumor C3L-04808-01 -C3L-04815.MethArray.Green.T C3L-04815 GBM Methylation Array tumor CPT0327090006 204372030087_R06C01_Grn.idat 13677880 IDAT Green 9d664202-241e-417e-bb35-de2aa6b8e590 e3e7016298256312aa4972d8052ad334 NA Primary Tumor C3L-04815-05 -C3L-04815.MethArray.Red.T C3L-04815 GBM Methylation Array tumor CPT0327090006 204372030087_R06C01_Red.idat 13677880 IDAT Red 18b0a525-b6c9-4f5d-a5b5-ce09c32ecc29 30ce5c3b87c54ab1248418e8d7161194 NA Primary Tumor C3L-04815-05 -C3L-04815.miRNA-Seq.T C3L-04815 GBM miRNA-Seq tumor CPT0327090008 201209_UNC32-K00270_0265_AHJ55WBBXY_ATTCCT_S4_L006_R1_001.unaln.bam 206128168 BAM NA bd2663b8-b86d-4fcd-836f-c143a0d0a404 13b87e81f9b7692500adf2603158fbc2 NA Primary Tumor C3L-04815-05 -C3L-04815.miRNA-Seq.T.hg38 C3L-04815 GBM miRNA-Seq tumor CPT0327090008 1109bbec-d535-4615-a731-41df9b9885b8_mirnaseq_gdc_realn.bam 234959553 BAM NA 82abe514-cbfb-412c-80b7-8f400617119c 5e86376a8107d8fca983c8beb4bd9fb5 hg38 Primary Tumor C3L-04815-05 -C3L-04815.RNA-Seq.R1.T C3L-04815 GBM RNA-Seq tumor CPT0327090008 200505_UNC31-K00269_0277_AHGFKNBBXY_AGTACTCC-AACCTGTT_S25_L007_R1_001.fastq.gz 3282529622 FASTQ NA 98af91ad-d44e-408c-916f-7556d400b63f ef76157ddea90b9f2632df8476742ffd NA Primary Tumor C3L-04815-05 -C3L-04815.RNA-Seq.R2.T C3L-04815 GBM RNA-Seq tumor CPT0327090008 200505_UNC31-K00269_0277_AHGFKNBBXY_AGTACTCC-AACCTGTT_S25_L007_R2_001.fastq.gz 3726412542 FASTQ NA 949518ac-c6fe-4d94-9aed-e9aa29d99314 a541a424431a9654aeded1dce67f4154 NA Primary Tumor C3L-04815-05 -C3L-04815.WGS.N C3L-04815 GBM WGS blood_normal CPT0327200002 CPT0327200002.WholeGenome.RP-2158.bam 24108701234 BAM NA b5145261-bab8-46be-b48d-8a80b69f34dc 65122f959c4b4e92b0d5e8c347e9637d hg19 Blood Derived Normal C3L-04815-31 -C3L-04815.WGS.T C3L-04815 GBM WGS tumor CPT0327090006 CPT0327090006.WholeGenome.RP-2158.bam 25418013508 BAM NA 611742e4-6936-484e-ac86-9f1ef316f749 67dad132a56c8671f462cdecee9cbde7 hg19 Primary Tumor C3L-04815-05 -C3L-04815.WXS.N C3L-04815 GBM WXS blood_normal CPT0327200002 CPT0327200002.WholeExome.RP-1303.bam 27836915389 BAM NA 67882a3f-48ee-4b68-80bd-55cb703e0c39 7a468c4f2a40fb2c1d22c90880796396 hg19 Blood Derived Normal C3L-04815-31 -C3L-04815.WXS.T C3L-04815 GBM WXS tumor CPT0327090006 CPT0327090006.WholeExome.RP-1303.bam 47856916140 BAM NA e3200c8b-9941-480f-a207-b34acaa190ed 5214f27537a7ce7632cb6a10ec20d4f5 hg19 Primary Tumor C3L-04815-05 -C3L-04815.WXS.T.hg38 C3L-04815 GBM WXS tumor CPT0327090006 ebde21f2-1cac-42b7-b6c0-34eb3da0d393_wxs_gdc_realn.bam 67580380935 BAM NA 139c742c-d922-4818-9752-dba90e3663b6 df451059b74b8ff8e19f6994cacd9c6b hg38 Primary Tumor C3L-04815-05 -C3L-04817.MethArray.Green.T C3L-04817 GBM Methylation Array tumor CPT0327250006 204367470132_R04C01_Grn.idat 13677880 IDAT Green cc3fc42b-e851-466c-a64b-9216ae3568d6 8b98ed092cbadb8cdfd555ffdc4b05e4 NA Primary Tumor C3L-04817-04 -C3L-04817.MethArray.Red.T C3L-04817 GBM Methylation Array tumor CPT0327250006 204367470132_R04C01_Red.idat 13677880 IDAT Red 9d14ebcc-3f85-49bf-8c9b-76ab87d03125 0c72455d675bbc09bb07ef404c3f9c85 NA Primary Tumor C3L-04817-04 -C3L-04817.miRNA-Seq.T C3L-04817 GBM miRNA-Seq tumor CPT0327250009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CAGGCG_S33_L008_R1_001.unaln.bam 163277644 BAM NA 77519768-82d7-4334-a1a8-5c2611a4b841 63f9a0ec6a534f7678e3315bf6721fb9 NA Primary Tumor C3L-04817-04 -C3L-04817.miRNA-Seq.T.hg38 C3L-04817 GBM miRNA-Seq tumor CPT0327250009 61ae4291-409f-4029-8316-597f87d114d6_mirnaseq_gdc_realn.bam 183101008 BAM NA 772cdde7-6d0e-4925-a789-f8c75bdf21bf 89a80cf59536cd9924b2697ddecacf08 hg38 Primary Tumor C3L-04817-04 -C3L-04817.RNA-Seq.R1.T C3L-04817 GBM RNA-Seq tumor CPT0327250009 200518_UNC32-K00270_0247_AHH573BBXY_AACTGTAG-ACGCCGCA_S25_L003_R1_001.fastq.gz 6357599724 FASTQ NA e3577dd8-984f-486c-9d9e-ce8d4e8889be 3f205f423ee42f5cb7ec0c0756d56af0 NA Primary Tumor C3L-04817-04 -C3L-04817.RNA-Seq.R2.T C3L-04817 GBM RNA-Seq tumor CPT0327250009 200518_UNC32-K00270_0247_AHH573BBXY_AACTGTAG-ACGCCGCA_S25_L003_R2_001.fastq.gz 7503411381 FASTQ NA 0a870ed5-d914-42cf-879c-b2d81c020910 d56b6909bd4e21cbeb0f546ab16317db NA Primary Tumor C3L-04817-04 -C3L-04817.WGS.N C3L-04817 GBM WGS blood_normal CPT0329360002 CPT0329360002.WholeGenome.RP-2158.bam 20589037834 BAM NA fce9f8b5-18c4-4bb2-b9a1-0db673d19d23 47e2c53920b883ff6bd05b8fe539628e hg19 Blood Derived Normal C3L-04817-31 -C3L-04817.WGS.T C3L-04817 GBM WGS tumor CPT0327250006 CPT0327250006.WholeGenome.RP-2158.bam 27764067629 BAM NA 8877e9f0-19a1-429d-aa4d-e8a7807d6dfb a7d1929ca54cf9d077d20418775cb11d hg19 Primary Tumor C3L-04817-04 -C3L-04817.WXS.N C3L-04817 GBM WXS blood_normal CPT0329360002 CPT0329360002.WholeExome.RP-1303.bam 19363881942 BAM NA 463fcf46-a349-4597-ba68-97403dfb1331 1a6e49e7f423297f8c96a7620db27906 hg19 Blood Derived Normal C3L-04817-31 -C3L-04817.WXS.T C3L-04817 GBM WXS tumor CPT0327250006 CPT0327250006.WholeExome.RP-1303.bam 18690359998 BAM NA 223a132e-efe6-421b-a52e-756dfaba6778 d29e390ee95d9f1ee5d862ce3145fd90 hg19 Primary Tumor C3L-04817-04 -C3L-04819.MethArray.Green.T C3L-04819 GBM Methylation Array tumor CPT0300330007 204372030023_R02C01_Grn.idat 13677895 IDAT Green 41e46af0-305d-4723-8754-aedc383d733f 1462dd6283f67e19d6ca052bc7295487 NA Primary Tumor C3L-04819-01,C3L-04819-02 -C3L-04819.MethArray.Red.T C3L-04819 GBM Methylation Array tumor CPT0300330007 204372030023_R02C01_Red.idat 13677895 IDAT Red cdc77029-fd84-4da7-9f76-56a37bfe9512 13c26ab41e8464032a3c5aa07215faed NA Primary Tumor C3L-04819-01,C3L-04819-02 -C3L-04819.miRNA-Seq.T C3L-04819 GBM miRNA-Seq tumor CPT0300330010 200513_UNC31-K00269_0278_BHH7Y7BBXY_TCGAAG_S47_L008_R1_001.unaln.bam 247622064 BAM NA 1ed49b4d-2fb4-4621-b669-2124ae89ded9 e4c306c4d3aa363b0cce6113b9a32bee NA Primary Tumor C3L-04819-01,C3L-04819-02 -C3L-04819.miRNA-Seq.T.hg38 C3L-04819 GBM miRNA-Seq tumor CPT0300330010 239ada33-a818-423a-898e-2b2e1d0253a2_mirnaseq_gdc_realn.bam 282104185 BAM NA 7bed5e55-5d38-44d8-af0b-5f6b97668b63 4949736b2a37b618809e3511ca82712a hg38 Primary Tumor C3L-04819-01,C3L-04819-02 -C3L-04819.RNA-Seq.R1.T C3L-04819 GBM RNA-Seq tumor CPT0300330010 200218_UNC31-K00269_0266_AHGKHKBBXY_TAAGGTCA-TGTCGTAG_S56_L005_R1_001.fastq.gz 4374501298 FASTQ NA 083859d3-282e-4035-998d-83a4f425f9cf ccee4b255c9193e6fcbb77c7f4f0b478 NA Primary Tumor C3L-04819-01,C3L-04819-02 -C3L-04819.RNA-Seq.R2.T C3L-04819 GBM RNA-Seq tumor CPT0300330010 200218_UNC31-K00269_0266_AHGKHKBBXY_TAAGGTCA-TGTCGTAG_S56_L005_R2_001.fastq.gz 4754062682 FASTQ NA 8e96b951-e574-4ab7-af77-0291721c10f2 429887ff2f395a865a4dd62a6b1c2e9d NA Primary Tumor C3L-04819-01,C3L-04819-02 -C3L-04819.WGS.N C3L-04819 GBM WGS blood_normal CPT0300680002 CPT0300680002.WholeGenome.RP-2158.bam 22538740543 BAM NA 7b5a2ccc-a643-4bbc-8361-cd0588cbabf2 fe3f191a513941aeb2eb93ab75be665e hg19 Blood Derived Normal C3L-04819-31 -C3L-04819.WGS.T C3L-04819 GBM WGS tumor CPT0300330007 CPT0300330007.WholeGenome.RP-2158.bam 28307882084 BAM NA 082407db-56e0-4085-8cbf-0dedd4e9f08b 623e62e06866e776fcb58d2e9ad661eb hg19 Primary Tumor C3L-04819-01,C3L-04819-02 -C3L-04819.WXS.N C3L-04819 GBM WXS blood_normal CPT0300680002 CPT0300680002.WholeExome.RP-1303.bam 30965760624 BAM NA b77d19d6-2b7e-4526-9ab5-f27dc29e73b0 9ff53535bfccf3e84d7204183ac5bfa2 hg19 Blood Derived Normal C3L-04819-31 -C3L-04819.WXS.T C3L-04819 GBM WXS tumor CPT0300330007 CPT0300330007.WholeExome.RP-1303.bam 21465542038 BAM NA bfe05ddb-9e38-4187-a6e6-f95f72e7264c 52de2f4c1bff22d1ea757660df45837d hg19 Primary Tumor C3L-04819-01,C3L-04819-02 -C3L-04838.MethArray.Green.T C3L-04838 GBM Methylation Array tumor CPT0329380007 204367470131_R06C01_Grn.idat 13677880 IDAT Green cf3fa65e-9eb5-408b-aa66-d84c84fac2c5 51e114e3d6ac3c6e64b5dd48c549349e NA Primary Tumor C3L-04838-01,C3L-04838-02 -C3L-04838.MethArray.Red.T C3L-04838 GBM Methylation Array tumor CPT0329380007 204367470131_R06C01_Red.idat 13677880 IDAT Red 9fe20c53-dada-4882-bcad-4eec1eca32be fec28822bf7789eb65d60eba8471de02 NA Primary Tumor C3L-04838-01,C3L-04838-02 -C3L-04838.miRNA-Seq.T C3L-04838 GBM miRNA-Seq tumor CPT0329380010 200513_UNC31-K00269_0278_BHH7Y7BBXY_CAAAAG_S28_L008_R1_001.unaln.bam 144603851 BAM NA 970d261c-e984-48fe-99e8-616c64e50550 aa65755fa9dc8c2a8daa98d48e527e67 NA Primary Tumor C3L-04838-01,C3L-04838-02 -C3L-04838.miRNA-Seq.T.hg38 C3L-04838 GBM miRNA-Seq tumor CPT0329380010 f975781b-04eb-4f81-a267-f9efa5d030c4_mirnaseq_gdc_realn.bam 169295647 BAM NA 7e14dc7c-aebc-4648-8c10-41c44173723f 59b3dc9b487800c09de3bbdf20e37920 hg38 Primary Tumor C3L-04838-01,C3L-04838-02 -C3L-04838.RNA-Seq.R1.T C3L-04838 GBM RNA-Seq tumor CPT0329380010 200505_UNC31-K00269_0277_AHGFKNBBXY_GACGTCTT-GGTTCACC_S27_L007_R1_001.fastq.gz 4656797411 FASTQ NA 73658b9b-94b2-4b47-ac91-89ae815b22ae 21a5bd7d90386ac151cca80d002d7b69 NA Primary Tumor C3L-04838-01,C3L-04838-02 -C3L-04838.RNA-Seq.R2.T C3L-04838 GBM RNA-Seq tumor CPT0329380010 200505_UNC31-K00269_0277_AHGFKNBBXY_GACGTCTT-GGTTCACC_S27_L007_R2_001.fastq.gz 5166364306 FASTQ NA 52fafe76-c371-49f2-a86c-366d79d9d5c5 433a11448a74b520978e4630bbe733bc NA Primary Tumor C3L-04838-01,C3L-04838-02 -C3L-04838.WGS.N C3L-04838 GBM WGS blood_normal CPT0329530002 CPT0329530002.WholeGenome.RP-2158.bam 23458458005 BAM NA 085d7478-803f-4bfb-81dc-0af1b087c20d 0d87d5a072f95c78b66896ae823feb84 hg19 Blood Derived Normal C3L-04838-31 -C3L-04838.WGS.T C3L-04838 GBM WGS tumor CPT0329380007 CPT0329380007.WholeGenome.RP-2158.bam 21352974464 BAM NA 628713b5-a9ad-4a0f-bb4b-cd5cd7cc0a27 022832bf799d0a7413bc2fb397ad37ba hg19 Primary Tumor C3L-04838-01,C3L-04838-02 -C3L-04838.WXS.N C3L-04838 GBM WXS blood_normal CPT0329530002 CPT0329530002.WholeExome.RP-1303.bam 43918090236 BAM NA 4be236b8-4702-49df-926e-2511e5fed750 4b4ac036bd983d516e3ec09846182654 hg19 Blood Derived Normal C3L-04838-31 -C3L-04838.WXS.N.hg38 C3L-04838 GBM WXS blood_normal CPT0329530002 bcd4b2e5-85e2-4fbb-98f4-16b66bad3406_wxs_gdc_realn.bam 61168820006 BAM NA 877c67d2-8d50-4078-b366-d5a141e981ac 76f1ebf0b41a513b52824b294bb7fb66 hg38 Blood Derived Normal C3L-04838-31 -C3L-04838.WXS.T C3L-04838 GBM WXS tumor CPT0329380007 CPT0329380007.WholeExome.RP-1303.bam 45378917155 BAM NA a3e1f194-503c-4530-90c3-f4cd2fb848f0 3579f4235916258860539bcd7160e7b5 hg19 Primary Tumor C3L-04838-01,C3L-04838-02 -C3L-04838.WXS.T.hg38 C3L-04838 GBM WXS tumor CPT0329380007 da63e8ce-c0cd-4d3b-92af-cb3daeb8a49d_wxs_gdc_realn.bam 62397345684 BAM NA 8e998288-cf29-40b4-a090-017721dfccf0 f97d069950d48543e5faf83eea6899b8 hg38 Primary Tumor C3L-04838-01,C3L-04838-02 -C3L-04843.MethArray.Green.T C3L-04843 GBM Methylation Array tumor CPT0329590006 204372030106_R05C01_Grn.idat 13677885 IDAT Green fc664367-0450-4210-b0c0-32953d26619c c34710747e8361b5a1720f2f47204a83 NA Primary Tumor C3L-04843-05 -C3L-04843.MethArray.Red.T C3L-04843 GBM Methylation Array tumor CPT0329590006 204372030106_R05C01_Red.idat 13677885 IDAT Red a4350bd7-a768-4072-8477-81b693aa39b9 7e770a2441dc2138b3b6bd23917980e3 NA Primary Tumor C3L-04843-05 -C3L-04843.miRNA-Seq.T C3L-04843 GBM miRNA-Seq tumor CPT0329590009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CAACTA_S29_L008_R1_001.unaln.bam 250439366 BAM NA fa10c05a-c87c-43cc-b088-4864057b869d b0130eb501b3ac759323cceedbfc6f22 NA Primary Tumor C3L-04843-05 -C3L-04843.miRNA-Seq.T.hg38 C3L-04843 GBM miRNA-Seq tumor CPT0329590009 515d1e32-f651-4724-bb81-61811c6521bd_mirnaseq_gdc_realn.bam 285186134 BAM NA 1cb7f97e-d7fe-40d4-8404-95cf05c3014d 8090a6854834a71861f556799f1d5e50 hg38 Primary Tumor C3L-04843-05 -C3L-04843.RNA-Seq.R1.T C3L-04843 GBM RNA-Seq tumor CPT0329590009 200505_UNC31-K00269_0277_AHGFKNBBXY_TGCGAGAC-CATTGTTG_S32_L008_R1_001.fastq.gz 4080113834 FASTQ NA b2976a2a-0485-4bcd-8c55-3b7d1a6b0414 bcf89a21b7f8b83a8be606deb5334234 NA Primary Tumor C3L-04843-05 -C3L-04843.RNA-Seq.R2.T C3L-04843 GBM RNA-Seq tumor CPT0329590009 200505_UNC31-K00269_0277_AHGFKNBBXY_TGCGAGAC-CATTGTTG_S32_L008_R2_001.fastq.gz 4589850953 FASTQ NA 97ea2622-ed5e-42d5-b3cf-135be69cd9c3 7c9778bca1b0914e1d36eb85016b3267 NA Primary Tumor C3L-04843-05 -C3L-04843.WGS.N C3L-04843 GBM WGS blood_normal CPT0329700002 CPT0329700002.WholeGenome.RP-2158.bam 29138716308 BAM NA a0e1a1e7-1321-4e9e-95de-91f1c18cafde cddb630671b78138724952e4d031fcea hg19 Blood Derived Normal C3L-04843-31 -C3L-04843.WGS.T C3L-04843 GBM WGS tumor CPT0329590006 CPT0329590006.WholeGenome.RP-2158.bam 25261456820 BAM NA 120e25ac-d786-43de-9ec5-6d9a7ce3fdd2 02cec57b6062c0b9bc08646905d2d073 hg19 Primary Tumor C3L-04843-05 -C3L-04843.WXS.N C3L-04843 GBM WXS blood_normal CPT0329700002 CPT0329700002.WholeExome.RP-1303.bam 24382101090 BAM NA 381ce4d7-a0c7-445e-af63-aca683d60ccd 7191cc4bdbd9408170300450408c3d69 hg19 Blood Derived Normal C3L-04843-31 -C3L-04843.WXS.T C3L-04843 GBM WXS tumor CPT0329590006 CPT0329590006.WholeExome.RP-1303.bam 23648311130 BAM NA af39d5a2-efbf-4f97-858a-30bb4fbb8abb 2a57379149b3b24db8cfe7797cd7c18c hg19 Primary Tumor C3L-04843-05 C3L-04844.MethArray.Green.T C3L-04844 HNSCC Methylation Array tumor CPT0248330006 203281980233_R07C01_Grn.idat 13676211 IDAT Green e45f6d83-945e-436a-a1e2-e9994cc45655 541cc27721a6ce26a2f5bf82a31e694b NA Primary Tumor C3L-04844-01 C3L-04844.MethArray.Red.T C3L-04844 HNSCC Methylation Array tumor CPT0248330006 203281980233_R07C01_Red.idat 13676211 IDAT Red 1430a45c-97d4-4ebe-a68c-cdb7ec4114bd 581d11b6a8aaa3d618d88c8085954db5 NA Primary Tumor C3L-04844-01 C3L-04844.miRNA-Seq.T C3L-04844 HNSCC miRNA-Seq tumor CPT0248330009 190228_UNC32-K00270_0151_AHYLY3BBXX_TATAAT_S44_L007_R1_001.unaln.bam 253673217 BAM NA bd348995-2ed0-41cf-a231-f551265d1311 918065cefd2c914cf50a650be7010dd9 NA Primary Tumor C3L-04844-01 @@ -17722,6 +17198,7 @@ C3L-04971.WXS.Tpb.hg38 C3L-04971 AML WXS tumor_peripheral_blood CPT0339330002 d5 C3L-04976.MethArray.Green.Tpb C3L-04976 AML Methylation Array tumor_peripheral_blood CPT0340440002 205987780101_R04C01_Grn.idat 13677888 IDAT Green 8b487bc9-bb65-4c0a-bef0-9e115ce26b02 11d4467948c09ebd66e171fa63254562 NA Primary Blood Derived Cancer - Peripheral Blood C3L-04976-54 C3L-04976.MethArray.Red.Tpb C3L-04976 AML Methylation Array tumor_peripheral_blood CPT0340440002 205987780101_R04C01_Red.idat 13677888 IDAT Red 20abb0c4-846b-4d2b-bc58-05d7045482a6 c03e89eef804ba16a57babac4c5c572a NA Primary Blood Derived Cancer - Peripheral Blood C3L-04976-54 C3L-04976.miRNA-Seq.Tpb C3L-04976 AML miRNA-Seq tumor_peripheral_blood CPT0340450002 220505_UNC32-K00270_0319_AHMV2KBBXY_CATGGC_S9_L004_R1_001.unaln.bam 197974102 BAM NA 4bc495d3-921d-44ad-9cc2-607be6db51d0 1c6e3d6baff267b053bc64bc29581d33 NA Primary Blood Derived Cancer - Peripheral Blood C3L-04976-55 +C3L-04976.miRNA-Seq.Tpb.hg38 C3L-04976 AML miRNA-Seq tumor_peripheral_blood CPT0340450002 d6156a78-b7e4-4ff9-8e27-62251b99c795_mirnaseq_gdc_realn.bam 216913332 BAM NA ff0202ec-df3c-4a78-8840-0d1c76adcf6d 4d3627ffb31caa8d4bf445acc5f28f4f hg38 Primary Blood Derived Cancer - Peripheral Blood C3L-04976-55 C3L-04976.RNA-Seq.chimeric.Tpb.hg38 C3L-04976 AML RNA-Seq tumor_peripheral_blood CPT0340450002 a3ed3de5-f808-4b1c-bdd6-44db47c9b55a.rna_seq.chimeric.gdc_realn.bam 438798821 BAM chimeric ff36c299-c0fc-4f2e-a1b0-ed692460a4d0 2ab1eb2a1b7b42405e883bab30394064 hg38 Primary Blood Derived Cancer - Peripheral Blood C3L-04976-55 C3L-04976.RNA-Seq.genomic.Tpb.hg38 C3L-04976 AML RNA-Seq tumor_peripheral_blood CPT0340450002 a3ed3de5-f808-4b1c-bdd6-44db47c9b55a.rna_seq.genomic.gdc_realn.bam 7734574249 BAM genomic cf590f02-6863-4801-99e6-8f7f57f8eeec 9c39b9c1c19ab22b73d555ac1cd56d81 hg38 Primary Blood Derived Cancer - Peripheral Blood C3L-04976-55 C3L-04976.RNA-Seq.R1.Tpb C3L-04976 AML RNA-Seq tumor_peripheral_blood CPT0340450002 211207_UNC32-K00270_0305_AHMW37BBXY_GCACGGAC-GTCTCGCA_S27_L007_R1_001.fastq.gz 3833175431 FASTQ NA b086bac9-f82e-4f92-acb5-4ec2e8f3e1e2 12397874d652455e4c389a6b820491d9 NA Primary Blood Derived Cancer - Peripheral Blood C3L-04976-55 @@ -18302,6 +17779,7 @@ C3L-05387.RNA-Seq.transcriptome.Tpb.hg38 C3L-05387 AML RNA-Seq tumor_peripheral_ C3L-05387.WGS.Nbc C3L-05387 AML WGS buccal_normal CPT0275080001 CPT0275080001.WholeGenome.RP-2158.bam 44651253231 BAM NA fecf52b4-a3f7-4e11-a384-4f52325fddbe 9a688cb88f8e0546442d2c05963931a6 hg19 Buccal Cell Normal C3L-05387-52 C3L-05387.WGS.Nbc.hg38 C3L-05387 AML WGS buccal_normal CPT0275080001 34b3bbed-c713-4a6b-ab3d-e3b04d33c731_wgs_gdc_realn.bam 400133768733 BAM NA 4ddeb513-59b0-4e4b-b1e5-61cf1f7fb6fe e178dddbb0ed1d50a3c681a36146538a hg38 Buccal Cell Normal C3L-05387-52 C3L-05387.WGS.Tpb C3L-05387 AML WGS tumor_peripheral_blood CPT0275090002 CPT0275090002.WholeGenome.RP-2158.bam 52291271279 BAM NA 10ea385c-66dc-47d9-b3b3-886561f2e207 72d83a89882ef2f7e6aa34aac53be4e6 hg19 Primary Blood Derived Cancer - Peripheral Blood C3L-05387-54 +C3L-05387.WGS.Tpb.hg38 C3L-05387 AML WGS tumor_peripheral_blood CPT0275090002 431ccf9c-42b9-480a-9aac-0cbfb7536a3a_wgs_gdc_realn.bam 154942526484 BAM NA 0520ac98-e70b-4ed0-a3cb-d9ffc1552369 799b80de89174cc54adf0bd4cb0ad0ed hg38 Primary Blood Derived Cancer - Peripheral Blood C3L-05387-54 C3L-05387.WXS.Nbc C3L-05387 AML WXS buccal_normal CPT0275080001 CPT0275080001.WholeExome.RP-1303.bam 26721993786 BAM NA 11f96ebf-4962-4f6b-80cd-f94737ca1a3d 230919e73081c24e5d14c1d0d42c8df4 hg19 Buccal Cell Normal C3L-05387-52 C3L-05387.WXS.Nbc.hg38 C3L-05387 AML WXS buccal_normal CPT0275080001 34b3bbed-c713-4a6b-ab3d-e3b04d33c731_wxs_gdc_realn.bam 37711680308 BAM NA 244bf8e7-c556-45ac-89b8-7f2fb94e2ea6 c48614437228e54b3a12b4ef0644d019 hg38 Buccal Cell Normal C3L-05387-52 C3L-05387.WXS.Tpb C3L-05387 AML WXS tumor_peripheral_blood CPT0275090002 CPT0275090002.WholeExome.RP-1303.bam 25699517261 BAM NA 1c2d05f4-e728-4df5-9a5b-cf0632b50408 8e8d7e8c8015a62e643b1da3e82fe8bd hg19 Primary Blood Derived Cancer - Peripheral Blood C3L-05387-54 @@ -18831,6 +18309,7 @@ C3L-05815.WXS.Tpb.hg38 C3L-05815 AML WXS tumor_peripheral_blood CPT0323050002 da C3L-05816.MethArray.Green.Tpb C3L-05816 AML Methylation Array tumor_peripheral_blood CPT0341500002 205705520128_R07C01_Grn.idat 13677885 IDAT Green 9a88da23-fa5e-45cc-b541-348491b3eb8d dab69e3e3ae7f961ce69ad545c091e2a NA Primary Blood Derived Cancer - Peripheral Blood C3L-05816-54 C3L-05816.MethArray.Red.Tpb C3L-05816 AML Methylation Array tumor_peripheral_blood CPT0341500002 205705520128_R07C01_Red.idat 13677885 IDAT Red 8de997b4-9b46-4c3b-b19e-65bf0c644723 909f5ac53f6f879ee8e0ac162bfe0501 NA Primary Blood Derived Cancer - Peripheral Blood C3L-05816-54 C3L-05816.miRNA-Seq.Tpb C3L-05816 AML miRNA-Seq tumor_peripheral_blood CPT0341510002 220505_UNC32-K00270_0319_AHMV2KBBXY_CATTTT_S3_L003_R1_001.unaln.bam 262093107 BAM NA 0f68a5d3-ea29-4a60-8047-ccf9434bbd56 e3aa0e7fb5d9904eb0f8f5cb1ada390e NA Primary Blood Derived Cancer - Peripheral Blood C3L-05816-55 +C3L-05816.miRNA-Seq.Tpb.hg38 C3L-05816 AML miRNA-Seq tumor_peripheral_blood CPT0341510002 ff6e4aa2-9fdb-4100-adb4-5c64640e4276_mirnaseq_gdc_realn.bam 288638340 BAM NA 801b8d14-e26e-4b58-906a-36164cead799 f7c28f6941b41d5c11c127491b1e9128 hg38 Primary Blood Derived Cancer - Peripheral Blood C3L-05816-55 C3L-05816.RNA-Seq.chimeric.Tpb.hg38 C3L-05816 AML RNA-Seq tumor_peripheral_blood CPT0341510002 17fa4d85-7d8c-4762-91e2-4592669e1001.rna_seq.chimeric.gdc_realn.bam 702224929 BAM chimeric cfd80439-539f-4540-8c1f-3c4b1d2abb4c ae7b7a1589f7279026afcb0557231c69 hg38 Primary Blood Derived Cancer - Peripheral Blood C3L-05816-55 C3L-05816.RNA-Seq.genomic.Tpb.hg38 C3L-05816 AML RNA-Seq tumor_peripheral_blood CPT0341510002 17fa4d85-7d8c-4762-91e2-4592669e1001.rna_seq.genomic.gdc_realn.bam 8646661750 BAM genomic 6c1c7b96-66ce-44be-81f1-cd3101d1c12e e664fede11b3311f4e917a5212ba12cf hg38 Primary Blood Derived Cancer - Peripheral Blood C3L-05816-55 C3L-05816.RNA-Seq.R1.Tpb C3L-05816 AML RNA-Seq tumor_peripheral_blood CPT0341510002 211207_UNC32-K00270_0305_AHMW37BBXY_GCAGAATT-ACCGGCCA_S31_L008_R1_001.fastq.gz 4019035536 FASTQ NA 6530a944-65a6-445f-acd2-40167a8ebabb 02ba8f009763cf67cf090b7bfcac1256 NA Primary Blood Derived Cancer - Peripheral Blood C3L-05816-55 @@ -19695,6 +19174,23 @@ C3L-06367.WGS.Tbm C3L-06367 AML WGS tumor_bone_marrow CPT0410800002 CPT041080000 C3L-06367.WGS.Tbm.hg38 C3L-06367 AML WGS tumor_bone_marrow CPT0410800002 99b6afa0-9d8a-46f6-8038-5c90c81079a0_wgs_gdc_realn.bam 168586222152 BAM NA 4b683e0d-6960-41cb-99c1-ed1ab9efa601 11c565325622546b20e89f13d6a8d8e6 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-06367-54 C3L-06367.WXS.Tbm C3L-06367 AML WXS tumor_bone_marrow CPT0410800002 CPT0410800002.WholeExome.RP-1303.bam 17821458501 BAM NA 8f18a1d8-32c5-4ec1-8e64-f71fa919e4d7 e2281a5f9689cb4e947122b2a8c85822 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-06367-54 C3L-06367.WXS.Tbm.hg38 C3L-06367 AML WXS tumor_bone_marrow CPT0410800002 99b6afa0-9d8a-46f6-8038-5c90c81079a0_wxs_gdc_realn.bam 24544292588 BAM NA 1a49636a-6a49-406e-8e41-a7c17b19b084 9e0e8462f691eb64e5c15098a31c8439 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-06367-54 +C3L-06368.MethArray.Green.Tpb C3L-06368 AML Methylation Array tumor_peripheral_blood CPT0410410002 205705520128_R06C01_Grn.idat 13677886 IDAT Green 51fdafb1-e612-4aad-9827-910512d68387 6c6e638bb9a946f266fd5f8947429521 NA Primary Blood Derived Cancer - Peripheral Blood C3L-06368-57 +C3L-06368.MethArray.Red.Tpb C3L-06368 AML Methylation Array tumor_peripheral_blood CPT0410410002 205705520128_R06C01_Red.idat 13677886 IDAT Red de5be602-4db6-4f55-8327-b84108002dad aaf53265efc3bd175dcddba410c8cd56 NA Primary Blood Derived Cancer - Peripheral Blood C3L-06368-57 +C3L-06368.miRNA-Seq.Tbm C3L-06368 AML miRNA-Seq tumor_bone_marrow CPT0410390002 220125_UNC32-K00270_0311_AHMNYYBBXY_ATGAGC_S43_L003_R1_001.unaln.bam 194735341 BAM NA b1f4e05f-6025-4a3c-8e7b-8178a1fc763b 8b58a5cfaeee08fb791c6d354d0a553e NA Primary Blood Derived Cancer - Bone Marrow C3L-06368-55 +C3L-06368.miRNA-Seq.Tbm.hg38 C3L-06368 AML miRNA-Seq tumor_bone_marrow CPT0410390002 34388533-55c7-4511-b90c-ae46f922d89f_mirnaseq_gdc_realn.bam 215482150 BAM NA 9ba5b742-39d0-487d-818d-45d243a1d61a 73cf8b1d45fe4d1e5bb4e7d139c068dd hg38 Primary Blood Derived Cancer - Bone Marrow C3L-06368-55 +C3L-06368.RNA-Seq.chimeric.Tbm.hg38 C3L-06368 AML RNA-Seq tumor_bone_marrow CPT0410390002 4754d053-3db3-46cb-8500-c5b425f7be39.rna_seq.chimeric.gdc_realn.bam 807659166 BAM chimeric 410c254d-68bc-49e7-bc77-17fede4bbedb e37fd2b0d2c67dc1fdc72588fb1cb01a hg38 Primary Blood Derived Cancer - Bone Marrow C3L-06368-55 +C3L-06368.RNA-Seq.genomic.Tbm.hg38 C3L-06368 AML RNA-Seq tumor_bone_marrow CPT0410390002 4754d053-3db3-46cb-8500-c5b425f7be39.rna_seq.genomic.gdc_realn.bam 8147258324 BAM genomic d83aa4ed-0be6-4aa6-9afe-ca6f13c60cef 80d8b53938bb0cf47d19d366fa77464b hg38 Primary Blood Derived Cancer - Bone Marrow C3L-06368-55 +C3L-06368.RNA-Seq.R1.Tbm C3L-06368 AML RNA-Seq tumor_bone_marrow CPT0410390002 211207_UNC32-K00270_0306_BHMW5YBBXY_GGAGCGTC-GTCCGTGC_S20_L005_R1_001.fastq.gz 4032905959 FASTQ NA 8d70e8fc-2f6a-4da7-8a13-3cb09163563d f2ace103a3847a835121350e659065ef NA Primary Blood Derived Cancer - Bone Marrow C3L-06368-55 +C3L-06368.RNA-Seq.R2.Tbm C3L-06368 AML RNA-Seq tumor_bone_marrow CPT0410390002 211207_UNC32-K00270_0306_BHMW5YBBXY_GGAGCGTC-GTCCGTGC_S20_L005_R2_001.fastq.gz 4345871199 FASTQ NA 08b3a1d2-9038-4e93-b052-9438bf1ec5cd eef8682bdafdf5c9cc67c32ba9547b1a NA Primary Blood Derived Cancer - Bone Marrow C3L-06368-55 +C3L-06368.RNA-Seq.transcriptome.Tbm.hg38 C3L-06368 AML RNA-Seq tumor_bone_marrow CPT0410390002 4754d053-3db3-46cb-8500-c5b425f7be39.rna_seq.transcriptome.gdc_realn.bam 7621681346 BAM transcriptome 112bc06b-307d-4858-a8cf-c2cd850851a0 3a1d3ff998b3819aa6739054d3e10f2f hg38 Primary Blood Derived Cancer - Bone Marrow C3L-06368-55 +C3L-06368.WGS.Nbc C3L-06368 AML WGS buccal_normal CPT0410360001 CPT0410360001.WholeGenome.RP-2158.bam 48116149732 BAM NA 20cfe70e-f74a-44be-98fb-10650f5bbc25 65d229cd519bb74e46e19dec40445755 hg19 Buccal Cell Normal C3L-06368-51,C3L-06368-52,C3L-06368-53 +C3L-06368.WGS.Nbc.hg38 C3L-06368 AML WGS buccal_normal CPT0410360001 6e1ac39e-ec0f-4c96-b490-7efaf7351677_wgs_gdc_realn.bam 141822168429 BAM NA 34caf708-795e-4b5b-9aa0-f958cc5dfdb0 aa8e36cc428a58dc58ba222c602338fd hg38 Buccal Cell Normal C3L-06368-51,C3L-06368-52,C3L-06368-53 +C3L-06368.WGS.Tpb C3L-06368 AML WGS tumor_peripheral_blood CPT0410410002 CPT0410410002.WholeGenome.RP-2158.bam 47832096739 BAM NA 178f44ea-57cf-4254-9d8e-27e8779aa3bb 2c7bde4ecd791172592c9e8651d57944 hg19 Primary Blood Derived Cancer - Peripheral Blood C3L-06368-57 +C3L-06368.WGS.Tpb.hg38 C3L-06368 AML WGS tumor_peripheral_blood CPT0410410002 bb9ec808-6239-4353-950e-64991f8acfa6_wgs_gdc_realn.bam 142409916076 BAM NA 09a49042-9bfb-4c24-9643-e4c0de3a62d6 ab759607d1e500e074b06c5d1f67c5f4 hg38 Primary Blood Derived Cancer - Peripheral Blood C3L-06368-57 +C3L-06368.WXS.Nbc C3L-06368 AML WXS buccal_normal CPT0410360001 CPT0410360001.WholeExome.RP-1303.bam 26741144956 BAM NA 098dfaad-ee4e-466b-9eb8-2a84b87448de d999251a7c96802fee7562a4099639f6 hg19 Buccal Cell Normal C3L-06368-51,C3L-06368-52,C3L-06368-53 +C3L-06368.WXS.Nbc.hg38 C3L-06368 AML WXS buccal_normal CPT0410360001 6e1ac39e-ec0f-4c96-b490-7efaf7351677_wxs_gdc_realn.bam 37045085962 BAM NA 431be984-ae6d-416d-9841-1b56a4ceeb6f 82d976da9b89640bc1b1e5f70754d678 hg38 Buccal Cell Normal C3L-06368-51,C3L-06368-52,C3L-06368-53 +C3L-06368.WXS.Tpb C3L-06368 AML WXS tumor_peripheral_blood CPT0410410002 CPT0410410002.WholeExome.RP-1303.bam 23108226840 BAM NA f5f139b6-1ad1-4f89-b0f3-6d3ec420c787 4100af9a26238b994c753f4a543bc6a4 hg19 Primary Blood Derived Cancer - Peripheral Blood C3L-06368-57 +C3L-06368.WXS.Tpb.hg38 C3L-06368 AML WXS tumor_peripheral_blood CPT0410410002 bb9ec808-6239-4353-950e-64991f8acfa6_wxs_gdc_realn.bam 32288108727 BAM NA 4c8d49db-dfe8-477a-b33d-903a587afed1 b276c55b8b29e3c2b608d5eef5b3aef6 hg38 Primary Blood Derived Cancer - Peripheral Blood C3L-06368-57 C3L-06369.MethArray.Green.Tbm C3L-06369 AML Methylation Array tumor_bone_marrow CPT0413490002 204930640111_R06C01_Grn.idat 13677960 IDAT Green 522a2b24-cc1c-443d-9b16-2a220f253e1f 258a2babf8a5a16df95985d21943720e NA Primary Blood Derived Cancer - Bone Marrow C3L-06369-57 C3L-06369.MethArray.Red.Tbm C3L-06369 AML Methylation Array tumor_bone_marrow CPT0413490002 204930640111_R06C01_Red.idat 13677960 IDAT Red e073afad-a137-4894-bf4a-f9479cb63425 55798a5fc680b56dce0f2fd9047237cc NA Primary Blood Derived Cancer - Bone Marrow C3L-06369-57 C3L-06369.miRNA-Seq.Tbm C3L-06369 AML miRNA-Seq tumor_bone_marrow CPT0413500002 210702_UNC32-K00270_0289_AHKJ22BBXY_CAGGCG_S30_L005_R1_001.unaln.bam 256246836 BAM NA 35fe6185-a3ca-4b08-8bef-bc1cd2c9e803 43428c20c9ac5ca3532f8c614c9a420f NA Primary Blood Derived Cancer - Bone Marrow C3L-06369-58 @@ -19993,6 +19489,11 @@ C3L-06809.WXS.Tbm.hg38 C3L-06809 AML WXS tumor_bone_marrow CPT0423800002 fde4043 C3L-06912.MethArray.Green.T C3L-06912 LGG Methylation Array tumor CPT0388940011 206009560066_R04C01_Grn.idat 13677950 IDAT Green d8921cb7-13c6-493a-bec1-956b0c0b9acf b986d5a861649338c3fdd0b9409b907a NA Primary Tumor C3L-06912-01 C3L-06912.MethArray.Red.T C3L-06912 LGG Methylation Array tumor CPT0388940011 206009560066_R04C01_Red.idat 13677950 IDAT Red b31b7919-5e5e-4f48-b680-be7b5b94935c eb5afa5e81d98239383277ef71b86715 NA Primary Tumor C3L-06912-01 C3L-06912.miRNA-Seq.T C3L-06912 LGG miRNA-Seq tumor CPT0388940008 220505_UNC32-K00270_0319_AHMV2KBBXY_CGGAAT_S5_L003_R1_001.unaln.bam 386996923 BAM NA c31ac29e-a56e-4e48-b377-caf32badf113 b3050cf5276ec747c59d992e1fc45dd1 NA Primary Tumor C3L-06912-01 +C3L-06912.miRNA-Seq.T.hg38 C3L-06912 LGG miRNA-Seq tumor CPT0388940008 dd37739a-f81b-472f-89ea-f146d9ac356a_mirnaseq_gdc_realn.bam 436232429 BAM NA a25db8b9-eabf-48f6-b771-a622614d55e7 4b6810155e49b65050a0ccd59f8ddd24 hg38 Primary Tumor C3L-06912-01 +C3L-06912.RNA-Seq.R1.T C3L-06912 LGG RNA-Seq tumor CPT0388940008 220603_UNC32-K00270_0322_BHNKFLBBXY_ATGTAAGT-ACTCTATG_S2_L006_R1_001.fastq.gz 3876945813 FASTQ NA 8f2c2b6c-85de-49cf-86b7-f760a75e157a 0069031bc035562f5cc4e483f50f2875 NA Primary Tumor C3L-06912-01 +C3L-06912.RNA-Seq.R2.T C3L-06912 LGG RNA-Seq tumor CPT0388940008 220603_UNC32-K00270_0322_BHNKFLBBXY_ATGTAAGT-ACTCTATG_S2_L006_R2_001.fastq.gz 4045804806 FASTQ NA 9ff596fa-a71c-47cb-8547-114e3ba9da05 42a0d1c88599d3a9538397a067738f51 NA Primary Tumor C3L-06912-01 +C3L-06912.WGS.N C3L-06912 LGG WGS blood_normal CPT0389050005 CPT0389050005.WholeGenome.RP-2158.bam 70563558355 BAM NA 767274c6-e610-4a1b-9899-1647d13939b4 d90469b36a7b9e3626ed3f96357b44bb hg19 Blood Derived Normal C3L-06912-31 +C3L-06912.WGS.T C3L-06912 LGG WGS tumor CPT0388940011 CPT0388940011.WholeGenome.RP-2158.bam 129779104068 BAM NA b6f271ab-8986-4465-a214-f06c7e3b3d37 47ba8b844ec46eb1b3c81ca285afc00f hg19 Primary Tumor C3L-06912-01 C3L-06951.MethArray.Green.Tbm C3L-06951 AML Methylation Array tumor_bone_marrow CPT0394100002 205555390164_R06C01_Grn.idat 13677955 IDAT Green 7536f1ee-4679-46e4-a4e5-781c7be164c7 f4ead826f31638df1d2f23d96e9bb6ba NA Primary Blood Derived Cancer - Bone Marrow C3L-06951-54 C3L-06951.MethArray.Red.Tbm C3L-06951 AML Methylation Array tumor_bone_marrow CPT0394100002 205555390164_R06C01_Red.idat 13677955 IDAT Red 0960a6c1-dfbf-44c0-8f57-21d4dced7374 3d7356ad63dfcd11f3e0c01bc134c710 NA Primary Blood Derived Cancer - Bone Marrow C3L-06951-54 C3L-06951.miRNA-Seq.Tbm C3L-06951 AML miRNA-Seq tumor_bone_marrow CPT0394200002 210702_UNC32-K00270_0289_AHKJ22BBXY_ATTCCT_S24_L005_R1_001.unaln.bam 239355372 BAM NA b59050bc-46cd-4685-885c-0158c2668e4c 1e2c1fba0ad0a930d6d10ea006301cca NA Primary Blood Derived Cancer - Bone Marrow C3L-06951-57 @@ -20115,6 +19616,7 @@ C3L-06981.WXS.Tpb.hg38 C3L-06981 AML WXS tumor_peripheral_blood CPT0404530002 8f C3L-06982.MethArray.Green.Tpb C3L-06982 AML Methylation Array tumor_peripheral_blood CPT0404410002 205707890143_R04C01_Grn.idat 13677885 IDAT Green 34111be2-10dc-4704-9ae0-2fcebcc99590 a0dfd8f2007010962557b07cb69a7f2b NA Primary Blood Derived Cancer - Peripheral Blood C3L-06982-55 C3L-06982.MethArray.Red.Tpb C3L-06982 AML Methylation Array tumor_peripheral_blood CPT0404410002 205707890143_R04C01_Red.idat 13677885 IDAT Red 470adee3-db3c-4ae5-b1b7-5d8e1dc9a29a 79d3da44d194100cb3039d662af04da4 NA Primary Blood Derived Cancer - Peripheral Blood C3L-06982-55 C3L-06982.miRNA-Seq.Tpb C3L-06982 AML miRNA-Seq tumor_peripheral_blood CPT0404420002 220505_UNC32-K00270_0319_AHMV2KBBXY_CAAAAG_S2_L003_R1_001.unaln.bam 191863960 BAM NA 22695312-0681-458a-941d-d41503e39b0e c079bd6df4686e9c2259bd1aaa04566f NA Primary Blood Derived Cancer - Peripheral Blood C3L-06982-56 +C3L-06982.miRNA-Seq.Tpb.hg38 C3L-06982 AML miRNA-Seq tumor_peripheral_blood CPT0404420002 e26133dc-3302-47a4-8889-c68fbeb3418b_mirnaseq_gdc_realn.bam 215984390 BAM NA 013be4dc-0814-4ad1-84e9-8987b4ac5924 785c26d9edbdb6cd220e1cbad8b1a7bf hg38 Primary Blood Derived Cancer - Peripheral Blood C3L-06982-56 C3L-06982.RNA-Seq.chimeric.Tpb.hg38 C3L-06982 AML RNA-Seq tumor_peripheral_blood CPT0404420002 393b1cc5-7758-4a78-b930-778147aeaf97.rna_seq.chimeric.gdc_realn.bam 662776335 BAM chimeric 5fcd0d16-b92a-47f8-97b7-7257b6d4ae80 176b5616cda8ba8c67a39ca26713dafd hg38 Primary Blood Derived Cancer - Peripheral Blood C3L-06982-56 C3L-06982.RNA-Seq.genomic.Tpb.hg38 C3L-06982 AML RNA-Seq tumor_peripheral_blood CPT0404420002 393b1cc5-7758-4a78-b930-778147aeaf97.rna_seq.genomic.gdc_realn.bam 6920066479 BAM genomic 2e3c51fa-c9b5-4611-a5bf-ebabbc183fd7 761f17607cea9dbc955c62687e61634b hg38 Primary Blood Derived Cancer - Peripheral Blood C3L-06982-56 C3L-06982.RNA-Seq.R1.Tpb C3L-06982 AML RNA-Seq tumor_peripheral_blood CPT0404420002 211207_UNC32-K00270_0306_BHMW5YBBXY_GCAATGCA-GGAACGTT_S23_L006_R1_001.fastq.gz 3474697330 FASTQ NA da3e229b-d868-4f5f-b075-be1171998087 915e62f549c55f9270f57ec862d913f3 NA Primary Blood Derived Cancer - Peripheral Blood C3L-06982-56 @@ -20180,6 +19682,7 @@ C3L-07012.WXS.Tbm.hg38 C3L-07012 AML WXS tumor_bone_marrow CPT0423540002 4398239 C3L-07013.MethArray.Green.Tbm C3L-07013 AML Methylation Array tumor_bone_marrow CPT0423640002 205987780101_R06C01_Grn.idat 13677888 IDAT Green 1b41e550-2296-40f0-baa3-646304b71e8e ad521768d7541689ccc9bfb71654a34f NA Primary Blood Derived Cancer - Bone Marrow C3L-07013-54 C3L-07013.MethArray.Red.Tbm C3L-07013 AML Methylation Array tumor_bone_marrow CPT0423640002 205987780101_R06C01_Red.idat 13677888 IDAT Red d1850a58-d8d6-4985-b9db-c7b5fcfe95c3 eda100a14da59279e61e8e2f2d90896e NA Primary Blood Derived Cancer - Bone Marrow C3L-07013-54 C3L-07013.miRNA-Seq.Tbm C3L-07013 AML miRNA-Seq tumor_bone_marrow CPT0423650002 220505_UNC32-K00270_0319_AHMV2KBBXY_CCAACA_S4_L003_R1_001.unaln.bam 170562530 BAM NA f49a134c-f0f2-4b94-b21a-78747ab82b9b 9ce1e07e2e4486cd6a56cd321024acad NA Primary Blood Derived Cancer - Bone Marrow C3L-07013-55 +C3L-07013.miRNA-Seq.Tbm.hg38 C3L-07013 AML miRNA-Seq tumor_bone_marrow CPT0423650002 c86fd7ee-7856-4db7-9a28-44c2e7675f20_mirnaseq_gdc_realn.bam 192126017 BAM NA ce188040-0ad7-4437-9ee9-6372efa2d233 b6a430ccd44d1a7ae06a90597d30be06 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-07013-55 C3L-07013.RNA-Seq.chimeric.Tbm.hg38 C3L-07013 AML RNA-Seq tumor_bone_marrow CPT0423650002 33252ff5-8c63-4e04-8b60-dbd637bde0c5.rna_seq.chimeric.gdc_realn.bam 74559440 BAM chimeric 6506be33-e425-4684-9851-eb0f0f9a65ae a6a4e699b4069978eaee57ccc5865a8c hg38 Primary Blood Derived Cancer - Bone Marrow C3L-07013-55 C3L-07013.RNA-Seq.genomic.Tbm.hg38 C3L-07013 AML RNA-Seq tumor_bone_marrow CPT0423650002 33252ff5-8c63-4e04-8b60-dbd637bde0c5.rna_seq.genomic.gdc_realn.bam 9223432526 BAM genomic 70d345a0-0a2e-4c75-9920-14c36791d713 6080eaf2f266e2cf64430bf208faf78a hg38 Primary Blood Derived Cancer - Bone Marrow C3L-07013-55 C3L-07013.RNA-Seq.R1.Tbm C3L-07013 AML RNA-Seq tumor_bone_marrow CPT0423650002 211207_UNC32-K00270_0306_BHMW5YBBXY_CTACGACA-GAGTCCAA_S14_L004_R1_001.fastq.gz 3609610481 FASTQ NA 17aeb355-fa4f-4ff5-9fd5-8d0e21aff2d3 edcba2beb1192a30c44f5a3a5a3d81cb NA Primary Blood Derived Cancer - Bone Marrow C3L-07013-55 @@ -20243,6 +19746,10 @@ C3L-07202.WXS.T.hg38 C3L-07202 GBM WXS tumor CPT0407650010 ce1dba67-d732-46e3-9e C3L-07212.MethArray.Green.T C3L-07212 LGG Methylation Array tumor CPT0447560012 206250290178_R01C01_Grn.idat 13677942 IDAT Green 4f08cfbd-be2d-4a50-b19b-e1b22347033d bf4dad83e8e006bbe9e2d55985973d85 NA Primary Tumor C3L-07212-01 C3L-07212.MethArray.Red.T C3L-07212 LGG Methylation Array tumor CPT0447560012 206250290178_R01C01_Red.idat 13677942 IDAT Red 8e8b37a3-d0f9-41da-a850-2baf9643d279 dc45b12943ecb40ace61cdc1f7ff1143 NA Primary Tumor C3L-07212-01 C3L-07212.miRNA-Seq.T C3L-07212 LGG miRNA-Seq tumor CPT0447560007 220505_UNC32-K00270_0319_AHMV2KBBXY_CTAGCT_S6_L003_R1_001.unaln.bam 310872045 BAM NA e44650c7-2e73-4786-bb16-e7a3d837fe16 06345681442ce851c00904871d0a65ba NA Primary Tumor C3L-07212-01 +C3L-07212.miRNA-Seq.T.hg38 C3L-07212 LGG miRNA-Seq tumor CPT0447560007 deca3f1a-5e78-4c28-a713-60d30337a896_mirnaseq_gdc_realn.bam 343046530 BAM NA 72a1c78c-d3bc-4888-9875-03abdddc0ea8 b908081b3c2c700bf492f17005d6ce0b hg38 Primary Tumor C3L-07212-01 +C3L-07212.RNA-Seq.R1.T C3L-07212 LGG RNA-Seq tumor CPT0447560007 220603_UNC32-K00270_0322_BHNKFLBBXY_GCACGGAC-GTCTCGCA_S3_L006_R1_001.fastq.gz 2006897789 FASTQ NA 93b39fb7-26e7-4e70-9145-726cd8868b5b eb2c1e2b53c14f292b2fc9e2dc637a97 NA Primary Tumor C3L-07212-01 +C3L-07212.RNA-Seq.R2.T C3L-07212 LGG RNA-Seq tumor CPT0447560007 220603_UNC32-K00270_0322_BHNKFLBBXY_GCACGGAC-GTCTCGCA_S3_L006_R2_001.fastq.gz 2105896279 FASTQ NA ec4877da-dfc4-4a6a-ac9c-5500fa56ba2c fa90596fa5a4ff3fb26b3750a624bb09 NA Primary Tumor C3L-07212-01 +C3L-07212.WGS.N C3L-07212 LGG WGS blood_normal CPT0447490001 CPT0447490001.WholeGenome.RP-2158.bam 59771375114 BAM NA b5d0da29-0fbe-4a40-b814-025b6c7e872b 00ac381510523f28795ad33298a331fb hg19 Blood Derived Normal C3L-07212-31 C3L-07213.MethArray.Green.T C3L-07213 GBM Methylation Array tumor CPT0407970010 205555390176_R04C01_Grn.idat 13677955 IDAT Green ed6a2433-0756-4efa-8a10-cec2fcb27e88 6a00a334c1c3fb59edcc99068255357a NA Primary Tumor C3L-07213-01 C3L-07213.MethArray.Red.T C3L-07213 GBM Methylation Array tumor CPT0407970010 205555390176_R04C01_Red.idat 13677955 IDAT Red 4a399bb5-ed14-4a50-818d-c651f6d48540 944f68e32368dd49aabda726d93d9349 NA Primary Tumor C3L-07213-01 C3L-07213.miRNA-Seq.T C3L-07213 GBM miRNA-Seq tumor CPT0407970007 210702_UNC32-K00270_0289_AHKJ22BBXY_ACAGTG_S1_L005_R1_001.unaln.bam 169566636 BAM NA c43fded4-9ae9-4cbf-a391-af4b6106e8ba c6f3be2e9f3230493bb570c6860624da NA Primary Tumor C3L-07213-01 @@ -20728,34 +20235,6 @@ C3N-00169.WXS.N C3N-00169 LUAD WXS blood_normal CPT0016620002 CPT0016620002.Whol C3N-00169.WXS.N.hg38 C3N-00169 LUAD WXS blood_normal CPT0016620002 5b628c05-f250-42e1-a4fb-51bc68e3290e_gdc_realn.bam 40775738887 BAM NA 9747802e-c40f-45cc-b79f-d5308141b839 95fab9c6c4e23683f38dcbeb054480f3 hg38 Blood Derived Normal C3N-00169-31 C3N-00169.WXS.T C3N-00169 LUAD WXS tumor CPT0014860009 CPT0014860009.WholeExome.RP-1303.bam 24934499360 BAM NA d54aab44-43ef-4987-8b07-9da1f4e40a5f c68b1093f45831e2bfa7b73294b7d867 hg19 Primary Tumor C3N-00169-03 C3N-00169.WXS.T.hg38 C3N-00169 LUAD WXS tumor CPT0014860009 c46cbf07-918a-4264-bc21-21c0b95befd2_gdc_realn.bam 34198378303 BAM NA dc29c7ad-da85-4dbe-84ba-c5fdaa80597e 4dc86c777e069dd9487b2984ab3631e8 hg38 Primary Tumor C3N-00169-03 -C3N-00171.MethArray.Green.T C3N-00171 SAR Methylation Array tumor CPT0013730009 202178770083_R08C01_Grn.idat 13676231 IDAT Green 70fa38e8-054c-4509-8380-ae62c653d514 87927bbe736f480c720a3d8cfba802fa NA Primary Tumor C3N-00171-03 -C3N-00171.MethArray.Red.T C3N-00171 SAR Methylation Array tumor CPT0013730009 202178770083_R08C01_Red.idat 13676231 IDAT Red f3859385-f9f1-4301-8b38-cf6582e5b30c eb55c09af353cb2a4d717d7275c49236 NA Primary Tumor C3N-00171-03 -C3N-00171.miRNA-Seq.A C3N-00171 SAR miRNA-Seq tissue_normal CPT0013750009 181113_UNC31-K00269_0164_AH23NNBBXY_CTCAGA_S16_L005_R1_001.unaln.bam 233718266 BAM NA 5bfc0c41-ce9b-4a5a-b21e-249de6dae4bf 0b87bced306395a20c5224f27d89f73f NA Solid Tissue Normal C3N-00171-06 -C3N-00171.miRNA-Seq.A.hg38 C3N-00171 SAR miRNA-Seq tissue_normal CPT0013750009 cdd7e279-6da6-4c82-8efb-68466180a5a6_mirnaseq_gdc_realn.bam 269705616 BAM NA 488058f0-c741-4a15-a7ec-ea4d82047feb fa6e9eebdc4a029a5002da085de32d29 hg38 Solid Tissue Normal C3N-00171-06 -C3N-00171.miRNA-Seq.T C3N-00171 SAR miRNA-Seq tumor CPT0013730006 180924_UNC31-K00269_0154_AHWTMLBBXX_AGTCAA_S18_L001_R1_001.unaln.bam 208467955 BAM NA 55e4bb24-de27-41f4-befd-6b1e69e73f60 3c8906c02a9a378588047a3179be486a NA Primary Tumor C3N-00171-03 -C3N-00171.miRNA-Seq.T.hg38 C3N-00171 SAR miRNA-Seq tumor CPT0013730006 c6979db7-ce49-4573-acd8-a97e68016400_mirnaseq_gdc_realn.bam 224009016 BAM NA 6b4971e0-7f02-47b2-b581-b560f74ee562 a2f4f97b239bf422d1365043961fccd9 hg38 Primary Tumor C3N-00171-03 -C3N-00171.RNA-Seq.chimeric.A.hg38 C3N-00171 SAR RNA-Seq tissue_normal CPT0013750009 f335bec5-453d-47ce-b9ae-0c87e2861d81.rna_seq.chimeric.gdc_realn.bam 24590986 BAM chimeric 793112f3-bb5b-41ce-b84a-f11bd79da81a 1b05551db6f8e015456f9928d331442f hg38 Solid Tissue Normal C3N-00171-06 -C3N-00171.RNA-Seq.chimeric.T.hg38 C3N-00171 SAR RNA-Seq tumor CPT0013730006 42423070-840e-4d83-a50b-0a880aef3b06.rna_seq.chimeric.gdc_realn.bam 44461267 BAM chimeric 7855fbad-7f03-4bad-9343-eb4b7e5453ff 40b10aebeaf423726b016d560862f498 hg38 Primary Tumor C3N-00171-03 -C3N-00171.RNA-Seq.genomic.A.hg38 C3N-00171 SAR RNA-Seq tissue_normal CPT0013750009 f335bec5-453d-47ce-b9ae-0c87e2861d81.rna_seq.genomic.gdc_realn.bam 5862537055 BAM genomic 9d23bcc8-e3c2-4aed-8d94-4675a0929062 72115b8400a46a55a8ebd6e72732877f hg38 Solid Tissue Normal C3N-00171-06 -C3N-00171.RNA-Seq.genomic.T.hg38 C3N-00171 SAR RNA-Seq tumor CPT0013730006 42423070-840e-4d83-a50b-0a880aef3b06.rna_seq.genomic.gdc_realn.bam 9161149919 BAM genomic d0b2f772-5903-444e-b08b-2d8ced2d8769 76b202982ccf1f58f9c62bcd11c3f462 hg38 Primary Tumor C3N-00171-03 -C3N-00171.RNA-Seq.R1.A C3N-00171 SAR RNA-Seq tissue_normal CPT0013750009 180606_UNC32-K00270_0097_AHVCKFBBXX_CCGTCC_S23_L006_R1_001.fastq.gz 3035627976 FASTQ NA 7d6ff25b-a8eb-40de-93be-70f2e154065c 7fcc1a468c9a49ef315e485d8c2b1c1c NA Solid Tissue Normal C3N-00171-06 -C3N-00171.RNA-Seq.R1.T C3N-00171 SAR RNA-Seq tumor CPT0013730006 170823_UNC31-K00269_0076_BHLCTFBBXX_GAGTGG_S8_L007_R1_001.fastq.gz 4328058511 FASTQ NA 938ded1a-3a4a-4b4d-8112-547c7533af56 364d5a5a1aba354c8f0d2529f6af3e7c NA Primary Tumor C3N-00171-03 -C3N-00171.RNA-Seq.R2.A C3N-00171 SAR RNA-Seq tissue_normal CPT0013750009 180606_UNC32-K00270_0097_AHVCKFBBXX_CCGTCC_S23_L006_R2_001.fastq.gz 3173453079 FASTQ NA 07407c27-3dde-48ac-907f-86362ed08ed8 e0edc67f6ff88964da64b4c7aee4a98b NA Solid Tissue Normal C3N-00171-06 -C3N-00171.RNA-Seq.R2.T C3N-00171 SAR RNA-Seq tumor CPT0013730006 170823_UNC31-K00269_0076_BHLCTFBBXX_GAGTGG_S8_L007_R2_001.fastq.gz 4686422369 FASTQ NA 904f9d17-81c9-4fce-a956-3a5351692ebe e33c2e58252e7d9067117b5ee69360c0 NA Primary Tumor C3N-00171-03 -C3N-00171.RNA-Seq.transcriptome.A.hg38 C3N-00171 SAR RNA-Seq tissue_normal CPT0013750009 f335bec5-453d-47ce-b9ae-0c87e2861d81.rna_seq.transcriptome.gdc_realn.bam 12593444088 BAM transcriptome eaa5bc2b-a1e0-4096-b284-e6f4e215fe99 99c734ff4689299f50eccd7b76f94bd1 hg38 Solid Tissue Normal C3N-00171-06 -C3N-00171.RNA-Seq.transcriptome.T.hg38 C3N-00171 SAR RNA-Seq tumor CPT0013730006 42423070-840e-4d83-a50b-0a880aef3b06.rna_seq.transcriptome.gdc_realn.bam 14404302319 BAM transcriptome 64685832-d1e8-4851-bb41-2714751ad770 d4268d031e0696b909ee311c68568ddb hg38 Primary Tumor C3N-00171-03 -C3N-00171.WGS.A C3N-00171 SAR WGS tissue_normal CPT0013750006 CPT0013750006.WholeGenome.RP-1303.bam 58594526252 BAM NA ee11e89d-a140-431f-a597-9e143ce399f4 3c2fc552565e2d15b619985dc4bc32b5 hg19 Solid Tissue Normal C3N-00171-06 -C3N-00171.WGS.A.hg38 C3N-00171 SAR WGS tissue_normal CPT0013750006 0d3ad58d-78fb-4660-992d-07ee61e348a7_wgs_gdc_realn.bam 85261686944 BAM NA 8e3fc6fb-9e5c-4d24-bbf3-3015b32de14b d158eddf446f661312e5c909f3595237 hg38 Solid Tissue Normal C3N-00171-06 -C3N-00171.WGS.N C3N-00171 SAR WGS blood_normal CPT0016520002 CPT0016520002.WholeGenome.RP-1303.bam 72948229053 BAM NA 58f5c4c7-a51e-4bc4-b62e-8f4e37c067be 7c735bd4af50c6d53315a2fa6ebea209 hg19 Blood Derived Normal C3N-00171-31 -C3N-00171.WGS.N.hg38 C3N-00171 SAR WGS blood_normal CPT0016520002 daf35038-d6a8-47af-9b7e-86430aaa0f5e_gdc_realn.bam 108470912388 BAM NA df4caa34-f2e5-42f8-8186-e278a22e17ad 801a43d43347ca9e64271089929622d8 hg38 Blood Derived Normal C3N-00171-31 -C3N-00171.WGS.T C3N-00171 SAR WGS tumor CPT0013730009 CPT0013730009.WholeGenome.RP-1303.bam 69520153193 BAM NA 33e6e06b-3ef8-4893-879c-435504ba8eb5 a75a3c0e3cebeae9f482e5d04bb16dfa hg19 Primary Tumor C3N-00171-03 -C3N-00171.WGS.T.hg38 C3N-00171 SAR WGS tumor CPT0013730009 52cbf23d-a707-461d-913a-a2dd6bec44cc_gdc_realn.bam 103855133932 BAM NA 0206c5af-c18d-4b04-a9d5-4de925d864dc 8cb9e4a80c2e42f8044593b515e1a0dd hg38 Primary Tumor C3N-00171-03 -C3N-00171.WXS.A C3N-00171 SAR WXS tissue_normal CPT0013750006 CPT0013750006.WholeExome.RP-1303.bam 32826144872 BAM NA 682bb578-2104-48cc-8a8f-7671f76b4370 313e011509b4ca0c44488b7b07970416 hg19 Solid Tissue Normal C3N-00171-06 -C3N-00171.WXS.A.hg38 C3N-00171 SAR WXS tissue_normal CPT0013750006 0d3ad58d-78fb-4660-992d-07ee61e348a7_wxs_gdc_realn.bam 43685043987 BAM NA 303fffcd-8473-4e40-8d58-b98650070680 be0752f7ab9b82ceb2e3f2e61b86b992 hg38 Solid Tissue Normal C3N-00171-06 -C3N-00171.WXS.N C3N-00171 SAR WXS blood_normal CPT0016520002 CPT0016520002.WholeExome.RP-1303.bam 30714416614 BAM NA 6f02ac5d-e9f4-42ac-83ba-a4788e9db8b8 a23a795c70685c87ebc69ded6fe62f41 hg19 Blood Derived Normal C3N-00171-31 -C3N-00171.WXS.N.hg38 C3N-00171 SAR WXS blood_normal CPT0016520002 daf35038-d6a8-47af-9b7e-86430aaa0f5e_gdc_realn.bam 42011794282 BAM NA 1ce78252-274a-4829-a063-024ddb7bd220 1f0d4754356672faec2c8049e8369483 hg38 Blood Derived Normal C3N-00171-31 -C3N-00171.WXS.T C3N-00171 SAR WXS tumor CPT0013730009 CPT0013730009.WholeExome.RP-1303.bam 60047050972 BAM NA 25ca14d5-97a4-49d6-afba-bf4e1d837ff4 c6fa3191976d7e4851722c8a945c9315 hg19 Primary Tumor C3N-00171-03 -C3N-00171.WXS.T.hg38 C3N-00171 SAR WXS tumor CPT0013730009 52cbf23d-a707-461d-913a-a2dd6bec44cc_gdc_realn.bam 83101575467 BAM NA 3a8be450-7717-4a66-a72f-ed6135ec2faf 09f9acf80a4854c3b84806ce64976cbb hg38 Primary Tumor C3N-00171-03 C3N-00175.MethArray.Green.A C3N-00175 LUAD Methylation Array tissue_normal CPT0013910008 203028200034_R07C01_Grn.idat 13676226 IDAT Green d94d4809-a27e-461d-8eef-e43e7ca1a08d b0814297889cfaba53c1ef36064a8e48 NA Solid Tissue Normal C3N-00175-06 C3N-00175.MethArray.Green.T C3N-00175 LUAD Methylation Array tumor CPT0013880009 202176290047_R08C01_Grn.idat 13676226 IDAT Green 28205800-4b06-4ef8-9ac4-3ca14be784bb d72cdb79543082c2cf0fe3fd075de67d NA Primary Tumor C3N-00175-02 C3N-00175.MethArray.Red.A C3N-00175 LUAD Methylation Array tissue_normal CPT0013910008 203028200034_R07C01_Red.idat 13676226 IDAT Red d925f7d1-de6c-449b-bc8f-310856a3e005 0b6ce9e8f41a220192d7a2b5f9413890 NA Solid Tissue Normal C3N-00175-06 @@ -21469,23 +20948,6 @@ C3N-00299.WXS.N C3N-00299 HNSCC WXS blood_normal CPT0008670002 CPT0008670002.Who C3N-00299.WXS.N.hg38 C3N-00299 HNSCC WXS blood_normal CPT0008670002 777ac78e-f376-43e8-833c-3f1706ff74b8_gdc_realn.bam 41823840347 BAM NA b00b3046-f5d5-407b-8b0d-cb255cd77b2d 428fb5be10182321485ab319c9ebcd5e hg38 Blood Derived Normal C3N-00299-31 C3N-00299.WXS.T C3N-00299 HNSCC WXS tumor CPT0008630006 CPT0008630006.WholeExome.RP-1303.bam 33803647775 BAM NA 8418ea22-deb0-448d-8692-e536cf7becf9 d3cff289c693d0016aabe0541e1e5c0c hg19 Primary Tumor C3N-00299-02 C3N-00299.WXS.T.hg38 C3N-00299 HNSCC WXS tumor CPT0008630006 a0d54515-7b4c-476e-8f0a-1bc4c22acd39_gdc_realn.bam 46802692357 BAM NA 14615c74-e394-46a8-b1c3-ed6f49819246 3dbe7a9caa9255b2ed44be18178113eb hg38 Primary Tumor C3N-00299-02 -C3N-00300.MethArray.Green.T C3N-00300 HNSCC Methylation Array tumor CPT0008680006 202176290087_R03C01_Grn.idat 13676216 IDAT Green 1d88b263-3bab-429a-ac51-f50643ee7d16 d41fff8148119cc6975e979dc78059b6 NA Primary Tumor C3N-00300-01 -C3N-00300.MethArray.Red.T C3N-00300 HNSCC Methylation Array tumor CPT0008680006 202176290087_R03C01_Red.idat 13676216 IDAT Red a2395868-08f1-4c2a-9c27-4bc422882b5d fcffaac57480346b079e9e3a90a64601 NA Primary Tumor C3N-00300-01 -C3N-00300.miRNA-Seq.T C3N-00300 HNSCC miRNA-Seq tumor CPT0008680009 190813_UNC32-K00270_0196_AH5MCWBBXY_CTCAGA_S1_L001_R1_001.unaln.bam 193762858 BAM NA 61270c76-59b5-4fc6-abe2-f10b32924464 c2a745cca944fe629f7e5a98c91262d0 NA Primary Tumor C3N-00300-01 -C3N-00300.miRNA-Seq.T.hg38 C3N-00300 HNSCC miRNA-Seq tumor CPT0008680009 62d32a82-5fce-4acc-a637-6b04f0d114c3_mirnaseq_gdc_realn.bam 215369238 BAM NA e0f74d20-19c6-4da1-a832-ed44e61ad158 4395af5aa458ba81ae5189dba3914dcc hg38 Primary Tumor C3N-00300-01 -C3N-00300.RNA-Seq.chimeric.T.hg38 C3N-00300 HNSCC RNA-Seq tumor CPT0008680009 81d9d640-6d2e-4e09-a135-dbf0c2ebdb6f.rna_seq.chimeric.gdc_realn.bam 78080508 BAM chimeric d3702a9b-165c-4d1f-b606-00fb4091cc92 94864237ca995c91712bd7a194f99504 hg38 Primary Tumor C3N-00300-01 -C3N-00300.RNA-Seq.genomic.T.hg38 C3N-00300 HNSCC RNA-Seq tumor CPT0008680009 81d9d640-6d2e-4e09-a135-dbf0c2ebdb6f.rna_seq.genomic.gdc_realn.bam 9476799409 BAM genomic 88145fd7-c00f-45c3-b768-7c3250db9c2e d121387f61c7802131849f86f32c1b13 hg38 Primary Tumor C3N-00300-01 -C3N-00300.RNA-Seq.R1.T C3N-00300 HNSCC RNA-Seq tumor CPT0008680009 170802_UNC31-K00269_0072_AHK3GVBBXX_GCCAAT_S2_L008_R1_001.fastq.gz 4159030214 FASTQ NA b12e86cf-85b2-435c-88d0-0df9bcd5c49a 62dcfb8cb80b01791d216d6dbfbe9da0 NA Primary Tumor C3N-00300-01 -C3N-00300.RNA-Seq.R2.T C3N-00300 HNSCC RNA-Seq tumor CPT0008680009 170802_UNC31-K00269_0072_AHK3GVBBXX_GCCAAT_S2_L008_R2_001.fastq.gz 4581574345 FASTQ NA c37e8f4b-b040-44bc-b63b-009715a7681c adaebcf792eb68bcf5c908286c06a3b9 NA Primary Tumor C3N-00300-01 -C3N-00300.RNA-Seq.transcriptome.T.hg38 C3N-00300 HNSCC RNA-Seq tumor CPT0008680009 81d9d640-6d2e-4e09-a135-dbf0c2ebdb6f.rna_seq.transcriptome.gdc_realn.bam 11725298067 BAM transcriptome 3e550678-b825-471c-a676-c1c6368dbcea 5481132c9c9af6dae4729b5bf803ef9b hg38 Primary Tumor C3N-00300-01 -C3N-00300.WGS.N C3N-00300 HNSCC WGS blood_normal CPT0008730002 CPT0008730002.WholeGenome.RP-1303.bam 59062997845 BAM NA 6ce181e4-0ad1-4827-8360-54b5e3cf35fe 7fc5192910714b5b3cc80ef92d44f528 hg19 Blood Derived Normal C3N-00300-31 -C3N-00300.WGS.N.hg38 C3N-00300 HNSCC WGS blood_normal CPT0008730002 d8c0a370-514b-424d-84bc-536a64b6853e_gdc_realn.bam 88711230128 BAM NA 0b6fb82c-c893-4c7f-93c3-87d22cfa756c ec1d9193e5837845e97a2efe7e3b6a47 hg38 Blood Derived Normal C3N-00300-31 -C3N-00300.WGS.T C3N-00300 HNSCC WGS tumor CPT0008680006 CPT0008680006.WholeGenome.RP-1303.bam 75539649965 BAM NA 10f2efc9-9e63-4881-b33e-948f70dfe6c9 dececc84f2434fb6aa57da605e643f8e hg19 Primary Tumor C3N-00300-01 -C3N-00300.WGS.T.hg38 C3N-00300 HNSCC WGS tumor CPT0008680006 2c1aca99-82f6-4e30-8b16-868b81fdb845_gdc_realn.bam 112060927695 BAM NA 6cba52e6-e74f-4696-8756-1eee010f0d93 f168d34d97b71e2972edf3080e189a58 hg38 Primary Tumor C3N-00300-01 -C3N-00300.WXS.N C3N-00300 HNSCC WXS blood_normal CPT0008730002 CPT0008730002.WholeExome.RP-1303.bam 28044753853 BAM NA 561892a5-25cc-423b-a041-833e52ae984f 0ce811fc6f4510e423d3f4c4b7568208 hg19 Blood Derived Normal C3N-00300-31 -C3N-00300.WXS.N.hg38 C3N-00300 HNSCC WXS blood_normal CPT0008730002 d8c0a370-514b-424d-84bc-536a64b6853e_gdc_realn.bam 38549566543 BAM NA 8fc15c91-69d1-41bb-97be-03f53392d71b 9f6259aca26011065f90dca28c146791 hg38 Blood Derived Normal C3N-00300-31 -C3N-00300.WXS.T C3N-00300 HNSCC WXS tumor CPT0008680006 CPT0008680006.WholeExome.RP-1303.bam 22692737884 BAM NA 25654329-8444-443b-a15f-e41fac48c0a0 baed79eb909ecc07992863eb578cac2c hg19 Primary Tumor C3N-00300-01 -C3N-00300.WXS.T.hg38 C3N-00300 HNSCC WXS tumor CPT0008680006 2c1aca99-82f6-4e30-8b16-868b81fdb845_gdc_realn.bam 31083528658 BAM NA ed34bc86-1584-49d1-adcd-703965b28c5b c02caca989eb89c4f34c034be32d53ee hg38 Primary Tumor C3N-00300-01 C3N-00302.MethArray.Green.T.DEEP_xGLgAP C3N-00302 PDA Methylation Array tumor CPT0008750012 202184900148_R06C01_Grn.idat 13676246 IDAT Green c833c77d-68ef-4fa7-9ea8-51f8e0d3747a c4d1e1f1e387962b211398a4b350bb3d NA Primary Tumor C3N-00302-02 sample_tag=DEEP_xGLgAP Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00302.MethArray.Red.T.DEEP_xGLgAP C3N-00302 PDA Methylation Array tumor CPT0008750012 202184900148_R06C01_Red.idat 13676246 IDAT Red 2d13c5a4-f1de-48a0-abec-d3f45f9649dd d42872257f96999fb4228275e4f95d8a NA Primary Tumor C3N-00302-02 sample_tag=DEEP_xGLgAP Duplicate item: Additional DNA for PDA Deep Sequencing C3N-00302.miRNA-Seq.T C3N-00302 PDA miRNA-Seq tumor CPT0008750009 181012_UNC32-K00270_0124_AH223CBBXY_CTAGCT_S11_L003_R1_001.unaln.bam 260612851 BAM NA 0196b828-604c-4241-b9ed-bf98ced75253 8198ce1672679cb78b429dc3caf8c7b7 NA Primary Tumor C3N-00302-02 @@ -21831,8 +21293,8 @@ C3N-00314.WXS.T.HET_wmELv8.hg38 C3N-00314 CCRCC WXS tumor CPT0012070011 e684014d C3N-00314.WXS.T.HET_xvVWjl C3N-00314 CCRCC WXS tumor CPT0012060012 CPT0012060012.WholeExome.RP-1303.bam 19612326488 BAM NA d7455846-ff2c-4a9e-9a1e-2fd4a57fa4f1 e336758aa2202151bd61fa53981a1d52 hg19 Primary Tumor C3N-00314-02 sample_tag=HET_xvVWjl Duplicate item: CCRCC Tumor heterogeneity study aliquot C3N-00314.WXS.T.HET_xvVWjl.hg38 C3N-00314 CCRCC WXS tumor CPT0012060012 2d8ad3b1-9758-4bc7-b2a2-fd8a9550ca16_wxs_gdc_realn.bam 26588707002 BAM NA cd1eab3a-b5e5-4c4c-a858-4f1d011ff347 baab2fed92d382a21932359283fa72db hg38 Primary Tumor C3N-00314-02 sample_tag=HET_xvVWjl Duplicate item: CCRCC Tumor heterogeneity study aliquot C3N-00314.WXS.T.hg38 C3N-00314 CCRCC WXS tumor CPT0012080009 8bfede7e-2578-413c-bea6-447f26b9081d_gdc_realn.bam 31511944675 BAM NA ef10ada7-bbcd-4238-be14-931764592a11 4a269391251d265c68bb212ccc06f89b hg38 Primary Tumor C3N-00314-04 -C3N-00315.MethArray.Green.T C3N-00315 CCRCC Methylation Array tumor CPT0012180009 202184990008_R01C01_Grn.idat 13676216 IDAT Green c6963688-370d-4407-864c-6c84f235e36b b5c22010b921e797c18f7c56074d770e NA Primary Tumor C3N-00315-03 -C3N-00315.MethArray.Red.T C3N-00315 CCRCC Methylation Array tumor CPT0012180009 202184990008_R01C01_Red.idat 13676216 IDAT Red b5ce362d-c736-44bb-a34b-9aa9274904e6 e7705317c41b3bb0f80bced6f6908790 NA Primary Tumor C3N-00315-03 +C3N-00315.MethArray.Green.T.UNK_rRgyVp C3N-00315 CCRCC Methylation Array tumor CPT0012180009 202184990008_R01C01_Grn.idat 13676216 IDAT Green c6963688-370d-4407-864c-6c84f235e36b b5c22010b921e797c18f7c56074d770e NA Primary Tumor C3N-00315-03 sample_tag=UNK_rRgyVp The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00315.MethArray.Red.T.UNK_rRgyVp C3N-00315 CCRCC Methylation Array tumor CPT0012180009 202184990008_R01C01_Red.idat 13676216 IDAT Red b5ce362d-c736-44bb-a34b-9aa9274904e6 e7705317c41b3bb0f80bced6f6908790 NA Primary Tumor C3N-00315-03 sample_tag=UNK_rRgyVp The WGS data for this aliquot failed the GDC harmonization pipeline. C3N-00315.miRNA-Seq.T C3N-00315 CCRCC miRNA-Seq tumor CPT0012180006 180924_UNC31-K00269_0154_AHWTMLBBXX_CAACTA_S23_L002_R1_001.unaln.bam 197235238 BAM NA e9467102-2797-4055-ab4e-9453b76bba62 885a462d4af9e16da472faef38b13b15 NA Primary Tumor C3N-00315-03 C3N-00315.miRNA-Seq.T.hg38 C3N-00315 CCRCC miRNA-Seq tumor CPT0012180006 d1f23e30-8d2c-47aa-96af-a3c21b10203a_mirnaseq_gdc_realn.bam 210365606 BAM NA 182ecb2b-b008-4a67-88f3-badf39c4fbc6 56cd4dfbf380559ba487bdb4cbb15a70 hg38 Primary Tumor C3N-00315-03 C3N-00315.RNA-Seq.chimeric.T.hg38 C3N-00315 CCRCC RNA-Seq tumor CPT0012180006 ed0341d8-ee8e-4c97-aebc-acd6a8671f62.rna_seq.chimeric.gdc_realn.bam 83008008 BAM chimeric 73545d64-182b-4d38-b719-43dc554415bd 1b80ade61c32954aac8d1364435685b1 hg38 Primary Tumor C3N-00315-03 @@ -21840,14 +21302,14 @@ C3N-00315.RNA-Seq.genomic.T.hg38 C3N-00315 CCRCC RNA-Seq tumor CPT0012180006 ed0 C3N-00315.RNA-Seq.R1.T C3N-00315 CCRCC RNA-Seq tumor CPT0012180006 170830_UNC31-K00269_0078_AHLCVMBBXX_GTGAAA_S17_L005_R1_001.fastq.gz 4635214588 FASTQ NA 0cc4eef5-1c17-47c0-b859-7f6cffcfd680 7aafb59e1b8450971813ded457fb0a13 NA Primary Tumor C3N-00315-03 C3N-00315.RNA-Seq.R2.T C3N-00315 CCRCC RNA-Seq tumor CPT0012180006 170830_UNC31-K00269_0078_AHLCVMBBXX_GTGAAA_S17_L005_R2_001.fastq.gz 4819981461 FASTQ NA 08d6200f-2755-4eff-b345-7fa1a68d82dc 470a8edbe139edf61c09307742523b59 NA Primary Tumor C3N-00315-03 C3N-00315.RNA-Seq.transcriptome.T.hg38 C3N-00315 CCRCC RNA-Seq tumor CPT0012180006 ed0341d8-ee8e-4c97-aebc-acd6a8671f62.rna_seq.transcriptome.gdc_realn.bam 12420701554 BAM transcriptome 06d27fff-1f9e-4783-8990-677321aaae74 4d4bd84a4c21f188f66306778504440b hg38 Primary Tumor C3N-00315-03 -C3N-00315.WGS.N C3N-00315 CCRCC WGS blood_normal CPT0012240002 CPT0012240002.WholeGenome.RP-1303.bam 62155508227 BAM NA 5bc6879c-0b43-4e73-ad3e-9de9776e75aa 4985ac67e15887adca93fa4f0faec056 hg19 Blood Derived Normal C3N-00315-31 -C3N-00315.WGS.N.hg38 C3N-00315 CCRCC WGS blood_normal CPT0012240002 b9b589dd-9f9d-4b4d-82cd-048378b3101a_gdc_realn.bam 90812352968 BAM NA 45243e54-a9f8-4db6-b6dd-20baf0df9705 ac8b00e27f89a429eb2369bb67bd4405 hg38 Blood Derived Normal C3N-00315-31 -C3N-00315.WGS.T C3N-00315 CCRCC WGS tumor CPT0012180009 CPT0012180009.WholeGenome.RP-1303.bam 61828501333 BAM NA 8b4793e8-d3b8-4ad0-9237-d6e9b36a2017 689681e61ce6835cbd72fcf8496ae63b hg19 Primary Tumor C3N-00315-03 -C3N-00315.WGS.T.hg38 C3N-00315 CCRCC WGS tumor CPT0012180009 3e8cabbe-d332-47b7-b864-438a8f28f62a_gdc_realn.bam 90584739284 BAM NA 0b50e4c3-271b-4c40-a795-80b3e8ab79b4 00eb67988fb705cb50714a4303e72fc7 hg38 Primary Tumor C3N-00315-03 -C3N-00315.WXS.N C3N-00315 CCRCC WXS blood_normal CPT0012240002 CPT0012240002.WholeExome.RP-1303.bam 24457273067 BAM NA 4472e814-ca77-4871-9556-b6ff2503d700 c70edbd9356943bcde0f0f5a1837a22b hg19 Blood Derived Normal C3N-00315-31 -C3N-00315.WXS.N.hg38 C3N-00315 CCRCC WXS blood_normal CPT0012240002 b9b589dd-9f9d-4b4d-82cd-048378b3101a_gdc_realn.bam 33497000704 BAM NA 68af6901-66a3-4912-8f6f-6d32e00889aa 964e718e9a99fbc3a538d06569f9cbd7 hg38 Blood Derived Normal C3N-00315-31 -C3N-00315.WXS.T C3N-00315 CCRCC WXS tumor CPT0012180009 CPT0012180009.WholeExome.RP-1303.bam 23719768591 BAM NA 4922eee1-32f4-456d-bda1-e5e92399d691 fcf0fb0caee0d316f036119217843651 hg19 Primary Tumor C3N-00315-03 -C3N-00315.WXS.T.hg38 C3N-00315 CCRCC WXS tumor CPT0012180009 3e8cabbe-d332-47b7-b864-438a8f28f62a_gdc_realn.bam 32566983424 BAM NA aa702074-3079-4da7-a98f-c1fedd424dd3 be10b0a6525c03c40e948f911b7a680b hg38 Primary Tumor C3N-00315-03 +C3N-00315.WGS.N.UNK_kZOvBY C3N-00315 CCRCC WGS blood_normal CPT0012240002 CPT0012240002.WholeGenome.RP-1303.bam 62155508227 BAM NA 5bc6879c-0b43-4e73-ad3e-9de9776e75aa 4985ac67e15887adca93fa4f0faec056 hg19 Blood Derived Normal C3N-00315-31 sample_tag=UNK_kZOvBY The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00315.WGS.N.UNK_kZOvBY.hg38 C3N-00315 CCRCC WGS blood_normal CPT0012240002 b9b589dd-9f9d-4b4d-82cd-048378b3101a_gdc_realn.bam 90812352968 BAM NA 45243e54-a9f8-4db6-b6dd-20baf0df9705 ac8b00e27f89a429eb2369bb67bd4405 hg38 Blood Derived Normal C3N-00315-31 sample_tag=UNK_kZOvBY The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00315.WGS.T.UNK_rRgyVp C3N-00315 CCRCC WGS tumor CPT0012180009 CPT0012180009.WholeGenome.RP-1303.bam 61828501333 BAM NA 8b4793e8-d3b8-4ad0-9237-d6e9b36a2017 689681e61ce6835cbd72fcf8496ae63b hg19 Primary Tumor C3N-00315-03 sample_tag=UNK_rRgyVp The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00315.WGS.T.UNK_rRgyVp.hg38 C3N-00315 CCRCC WGS tumor CPT0012180009 3e8cabbe-d332-47b7-b864-438a8f28f62a_gdc_realn.bam 90584739284 BAM NA 0b50e4c3-271b-4c40-a795-80b3e8ab79b4 00eb67988fb705cb50714a4303e72fc7 hg38 Primary Tumor C3N-00315-03 sample_tag=UNK_rRgyVp The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00315.WXS.N.UNK_kZOvBY C3N-00315 CCRCC WXS blood_normal CPT0012240002 CPT0012240002.WholeExome.RP-1303.bam 24457273067 BAM NA 4472e814-ca77-4871-9556-b6ff2503d700 c70edbd9356943bcde0f0f5a1837a22b hg19 Blood Derived Normal C3N-00315-31 sample_tag=UNK_kZOvBY The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00315.WXS.N.UNK_kZOvBY.hg38 C3N-00315 CCRCC WXS blood_normal CPT0012240002 b9b589dd-9f9d-4b4d-82cd-048378b3101a_gdc_realn.bam 33497000704 BAM NA 68af6901-66a3-4912-8f6f-6d32e00889aa 964e718e9a99fbc3a538d06569f9cbd7 hg38 Blood Derived Normal C3N-00315-31 sample_tag=UNK_kZOvBY The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00315.WXS.T.UNK_rRgyVp C3N-00315 CCRCC WXS tumor CPT0012180009 CPT0012180009.WholeExome.RP-1303.bam 23719768591 BAM NA 4922eee1-32f4-456d-bda1-e5e92399d691 fcf0fb0caee0d316f036119217843651 hg19 Primary Tumor C3N-00315-03 sample_tag=UNK_rRgyVp The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00315.WXS.T.UNK_rRgyVp.hg38 C3N-00315 CCRCC WXS tumor CPT0012180009 3e8cabbe-d332-47b7-b864-438a8f28f62a_gdc_realn.bam 32566983424 BAM NA aa702074-3079-4da7-a98f-c1fedd424dd3 be10b0a6525c03c40e948f911b7a680b hg38 Primary Tumor C3N-00315-03 sample_tag=UNK_rRgyVp The WGS data for this aliquot failed the GDC harmonization pipeline. C3N-00317.MethArray.Green.A C3N-00317 CCRCC Methylation Array tissue_normal CPT0012290009 204930640041_R05C01_Grn.idat 13677885 IDAT Green 998e112c-bbf8-45a6-a254-bfc82873c9b7 60fb1dec3f6a57a1dcf645938996ebbf NA Solid Tissue Normal C3N-00317-05 C3N-00317.MethArray.Green.T C3N-00317 CCRCC Methylation Array tumor CPT0012280009 202184990013_R02C01_Grn.idat 13676226 IDAT Green ecde6749-94d6-41bb-a9ec-76697089e5f1 d042caf608dc9e399d5114270676755b NA Primary Tumor C3N-00317-04 C3N-00317.MethArray.Green.T.HET_xv7PEE C3N-00317 CCRCC Methylation Array tumor CPT0012260012 204367490084_R03C01_Grn.idat 13677890 IDAT Green ea72b685-9d14-4e7a-a516-c23636272d33 cae28665f4c3112fdf6dcf25021df424 NA Primary Tumor C3N-00317-02 sample_tag=HET_xv7PEE Duplicate item: CCRCC Tumor heterogeneity study aliquot @@ -22048,8 +21510,8 @@ C3N-00328.WXS.N C3N-00328 UCEC WXS blood_normal CPT0020410002 CPT0020410002.Whol C3N-00328.WXS.N.hg38 C3N-00328 UCEC WXS blood_normal CPT0020410002 290e3a66-502c-40c7-b6cc-e4783b31bf23_gdc_realn.bam 42755736362 BAM NA 92a6ecef-93d2-4e81-ba10-8c6fa21e412e 51bd93ee130c65e2930d826f7410ae25 hg38 Blood Derived Normal C3N-00328-31 C3N-00328.WXS.T C3N-00328 UCEC WXS tumor CPT0019840009 CPT0019840009.WholeExome.RP-1303.bam 28123357820 BAM NA 57ca5aaa-f52d-46f0-adb6-9cae7b4afeab 581f5559673c24e316299626b375fd81 hg19 Primary Tumor C3N-00328-05 C3N-00328.WXS.T.hg38 C3N-00328 UCEC WXS tumor CPT0019840009 4aec9b8e-d049-435a-8d3f-e17ee190dd8a_gdc_realn.bam 38527121565 BAM NA c1d2d417-5a50-4534-8ae1-fc69aca45772 4967c2fdf0f28cf0e507bebcf0b4f6ce hg38 Primary Tumor C3N-00328-05 -C3N-00333.MethArray.Green.T C3N-00333 UCEC Methylation Array tumor CPT0011000006 202178770143_R03C01_Grn.idat 13676241 IDAT Green 763958ac-1799-4e0d-afb3-309f81cdc6bb 8a020927457e1847bd2bb1a6263ed117 NA Primary Tumor C3N-00333-03 -C3N-00333.MethArray.Red.T C3N-00333 UCEC Methylation Array tumor CPT0011000006 202178770143_R03C01_Red.idat 13676241 IDAT Red ace92bf5-0386-4e08-8aac-6dd8ba791427 41d26d995f985c13aec2dadc93552494 NA Primary Tumor C3N-00333-03 +C3N-00333.MethArray.Green.T.UNK_oYEZwj C3N-00333 UCEC Methylation Array tumor CPT0011000006 202178770143_R03C01_Grn.idat 13676241 IDAT Green 763958ac-1799-4e0d-afb3-309f81cdc6bb 8a020927457e1847bd2bb1a6263ed117 NA Primary Tumor C3N-00333-03 sample_tag=UNK_oYEZwj The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00333.MethArray.Red.T.UNK_oYEZwj C3N-00333 UCEC Methylation Array tumor CPT0011000006 202178770143_R03C01_Red.idat 13676241 IDAT Red ace92bf5-0386-4e08-8aac-6dd8ba791427 41d26d995f985c13aec2dadc93552494 NA Primary Tumor C3N-00333-03 sample_tag=UNK_oYEZwj The WGS data for this aliquot failed the GDC harmonization pipeline. C3N-00333.miRNA-Seq.A C3N-00333 UCEC miRNA-Seq tissue_normal CPT0011020005 181108_UNC31-K00269_0162_AH255GBBXY_CTCAGA_S16_L007_R1_001.unaln.bam 257167650 BAM NA 6ebf4622-e23e-4d45-bca3-c49a599bb3c5 ac128e23e832ad0fc637dab3ead7be99 NA Solid Tissue Normal C3N-00333-07 C3N-00333.miRNA-Seq.A.hg38 C3N-00333 UCEC miRNA-Seq tissue_normal CPT0011020005 66702502-f018-407d-9599-e6a56426bd9e_mirnaseq_gdc_realn.bam 295518634 BAM NA 4d893e44-fdd9-4693-ad26-a735da8821d7 a13d22c3d855295975517e38f782fd82 hg38 Solid Tissue Normal C3N-00333-07 C3N-00333.miRNA-Seq.T C3N-00333 UCEC miRNA-Seq tumor CPT0011000009 181012_UNC32-K00270_0124_AH223CBBXY_GGTAGC_S44_L003_R1_001.unaln.bam 247649696 BAM NA f5830d0b-f49c-4b79-ad31-dbc65f760ccc 596f65272dad9c9be754b0330f72e737 NA Primary Tumor C3N-00333-03 @@ -22064,14 +21526,14 @@ C3N-00333.RNA-Seq.R2.A C3N-00333 UCEC RNA-Seq tissue_normal CPT0011020005 171215 C3N-00333.RNA-Seq.R2.T C3N-00333 UCEC RNA-Seq tumor CPT0011000009 170818_UNC32-K00270_0050_AHL2FHBBXX_TGACCA_S22_L008_R2_001.fastq.gz 4348896874 FASTQ NA ae764c5a-f0ca-4a2e-b08e-ef1a65ddfe20 5fab770863eb22a663e333467336a837 NA Primary Tumor C3N-00333-03 C3N-00333.RNA-Seq.transcriptome.A.hg38 C3N-00333 UCEC RNA-Seq tissue_normal CPT0011020005 21c23e1b-93c9-4c03-8fa5-f545c5e0edea.rna_seq.transcriptome.gdc_realn.bam 9762539265 BAM transcriptome caa533d8-0ae6-4415-9fe7-17c0f3f4b67a ee530dd29dde2a5db479bcc85f373dcb hg38 Solid Tissue Normal C3N-00333-07 C3N-00333.RNA-Seq.transcriptome.T.hg38 C3N-00333 UCEC RNA-Seq tumor CPT0011000009 bcb03eb3-000b-403f-92b3-2732802dd9e0.rna_seq.transcriptome.gdc_realn.bam 10865660521 BAM transcriptome 0e052b35-eb2c-412c-80a8-34df49d292ce ea409ba57c360bab29b0fcf7783238e7 hg38 Primary Tumor C3N-00333-03 -C3N-00333.WGS.N C3N-00333 UCEC WGS blood_normal CPT0011100002 CPT0011100002.WholeGenome.RP-1303.bam 62707497278 BAM NA 96d7fbca-f386-4e59-bd26-a6476f2ff9ee f16893e7632210e855f2c1f58c51ca13 hg19 Blood Derived Normal C3N-00333-31 -C3N-00333.WGS.N.hg38 C3N-00333 UCEC WGS blood_normal CPT0011100002 d6e45feb-9d72-474c-9d5b-a0b8d6c4dc8c_gdc_realn.bam 91414830757 BAM NA 1fdfd239-41aa-4c8d-8b8b-c84d4b525d67 e1ff420187183e10157ff4a61f87dcfd hg38 Blood Derived Normal C3N-00333-31 -C3N-00333.WGS.T C3N-00333 UCEC WGS tumor CPT0011000006 CPT0011000006.WholeGenome.RP-1303.bam 64713010105 BAM NA ec57c574-59cf-40a3-9793-cdaf519abc29 fa3ab00d1a793878f1faed480609fdd2 hg19 Primary Tumor C3N-00333-03 -C3N-00333.WGS.T.hg38 C3N-00333 UCEC WGS tumor CPT0011000006 deec3429-33f4-4946-a550-66acc74ee372_gdc_realn.bam 95053986433 BAM NA 3c2dee34-a0e2-4ee0-9ed1-3bb9405c0070 0f676a29275b2127edd72d692bdae400 hg38 Primary Tumor C3N-00333-03 -C3N-00333.WXS.N C3N-00333 UCEC WXS blood_normal CPT0011100002 CPT0011100002.WholeExome.RP-1303.bam 28432273162 BAM NA 59cf4caf-2c41-4390-93cf-51f4dbeef3af 3b82dadf77131871e0f8e59e71c1b84e hg19 Blood Derived Normal C3N-00333-31 -C3N-00333.WXS.N.hg38 C3N-00333 UCEC WXS blood_normal CPT0011100002 d6e45feb-9d72-474c-9d5b-a0b8d6c4dc8c_gdc_realn.bam 38875383146 BAM NA cf748e44-e144-4034-ad2e-99d431d3be22 ca3af28280bb7e862bfc98a65b5fda4e hg38 Blood Derived Normal C3N-00333-31 -C3N-00333.WXS.T C3N-00333 UCEC WXS tumor CPT0011000006 CPT0011000006.WholeExome.RP-1303.bam 24938539301 BAM NA 9deb7257-8b5f-4f3a-81f5-13f84026f6f9 a84910ad538040c434b5dbb3378ac508 hg19 Primary Tumor C3N-00333-03 -C3N-00333.WXS.T.hg38 C3N-00333 UCEC WXS tumor CPT0011000006 deec3429-33f4-4946-a550-66acc74ee372_gdc_realn.bam 33961919756 BAM NA a8e8fff3-176e-4b6d-a138-ce8079f4951c bccb95206c87de97f6a29c3ad72c596c hg38 Primary Tumor C3N-00333-03 +C3N-00333.WGS.N.UNK_k5JBlE C3N-00333 UCEC WGS blood_normal CPT0011100002 CPT0011100002.WholeGenome.RP-1303.bam 62707497278 BAM NA 96d7fbca-f386-4e59-bd26-a6476f2ff9ee f16893e7632210e855f2c1f58c51ca13 hg19 Blood Derived Normal C3N-00333-31 sample_tag=UNK_k5JBlE The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00333.WGS.N.UNK_k5JBlE.hg38 C3N-00333 UCEC WGS blood_normal CPT0011100002 d6e45feb-9d72-474c-9d5b-a0b8d6c4dc8c_gdc_realn.bam 91414830757 BAM NA 1fdfd239-41aa-4c8d-8b8b-c84d4b525d67 e1ff420187183e10157ff4a61f87dcfd hg38 Blood Derived Normal C3N-00333-31 sample_tag=UNK_k5JBlE The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00333.WGS.T.UNK_oYEZwj C3N-00333 UCEC WGS tumor CPT0011000006 CPT0011000006.WholeGenome.RP-1303.bam 64713010105 BAM NA ec57c574-59cf-40a3-9793-cdaf519abc29 fa3ab00d1a793878f1faed480609fdd2 hg19 Primary Tumor C3N-00333-03 sample_tag=UNK_oYEZwj The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00333.WGS.T.UNK_oYEZwj.hg38 C3N-00333 UCEC WGS tumor CPT0011000006 deec3429-33f4-4946-a550-66acc74ee372_gdc_realn.bam 95053986433 BAM NA 3c2dee34-a0e2-4ee0-9ed1-3bb9405c0070 0f676a29275b2127edd72d692bdae400 hg38 Primary Tumor C3N-00333-03 sample_tag=UNK_oYEZwj The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00333.WXS.N.UNK_k5JBlE C3N-00333 UCEC WXS blood_normal CPT0011100002 CPT0011100002.WholeExome.RP-1303.bam 28432273162 BAM NA 59cf4caf-2c41-4390-93cf-51f4dbeef3af 3b82dadf77131871e0f8e59e71c1b84e hg19 Blood Derived Normal C3N-00333-31 sample_tag=UNK_k5JBlE The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00333.WXS.N.UNK_k5JBlE.hg38 C3N-00333 UCEC WXS blood_normal CPT0011100002 d6e45feb-9d72-474c-9d5b-a0b8d6c4dc8c_gdc_realn.bam 38875383146 BAM NA cf748e44-e144-4034-ad2e-99d431d3be22 ca3af28280bb7e862bfc98a65b5fda4e hg38 Blood Derived Normal C3N-00333-31 sample_tag=UNK_k5JBlE The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00333.WXS.T.UNK_oYEZwj C3N-00333 UCEC WXS tumor CPT0011000006 CPT0011000006.WholeExome.RP-1303.bam 24938539301 BAM NA 9deb7257-8b5f-4f3a-81f5-13f84026f6f9 a84910ad538040c434b5dbb3378ac508 hg19 Primary Tumor C3N-00333-03 sample_tag=UNK_oYEZwj The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00333.WXS.T.UNK_oYEZwj.hg38 C3N-00333 UCEC WXS tumor CPT0011000006 deec3429-33f4-4946-a550-66acc74ee372_gdc_realn.bam 33961919756 BAM NA a8e8fff3-176e-4b6d-a138-ce8079f4951c bccb95206c87de97f6a29c3ad72c596c hg38 Primary Tumor C3N-00333-03 sample_tag=UNK_oYEZwj The WGS data for this aliquot failed the GDC harmonization pipeline. C3N-00334.MethArray.Green.T C3N-00334 UCEC Methylation Array tumor CPT0018570006 202163550076_R01C01_Grn.idat 13676226 IDAT Green a40eb019-0924-48ba-bd2f-7c418248895e c3db7a73d84281e44b3aabcfc4c6f841 NA Primary Tumor C3N-00334-02 C3N-00334.MethArray.Red.T C3N-00334 UCEC Methylation Array tumor CPT0018570006 202163550076_R01C01_Red.idat 13676226 IDAT Red 874636d0-e6ca-46f3-bff9-4a3d06884913 57502bd78527e028665be63aea2d2f82 NA Primary Tumor C3N-00334-02 C3N-00334.miRNA-Seq.T C3N-00334 UCEC miRNA-Seq tumor CPT0018570009 181012_UNC32-K00270_0124_AH223CBBXY_CACCGG_S3_L003_R1_001.unaln.bam 176382643 BAM NA 7121a1a5-158e-4b8a-a9ae-b15452f69f8a a7348513c6798ba8d79d48c076721199 NA Primary Tumor C3N-00334-02 @@ -22208,23 +21670,6 @@ C3N-00380.WXS.N C3N-00380 CCRCC WXS blood_normal CPT0021300002 CPT0021300002.Who C3N-00380.WXS.N.hg38 C3N-00380 CCRCC WXS blood_normal CPT0021300002 f6488f85-101a-4703-af6d-d7a024f8294f_gdc_realn.bam 29225050475 BAM NA d608689d-02ca-414d-968d-ae8a9256ebe0 04e8e25e3819663ddad032769f2c67b8 hg38 Blood Derived Normal C3N-00380-71 C3N-00380.WXS.T C3N-00380 CCRCC WXS tumor CPT0021240009 CPT0021240009.WholeExome.RP-1303.bam 28875237553 BAM NA d713a110-92e9-46e6-8bf1-990ce88179cc 41945b64cd428b36c5116209d5e36497 hg19 Primary Tumor C3N-00380-01 C3N-00380.WXS.T.hg38 C3N-00380 CCRCC WXS tumor CPT0021240009 80e3b7fb-78b0-4ea8-9792-264a50cab826_gdc_realn.bam 39445228936 BAM NA a8238352-f2db-4c2d-889e-998368b4d1ff 99c9989181e2d4210824e04340f40a89 hg38 Primary Tumor C3N-00380-01 -C3N-00382.MethArray.Green.T C3N-00382 CM Methylation Array tumor CPT0022770007 202234380050_R01C01_Grn.idat 13676231 IDAT Green 854318a6-cb54-48b3-b78a-81f17caf72ac 74625feac7afec5c2c04086a86e8b2d7 NA Primary Tumor C3N-00382-03 -C3N-00382.MethArray.Red.T C3N-00382 CM Methylation Array tumor CPT0022770007 202234380050_R01C01_Red.idat 13676231 IDAT Red 2073ed43-0efa-4579-aa74-b8e23a3ef6d9 cc7950953403de4a7cdc881127c31df1 NA Primary Tumor C3N-00382-03 -C3N-00382.miRNA-Seq.T C3N-00382 CM miRNA-Seq tumor CPT0022770010 181119_UNC31-K00269_0165_AH27WCBBXY_CATTTT_S11_L004_R1_001.unaln.bam 202135569 BAM NA 54fc596d-16d1-439f-9137-c71226e05dde 368cba1a415f1a52e89d92f5cd7ee2c1 NA Primary Tumor C3N-00382-03 -C3N-00382.miRNA-Seq.T.hg38 C3N-00382 CM miRNA-Seq tumor CPT0022770010 788c4e1e-795d-4032-b3d6-b8bf3459f62e_mirnaseq_gdc_realn.bam 214887362 BAM NA 420ccb2b-6acb-4983-9314-b5f9a76a21ce fc32bd81dca93d285909f64b12043138 hg38 Primary Tumor C3N-00382-03 -C3N-00382.RNA-Seq.chimeric.T.hg38 C3N-00382 CM RNA-Seq tumor CPT0022770010 e0267a2d-58a7-4583-9399-af5a64a52c06.rna_seq.chimeric.gdc_realn.bam 55070069 BAM chimeric 2b9c4f19-ce8d-4968-9c8b-dc87c56c5698 347da09fe4c6c9cbe6a9eba1be185143 hg38 Primary Tumor C3N-00382-03 -C3N-00382.RNA-Seq.genomic.T.hg38 C3N-00382 CM RNA-Seq tumor CPT0022770010 e0267a2d-58a7-4583-9399-af5a64a52c06.rna_seq.genomic.gdc_realn.bam 9847560736 BAM genomic a68c5baf-3efd-4275-839b-e4f6718c5e05 0a2a6982abc4779331dce61b24806821 hg38 Primary Tumor C3N-00382-03 -C3N-00382.RNA-Seq.R1.T C3N-00382 CM RNA-Seq tumor CPT0022770010 171116_UNC31-K00269_0093_BHMFKJBBXX_AGTCAA_S5_L008_R1_001.fastq.gz 3801746517 FASTQ NA 6877d968-d129-4072-b29c-d74dfdbda75e 64e9e7d38269f7bcbef24f3640742565 NA Primary Tumor C3N-00382-03 -C3N-00382.RNA-Seq.R2.T C3N-00382 CM RNA-Seq tumor CPT0022770010 171116_UNC31-K00269_0093_BHMFKJBBXX_AGTCAA_S5_L008_R2_001.fastq.gz 4208595602 FASTQ NA 27207e9a-86e6-48c9-a7ff-16abacc644b5 006bd74560d3e50d52fc615357e36021 NA Primary Tumor C3N-00382-03 -C3N-00382.RNA-Seq.transcriptome.T.hg38 C3N-00382 CM RNA-Seq tumor CPT0022770010 e0267a2d-58a7-4583-9399-af5a64a52c06.rna_seq.transcriptome.gdc_realn.bam 10088726479 BAM transcriptome acecc579-2bdb-4c24-92d3-ceb65dfaed0f e082995af76ee1fb4d29534c19349547 hg38 Primary Tumor C3N-00382-03 -C3N-00382.WGS.N C3N-00382 CM WGS blood_normal CPT0021860002 CPT0021860002.WholeGenome.RP-1303.bam 56486268145 BAM NA 17ee5c32-3c5d-4f1f-8831-e69200843d6f ec7ae42fe7770d496263daf62b018a2b hg19 Blood Derived Normal C3N-00382-31,C3N-00382-72 -C3N-00382.WGS.N.hg38 C3N-00382 CM WGS blood_normal CPT0021860002 3853a6ce-59fd-4379-b185-471e6499ec80_wgs_gdc_realn.bam 84361680382 BAM NA b1064b1b-ac40-492b-9375-7f34c43ea361 75b52979008efc2967c6b9ef160a3b71 hg38 Blood Derived Normal C3N-00382-31,C3N-00382-72 -C3N-00382.WGS.T C3N-00382 CM WGS tumor CPT0022770007 CPT0022770007.WholeGenome.RP-1303.bam 64553690002 BAM NA 78bd3e0d-bae2-496a-a32d-8c395d994cd2 6a797f1701a85a2f0edb55eeb904ee88 hg19 Primary Tumor C3N-00382-03 -C3N-00382.WGS.T.hg38 C3N-00382 CM WGS tumor CPT0022770007 347997fc-5e55-47ad-b479-41e98e7ab4b3_wgs_gdc_realn.bam 92556688094 BAM NA 3136cef4-29aa-48e9-a770-3530893498f0 a69085b64956570337139e2ed0db3ead hg38 Primary Tumor C3N-00382-03 -C3N-00382.WXS.N C3N-00382 CM WXS blood_normal CPT0021860002 CPT0021860002.WholeExome.RP-1303.bam 26701817359 BAM NA e066f876-04f7-474a-b20c-07a2a58817cb dd46bfa247a820ae23eeb11f97596187 hg19 Blood Derived Normal C3N-00382-31,C3N-00382-72 -C3N-00382.WXS.N.hg38 C3N-00382 CM WXS blood_normal CPT0021860002 3853a6ce-59fd-4379-b185-471e6499ec80_wxs_gdc_realn.bam 37167766503 BAM NA a3de9410-f9a9-4f8d-8ae6-4aa373ba6ff5 3a0e06ad48403a40125b099d62e1696d hg38 Blood Derived Normal C3N-00382-31,C3N-00382-72 -C3N-00382.WXS.T C3N-00382 CM WXS tumor CPT0022770007 CPT0022770007.WholeExome.RP-1303.bam 45523920837 BAM NA 0924c76e-8a21-4ed5-857c-cd41bed09389 d7866ba2c18ecd3d37a43c3610114d94 hg19 Primary Tumor C3N-00382-03 -C3N-00382.WXS.T.hg38 C3N-00382 CM WXS tumor CPT0022770007 347997fc-5e55-47ad-b479-41e98e7ab4b3_wxs_gdc_realn.bam 61603254191 BAM NA 9b3af67c-213f-47b4-9d5e-5fbe131e54f5 3c42eea02d11c6b2657eb369cccf91a7 hg38 Primary Tumor C3N-00382-03 C3N-00383.MethArray.Green.T C3N-00383 UCEC Methylation Array tumor CPT0022830006 202184990066_R01C01_Grn.idat 13676216 IDAT Green 549d094d-f346-40a4-b512-16879f811ee1 9322be065450d2f979e5e67fce4b8a7f NA Primary Tumor C3N-00383-04 C3N-00383.MethArray.Red.T C3N-00383 UCEC Methylation Array tumor CPT0022830006 202184990066_R01C01_Red.idat 13676216 IDAT Red cbc1d316-8085-41f3-861e-bf62df5b38c6 23d5b289e1d1e8a5873c0d43139a4528 NA Primary Tumor C3N-00383-04 C3N-00383.miRNA-Seq.A C3N-00383 UCEC miRNA-Seq tissue_normal CPT0022850006 181108_UNC31-K00269_0162_AH255GBBXY_CGGAAT_S13_L006_R1_001.unaln.bam 314111891 BAM NA 48ace26e-347d-4b8a-bd4c-03d6ade40448 83f31070ae06325e33e889028d64ec08 NA Solid Tissue Normal C3N-00383-06 @@ -22253,51 +21698,6 @@ C3N-00383.WXS.N C3N-00383 UCEC WXS blood_normal CPT0020790002 CPT0020790002.Whol C3N-00383.WXS.N.hg38 C3N-00383 UCEC WXS blood_normal CPT0020790002 37e6dbaf-8495-467a-97d2-931a4061ec47_gdc_realn.bam 43876318693 BAM NA c56e7f63-aeaf-4c1e-8f3c-f17d6308709f 58ea02662eb66dd7bbc9d6dfa4dc4ec8 hg38 Blood Derived Normal C3N-00383-71 C3N-00383.WXS.T C3N-00383 UCEC WXS tumor CPT0022830006 CPT0022830006.WholeExome.RP-1303.bam 29721573813 BAM NA 5c4a506f-3e9f-48bc-9013-89232633f467 3aeb99350ebaed98bfdc6592a23c33d8 hg19 Primary Tumor C3N-00383-04 C3N-00383.WXS.T.hg38 C3N-00383 UCEC WXS tumor CPT0022830006 6e9f2a37-b53b-4017-ae76-ac141191ea9c_gdc_realn.bam 40724584612 BAM NA f47e869d-e5af-4f78-a38e-af3bec29cabd 62d436405a7337d3cbd154d75d61220e hg38 Primary Tumor C3N-00383-04 -C3N-00384.MethArray.Green.T C3N-00384 CM Methylation Array tumor CPT0022390009 202163550072_R06C01_Grn.idat 13676236 IDAT Green 680bd99c-fe01-4af7-9244-28f80dab8893 9308e4b7e01153e6be9821168244571a NA Primary Tumor C3N-00384-02 -C3N-00384.MethArray.Red.T C3N-00384 CM Methylation Array tumor CPT0022390009 202163550072_R06C01_Red.idat 13676236 IDAT Red 09a0c8ab-4a4d-41d0-bc38-a1fa75499ffe 7405da39e15289d5488c7d538e1d484c NA Primary Tumor C3N-00384-02 -C3N-00384.miRNA-Seq.A C3N-00384 CM miRNA-Seq tissue_normal CPT0022410005 181119_UNC31-K00269_0165_AH27WCBBXY_TCGGCA_S24_L001_R1_001.unaln.bam 162859518 BAM NA a0e98f39-158b-4b05-8ee6-d0b88527b2d5 e1be8acdd9f62b0de586344341e3d158 NA Solid Tissue Normal C3N-00384-06 -C3N-00384.miRNA-Seq.A.hg38 C3N-00384 CM miRNA-Seq tissue_normal CPT0022410005 745103a1-e939-4652-93b4-b27be15a9ca6_mirnaseq_gdc_realn.bam 183259475 BAM NA 00469fb7-73a6-4c1b-ac8d-bad3d22f5abe f0940076f1cb6ec6791fca4c868b5165 hg38 Solid Tissue Normal C3N-00384-06 -C3N-00384.miRNA-Seq.T C3N-00384 CM miRNA-Seq tumor CPT0022390012 181113_UNC31-K00269_0164_AH23NNBBXY_GTTTCG_S45_L004_R1_001.unaln.bam 163177530 BAM NA e2c98261-8957-4a0d-a20a-931bfdec8118 6067189061107224fe8e622775098531 NA Primary Tumor C3N-00384-02 -C3N-00384.miRNA-Seq.T.hg38 C3N-00384 CM miRNA-Seq tumor CPT0022390012 8fafae95-7f52-49c2-a667-06755375e4bf_mirnaseq_gdc_realn.bam 168336328 BAM NA f66fc7f0-e495-41e0-a04e-5ab1e5962986 c3cc9d1d02a5f82cb3510bd4d0399cfe hg38 Primary Tumor C3N-00384-02 -C3N-00384.RNA-Seq.chimeric.A.hg38 C3N-00384 CM RNA-Seq tissue_normal CPT0022410005 aef8b640-749f-4bd6-b013-5a084e751de5.rna_seq.chimeric.gdc_realn.bam 45339362 BAM chimeric 5b2e589c-66f2-474e-bab9-d28d25e92676 a333c9bedc2bb6244778a2764d91677e hg38 Solid Tissue Normal C3N-00384-06 -C3N-00384.RNA-Seq.chimeric.T.hg38 C3N-00384 CM RNA-Seq tumor CPT0022390012 e4543772-f48f-4f79-aa84-763f2988da67.rna_seq.chimeric.gdc_realn.bam 44303375 BAM chimeric d5a05ef6-277a-40ec-b340-3d8c8d58d00f b7cdd3c37a39cd060483bedf4c2864b5 hg38 Primary Tumor C3N-00384-02 -C3N-00384.RNA-Seq.genomic.A.hg38 C3N-00384 CM RNA-Seq tissue_normal CPT0022410005 aef8b640-749f-4bd6-b013-5a084e751de5.rna_seq.genomic.gdc_realn.bam 8255316232 BAM genomic 98dd728d-6566-4b51-aecf-8ce9684aed1d 24a996723efcda32822608cd412a69ce hg38 Solid Tissue Normal C3N-00384-06 -C3N-00384.RNA-Seq.genomic.T.hg38 C3N-00384 CM RNA-Seq tumor CPT0022390012 e4543772-f48f-4f79-aa84-763f2988da67.rna_seq.genomic.gdc_realn.bam 10483884602 BAM genomic f788ba55-f605-4fb4-9ea4-ca0cef2992c9 4a6818cdfea5a07768d15192f55c84e1 hg38 Primary Tumor C3N-00384-02 -C3N-00384.RNA-Seq.R1.A C3N-00384 CM RNA-Seq tissue_normal CPT0022410005 180516_UNC32-K00270_0095_AHTY5LBBXX_ATTCCT_S7_L008_R1_001.fastq.gz 3844066253 FASTQ NA 72d7adcf-9a3f-4996-b438-67c4d27ec1bd 2a868d23894ff198919046f56dc95c1d NA Solid Tissue Normal C3N-00384-06 -C3N-00384.RNA-Seq.R1.T C3N-00384 CM RNA-Seq tumor CPT0022390012 170823_UNC31-K00269_0075_AHLCW5BBXX_TAGCTT_S7_L007_R1_001.fastq.gz 4137180038 FASTQ NA 69fb3a72-5e56-48c9-af16-29674c8932a0 0ed219a7cb6bdbeececbe0f34d585a0d NA Primary Tumor C3N-00384-02 -C3N-00384.RNA-Seq.R2.A C3N-00384 CM RNA-Seq tissue_normal CPT0022410005 180516_UNC32-K00270_0095_AHTY5LBBXX_ATTCCT_S7_L008_R2_001.fastq.gz 4229067633 FASTQ NA 301e2007-d907-4eaf-a17f-39ed110ea0f7 60cccb58f751ffb6be6eb2928a083e3b NA Solid Tissue Normal C3N-00384-06 -C3N-00384.RNA-Seq.R2.T C3N-00384 CM RNA-Seq tumor CPT0022390012 170823_UNC31-K00269_0075_AHLCW5BBXX_TAGCTT_S7_L007_R2_001.fastq.gz 4470455098 FASTQ NA f3f13bbf-fddf-4c74-999a-35d0cb629db4 2ab44e960f59c258bbf794e8f864e4b6 NA Primary Tumor C3N-00384-02 -C3N-00384.RNA-Seq.transcriptome.A.hg38 C3N-00384 CM RNA-Seq tissue_normal CPT0022410005 aef8b640-749f-4bd6-b013-5a084e751de5.rna_seq.transcriptome.gdc_realn.bam 9845494185 BAM transcriptome 09b9d229-a357-4bc8-a45b-1bfd1b24ce91 dc40e21d3db06b042ef16d992910cccd hg38 Solid Tissue Normal C3N-00384-06 -C3N-00384.RNA-Seq.transcriptome.T.hg38 C3N-00384 CM RNA-Seq tumor CPT0022390012 e4543772-f48f-4f79-aa84-763f2988da67.rna_seq.transcriptome.gdc_realn.bam 9496608309 BAM transcriptome 1d0a1fc8-bcfb-4f72-82b4-0f7044f43659 88e0f89496e792951fec98b5587c57bd hg38 Primary Tumor C3N-00384-02 -C3N-00384.WGS.A C3N-00384 CM WGS tissue_normal CPT0022410008 CPT0022410008.WholeGenome.RP-1303.bam 58699716186 BAM NA ca66ec34-98f7-4a0c-9fc9-433ac33b7572 f4de3bfa4f1e92e6c39be995bff4619f hg19 Solid Tissue Normal C3N-00384-06 -C3N-00384.WGS.A.hg38 C3N-00384 CM WGS tissue_normal CPT0022410008 4484bfa4-856a-412f-a45f-27c66d2342d2_wgs_gdc_realn.bam 84555828087 BAM NA 63d46a60-3424-4946-93b6-a197adddbecc 5e5694a2264ab4ce1067e2c906694788 hg38 Solid Tissue Normal C3N-00384-06 -C3N-00384.WGS.N C3N-00384 CM WGS blood_normal CPT0022420002 CPT0022420002.WholeGenome.RP-1303.bam 70838023693 BAM NA e196969c-6949-41c9-91e3-1c61e3fceadd 369c81db408f604d472bd180b85ccad9 hg19 Blood Derived Normal C3N-00384-71 -C3N-00384.WGS.N.hg38 C3N-00384 CM WGS blood_normal CPT0022420002 a4ea45cd-2cd8-4cfa-8b38-07b134a74a63_gdc_realn.bam 104106167448 BAM NA 91159565-64ed-4e54-87f7-b67e7cefada9 9bb8972f6aba7f44d495eaee827de7c6 hg38 Blood Derived Normal C3N-00384-71 -C3N-00384.WGS.T C3N-00384 CM WGS tumor CPT0022390009 CPT0022390009.WholeGenome.RP-1303.bam 71372911853 BAM NA 0570e25d-08f2-4f23-8cf7-9177b194df3b e2e9a09757e19cdca986f779b2638f71 hg19 Primary Tumor C3N-00384-02 -C3N-00384.WGS.T.hg38 C3N-00384 CM WGS tumor CPT0022390009 2af47508-4217-480f-87de-dfba4b11dd31_gdc_realn.bam 100311080175 BAM NA 1e4ce435-d719-4ad0-ae5b-3487e901f748 dc744dacda8be4cd12967b34cfe26eb3 hg38 Primary Tumor C3N-00384-02 -C3N-00384.WXS.A C3N-00384 CM WXS tissue_normal CPT0022410008 CPT0022410008.WholeExome.RP-1303.bam 27760113863 BAM NA 9fef275c-5dda-41ed-8487-bbafa422688d dbd4c0e6733a09c1f9300d49f1544ede hg19 Solid Tissue Normal C3N-00384-06 -C3N-00384.WXS.A.hg38 C3N-00384 CM WXS tissue_normal CPT0022410008 4484bfa4-856a-412f-a45f-27c66d2342d2_wxs_gdc_realn.bam 38043829453 BAM NA d4bf5ab1-7939-4b1e-a002-0f7fa4d84527 12b1fd37ca4a419c479653ab3afb7eea hg38 Solid Tissue Normal C3N-00384-06 -C3N-00384.WXS.N C3N-00384 CM WXS blood_normal CPT0022420002 CPT0022420002.WholeExome.RP-1303.bam 32669384993 BAM NA 3be60051-f877-4456-ba7a-c7ce3aa38d67 16016a18dc30b5bdf977f3b53e5f5c00 hg19 Blood Derived Normal C3N-00384-71 -C3N-00384.WXS.N.hg38 C3N-00384 CM WXS blood_normal CPT0022420002 a4ea45cd-2cd8-4cfa-8b38-07b134a74a63_gdc_realn.bam 45005973385 BAM NA 114d18d7-6624-4756-b8f1-3a2559e8ce47 e43ba652f7570e3b78c94aadfe9fc965 hg38 Blood Derived Normal C3N-00384-71 -C3N-00384.WXS.T C3N-00384 CM WXS tumor CPT0022390009 CPT0022390009.WholeExome.RP-1303.bam 29529026982 BAM NA a3223d2c-80b4-498d-83ae-3625533cd223 e1ce0a498f348b50c56b68a7ab294984 hg19 Primary Tumor C3N-00384-02 -C3N-00384.WXS.T.hg38 C3N-00384 CM WXS tumor CPT0022390009 2af47508-4217-480f-87de-dfba4b11dd31_gdc_realn.bam 41317031638 BAM NA f4d07339-1243-49d7-9a1e-6467002021c1 3b6ca39437ccabda14e94e2b05a15888 hg38 Primary Tumor C3N-00384-02 -C3N-00385.MethArray.Green.T C3N-00385 CM Methylation Array tumor CPT0015930006 202234380058_R04C01_Grn.idat 13676231 IDAT Green 72577268-2ff6-4ddf-b9fb-3c1770838378 8675567334d7cf5e19313bb21f13b643 NA Primary Tumor C3N-00385-02 -C3N-00385.MethArray.Red.T C3N-00385 CM Methylation Array tumor CPT0015930006 202234380058_R04C01_Red.idat 13676231 IDAT Red 1d6a5bee-5d48-47a2-933b-3394892b72f6 c2649a373b7d5b0874ba64974746e1e8 NA Primary Tumor C3N-00385-02 -C3N-00385.miRNA-Seq.T C3N-00385 CM miRNA-Seq tumor CPT0015930009 190828_UNC32-K00270_0200_BH7GVJBBXY_CAGGCG_S170_L008_R1_001.unaln.bam 208731355 BAM NA 340598d4-fcde-4099-b7db-07c5db4d45dd b9538114aadad8001c7cb370c918300b NA Primary Tumor C3N-00385-02 -C3N-00385.miRNA-Seq.T.hg38 C3N-00385 CM miRNA-Seq tumor CPT0015930009 a248b5ac-5c01-402f-b3d2-3646278bfbeb_mirnaseq_gdc_realn.bam 222669197 BAM NA 0b6514ed-b52d-4761-aaaa-132d64ae83d5 cb1a3d34952a2b3b27ed3483807c86c6 hg38 Primary Tumor C3N-00385-02 -C3N-00385.RNA-Seq.chimeric.T.hg38 C3N-00385 CM RNA-Seq tumor CPT0015930009 bc33b075-01d4-4254-a9a2-f6a10b275d94.rna_seq.chimeric.gdc_realn.bam 154276436 BAM chimeric fbd2aea0-dcc7-41eb-bcaf-6c6a9ff19674 bb7faf1d28a5f95bb508582ff160d0c8 hg38 Primary Tumor C3N-00385-02 -C3N-00385.RNA-Seq.genomic.T.hg38 C3N-00385 CM RNA-Seq tumor CPT0015930009 bc33b075-01d4-4254-a9a2-f6a10b275d94.rna_seq.genomic.gdc_realn.bam 8982847463 BAM genomic e9795f0c-74c6-455f-b327-42c9ac4a7a49 5d6a7b2273fb1c1ea0021069b032b0cf hg38 Primary Tumor C3N-00385-02 -C3N-00385.RNA-Seq.R1.T C3N-00385 CM RNA-Seq tumor CPT0015930009 171109_UNC31-K00269_0091_BHMFGTBBXX_GGCTAC_S1_L001_R1_001.fastq.gz 3783152303 FASTQ NA 7fd19c62-cc82-4870-b912-d28cea4f7705 9b43bb746fa5544bff9b38ca2a5f4e60 NA Primary Tumor C3N-00385-02 -C3N-00385.RNA-Seq.R2.T C3N-00385 CM RNA-Seq tumor CPT0015930009 171109_UNC31-K00269_0091_BHMFGTBBXX_GGCTAC_S1_L001_R2_001.fastq.gz 4414012529 FASTQ NA 1c156111-ded4-4f5f-8927-04e88822424a f03a8291172c3b0aa6a0860bf533e7c0 NA Primary Tumor C3N-00385-02 -C3N-00385.RNA-Seq.transcriptome.T.hg38 C3N-00385 CM RNA-Seq tumor CPT0015930009 bc33b075-01d4-4254-a9a2-f6a10b275d94.rna_seq.transcriptome.gdc_realn.bam 9903757191 BAM transcriptome 6c82def9-5561-4046-8446-880e5108b2eb 5bdf1e0bbd8fce1d0b9c7db041ffbb42 hg38 Primary Tumor C3N-00385-02 -C3N-00385.WGS.N C3N-00385 CM WGS blood_normal CPT0016120002 CPT0016120002.WholeGenome.RP-1303.bam 54542079715 BAM NA ea5166fe-f2cc-4137-bfcd-ce45b9032d60 598e5ec7c29e0d59ecf6e175208d1e2c hg19 Blood Derived Normal C3N-00385-31,C3N-00385-71 -C3N-00385.WGS.N.hg38 C3N-00385 CM WGS blood_normal CPT0016120002 ece04aa7-937d-499b-808c-edb69141f329_wgs_gdc_realn.bam 80497625188 BAM NA 6764a632-a57d-419e-ade4-901a9d5f82a4 f519e49afd154c51dd10d5a0b7edfd0a hg38 Blood Derived Normal C3N-00385-31,C3N-00385-71 -C3N-00385.WGS.T C3N-00385 CM WGS tumor CPT0015930006 CPT0015930006.WholeGenome.RP-1303.bam 59601782306 BAM NA e15f9467-c1b8-4f04-9c1c-9f42b53b9643 554c1af88a7ca9ca48fa90f7b610695b hg19 Primary Tumor C3N-00385-02 -C3N-00385.WGS.T.hg38 C3N-00385 CM WGS tumor CPT0015930006 f40684d9-53f4-4b52-bfcc-4feb0b6de718_wgs_gdc_realn.bam 85062569733 BAM NA 7962b376-d9cb-4360-a1e2-3242835c1a29 86b804da87373302507a675550b22ef9 hg38 Primary Tumor C3N-00385-02 -C3N-00385.WXS.N C3N-00385 CM WXS blood_normal CPT0016120002 CPT0016120002.WholeExome.RP-1303.bam 27661030793 BAM NA 36253f16-122d-4059-a24e-54838e8f16f8 abeb7c9bb167e6ea808a0b2a3392f33d hg19 Blood Derived Normal C3N-00385-31,C3N-00385-71 -C3N-00385.WXS.N.hg38 C3N-00385 CM WXS blood_normal CPT0016120002 ece04aa7-937d-499b-808c-edb69141f329_wxs_gdc_realn.bam 36614740106 BAM NA 0662ecf0-6609-4614-ab74-616edcd65e10 e7cf7c6c827e84cf06a01840ccfa0998 hg38 Blood Derived Normal C3N-00385-31,C3N-00385-71 -C3N-00385.WXS.T C3N-00385 CM WXS tumor CPT0015930006 CPT0015930006.WholeExome.RP-1303.bam 35136570694 BAM NA 41b5beaa-8a84-46f5-bb01-900c21673031 c4ac7ee8ee9944c517a05cf73dff6301 hg19 Primary Tumor C3N-00385-02 -C3N-00385.WXS.T.hg38 C3N-00385 CM WXS tumor CPT0015930006 f40684d9-53f4-4b52-bfcc-4feb0b6de718_wxs_gdc_realn.bam 47336652079 BAM NA dab767f8-5e30-4e6a-8fed-b4f3c3d129f6 85b5f76e333ed699250a54b0e44acc9d hg38 Primary Tumor C3N-00385-02 C3N-00386.MethArray.Green.T C3N-00386 UCEC Methylation Array tumor CPT0016220009 202184900140_R01C01_Grn.idat 13676262 IDAT Green 59334dfd-7bce-4274-b6a5-6151bf3681f8 b2cb3d6cdc6442e7301fd33f8d664551 NA Primary Tumor C3N-00386-02 C3N-00386.MethArray.Red.T C3N-00386 UCEC Methylation Array tumor CPT0016220009 202184900140_R01C01_Red.idat 13676262 IDAT Red 1059e477-0937-45d2-b23e-601b044750bf 1569e0474c68075d3a7df5dd08f859a3 NA Primary Tumor C3N-00386-02 C3N-00386.miRNA-Seq.T C3N-00386 UCEC miRNA-Seq tumor CPT0016220006 180924_UNC31-K00269_0154_AHWTMLBBXX_CCAACA_S36_L002_R1_001.unaln.bam 218294257 BAM NA 32d3e699-265c-46f2-b0bb-866b12fb19fa ff1028b96b2da0d69a119da4f8f91670 NA Primary Tumor C3N-00386-02 @@ -22418,30 +21818,6 @@ C3N-00390.WXS.T.HET_xnEk99.hg38 C3N-00390 CCRCC WXS tumor CPT0017380012 db1a7dad C3N-00390.WXS.T.HET_xnEmQz C3N-00390 CCRCC WXS tumor CPT0017420012 CPT0017420012.WholeExome.RP-1303.bam 24249113360 BAM NA d6755e36-61c8-4fbc-999b-1135810dd2aa 88f3825c79b5987589a1d61626208757 hg19 Primary Tumor C3N-00390-03 sample_tag=HET_xnEmQz Duplicate item: CCRCC Tumor heterogeneity study aliquot C3N-00390.WXS.T.HET_xnEmQz.hg38 C3N-00390 CCRCC WXS tumor CPT0017420012 203e9212-0fc2-45f8-8238-7ba61452caae_wxs_gdc_realn.bam 34490604783 BAM NA 79d0202e-f476-4bfc-aedd-309aa0316ccd 7ef4c39d14eba022f5409e557cda0499 hg38 Primary Tumor C3N-00390-03 sample_tag=HET_xnEmQz Duplicate item: CCRCC Tumor heterogeneity study aliquot C3N-00390.WXS.T.hg38 C3N-00390 CCRCC WXS tumor CPT0017410009 123b51a7-1551-4ff7-99d0-6feb628c4355_gdc_realn.bam 33875116875 BAM NA 8fb76fd8-4ac2-445a-bf61-627855d3a69c c62623a4244e100151e27920575275fa hg38 Primary Tumor C3N-00390-02 -C3N-00432.MethArray.Green.T C3N-00432 CM Methylation Array tumor CPT0022090009 202163550115_R06C01_Grn.idat 13676232 IDAT Green 53e9b37c-de57-4b8a-8f1d-fe7ff8b43fa5 0d76b7bd8f16050810cb4bda5bd88b20 NA Primary Tumor C3N-00432-02 -C3N-00432.MethArray.Red.T C3N-00432 CM Methylation Array tumor CPT0022090009 202163550115_R06C01_Red.idat 13676232 IDAT Red b8a35b44-496f-435f-a996-7dd771881c0f 80c105e9b34547eafc822f8b1e86add4 NA Primary Tumor C3N-00432-02 -C3N-00432.miRNA-Seq.T C3N-00432 CM miRNA-Seq tumor CPT0022090006 181119_UNC31-K00269_0165_AH27WCBBXY_AGTTCC_S38_L005_R1_001.unaln.bam 205423085 BAM NA b91475c5-bd43-4764-abbd-977b2288b701 93f709772dfb17bce2b157edaf6ae24c NA Primary Tumor C3N-00432-02 -C3N-00432.miRNA-Seq.T.hg38 C3N-00432 CM miRNA-Seq tumor CPT0022090006 180e74e7-7ba0-4001-83cd-60be72e6f44e_mirnaseq_gdc_realn.bam 222999765 BAM NA ca55bc22-50e3-4800-b279-04c014ac6220 134467b9f791f198c5ecd3f94d1878ca hg38 Primary Tumor C3N-00432-02 -C3N-00432.RNA-Seq.chimeric.A.hg38 C3N-00432 CM RNA-Seq tissue_normal CPT0022110010 e6be39e8-5247-4d20-826b-9272d921d0cb.rna_seq.chimeric.gdc_realn.bam 28110046 BAM chimeric 767c51a5-9fbf-40e3-9d4c-4592e2e64a37 81ae8080ea6409f694d1db21fa36d867 hg38 Solid Tissue Normal C3N-00432-06 -C3N-00432.RNA-Seq.chimeric.T.hg38 C3N-00432 CM RNA-Seq tumor CPT0022090006 a2e34143-f50b-47a8-bcb0-10944f4897eb.rna_seq.chimeric.gdc_realn.bam 144004224 BAM chimeric a2343061-56c1-4f56-90ba-be743fed0cdf cd87a4050dc812be6d5f6eb70043a160 hg38 Primary Tumor C3N-00432-02 -C3N-00432.RNA-Seq.genomic.A.hg38 C3N-00432 CM RNA-Seq tissue_normal CPT0022110010 e6be39e8-5247-4d20-826b-9272d921d0cb.rna_seq.genomic.gdc_realn.bam 7816657763 BAM genomic 7e6ea41c-73de-4ac6-b31a-06a1e1413b13 96c4146cc3a6fca37b9ee27e2aac595a hg38 Solid Tissue Normal C3N-00432-06 -C3N-00432.RNA-Seq.genomic.T.hg38 C3N-00432 CM RNA-Seq tumor CPT0022090006 a2e34143-f50b-47a8-bcb0-10944f4897eb.rna_seq.genomic.gdc_realn.bam 9602895812 BAM genomic ca96d242-0dc7-42d6-b519-fb1566aa1b18 7cf33b4f26496eb1e643b6de96324498 hg38 Primary Tumor C3N-00432-02 -C3N-00432.RNA-Seq.R1.A C3N-00432 CM RNA-Seq tissue_normal CPT0022110010 180606_UNC32-K00270_0097_AHVCKFBBXX_CAGATC_S30_L008_R1_001.fastq.gz 3466810463 FASTQ NA 49745b4a-48e6-4a4a-9918-90567b375b39 285144a499af25ba59ba4de1e222f4a3 NA Solid Tissue Normal C3N-00432-06 -C3N-00432.RNA-Seq.R1.T C3N-00432 CM RNA-Seq tumor CPT0022090006 170818_UNC32-K00270_0051_BHLCCHBBXX_CTTGTA_S5_L002_R1_001.fastq.gz 4241772520 FASTQ NA 9b6733fb-3b34-4cd3-8861-9fe8acf74ad2 42793d45c66a7931be87e79099a5a8b0 NA Primary Tumor C3N-00432-02 -C3N-00432.RNA-Seq.R2.A C3N-00432 CM RNA-Seq tissue_normal CPT0022110010 180606_UNC32-K00270_0097_AHVCKFBBXX_CAGATC_S30_L008_R2_001.fastq.gz 3713175100 FASTQ NA d865d1d6-435d-4e76-88f4-bef6f43669fa b2edabd07f4510526f6ee6b7f936c68f NA Solid Tissue Normal C3N-00432-06 -C3N-00432.RNA-Seq.R2.T C3N-00432 CM RNA-Seq tumor CPT0022090006 170818_UNC32-K00270_0051_BHLCCHBBXX_CTTGTA_S5_L002_R2_001.fastq.gz 4603356234 FASTQ NA f4914f2e-cc3e-44a3-ac2e-1c15a942f40c 78f563a5ff7cb55531fbfcfb48ec23fb NA Primary Tumor C3N-00432-02 -C3N-00432.RNA-Seq.transcriptome.A.hg38 C3N-00432 CM RNA-Seq tissue_normal CPT0022110010 e6be39e8-5247-4d20-826b-9272d921d0cb.rna_seq.transcriptome.gdc_realn.bam 8603085841 BAM transcriptome 27d57937-0b6c-4a75-a399-83ad9acadcc2 4603b1587a999c8572995ac571c81dc4 hg38 Solid Tissue Normal C3N-00432-06 -C3N-00432.RNA-Seq.transcriptome.T.hg38 C3N-00432 CM RNA-Seq tumor CPT0022090006 a2e34143-f50b-47a8-bcb0-10944f4897eb.rna_seq.transcriptome.gdc_realn.bam 11162599498 BAM transcriptome 626c5015-7c9d-45d4-9c5f-aacd9edee590 1492ecb947ad07510f68910223ebb260 hg38 Primary Tumor C3N-00432-02 -C3N-00432.WGS.N C3N-00432 CM WGS blood_normal CPT0022120002 CPT0022120002.WholeGenome.RP-1303.bam 78561073430 BAM NA 91dc6e51-12b2-42b6-bad7-ec0b26817206 41fd88bf7d28050a1a837ca849ca364e hg19 Blood Derived Normal C3N-00432-71 -C3N-00432.WGS.N.hg38 C3N-00432 CM WGS blood_normal CPT0022120002 735cc0c8-63e1-44cb-b67c-581b7d150098_gdc_realn.bam 117706945884 BAM NA bca5f3f9-88b8-4a6e-928f-0e126a02fc20 7aa5b74d80d4173520fd224caa8784ae hg38 Blood Derived Normal C3N-00432-71 -C3N-00432.WGS.T C3N-00432 CM WGS tumor CPT0022090009 CPT0022090009.WholeGenome.RP-1303.bam 63926646299 BAM NA e7d17861-dde8-41de-8a18-c0a277a2bf9d b688d2ca559cc3dcb232a2faa438cdff hg19 Primary Tumor C3N-00432-02 -C3N-00432.WGS.T.hg38 C3N-00432 CM WGS tumor CPT0022090009 af990bd9-32e6-4027-acbf-22f7b55c7d7d_gdc_realn.bam 94967710414 BAM NA 710c890c-9c43-4c63-9707-6b5b0aee7ee0 7176b789363048186b27d30e11f66da5 hg38 Primary Tumor C3N-00432-02 -C3N-00432.WXS.A C3N-00432 CM WXS tissue_normal CPT0022110008 CPT0022110008.WholeExome.RP-1303.bam 35528013800 BAM NA 1dc002bf-afeb-4962-b191-5507ae8e15b1 6bdc6a20680e4810f7059db8b00ce49d hg19 Solid Tissue Normal C3N-00432-06 -C3N-00432.WXS.A.hg38 C3N-00432 CM WXS tissue_normal CPT0022110008 99cc3e95-92d9-42b6-bb09-2282d8807f2b_wxs_gdc_realn.bam 47206620973 BAM NA 2de5bec7-0202-4dbe-b4e5-b5af9e37e2d9 0f75c6e5067b847620b5b5ccba4fbb2c hg38 Solid Tissue Normal C3N-00432-06 -C3N-00432.WXS.N C3N-00432 CM WXS blood_normal CPT0022120002 CPT0022120002.WholeExome.RP-1303.bam 24196011706 BAM NA f27651b1-48d1-4429-8887-73b44d7262e6 a6049eb24097a15f1910eb639471cf1a hg19 Blood Derived Normal C3N-00432-71 -C3N-00432.WXS.N.hg38 C3N-00432 CM WXS blood_normal CPT0022120002 735cc0c8-63e1-44cb-b67c-581b7d150098_gdc_realn.bam 33042713605 BAM NA 4aa31eae-f3ad-45a4-b7c7-ab05dfd196ee 3c5b1a3a197cfcec3ce5c5b458ee7f82 hg38 Blood Derived Normal C3N-00432-71 -C3N-00432.WXS.T C3N-00432 CM WXS tumor CPT0022090009 CPT0022090009.WholeExome.RP-1303.bam 28315945828 BAM NA 1440f7d2-f7f9-4791-aa91-4adb55a2abf6 1e1c0da88acf40f785b704716c9372da hg19 Primary Tumor C3N-00432-02 -C3N-00432.WXS.T.hg38 C3N-00432 CM WXS tumor CPT0022090009 af990bd9-32e6-4027-acbf-22f7b55c7d7d_gdc_realn.bam 38812438143 BAM NA 420db2ee-1289-4967-983e-afa01d3805d3 c979af4195d6560539a51fb8228c8a88 hg38 Primary Tumor C3N-00432-02 C3N-00433.MethArray.Green.T C3N-00433 LUAD Methylation Array tumor CPT0021450009 202163550076_R06C01_Grn.idat 13676226 IDAT Green 63357ead-633d-4c8f-adec-934492db5b8d 01178c1b93f2a285403050c1d90cf049 NA Primary Tumor C3N-00433-03 C3N-00433.MethArray.Red.T C3N-00433 LUAD Methylation Array tumor CPT0021450009 202163550076_R06C01_Red.idat 13676226 IDAT Red 73548d4c-54e9-4208-ae5d-ea4b9d48f2f3 978fd4614e0de1f97896de842023ecc5 NA Primary Tumor C3N-00433-03 C3N-00433.miRNA-Seq.A C3N-00433 LUAD miRNA-Seq tissue_normal CPT0021490006 181108_UNC31-K00269_0162_AH255GBBXY_TAGCTT_S34_L008_R1_001.unaln.bam 302311879 BAM NA 828bf798-47a5-4176-b0fb-8c71365c9724 8ad6dcd2d5f97311540083bb7064f19e NA Solid Tissue Normal C3N-00433-07 @@ -22470,34 +21846,6 @@ C3N-00433.WXS.N C3N-00433 LUAD WXS blood_normal CPT0021500002 CPT0021500002.Whol C3N-00433.WXS.N.hg38 C3N-00433 LUAD WXS blood_normal CPT0021500002 d2550193-d082-44fe-a0ec-9ce59f8a06cb_gdc_realn.bam 35614744578 BAM NA 13281c32-408b-4ec9-8c38-9f251e0efa4c 53a874533afb6fa95e31c3cdfa784366 hg38 Blood Derived Normal C3N-00433-71 C3N-00433.WXS.T C3N-00433 LUAD WXS tumor CPT0021450009 CPT0021450009.WholeExome.RP-1303.bam 41291662505 BAM NA 476db2f2-c495-4590-9f2c-0d1893dcf891 3d95e4e67296c1e0d0eabad07c2a27d4 hg19 Primary Tumor C3N-00433-03 C3N-00433.WXS.T.hg38 C3N-00433 LUAD WXS tumor CPT0021450009 2b589dfa-a7ce-4957-ad42-ca2e3d3d9d69_gdc_realn.bam 56371621618 BAM NA 871aa1bb-9e81-4bc8-b766-233e958149ba 6bd4e7079fda747d030530ed1765f83c hg38 Primary Tumor C3N-00433-03 -C3N-00434.MethArray.Green.T C3N-00434 CM Methylation Array tumor CPT0022650006 202234360009_R02C01_Grn.idat 13676226 IDAT Green ed29fad4-9ca5-4593-aa49-1ce9d56bfcf8 b60e1f360f44472628f2387812bfeafd NA Primary Tumor C3N-00434-01 -C3N-00434.MethArray.Red.T C3N-00434 CM Methylation Array tumor CPT0022650006 202234360009_R02C01_Red.idat 13676226 IDAT Red ec06a7f9-a8d0-497d-8ad3-89a28917eee6 86e83a4be0a8398e77a179e83b240ad4 NA Primary Tumor C3N-00434-01 -C3N-00434.miRNA-Seq.A C3N-00434 CM miRNA-Seq tissue_normal CPT0022680005 181119_UNC31-K00269_0165_AH27WCBBXY_TCCCGA_S22_L001_R1_001.unaln.bam 214102637 BAM NA c4c476cf-8f64-494c-b4e9-a2bc4c1a631a 4f18c26c025c7769ce5b5c592140491c NA Solid Tissue Normal C3N-00434-06 -C3N-00434.miRNA-Seq.A.hg38 C3N-00434 CM miRNA-Seq tissue_normal CPT0022680005 c2852065-644a-4283-b1da-576f42b14101_mirnaseq_gdc_realn.bam 238277485 BAM NA 5a687e78-07f8-4401-9e54-49f8796f2ffc 1293c247dfb0801963c886ac0642eb20 hg38 Solid Tissue Normal C3N-00434-06 -C3N-00434.miRNA-Seq.T C3N-00434 CM miRNA-Seq tumor CPT0022650009 181119_UNC31-K00269_0165_AH27WCBBXY_CATGGC_S10_L004_R1_001.unaln.bam 164299283 BAM NA 2d223875-7296-4e35-9146-8ee78b24a938 43f9100c7540a881a824e24fca482333 NA Primary Tumor C3N-00434-01 -C3N-00434.miRNA-Seq.T.hg38 C3N-00434 CM miRNA-Seq tumor CPT0022650009 7edd7fc7-990a-4bc4-aaca-9af5abfeb380_mirnaseq_gdc_realn.bam 175726852 BAM NA be2a4b06-c518-439a-8594-9ccc6ecea551 84b5232f03c48b7657525a7ed805d4b7 hg38 Primary Tumor C3N-00434-01 -C3N-00434.RNA-Seq.chimeric.A.hg38 C3N-00434 CM RNA-Seq tissue_normal CPT0022680005 e5a1f2f6-5f15-48d5-8cea-3013ad19a875.rna_seq.chimeric.gdc_realn.bam 25888801 BAM chimeric 3e29e9a1-17dc-4b44-864f-5997b93f5b56 791c07d391d20951de0d3cc9fc9dc74e hg38 Solid Tissue Normal C3N-00434-06 -C3N-00434.RNA-Seq.chimeric.T.hg38 C3N-00434 CM RNA-Seq tumor CPT0022650009 e7d0e1be-57f8-496a-a41d-654b51f5e775.rna_seq.chimeric.gdc_realn.bam 96068126 BAM chimeric 6be86b78-3d18-447b-a532-2a9fb644be60 eb58ea9fd399e59d3a283479ee56ca74 hg38 Primary Tumor C3N-00434-01 -C3N-00434.RNA-Seq.genomic.A.hg38 C3N-00434 CM RNA-Seq tissue_normal CPT0022680005 e5a1f2f6-5f15-48d5-8cea-3013ad19a875.rna_seq.genomic.gdc_realn.bam 9342064396 BAM genomic 98f954bf-9d71-4dcf-844b-7d91482fad34 7aa20c552d6dc8f360aa164119acbf9f hg38 Solid Tissue Normal C3N-00434-06 -C3N-00434.RNA-Seq.genomic.T.hg38 C3N-00434 CM RNA-Seq tumor CPT0022650009 e7d0e1be-57f8-496a-a41d-654b51f5e775.rna_seq.genomic.gdc_realn.bam 8730304269 BAM genomic a2b88e9c-f0ec-41cf-a0cb-cb1a803299f5 ea7b42f00e6d4192edafd7cbab304236 hg38 Primary Tumor C3N-00434-01 -C3N-00434.RNA-Seq.R1.A C3N-00434 CM RNA-Seq tissue_normal CPT0022680005 180516_UNC32-K00270_0095_AHTY5LBBXX_GAGTGG_S6_L008_R1_001.fastq.gz 4037954949 FASTQ NA 82b7aeb4-24c3-4470-bd38-892fd296a6d0 15083e2d36a2f1429631032f5cddcfd6 NA Solid Tissue Normal C3N-00434-06 -C3N-00434.RNA-Seq.R1.T C3N-00434 CM RNA-Seq tumor CPT0022650009 171109_UNC31-K00269_0091_BHMFGTBBXX_CTTGTA_S4_L001_R1_001.fastq.gz 3651383130 FASTQ NA 603adcc1-47b4-4629-bee9-f39f0505a802 5fe8923f08c9a71e1aaebf6e68493fdc NA Primary Tumor C3N-00434-01 -C3N-00434.RNA-Seq.R2.A C3N-00434 CM RNA-Seq tissue_normal CPT0022680005 180516_UNC32-K00270_0095_AHTY5LBBXX_GAGTGG_S6_L008_R2_001.fastq.gz 4410909626 FASTQ NA 80dd12b0-90a4-4a73-b5ed-2c4a537507d4 9177127dfea5c0cadf1b28f19bb9ae6d NA Solid Tissue Normal C3N-00434-06 -C3N-00434.RNA-Seq.R2.T C3N-00434 CM RNA-Seq tumor CPT0022650009 171109_UNC31-K00269_0091_BHMFGTBBXX_CTTGTA_S4_L001_R2_001.fastq.gz 4144670574 FASTQ NA 88e30639-da85-4172-b27b-a8379f239da2 b833d233edb0d69060d087968339fd40 NA Primary Tumor C3N-00434-01 -C3N-00434.RNA-Seq.transcriptome.A.hg38 C3N-00434 CM RNA-Seq tissue_normal CPT0022680005 e5a1f2f6-5f15-48d5-8cea-3013ad19a875.rna_seq.transcriptome.gdc_realn.bam 11570772444 BAM transcriptome fd129e44-2678-43ec-97fe-5beeb81cf1f6 9998a2a6f4ee7e21065ddd045ebd3f75 hg38 Solid Tissue Normal C3N-00434-06 -C3N-00434.RNA-Seq.transcriptome.T.hg38 C3N-00434 CM RNA-Seq tumor CPT0022650009 e7d0e1be-57f8-496a-a41d-654b51f5e775.rna_seq.transcriptome.gdc_realn.bam 10716524734 BAM transcriptome 7cb6a836-c77a-4bac-a81c-0bb714ffd714 821288e2c7c447a825b5631da7043579 hg38 Primary Tumor C3N-00434-01 -C3N-00434.WGS.A C3N-00434 CM WGS tissue_normal CPT0022680008 CPT0022680008.WholeGenome.RP-1303.bam 53469993145 BAM NA c0490845-d37c-43da-a827-38b759771dba aca046b72be3b7e96a52763e5c0bd01e hg19 Solid Tissue Normal C3N-00434-06 -C3N-00434.WGS.A.hg38 C3N-00434 CM WGS tissue_normal CPT0022680008 d6c739a5-cc02-40b2-a920-68ce5c3491b6_wgs_gdc_realn.bam 78861659042 BAM NA b7079df7-8463-428d-b41c-811441cbf3c7 7995d4929e62639d887aaa96f2984b51 hg38 Solid Tissue Normal C3N-00434-06 -C3N-00434.WGS.N C3N-00434 CM WGS blood_normal CPT0020980002 CPT0020980002.WholeGenome.RP-1303.bam 52886271614 BAM NA 33e5f57c-5d39-48d9-8460-458fa2a414f3 4791c08240de9fff506a1e84112e3bd1 hg19 Blood Derived Normal C3N-00434-31,C3N-00434-71 -C3N-00434.WGS.N.hg38 C3N-00434 CM WGS blood_normal CPT0020980002 4aafcda2-a64c-4a48-a65d-08d19e44155e_wgs_gdc_realn.bam 77455938794 BAM NA 513859f1-05d5-467f-b4f0-88ad26a307c1 4ff24ab875ac2f51725e1efd64e334b3 hg38 Blood Derived Normal C3N-00434-31,C3N-00434-71 -C3N-00434.WGS.T C3N-00434 CM WGS tumor CPT0022650006 CPT0022650006.WholeGenome.RP-1303.bam 65772084736 BAM NA 79536660-651f-490f-96ce-ea2e62a67138 86d6aee020649b340391e5439db3aa0f hg19 Primary Tumor C3N-00434-01 -C3N-00434.WGS.T.hg38 C3N-00434 CM WGS tumor CPT0022650006 0e125f5e-ce90-424a-8f78-02f0581ef7a8_wgs_gdc_realn.bam 96200587147 BAM NA d7bbcd04-528a-475f-bdf9-c0b2474804ba 9e30195af8fd9643393d8143f29312f8 hg38 Primary Tumor C3N-00434-01 -C3N-00434.WXS.A C3N-00434 CM WXS tissue_normal CPT0022680008 CPT0022680008.WholeExome.RP-1303.bam 35207133566 BAM NA 4d561c49-ca43-485f-9c31-2fccdabf6237 caff741cfde670fbd6f7b012d54ab43b hg19 Solid Tissue Normal C3N-00434-06 -C3N-00434.WXS.A.hg38 C3N-00434 CM WXS tissue_normal CPT0022680008 d6c739a5-cc02-40b2-a920-68ce5c3491b6_wxs_gdc_realn.bam 46940299553 BAM NA bdb4bc34-efcd-494f-a4bf-4533aec2def6 94423902717f509c70eb917ab29a558c hg38 Solid Tissue Normal C3N-00434-06 -C3N-00434.WXS.N C3N-00434 CM WXS blood_normal CPT0020980002 CPT0020980002.WholeExome.RP-1303.bam 28355284111 BAM NA 943bdb4e-c6b3-43d5-ba00-d99946c71c6f 92f1f231d43d66ec634909338bc1d29c hg19 Blood Derived Normal C3N-00434-31,C3N-00434-71 -C3N-00434.WXS.N.hg38 C3N-00434 CM WXS blood_normal CPT0020980002 4aafcda2-a64c-4a48-a65d-08d19e44155e_wxs_gdc_realn.bam 38036318496 BAM NA c4de697b-ca8b-4c4a-a7e3-dc446a96e63b 17c0ca98c7747e72b08bc544d15ba930 hg38 Blood Derived Normal C3N-00434-31,C3N-00434-71 -C3N-00434.WXS.T C3N-00434 CM WXS tumor CPT0022650006 CPT0022650006.WholeExome.RP-1303.bam 35780843121 BAM NA c21c89ee-4fd3-442f-865e-2f7ec37b8286 c61932cb72108b0e4cb1272ef540b4a8 hg19 Primary Tumor C3N-00434-01 -C3N-00434.WXS.T.hg38 C3N-00434 CM WXS tumor CPT0022650006 0e125f5e-ce90-424a-8f78-02f0581ef7a8_wxs_gdc_realn.bam 48619454818 BAM NA fc6731dd-d456-4906-acb6-397159140378 fb4f872cf1e6966dff542b654d5d26c3 hg38 Primary Tumor C3N-00434-01 C3N-00435.MethArray.Green.A C3N-00435 CCRCC Methylation Array tissue_normal CPT0018250009 204930640051_R06C01_Grn.idat 13677885 IDAT Green 2b922a59-f1f2-487a-bf86-385f274991cf 5f9a39b1a164ad67a87e09e124b0f338 NA Solid Tissue Normal C3N-00435-06 C3N-00435.MethArray.Green.T C3N-00435 CCRCC Methylation Array tumor CPT0017850009 202176300039_R02C01_Grn.idat 13676226 IDAT Green 895d58a0-02f5-4a76-902b-5a1fa3f20929 0d0c769bd0756b2fabaf9c215cae89c2 NA Primary Tumor C3N-00435-05 C3N-00435.MethArray.Red.A C3N-00435 CCRCC Methylation Array tissue_normal CPT0018250009 204930640051_R06C01_Red.idat 13677885 IDAT Red 2545d5f3-8f8d-4580-a87e-2d689621b006 5057272b9c9eeba8c59b819c0a952b89 NA Solid Tissue Normal C3N-00435-06 @@ -22637,6 +21985,8 @@ C3N-00439.RNA-Seq.genomic.T.hg38 C3N-00439 CCRCC RNA-Seq tumor CPT0379480007 880 C3N-00439.RNA-Seq.R1.T C3N-00439 CCRCC RNA-Seq tumor CPT0379480007 210105_UNC32-K00270_0268_AHK7HMBBXY_AGGCAGAG-AGAATGCC_S10_L004_R1_001.fastq.gz 3476102077 FASTQ NA d8da199c-0cc2-4309-bc89-fe4b9c98fab7 31c355e5c168182488e293475ec7fe99 NA Primary Tumor C3N-00439-02 C3N-00439.RNA-Seq.R2.T C3N-00439 CCRCC RNA-Seq tumor CPT0379480007 210105_UNC32-K00270_0268_AHK7HMBBXY_AGGCAGAG-AGAATGCC_S10_L004_R2_001.fastq.gz 3876391287 FASTQ NA 1b720778-8404-4f33-a358-821f2e4f9777 8c8c00abcf8dcab501829f87df3984d7 NA Primary Tumor C3N-00439-02 C3N-00439.RNA-Seq.transcriptome.T.hg38 C3N-00439 CCRCC RNA-Seq tumor CPT0379480007 88009e00-3658-4f44-86b4-dec5ebb3c034.rna_seq.transcriptome.gdc_realn.bam 6343453525 BAM transcriptome 967d23b0-1261-4331-9f09-6def6ddc4605 d3ee234d421ad25d19565a690a5652c6 hg38 Primary Tumor C3N-00439-02 +C3N-00439.scRNA-Seq.R1.T C3N-00439 CCRCC scRNA-Seq tumor CPT0379480005 20220127_WUSTL_TWFU-CPT0379480005-Y1N1Z1_1Bn1_1_ATAGGGCGAG+TGCATCGAGT_S4_L002_R1_001.fastq.gz 5308570857 FASTQ NA cec6c9e9-5605-440e-b4b0-1eafd0837f2c ef8c94d4196cb6999ef50fb418dbd0d1 NA Primary Tumor C3N-00439-02 +C3N-00439.scRNA-Seq.R2.T C3N-00439 CCRCC scRNA-Seq tumor CPT0379480005 20220127_WUSTL_TWFU-CPT0379480005-Y1N1Z1_1Bn1_1_ATAGGGCGAG+TGCATCGAGT_S4_L002_R2_001.fastq.gz 18328318712 FASTQ NA 99caff09-18db-46e5-a793-a352e1b92e4d 707452d44d87504f8571ee62c07becd2 NA Primary Tumor C3N-00439-02 C3N-00439.WGS.N C3N-00439 CCRCC WGS blood_normal CPT0379570002 CPT0379570002.WholeGenome.RP-2158.bam 28922239242 BAM NA aa566fab-6e2c-436d-b470-eb2d53002255 cfdf45675574c5d997ab5777e1faf8d7 hg19 Blood Derived Normal C3N-00439-31 C3N-00439.WGS.N.hg38 C3N-00439 CCRCC WGS blood_normal CPT0379570002 9895ad60-a9ed-4923-8405-36f7bbfbac98_wgs_gdc_realn.bam 88060239999 BAM NA 159352a4-acac-430d-8389-1491f5fc1dd7 02e2b402a38bce9a5281617365a6c993 hg38 Blood Derived Normal C3N-00439-31 C3N-00439.WGS.T C3N-00439 CCRCC WGS tumor CPT0379480010 CPT0379480010.WholeGenome.RP-2158.bam 32821041446 BAM NA e6af19b8-c939-44c8-b0bb-b1fec6477bfe 4cd63d82c51a304d9e47dadb16b359e1 hg19 Primary Tumor C3N-00439-02 @@ -23048,9 +22398,9 @@ C3N-00517.WXS.T.hg38 C3N-00517 PDA WXS tumor CPT0093860009 55541171-4dc5-41f4-86 C3N-00517.WXS.T.hg38.high_cov C3N-00517 PDA WXS tumor CPT0093860009_1 65258cd6-b5b8-4ea3-98e5-d10ed48965e2_wxs_gdc_realn.bam 94467849061 BAM NA a456ff07-170f-433e-9af3-02fcb188d71f c5b95df266be848d9e5119aa081cc529 hg38 Primary Tumor C3N-00517-01 local_meta=.high_cov C3N-00517.WXS.T.high_cov C3N-00517 PDA WXS tumor CPT0093860009_1 CPT0093860009_1.WholeExome.RP-1303.bam 69874566795 BAM NA 3e9908d0-1273-4f76-a673-29eade5f724d ae5ba9ea636f932506a2aa4e97545a16 hg19 Primary Tumor C3N-00517-01 local_meta=.high_cov C3N-00518.MethArray.Green.A C3N-00518 PDA Methylation Array tissue_normal CPT0078030006 203561620089_R08C01_Grn.idat 13676236 IDAT Green b5319b5a-bf49-49aa-958b-a46a09143b33 c6ea76e0dc029276395d59fb10bec8fe NA Solid Tissue Normal C3N-00518-05 -C3N-00518.MethArray.Green.T.deprecated C3N-00518 PDA Methylation Array tumor CPT0078000006 202184990013_R03C01_Grn.idat 13676226 IDAT Green 3fc70e87-e4b9-4a5e-9c99-40c1b0ce68e0 1719150d77429ed54984c395406481b1 NA Primary Tumor C3N-00518-01 local_meta=.deprecated +C3N-00518.MethArray.Green.T.UNK_o0x46K.deprecated C3N-00518 PDA Methylation Array tumor CPT0078000006 202184990013_R03C01_Grn.idat 13676226 IDAT Green 3fc70e87-e4b9-4a5e-9c99-40c1b0ce68e0 1719150d77429ed54984c395406481b1 NA Primary Tumor C3N-00518-01 sample_tag=UNK_o0x46K local_meta=.deprecated The WGS data for this aliquot failed the GDC harmonization pipeline. C3N-00518.MethArray.Red.A C3N-00518 PDA Methylation Array tissue_normal CPT0078030006 203561620089_R08C01_Red.idat 13676236 IDAT Red e6315c56-e1bc-4b9c-8177-aac92aaa80c7 92f53364f75553cbcfe20f986577fd40 NA Solid Tissue Normal C3N-00518-05 -C3N-00518.MethArray.Red.T.deprecated C3N-00518 PDA Methylation Array tumor CPT0078000006 202184990013_R03C01_Red.idat 13676226 IDAT Red 5433d211-cdba-4bc4-8920-3bf116f96ede c94f3ec10eab78c2c5a8207291d0799c NA Primary Tumor C3N-00518-01 local_meta=.deprecated +C3N-00518.MethArray.Red.T.UNK_o0x46K.deprecated C3N-00518 PDA Methylation Array tumor CPT0078000006 202184990013_R03C01_Red.idat 13676226 IDAT Red 5433d211-cdba-4bc4-8920-3bf116f96ede c94f3ec10eab78c2c5a8207291d0799c NA Primary Tumor C3N-00518-01 sample_tag=UNK_o0x46K local_meta=.deprecated The WGS data for this aliquot failed the GDC harmonization pipeline. C3N-00518.miRNA-Seq.A C3N-00518 PDA miRNA-Seq tissue_normal CPT0078030009 181108_UNC31-K00269_0162_AH255GBBXY_CGGAAT_S13_L001_R1_001.unaln.bam 304258636 BAM NA 4a725658-5042-4215-a1e4-9d1b69817b8f 14b4c0a7a0ce7206d2c67463f11c1e66 NA Solid Tissue Normal C3N-00518-05 C3N-00518.miRNA-Seq.A.hg38 C3N-00518 PDA miRNA-Seq tissue_normal CPT0078030009 5f424fd1-0570-4ee5-bd7a-fdd8530c1fa8_mirnaseq_gdc_realn.bam 335704654 BAM NA 82c3f8f3-4c46-4f43-bf20-0239eb2b724a ba930a4354c47be18aab38a402615c5f hg38 Solid Tissue Normal C3N-00518-05 C3N-00518.miRNA-Seq.T C3N-00518 PDA miRNA-Seq tumor CPT0078000009 181012_UNC32-K00270_0124_AH223CBBXY_GTTTCG_S41_L007_R1_001.unaln.bam 236317692 BAM NA c321e0e3-d990-4f65-93df-f2d31536e571 c3a798a33fb0ae6016a4108dadabe626 NA Primary Tumor C3N-00518-01 @@ -23070,17 +22420,17 @@ C3N-00518.WGS.A.hg38 C3N-00518 PDA WGS tissue_normal CPT0078030006 60b0ba11-f504 C3N-00518.WGS.N C3N-00518 PDA WGS blood_normal CPT0078080002 CPT0078080002.WholeGenome.RP-1303.bam 88738034527 BAM NA 1cbecd11-5d2b-4d65-8141-7a80e87485e9 35939088665dc59d10af48815f08d8c7 hg19 Blood Derived Normal C3N-00518-31 C3N-00518.WGS.N.hg38 C3N-00518 PDA WGS blood_normal CPT0078080002 6216796a-b345-4f2d-9dc7-00b5f8c7421f_gdc_realn.bam 134316325766 BAM NA 552411a0-e179-49e9-a6d4-805dcc60ac50 8a8bc94b3fb2b6c9c18cfe2773dd5843 hg38 Blood Derived Normal C3N-00518-31 C3N-00518.WGS.T C3N-00518 PDA WGS tumor CPT0078000006_1 CPT0078000006_1.WholeGenome.RP-1303.bam 115252537444 BAM NA 2f577b2e-29b4-499b-ae75-5a39ca5c5619 cbd3001a81779b82c7c9c2bf5bb4ed39 hg19 Primary Tumor C3N-00518-01 -C3N-00518.WGS.T.deprecated C3N-00518 PDA WGS tumor CPT0078000006 CPT0078000006.WholeGenome.RP-1303.bam 65340221811 BAM NA 6fdfcdbe-496b-4989-bc70-7b358cce1c77 f6b9eee0f55a7da1185751330cc82ae2 hg19 Primary Tumor C3N-00518-01 local_meta=.deprecated C3N-00518.WGS.T.hg38 C3N-00518 PDA WGS tumor CPT0078000006_1 1e927381-79c9-48a6-9325-ecd0670ec9ae_wgs_gdc_realn.bam 173194972801 BAM NA 270dbe03-6eb7-41ea-b89a-dcaaee2b9b6c 8910fa470ecd959d51a0ef3cb311df8c hg38 Primary Tumor C3N-00518-01 -C3N-00518.WGS.T.hg38.deprecated C3N-00518 PDA WGS tumor CPT0078000006 f867efb9-cfd4-43af-a9b0-67283ae15049_gdc_realn.bam 100374622206 BAM NA bc1311c5-ddc4-4c68-b21d-04d3bc213d6a f1783ee78e05757b167e8d6e18ba45b3 hg38 Primary Tumor C3N-00518-01 local_meta=.deprecated +C3N-00518.WGS.T.UNK_o0x46K.deprecated C3N-00518 PDA WGS tumor CPT0078000006 CPT0078000006.WholeGenome.RP-1303.bam 65340221811 BAM NA 6fdfcdbe-496b-4989-bc70-7b358cce1c77 f6b9eee0f55a7da1185751330cc82ae2 hg19 Primary Tumor C3N-00518-01 sample_tag=UNK_o0x46K local_meta=.deprecated The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00518.WGS.T.UNK_o0x46K.hg38.deprecated C3N-00518 PDA WGS tumor CPT0078000006 f867efb9-cfd4-43af-a9b0-67283ae15049_gdc_realn.bam 100374622206 BAM NA bc1311c5-ddc4-4c68-b21d-04d3bc213d6a f1783ee78e05757b167e8d6e18ba45b3 hg38 Primary Tumor C3N-00518-01 sample_tag=UNK_o0x46K local_meta=.deprecated The WGS data for this aliquot failed the GDC harmonization pipeline. C3N-00518.WXS.A C3N-00518 PDA WXS tissue_normal CPT0078030006 CPT0078030006.WholeExome.RP-1303.bam 29631996940 BAM NA 3a2a6c46-032b-435c-b165-c03da571366f f31969e9b9fc177d8d146554a22d1927 hg19 Solid Tissue Normal C3N-00518-05 C3N-00518.WXS.A.hg38 C3N-00518 PDA WXS tissue_normal CPT0078030006 60b0ba11-f504-4ae3-b94e-244ab396a4db_wxs_gdc_realn.bam 39607136205 BAM NA c57bfc41-cd30-4ec5-ad86-2952dac16982 8a22197a76bfe007fcf1af5fc8960c92 hg38 Solid Tissue Normal C3N-00518-05 C3N-00518.WXS.N C3N-00518 PDA WXS blood_normal CPT0078080002 CPT0078080002.WholeExome.RP-1303.bam 33028195704 BAM NA 1f8dcdcc-6bb9-4286-b5a9-feb3fc1f7dbe 416882ba550148dc1a776dffb6a223de hg19 Blood Derived Normal C3N-00518-31 C3N-00518.WXS.N.hg38 C3N-00518 PDA WXS blood_normal CPT0078080002 6216796a-b345-4f2d-9dc7-00b5f8c7421f_gdc_realn.bam 44485434620 BAM NA 6efb82ce-82d0-4192-93e2-ba51c3fc569f 6c36594e556f0e087a0c5909b27b5945 hg38 Blood Derived Normal C3N-00518-31 -C3N-00518.WXS.T.deprecated C3N-00518 PDA WXS tumor CPT0078000006 CPT0078000006.WholeExome.RP-1303.bam 26085859349 BAM NA 73c90d6c-5923-4748-9130-f8916ed900fe c6a413ceb6f2bc3de0cc1084139bf217 hg19 Primary Tumor C3N-00518-01 local_meta=.deprecated -C3N-00518.WXS.T.hg38.deprecated C3N-00518 PDA WXS tumor CPT0078000006 f867efb9-cfd4-43af-a9b0-67283ae15049_gdc_realn.bam 35951559226 BAM NA 25682ca6-5e20-4f25-a282-bd90c78caeb4 29e9bc6fcd162f20b3735eea12842316 hg38 Primary Tumor C3N-00518-01 local_meta=.deprecated C3N-00518.WXS.T.hg38.high_cov C3N-00518 PDA WXS tumor CPT0078000006_1 1e927381-79c9-48a6-9325-ecd0670ec9ae_wxs_gdc_realn.bam 73940106948 BAM NA c3a9d03c-16b7-4f1e-8fe6-04bd1fa6d2c7 f24204cb8b60e9616135874d1411f26f hg38 Primary Tumor C3N-00518-01 local_meta=.high_cov C3N-00518.WXS.T.high_cov C3N-00518 PDA WXS tumor CPT0078000006_1 CPT0078000006_1.WholeExome.RP-1303.bam 53864250112 BAM NA 1d123fcb-60ae-458a-badc-b3c9f134c5da e99fd47a9c8e9dfc79ae1f271050bc07 hg19 Primary Tumor C3N-00518-01 local_meta=.high_cov +C3N-00518.WXS.T.UNK_o0x46K.deprecated C3N-00518 PDA WXS tumor CPT0078000006 CPT0078000006.WholeExome.RP-1303.bam 26085859349 BAM NA 73c90d6c-5923-4748-9130-f8916ed900fe c6a413ceb6f2bc3de0cc1084139bf217 hg19 Primary Tumor C3N-00518-01 sample_tag=UNK_o0x46K local_meta=.deprecated The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-00518.WXS.T.UNK_o0x46K.hg38.deprecated C3N-00518 PDA WXS tumor CPT0078000006 f867efb9-cfd4-43af-a9b0-67283ae15049_gdc_realn.bam 35951559226 BAM NA 25682ca6-5e20-4f25-a282-bd90c78caeb4 29e9bc6fcd162f20b3735eea12842316 hg38 Primary Tumor C3N-00518-01 sample_tag=UNK_o0x46K local_meta=.deprecated The WGS data for this aliquot failed the GDC harmonization pipeline. C3N-00519.MethArray.Green.T C3N-00519 HNSCC Methylation Array tumor CPT0013430009 202184900140_R07C01_Grn.idat 13676262 IDAT Green a5e6b201-3b4b-44f8-a4e2-5e1aac5a1ee0 e3027921aec03b3006348236f5049ddd NA Primary Tumor C3N-00519-02 C3N-00519.MethArray.Red.T C3N-00519 HNSCC Methylation Array tumor CPT0013430009 202184900140_R07C01_Red.idat 13676262 IDAT Red c3f978f9-8c08-4b0f-82f8-e9323400604d 6e795f28e84a411e12c09cdb289ca79a NA Primary Tumor C3N-00519-02 C3N-00519.miRNA-Seq.A C3N-00519 HNSCC miRNA-Seq tissue_normal CPT0013460006 181113_UNC31-K00269_0164_AH23NNBBXY_CAGATC_S31_L006_R1_001.unaln.bam 244554770 BAM NA 4586ee57-2e75-408b-85d9-8fc2066e2e21 d402bb4f14882671384db3b40da6473f NA Solid Tissue Normal C3N-00519-05 @@ -23771,34 +23121,6 @@ C3N-00580.WXS.N C3N-00580 LUAD WXS blood_normal CPT0069800002 CPT0069800002.Whol C3N-00580.WXS.N.hg38 C3N-00580 LUAD WXS blood_normal CPT0069800002 6e15d0f3-0d77-4d72-aacc-d35c497ec69c_gdc_realn.bam 56038595708 BAM NA 83ec5562-2cf9-4ddd-8c00-45b3a6d470e1 9b8949a2d52f3e3e3edce8dfe29f2cc4 hg38 Blood Derived Normal C3N-00580-71 C3N-00580.WXS.T C3N-00580 LUAD WXS tumor CPT0069700006 CPT0069700006.WholeExome.RP-1303.bam 37097845897 BAM NA d98c9022-538b-46f1-a8f3-17d031b2ab41 8ee63d15fd405f1f808aa16cd6d7c1de hg19 Primary Tumor C3N-00580-03 C3N-00580.WXS.T.hg38 C3N-00580 LUAD WXS tumor CPT0069700006 72ed37e7-d1fe-4c50-822f-e21c597750ba_gdc_realn.bam 51193005090 BAM NA 57a9a0dd-4854-4e7b-8214-c7701474fe6d dbe58610eaced2705cc239e122a1849c hg38 Primary Tumor C3N-00580-03 -C3N-00645.MethArray.Green.T C3N-00645 SAR Methylation Array tumor CPT0084740009 202234380094_R01C01_Grn.idat 13676246 IDAT Green efc131c6-2329-4a6a-9605-a5cc25d640e6 3fbf9ea47cf0238177832b212ab0344a NA Primary Tumor C3N-00645-01 -C3N-00645.MethArray.Red.T C3N-00645 SAR Methylation Array tumor CPT0084740009 202234380094_R01C01_Red.idat 13676246 IDAT Red 032092fa-2903-4cad-ac41-36052ca364b9 19a62ab6d6c485471d961288b8039002 NA Primary Tumor C3N-00645-01 -C3N-00645.miRNA-Seq.A C3N-00645 SAR miRNA-Seq tissue_normal CPT0084780009 181113_UNC31-K00269_0164_AH23NNBBXY_TACAGC_S19_L005_R1_001.unaln.bam 175343542 BAM NA 30ac2596-3d44-4f0f-b969-f81c9cc55337 6511d814f82d0ecb29cbcdfe31689765 NA Solid Tissue Normal C3N-00645-06 -C3N-00645.miRNA-Seq.A.hg38 C3N-00645 SAR miRNA-Seq tissue_normal CPT0084780009 2ff6be34-53b9-4a00-87a5-5f44a3aa92f7_mirnaseq_gdc_realn.bam 195718824 BAM NA a9170bda-76e0-47e5-8f30-9a1b4df7d2b9 1bba877303b751955b4b30b4bf970795 hg38 Solid Tissue Normal C3N-00645-06 -C3N-00645.miRNA-Seq.T C3N-00645 SAR miRNA-Seq tumor CPT0084740006 180724_UNC32-K00270_0106_BHWK3MBBXX_GTCCGC_S40_L008_R1_001.unaln.bam 255718600 BAM NA 02548837-d431-4c05-b35e-118fd5dd1c9d 435a42635bbb4db2f1eaad80e8ccc2ae NA Primary Tumor C3N-00645-01 -C3N-00645.miRNA-Seq.T.hg38 C3N-00645 SAR miRNA-Seq tumor CPT0084740006 40331e20-386b-4635-8636-644d07a66bcb_mirnaseq_gdc_realn.bam 280248625 BAM NA 56bc003d-02d4-4166-bedf-de760f5fb69b c4745275a6abe4d4139cde73e006c50d hg38 Primary Tumor C3N-00645-01 -C3N-00645.RNA-Seq.chimeric.A.hg38 C3N-00645 SAR RNA-Seq tissue_normal CPT0084780009 034576bb-92ba-445a-a0b8-51a9a72d11cb.rna_seq.chimeric.gdc_realn.bam 23888399 BAM chimeric b5f8f9db-d26f-4320-b5a8-a69dec79c0a1 217b4cfa21336dad23d7268a38196a28 hg38 Solid Tissue Normal C3N-00645-06 -C3N-00645.RNA-Seq.chimeric.T.hg38 C3N-00645 SAR RNA-Seq tumor CPT0084740006 1c52fb9d-3b17-4124-bd2c-aeef43625b4b.rna_seq.chimeric.gdc_realn.bam 31876924 BAM chimeric 55ca9c6a-cd58-40eb-a439-90091784e492 6b3a5f4d12921b41951816c20dbd3743 hg38 Primary Tumor C3N-00645-01 -C3N-00645.RNA-Seq.genomic.A.hg38 C3N-00645 SAR RNA-Seq tissue_normal CPT0084780009 034576bb-92ba-445a-a0b8-51a9a72d11cb.rna_seq.genomic.gdc_realn.bam 11599157870 BAM genomic f6bd4526-7c65-41a5-8fa8-b16a6b5791e7 d4475808f924f4e170fa367765e310e3 hg38 Solid Tissue Normal C3N-00645-06 -C3N-00645.RNA-Seq.genomic.T.hg38 C3N-00645 SAR RNA-Seq tumor CPT0084740006 1c52fb9d-3b17-4124-bd2c-aeef43625b4b.rna_seq.genomic.gdc_realn.bam 7139516738 BAM genomic 41bee2ed-edc6-4705-af30-5537d5fc38e2 b3adacdf9ae098c7066b217f71dd25f3 hg38 Primary Tumor C3N-00645-01 -C3N-00645.RNA-Seq.R1.A C3N-00645 SAR RNA-Seq tissue_normal CPT0084780009 180606_UNC32-K00270_0097_AHVCKFBBXX_GTGGCC_S16_L005_R1_001.fastq.gz 4044793203 FASTQ NA e722ea36-fd8a-4b08-8d9d-f176c6af9bf4 aab7d2cf272257252f91f1f8d0866eb2 NA Solid Tissue Normal C3N-00645-06 -C3N-00645.RNA-Seq.R1.T C3N-00645 SAR RNA-Seq tumor CPT0084740006 171116_UNC31-K00269_0093_BHMFKJBBXX_GTGAAA_S2_L001_R1_001.fastq.gz 3411128169 FASTQ NA fa6f6113-b6ee-4562-b315-cb431266aa7e 35b8ee28491be14775e664a722db5c7a NA Primary Tumor C3N-00645-01 -C3N-00645.RNA-Seq.R2.A C3N-00645 SAR RNA-Seq tissue_normal CPT0084780009 180606_UNC32-K00270_0097_AHVCKFBBXX_GTGGCC_S16_L005_R2_001.fastq.gz 4384799259 FASTQ NA 6f38262e-e64e-4bd3-8757-86b804fe38a3 b8783fe34ec717810aeea99bb44b1d3b NA Solid Tissue Normal C3N-00645-06 -C3N-00645.RNA-Seq.R2.T C3N-00645 SAR RNA-Seq tumor CPT0084740006 171116_UNC31-K00269_0093_BHMFKJBBXX_GTGAAA_S2_L001_R2_001.fastq.gz 3600480828 FASTQ NA 46583f27-736f-462b-8f9d-cfaa50e2d622 4d571e4f848fba6290ba2ef7d92184d5 NA Primary Tumor C3N-00645-01 -C3N-00645.RNA-Seq.transcriptome.A.hg38 C3N-00645 SAR RNA-Seq tissue_normal CPT0084780009 034576bb-92ba-445a-a0b8-51a9a72d11cb.rna_seq.transcriptome.gdc_realn.bam 12242730495 BAM transcriptome 5917877c-ceff-4404-97d0-6b68795eae59 a07a780acf68570452004a7ee17a12d0 hg38 Solid Tissue Normal C3N-00645-06 -C3N-00645.RNA-Seq.transcriptome.T.hg38 C3N-00645 SAR RNA-Seq tumor CPT0084740006 1c52fb9d-3b17-4124-bd2c-aeef43625b4b.rna_seq.transcriptome.gdc_realn.bam 8397408433 BAM transcriptome 5a23763c-5dfa-48af-b2e2-8e32da5f01bf 74c9694004c80ebf845df30c6a9c02a6 hg38 Primary Tumor C3N-00645-01 -C3N-00645.WGS.A C3N-00645 SAR WGS tissue_normal CPT0084780006 CPT0084780006.WholeGenome.RP-1303.bam 58772518928 BAM NA a71caf81-c4d4-432a-8ff1-bd1e313d7df6 29c79ac24591cc96edf666a4644f22e1 hg19 Solid Tissue Normal C3N-00645-06 -C3N-00645.WGS.A.hg38 C3N-00645 SAR WGS tissue_normal CPT0084780006 d8b90ce5-c316-4fea-832c-167e1bca37a0_wgs_gdc_realn.bam 84648380633 BAM NA ffa046fe-3dba-4453-bf8c-e48b46e1ac6e 825179c31cc0358e3879198208a69ec4 hg38 Solid Tissue Normal C3N-00645-06 -C3N-00645.WGS.N C3N-00645 SAR WGS blood_normal CPT0084800002 CPT0084800002.WholeGenome.RP-1303.bam 50671546016 BAM NA 2b260d2d-e646-4e0b-9ddf-b54e53fc7a38 47a6b8c7cd8af464a7513755d7707463 hg19 Blood Derived Normal C3N-00645-31,C3N-00645-71 -C3N-00645.WGS.N.hg38 C3N-00645 SAR WGS blood_normal CPT0084800002 192fa7c7-9cc5-4765-bde2-4228fdc3294e_wgs_gdc_realn.bam 74603600162 BAM NA 56ea042f-8640-4d2e-9bf2-d1cbcc87e9c7 14dca9e05ff57643698983c649818cd8 hg38 Blood Derived Normal C3N-00645-31,C3N-00645-71 -C3N-00645.WGS.T C3N-00645 SAR WGS tumor CPT0084740009 CPT0084740009.WholeGenome.RP-1303.bam 64342852856 BAM NA 84ed70a4-caed-462a-9bf8-7779bf2515b9 afe1b4f67dcec6231684b7df19785a62 hg19 Primary Tumor C3N-00645-01 -C3N-00645.WGS.T.hg38 C3N-00645 SAR WGS tumor CPT0084740009 d2f0f96f-3364-4190-80ef-119ac1646066_wgs_gdc_realn.bam 93537636286 BAM NA acd651d1-3b10-43f9-84bc-2587406ef233 73ba15660d4bde6f3490aa7ac9b8231b hg38 Primary Tumor C3N-00645-01 -C3N-00645.WXS.A C3N-00645 SAR WXS tissue_normal CPT0084780006 CPT0084780006.WholeExome.RP-1303.bam 32837167593 BAM NA f6d76a80-fbfc-44ac-8d39-38aacaffcd5f eade68fecf4098974a42750fdf12a2b8 hg19 Solid Tissue Normal C3N-00645-06 -C3N-00645.WXS.A.hg38 C3N-00645 SAR WXS tissue_normal CPT0084780006 d8b90ce5-c316-4fea-832c-167e1bca37a0_wxs_gdc_realn.bam 43735436324 BAM NA de21a738-ef00-48af-87fe-b77a089c644f 6a68dfb19b52cd6c4ae7b8ca78758db5 hg38 Solid Tissue Normal C3N-00645-06 -C3N-00645.WXS.N C3N-00645 SAR WXS blood_normal CPT0084800002 CPT0084800002.WholeExome.RP-1303.bam 36010121266 BAM NA d4553c72-312d-47a2-aec0-6ad918f32fb7 4d5a8ea68044493bf97cc75fe9701305 hg19 Blood Derived Normal C3N-00645-31,C3N-00645-71 -C3N-00645.WXS.N.hg38 C3N-00645 SAR WXS blood_normal CPT0084800002 192fa7c7-9cc5-4765-bde2-4228fdc3294e_wxs_gdc_realn.bam 49818458792 BAM NA c3d8e719-4ba0-449a-8133-9225955a22b4 9276d3d921aaf0b175aa6bb3bcd01040 hg38 Blood Derived Normal C3N-00645-31,C3N-00645-71 -C3N-00645.WXS.T C3N-00645 SAR WXS tumor CPT0084740009 CPT0084740009.WholeExome.RP-1303.bam 24077127289 BAM NA 6d7c2e29-bcf1-4080-9975-51c7e27a0b1f 36a7aa0a56008a3996ba6f683ca6b1a7 hg19 Primary Tumor C3N-00645-01 -C3N-00645.WXS.T.hg38 C3N-00645 SAR WXS tumor CPT0084740009 d2f0f96f-3364-4190-80ef-119ac1646066_wxs_gdc_realn.bam 32947131146 BAM NA ab3e5e0a-1267-4557-846d-2e773e9dcb99 cfbc93cd8a23a780fcf7fdf3f1cec251 hg38 Primary Tumor C3N-00645-01 C3N-00646.MethArray.Green.A C3N-00646 CCRCC Methylation Array tissue_normal CPT0082010009 204930640061_R02C01_Grn.idat 13677885 IDAT Green c2e3843a-d03e-4570-8d7f-25979fafe0cc 8909becbd4e4088c6b8a511b170dc30b NA Solid Tissue Normal C3N-00646-06 C3N-00646.MethArray.Green.T C3N-00646 CCRCC Methylation Array tumor CPT0081990006 202184900111_R08C01_Grn.idat 13676246 IDAT Green 618149c4-73cf-4741-8f97-94c76712edc4 5102866a074a0f68528b3bb254727788 NA Primary Tumor C3N-00646-03 C3N-00646.MethArray.Green.T.HET_q9gojR C3N-00646 CCRCC Methylation Array tumor CPT0081980008 204372030023_R01C01_Grn.idat 13677895 IDAT Green 87c1ec50-0cf1-4dd8-827c-a224101e3eac 2e029695a24693566b3ab8aaf99a771e NA Primary Tumor C3N-00646-02 sample_tag=HET_q9gojR Duplicate item: CCRCC Tumor heterogeneity study aliquot @@ -24655,34 +23977,6 @@ C3N-00839.WXS.N C3N-00839 LSCC WXS blood_normal CPT0026180002 CPT0026180002.Whol C3N-00839.WXS.N.hg38 C3N-00839 LSCC WXS blood_normal CPT0026180002 516dbdf8-2b5a-4bb3-ae4e-95c4d3700e6c_gdc_realn.bam 39993924874 BAM NA 832224b4-903f-49d3-ab34-e5ca88d99a54 a1e52be3f580b71e621bc84e06e68166 hg38 Blood Derived Normal C3N-00839-71 C3N-00839.WXS.T C3N-00839 LSCC WXS tumor CPT0024970009 CPT0024970009.WholeExome.RP-1303.bam 35083401750 BAM NA 55cf3c99-3264-45fb-95c3-b25a9605c0dd 7ca20411ea3a7eee5ea35d6d5e6d7dda hg19 Primary Tumor C3N-00839-03 C3N-00839.WXS.T.hg38 C3N-00839 LSCC WXS tumor CPT0024970009 b8a43596-790d-461a-bc55-3c2bf876b979_gdc_realn.bam 47748726029 BAM NA 63b3f8cb-279c-4143-b608-6e52f757d48a 0c13a66d16e368e077efa6b5203bfaaf hg38 Primary Tumor C3N-00839-03 -C3N-00843.MethArray.Green.T C3N-00843 SAR Methylation Array tumor CPT0023990009 202176290095_R03C01_Grn.idat 13676226 IDAT Green 1f955b65-f089-4b43-92dd-c971b075c9f8 cd3b122cd03e3ee5ecf77e67a009e329 NA Primary Tumor C3N-00843-03 -C3N-00843.MethArray.Red.T C3N-00843 SAR Methylation Array tumor CPT0023990009 202176290095_R03C01_Red.idat 13676226 IDAT Red 15c43954-534e-4e46-a29c-54e83532a9f4 7df0bac4612f70c6b10623e7d105705f NA Primary Tumor C3N-00843-03 -C3N-00843.miRNA-Seq.A C3N-00843 SAR miRNA-Seq tissue_normal CPT0024000008 181119_UNC31-K00269_0165_AH27WCBBXY_GAGTGG_S47_L002_R1_001.unaln.bam 256528795 BAM NA 7c0d5730-f228-48d9-9cf0-91fc677de9f6 b6a4f337804f811bec59cb4de4de853c NA Solid Tissue Normal C3N-00843-06 -C3N-00843.miRNA-Seq.A.hg38 C3N-00843 SAR miRNA-Seq tissue_normal CPT0024000008 f11d406d-13f0-4d8f-93c8-05176be0e8db_mirnaseq_gdc_realn.bam 282180031 BAM NA 0fd04183-c02c-4843-8001-a5797a84e65d 2ddbee8f40acedfbd4341453570c21c7 hg38 Solid Tissue Normal C3N-00843-06 -C3N-00843.miRNA-Seq.T C3N-00843 SAR miRNA-Seq tumor CPT0023990014 181113_UNC31-K00269_0164_AH23NNBBXY_GACGAC_S17_L001_R1_001.unaln.bam 240272678 BAM NA ebb41522-e79b-49af-b1e2-11e043272ed3 d03cc9673b612f9430293288e0e11ed8 NA Primary Tumor C3N-00843-03 -C3N-00843.miRNA-Seq.T.hg38 C3N-00843 SAR miRNA-Seq tumor CPT0023990014 bb465d9f-24fa-421b-96ce-d5a4d4990188_mirnaseq_gdc_realn.bam 271338919 BAM NA e8586fb1-099b-467e-99d9-a3b7d8a12cd4 986eeb6025cd30a51b55efe289518cb1 hg38 Primary Tumor C3N-00843-03 -C3N-00843.RNA-Seq.chimeric.A.hg38 C3N-00843 SAR RNA-Seq tissue_normal CPT0024000008 98819a12-f1f2-4cdc-8e02-05aef1341cdf.rna_seq.chimeric.gdc_realn.bam 37539047 BAM chimeric d4f91966-6c26-4881-aa53-badf608f93ad eeb187c8b242f3afb6eb0ef3867d9287 hg38 Solid Tissue Normal C3N-00843-06 -C3N-00843.RNA-Seq.chimeric.T.hg38 C3N-00843 SAR RNA-Seq tumor CPT0023990014 a83143e1-6926-4a6c-8ab0-e83b74ce10a4.rna_seq.chimeric.gdc_realn.bam 58412915 BAM chimeric 8b207ef3-336a-4c50-a542-81e647581fa5 62ff5b399708e25d729bc1ee3bc2c628 hg38 Primary Tumor C3N-00843-03 -C3N-00843.RNA-Seq.genomic.A.hg38 C3N-00843 SAR RNA-Seq tissue_normal CPT0024000008 98819a12-f1f2-4cdc-8e02-05aef1341cdf.rna_seq.genomic.gdc_realn.bam 8879817135 BAM genomic c5bd477f-6732-4785-84c9-54afd0f79427 083933e018423328952f476255abe7d0 hg38 Solid Tissue Normal C3N-00843-06 -C3N-00843.RNA-Seq.genomic.T.hg38 C3N-00843 SAR RNA-Seq tumor CPT0023990014 a83143e1-6926-4a6c-8ab0-e83b74ce10a4.rna_seq.genomic.gdc_realn.bam 7433597547 BAM genomic b10c015f-faa2-456c-90f3-88d6e29516ae 7405356086c1dd2340110de6fd4d6898 hg38 Primary Tumor C3N-00843-03 -C3N-00843.RNA-Seq.R1.A C3N-00843 SAR RNA-Seq tissue_normal CPT0024000008 180516_UNC31-K00269_0130_BHV22JBBXX_ACTGAT_S21_L006_R1_001.fastq.gz 4216326711 FASTQ NA 818fd0da-1ed6-4cc6-9408-ad12e83b64e0 de1497cabaf622c81780553e6e341f9c NA Solid Tissue Normal C3N-00843-06 -C3N-00843.RNA-Seq.R1.T C3N-00843 SAR RNA-Seq tumor CPT0023990014 170823_UNC31-K00269_0075_AHLCW5BBXX_AGTCAA_S1_L007_R1_001.fastq.gz 3382977633 FASTQ NA 078e1480-efc7-4e55-ab38-3b0f72bfeded e74dce41b43626d8b578b58e8decd206 NA Primary Tumor C3N-00843-03 -C3N-00843.RNA-Seq.R2.A C3N-00843 SAR RNA-Seq tissue_normal CPT0024000008 180516_UNC31-K00269_0130_BHV22JBBXX_ACTGAT_S21_L006_R2_001.fastq.gz 4592688281 FASTQ NA a681e3a3-4666-4b85-8005-053bd59d5aa7 68ea9d21839909f9e7839acfedc9b874 NA Solid Tissue Normal C3N-00843-06 -C3N-00843.RNA-Seq.R2.T C3N-00843 SAR RNA-Seq tumor CPT0023990014 170823_UNC31-K00269_0075_AHLCW5BBXX_AGTCAA_S1_L007_R2_001.fastq.gz 3617235800 FASTQ NA 028d5c1d-29b6-4eff-b717-3c2b37dcbac2 c996322958621c31da9cf21c7e27baed NA Primary Tumor C3N-00843-03 -C3N-00843.RNA-Seq.transcriptome.A.hg38 C3N-00843 SAR RNA-Seq tissue_normal CPT0024000008 98819a12-f1f2-4cdc-8e02-05aef1341cdf.rna_seq.transcriptome.gdc_realn.bam 12556716933 BAM transcriptome f92f7a92-8cdc-42e4-a90b-d7071796007e ab59bb2c074352cc3c071d56240bcbea hg38 Solid Tissue Normal C3N-00843-06 -C3N-00843.RNA-Seq.transcriptome.T.hg38 C3N-00843 SAR RNA-Seq tumor CPT0023990014 a83143e1-6926-4a6c-8ab0-e83b74ce10a4.rna_seq.transcriptome.gdc_realn.bam 9046835974 BAM transcriptome 9a87847a-c057-41c1-bafe-c60d197cc744 702bd11c61b90e6be03b605f72ff5213 hg38 Primary Tumor C3N-00843-03 -C3N-00843.WGS.A C3N-00843 SAR WGS tissue_normal CPT0024000006 CPT0024000006.WholeGenome.RP-1303.bam 61383846182 BAM NA 0c59c89c-479f-4e16-9b3e-83fac2200642 83a986be07227c4bd29f634a91e17001 hg19 Solid Tissue Normal C3N-00843-06 -C3N-00843.WGS.A.hg38 C3N-00843 SAR WGS tissue_normal CPT0024000006 ef58350a-4eab-4ce4-948e-8cff9932a78d_wgs_gdc_realn.bam 89796045854 BAM NA 94f55881-e2b4-4c0a-b743-9d9fd4a40aa0 dab9e0a1a61d15835547b6b25d651001 hg38 Solid Tissue Normal C3N-00843-06 -C3N-00843.WGS.N C3N-00843 SAR WGS blood_normal CPT0024060002 CPT0024060002.WholeGenome.RP-1303.bam 78806199664 BAM NA e11093a1-c30a-48d9-a70c-8213b58bcb3b e692eaf725cafbd934c59107ab1aa338 hg19 Blood Derived Normal C3N-00843-71 -C3N-00843.WGS.N.hg38 C3N-00843 SAR WGS blood_normal CPT0024060002 77968c56-eeeb-4357-be18-1b433b9b1629_gdc_realn.bam 124058416872 BAM NA 6f570938-c54f-4de7-b667-6222b848be3d 401d779d31e68f998ddd89d348802656 hg38 Blood Derived Normal C3N-00843-71 -C3N-00843.WGS.T C3N-00843 SAR WGS tumor CPT0023990009 CPT0023990009.WholeGenome.RP-1303.bam 81242344600 BAM NA 1f638705-ee5b-49cc-8a72-c19fbdbe87f0 dbbd8bcef4e0b4f7a640017a28af79ca hg19 Primary Tumor C3N-00843-03 -C3N-00843.WGS.T.hg38 C3N-00843 SAR WGS tumor CPT0023990009 51c4d010-e813-4d96-aa59-dc0d0dcbd90a_gdc_realn.bam 119041242295 BAM NA 332395cb-0934-41f2-8483-364f326aa0b3 481487e7b5c9ddfdcf61c4210d51b186 hg38 Primary Tumor C3N-00843-03 -C3N-00843.WXS.A C3N-00843 SAR WXS tissue_normal CPT0024000006 CPT0024000006.WholeExome.RP-1303.bam 27853811624 BAM NA 5a773db4-e774-40c6-84a8-a44ebe60fd20 414f53ae790800345d78ff7751baad13 hg19 Solid Tissue Normal C3N-00843-06 -C3N-00843.WXS.A.hg38 C3N-00843 SAR WXS tissue_normal CPT0024000006 ef58350a-4eab-4ce4-948e-8cff9932a78d_wxs_gdc_realn.bam 37483499262 BAM NA d581f622-5000-4693-96fa-2104a19664b6 c1c69d21ab5601a12b0e2a189862390d hg38 Solid Tissue Normal C3N-00843-06 -C3N-00843.WXS.N C3N-00843 SAR WXS blood_normal CPT0024060002 CPT0024060002.WholeExome.RP-1303.bam 28990581283 BAM NA edf3e605-a0e1-4604-a9c0-81939ea37b11 e7535219869b91599e8b062612363475 hg19 Blood Derived Normal C3N-00843-71 -C3N-00843.WXS.N.hg38 C3N-00843 SAR WXS blood_normal CPT0024060002 77968c56-eeeb-4357-be18-1b433b9b1629_gdc_realn.bam 39573460333 BAM NA be81e6bd-644d-4d96-8508-f19e8259ce3d d83c371fa276ee887cb66d0f3a23d6c8 hg38 Blood Derived Normal C3N-00843-71 -C3N-00843.WXS.T C3N-00843 SAR WXS tumor CPT0023990009 CPT0023990009.WholeExome.RP-1303.bam 29717604389 BAM NA 3783fb15-4e99-43f9-b1dd-0bea799ec166 6a700628e2f09c2f3cdf3738f2b3bc06 hg19 Primary Tumor C3N-00843-03 -C3N-00843.WXS.T.hg38 C3N-00843 SAR WXS tumor CPT0023990009 51c4d010-e813-4d96-aa59-dc0d0dcbd90a_gdc_realn.bam 41081856405 BAM NA 2939b72d-02b7-4978-ba4a-f911401c5a91 47e3150a850a39939835e7bdae4ca92f hg38 Primary Tumor C3N-00843-03 C3N-00846.MethArray.Green.T C3N-00846 HNSCC Methylation Array tumor CPT0024810009 202163550007_R06C01_Grn.idat 13676226 IDAT Green c83e5b0f-84fd-4e33-8438-042ae10cb3f8 ed538e2a8aaa1442997bab1d4af2b47c NA Primary Tumor C3N-00846-02 C3N-00846.MethArray.Red.T C3N-00846 HNSCC Methylation Array tumor CPT0024810009 202163550007_R06C01_Red.idat 13676226 IDAT Red 521139dd-4ea1-4183-93d6-1b5464ce7831 5d46bfac28e040159f1ef21730dfa04c NA Primary Tumor C3N-00846-02 C3N-00846.miRNA-Seq.T C3N-00846 HNSCC miRNA-Seq tumor CPT0024810006 181113_UNC31-K00269_0164_AH23NNBBXY_CACTCA_S8_L003_R1_001.unaln.bam 259323326 BAM NA d5085069-3bec-4a1a-97c4-413226426357 2a0816749b52f7d98ebd223ec763af4f NA Primary Tumor C3N-00846-02 @@ -24807,62 +24101,6 @@ C3N-00852.WXS.T.HET_x2Wm0J.hg38 C3N-00852 CCRCC WXS tumor CPT0024660012 00d1ca04 C3N-00852.WXS.T.HET_x2WzNr C3N-00852 CCRCC WXS tumor CPT0024650012 CPT0024650012.WholeExome.RP-1303.bam 21611501385 BAM NA 3e21a8a7-29c7-4281-b40f-1428af5758bb 1d9d1d3ebad3436f2b8c7bb11ce46b63 hg19 Primary Tumor C3N-00852-01 sample_tag=HET_x2WzNr Duplicate item: CCRCC Tumor heterogeneity study aliquot C3N-00852.WXS.T.HET_x2WzNr.hg38 C3N-00852 CCRCC WXS tumor CPT0024650012 e57af370-4c03-43d2-b98e-7a11f2e7cc84_wxs_gdc_realn.bam 29369560222 BAM NA a34a9aee-6b72-459d-9b60-43133fabfe43 559055b8b579fa9ef4ed998f9f6426d1 hg38 Primary Tumor C3N-00852-01 sample_tag=HET_x2WzNr Duplicate item: CCRCC Tumor heterogeneity study aliquot C3N-00852.WXS.T.hg38 C3N-00852 CCRCC WXS tumor CPT0024670009 f9ac248b-a3c7-47f9-898e-8322e72b6b48_gdc_realn.bam 28220494250 BAM NA 6cc1f066-bd5a-40e4-931e-c0921cc4dc0e eadd4283f2d36608bfd97e344b23eea5 hg38 Primary Tumor C3N-00852-03 -C3N-00853.MethArray.Green.T C3N-00853 SAR Methylation Array tumor CPT0024290009 202176300111_R01C01_Grn.idat 13676226 IDAT Green 319f7bb4-4650-4ead-a211-07ae9674fbae 9175aaad2185f87feabcbe3a476018c7 NA Primary Tumor C3N-00853-03 -C3N-00853.MethArray.Red.T C3N-00853 SAR Methylation Array tumor CPT0024290009 202176300111_R01C01_Red.idat 13676226 IDAT Red becad6d7-3b06-4451-a4d1-774f1fa8273f 26ab4b1e59850bac791466be660088f6 NA Primary Tumor C3N-00853-03 -C3N-00853.miRNA-Seq.A C3N-00853 SAR miRNA-Seq tissue_normal CPT0024300009 181119_UNC31-K00269_0165_AH27WCBBXY_ACTGAT_S1_L001_R1_001.unaln.bam 356085350 BAM NA adf70426-9dcf-47b4-ae5a-9f3a39e8992a efaa67910d87c2f33efd2e17c89282d0 NA Solid Tissue Normal C3N-00853-06 -C3N-00853.miRNA-Seq.A.hg38 C3N-00853 SAR miRNA-Seq tissue_normal CPT0024300009 6e7625c3-ba0f-465f-97ce-4ead2d6b759b_mirnaseq_gdc_realn.bam 388994117 BAM NA 1629fe6f-62cf-4aee-93c2-4455e88c4cb0 218ab696a5569ca34c94f02ac8a19ead hg38 Solid Tissue Normal C3N-00853-06 -C3N-00853.miRNA-Seq.T C3N-00853 SAR miRNA-Seq tumor CPT0024290006 180924_UNC31-K00269_0154_AHWTMLBBXX_CAGATC_S20_L003_R1_001.unaln.bam 370661315 BAM NA 79bcf1d6-ad95-4cc8-a71a-323deebba97e a4be7b6081a5e8509501c41a925239b2 NA Primary Tumor C3N-00853-03 -C3N-00853.miRNA-Seq.T.hg38 C3N-00853 SAR miRNA-Seq tumor CPT0024290006 d2b46876-fdf7-489d-8b85-8ac7fd5229b1_mirnaseq_gdc_realn.bam 413722003 BAM NA 9e65abfe-b328-4869-9f8c-2f4bf52b9d20 2661b85622b4de867b4d715578d4d9e8 hg38 Primary Tumor C3N-00853-03 -C3N-00853.RNA-Seq.chimeric.A.hg38 C3N-00853 SAR RNA-Seq tissue_normal CPT0024300009 8c477064-2a07-48cb-a2f0-b43669db6303.rna_seq.chimeric.gdc_realn.bam 28695400 BAM chimeric f49090d2-6c73-4538-ba86-56bcba5f5f30 420ff5561d2e7c241ef77d00144abd14 hg38 Solid Tissue Normal C3N-00853-06 -C3N-00853.RNA-Seq.chimeric.T.hg38 C3N-00853 SAR RNA-Seq tumor CPT0024290006 f5c8ae58-501b-4096-b03b-fdb280755767.rna_seq.chimeric.gdc_realn.bam 61628986 BAM chimeric 73d1db42-9669-4718-a741-4a733bec7695 d09b0a35fdb4e552afede980f0888223 hg38 Primary Tumor C3N-00853-03 -C3N-00853.RNA-Seq.genomic.A.hg38 C3N-00853 SAR RNA-Seq tissue_normal CPT0024300009 8c477064-2a07-48cb-a2f0-b43669db6303.rna_seq.genomic.gdc_realn.bam 8333781448 BAM genomic 6790dedb-7cec-4f0b-8009-0af0d8df0a57 e42515ff7505d5929a3992c52ae1043d hg38 Solid Tissue Normal C3N-00853-06 -C3N-00853.RNA-Seq.genomic.T.hg38 C3N-00853 SAR RNA-Seq tumor CPT0024290006 f5c8ae58-501b-4096-b03b-fdb280755767.rna_seq.genomic.gdc_realn.bam 7800233638 BAM genomic 733321ba-31dc-4c45-a858-e049fe89eb30 0273da63857f021d0fb47914d3566a00 hg38 Primary Tumor C3N-00853-03 -C3N-00853.RNA-Seq.R1.A C3N-00853 SAR RNA-Seq tissue_normal CPT0024300009 180516_UNC31-K00269_0130_BHV22JBBXX_ATCACG_S19_L005_R1_001.fastq.gz 3651785702 FASTQ NA 45bbd054-c165-4a7e-bd8b-c537c2147298 6dc1258e5e36e9da0240fcb892f6e4be NA Solid Tissue Normal C3N-00853-06 -C3N-00853.RNA-Seq.R1.T C3N-00853 SAR RNA-Seq tumor CPT0024290006 170912_UNC31-K00269_0081_AHL3YKBBXX_GTTTCG_S2_L001_R1_001.fastq.gz 3409204732 FASTQ NA 34c962ed-dd37-47f1-b45c-c83dcb7dcccc 9ada34800a0caae30f1646df81e034fa NA Primary Tumor C3N-00853-03 -C3N-00853.RNA-Seq.R2.A C3N-00853 SAR RNA-Seq tissue_normal CPT0024300009 180516_UNC31-K00269_0130_BHV22JBBXX_ATCACG_S19_L005_R2_001.fastq.gz 3599638532 FASTQ NA db98065f-0d22-4a4a-9017-673936fba628 6e22829ac72ce361145f7bba628ff981 NA Solid Tissue Normal C3N-00853-06 -C3N-00853.RNA-Seq.R2.T C3N-00853 SAR RNA-Seq tumor CPT0024290006 170912_UNC31-K00269_0081_AHL3YKBBXX_GTTTCG_S2_L001_R2_001.fastq.gz 3788505394 FASTQ NA d8fba7b4-db7a-47d3-8acb-fc647043b70e 5316a9a782d4fee3239a25d382dba8c0 NA Primary Tumor C3N-00853-03 -C3N-00853.RNA-Seq.transcriptome.A.hg38 C3N-00853 SAR RNA-Seq tissue_normal CPT0024300009 8c477064-2a07-48cb-a2f0-b43669db6303.rna_seq.transcriptome.gdc_realn.bam 10600798799 BAM transcriptome b5063f57-aea7-4a97-b349-b58d7c2994fa bc28ecd274eb97d501380bb62a35861a hg38 Solid Tissue Normal C3N-00853-06 -C3N-00853.RNA-Seq.transcriptome.T.hg38 C3N-00853 SAR RNA-Seq tumor CPT0024290006 f5c8ae58-501b-4096-b03b-fdb280755767.rna_seq.transcriptome.gdc_realn.bam 7990409461 BAM transcriptome b33b9937-90a4-45b6-8da8-2cf619429301 cbafed2972210e4650160c786a00a5bc hg38 Primary Tumor C3N-00853-03 -C3N-00853.WGS.A C3N-00853 SAR WGS tissue_normal CPT0024300006 CPT0024300006.WholeGenome.RP-1303.bam 54433030711 BAM NA 0b4aa10e-91a0-44b1-975e-93d4d7498b51 cd3457bf611d56ee0ca45cbc0dcf73c6 hg19 Solid Tissue Normal C3N-00853-06 -C3N-00853.WGS.A.hg38 C3N-00853 SAR WGS tissue_normal CPT0024300006 bbd95734-ddf0-43d6-a3b0-fa064fe35e28_wgs_gdc_realn.bam 77936009116 BAM NA 3e881874-13cf-4584-b576-4b07df10aabd 92da21b7b99f2318454c0b5b92e62bcc hg38 Solid Tissue Normal C3N-00853-06 -C3N-00853.WGS.N C3N-00853 SAR WGS blood_normal CPT0024360002 CPT0024360002.WholeGenome.RP-1303.bam 79456257458 BAM NA c0797ed3-d8cc-44f5-9e11-479a2265f10e b5cd5f81217ba1239f6051016f6ccebe hg19 Blood Derived Normal C3N-00853-71 -C3N-00853.WGS.N.hg38 C3N-00853 SAR WGS blood_normal CPT0024360002 d43d6b14-4582-482f-b021-5ac480abe5d5_gdc_realn.bam 118695079187 BAM NA 96cd7a7f-8168-42ed-bd3d-88539508c9a0 771b01158da259311daabde458703ad5 hg38 Blood Derived Normal C3N-00853-71 -C3N-00853.WGS.T C3N-00853 SAR WGS tumor CPT0024290009 CPT0024290009.WholeGenome.RP-1303.bam 66522216147 BAM NA 43b6d5e9-05b1-4f0b-b81c-401758fdb3a3 f559e65163388e819a8c25248030b22d hg19 Primary Tumor C3N-00853-03 -C3N-00853.WGS.T.hg38 C3N-00853 SAR WGS tumor CPT0024290009 847c859f-a73f-467b-937e-6cf09d3fe79e_gdc_realn.bam 98861989731 BAM NA 6f30a1df-56b3-4f59-8d07-cf2a95dc255d f7c5447e2e3971688fd5b932f3388be5 hg38 Primary Tumor C3N-00853-03 -C3N-00853.WXS.A C3N-00853 SAR WXS tissue_normal CPT0024300006 CPT0024300006.WholeExome.RP-1303.bam 29242695611 BAM NA 87cc0328-8afd-4318-9fd1-8df12b936985 40c2ed79ce341d79b5b8b6b56a1c5c0a hg19 Solid Tissue Normal C3N-00853-06 -C3N-00853.WXS.A.hg38 C3N-00853 SAR WXS tissue_normal CPT0024300006 bbd95734-ddf0-43d6-a3b0-fa064fe35e28_wxs_gdc_realn.bam 39342760720 BAM NA fdb43676-7780-46a4-8ab9-4f066f99c547 aef0d1d1613c65b8d1d29b4d685a0ea9 hg38 Solid Tissue Normal C3N-00853-06 -C3N-00853.WXS.N C3N-00853 SAR WXS blood_normal CPT0024360002 CPT0024360002.WholeExome.RP-1303.bam 29754946350 BAM NA b0be1c0a-f700-4c13-adf2-93e2c9149ad7 14a0674e408baeccc17e39d521dcbb38 hg19 Blood Derived Normal C3N-00853-71 -C3N-00853.WXS.N.hg38 C3N-00853 SAR WXS blood_normal CPT0024360002 d43d6b14-4582-482f-b021-5ac480abe5d5_gdc_realn.bam 40175478799 BAM NA b3bc52da-f772-4b28-9788-eddfbfe9f766 8ff0b0e60f55991dd77f539389c6f873 hg38 Blood Derived Normal C3N-00853-71 -C3N-00853.WXS.T C3N-00853 SAR WXS tumor CPT0024290009 CPT0024290009.WholeExome.RP-1303.bam 59809661278 BAM NA 6d07502b-9766-4818-8583-59596248eb51 b783c7921f8fc4768fb79e0e9bf3ccd2 hg19 Primary Tumor C3N-00853-03 -C3N-00853.WXS.T.hg38 C3N-00853 SAR WXS tumor CPT0024290009 847c859f-a73f-467b-937e-6cf09d3fe79e_gdc_realn.bam 81774712617 BAM NA 6f317d30-4c89-4481-b90b-d598a0fd45eb 03c85af804da9ffe774afef3a3735cee hg38 Primary Tumor C3N-00853-03 -C3N-00855.MethArray.Green.T C3N-00855 SAR Methylation Array tumor CPT0024430009 202163530118_R06C01_Grn.idat 13676246 IDAT Green 13132170-1736-4f37-b390-f616832439b1 45c32a88779a9eba9842679d55226fee NA Primary Tumor C3N-00855-02 -C3N-00855.MethArray.Red.T C3N-00855 SAR Methylation Array tumor CPT0024430009 202163530118_R06C01_Red.idat 13676246 IDAT Red fb3de5ee-e929-4bdb-8a5c-01d8a759cc3d d318347ce8719c665c8778e96f18668d NA Primary Tumor C3N-00855-02 -C3N-00855.miRNA-Seq.A C3N-00855 SAR miRNA-Seq tissue_normal CPT0024450015 181108_UNC31-K00269_0162_AH255GBBXY_ATCACG_S25_L004_R1_001.unaln.bam 227626352 BAM NA 98a6bdab-7eee-4a07-8dcb-9ec09b26da07 e91688b30df0d05a200c0a65aab426ac NA Solid Tissue Normal C3N-00855-06 -C3N-00855.miRNA-Seq.A.hg38 C3N-00855 SAR miRNA-Seq tissue_normal CPT0024450015 871fa9d8-2213-4706-a698-5df97e295090_mirnaseq_gdc_realn.bam 253396823 BAM NA db56edd8-8dcf-4765-8eaf-ad883d7af087 d8956372d61cbd6cf3f25ec414cfb8f3 hg38 Solid Tissue Normal C3N-00855-06 -C3N-00855.miRNA-Seq.T C3N-00855 SAR miRNA-Seq tumor CPT0024430006 180924_UNC31-K00269_0154_AHWTMLBBXX_ACTTGA_S44_L003_R1_001.unaln.bam 288289617 BAM NA de0c7172-c3e5-49a5-babf-9c56d613da43 0272990271a6fbf6b49d689e58fda911 NA Primary Tumor C3N-00855-02 -C3N-00855.miRNA-Seq.T.hg38 C3N-00855 SAR miRNA-Seq tumor CPT0024430006 2797e909-ed54-49bf-a88e-c873e9c88ada_mirnaseq_gdc_realn.bam 316820176 BAM NA 5119708f-36de-42d1-b0f8-10fc2d2246b2 4ec20d6c585ee2af37a34ba223af127d hg38 Primary Tumor C3N-00855-02 -C3N-00855.RNA-Seq.chimeric.A.hg38 C3N-00855 SAR RNA-Seq tissue_normal CPT0024450015 7c2df2d4-70d8-4365-984e-5b49631da6d1.rna_seq.chimeric.gdc_realn.bam 122030360 BAM chimeric 5dbd946c-ad0f-4f5f-8dc7-5ea1f9e64710 0c5bd4d3a4df070c5deafb434a008210 hg38 Solid Tissue Normal C3N-00855-06 -C3N-00855.RNA-Seq.chimeric.T.hg38 C3N-00855 SAR RNA-Seq tumor CPT0024430006 f09378c8-9ab6-4ae6-8f42-6d38158769de.rna_seq.chimeric.gdc_realn.bam 67882934 BAM chimeric cc95616c-3fec-4111-a757-6d25d1afd654 d21feb2ee48085d191ed4814b7b99971 hg38 Primary Tumor C3N-00855-02 -C3N-00855.RNA-Seq.genomic.A.hg38 C3N-00855 SAR RNA-Seq tissue_normal CPT0024450015 7c2df2d4-70d8-4365-984e-5b49631da6d1.rna_seq.genomic.gdc_realn.bam 9027972846 BAM genomic 2dc9ef95-7f6a-47ff-b214-5dbed63ce066 8659cee7926bd3e5f8de27810c5a8e63 hg38 Solid Tissue Normal C3N-00855-06 -C3N-00855.RNA-Seq.genomic.T.hg38 C3N-00855 SAR RNA-Seq tumor CPT0024430006 f09378c8-9ab6-4ae6-8f42-6d38158769de.rna_seq.genomic.gdc_realn.bam 7995452941 BAM genomic 661f7806-43a9-45cf-a278-2ff0018a982a 333c36c55f9f12bfd081e8d440a61210 hg38 Primary Tumor C3N-00855-02 -C3N-00855.RNA-Seq.R1.A C3N-00855 SAR RNA-Seq tissue_normal CPT0024450015 180508_UNC31-K00269_0128_BHTY7KBBXX_ATCACG_S5_L008_R1_001.fastq.gz 4279203833 FASTQ NA f0b35299-07bd-4045-b0c6-488637b307e6 72e2625e6cf72cddb04c44e7331daa00 NA Solid Tissue Normal C3N-00855-06 -C3N-00855.RNA-Seq.R1.T C3N-00855 SAR RNA-Seq tumor CPT0024430006 170912_UNC31-K00269_0081_AHL3YKBBXX_CGTACG_S1_L001_R1_001.fastq.gz 3760239866 FASTQ NA 26bb3b4f-49d3-4cec-8418-9ee23f87d17e b2a6d22c6762990a9274198b8b433916 NA Primary Tumor C3N-00855-02 -C3N-00855.RNA-Seq.R2.A C3N-00855 SAR RNA-Seq tissue_normal CPT0024450015 180508_UNC31-K00269_0128_BHTY7KBBXX_ATCACG_S5_L008_R2_001.fastq.gz 4321030253 FASTQ NA 13c0600c-0769-432c-a34d-f6809ab9e6c6 69c4f18e86638472fd8ebdad85359d27 NA Solid Tissue Normal C3N-00855-06 -C3N-00855.RNA-Seq.R2.T C3N-00855 SAR RNA-Seq tumor CPT0024430006 170912_UNC31-K00269_0081_AHL3YKBBXX_CGTACG_S1_L001_R2_001.fastq.gz 4167559250 FASTQ NA 197ad2cb-078d-4fd1-a18b-9947657cee93 b5f071e8df473f0f51446b3ad0a2d98b NA Primary Tumor C3N-00855-02 -C3N-00855.RNA-Seq.transcriptome.A.hg38 C3N-00855 SAR RNA-Seq tissue_normal CPT0024450015 7c2df2d4-70d8-4365-984e-5b49631da6d1.rna_seq.transcriptome.gdc_realn.bam 13639885590 BAM transcriptome 62cae139-766e-4bc5-85e4-2b5b3ef344c9 384a356cab8d5d3a009e0f983237fc05 hg38 Solid Tissue Normal C3N-00855-06 -C3N-00855.RNA-Seq.transcriptome.T.hg38 C3N-00855 SAR RNA-Seq tumor CPT0024430006 f09378c8-9ab6-4ae6-8f42-6d38158769de.rna_seq.transcriptome.gdc_realn.bam 9769797529 BAM transcriptome 42f50b41-b887-4958-8362-b3fa151aeee8 df0d31d5a1c0743a57337c7dff330c09 hg38 Primary Tumor C3N-00855-02 -C3N-00855.WGS.A C3N-00855 SAR WGS tissue_normal CPT0024450006 CPT0024450006.WholeGenome.RP-1303.bam 59008656651 BAM NA e71b9318-4511-478d-ac47-a8ea8ecef3e5 5ecda6bf041a38879a667db104abe049 hg19 Solid Tissue Normal C3N-00855-06 -C3N-00855.WGS.A.hg38 C3N-00855 SAR WGS tissue_normal CPT0024450006 d12046d1-a74c-42b6-beb2-2febca2139f7_wgs_gdc_realn.bam 85515647313 BAM NA f11a2f61-a297-4fe6-a353-64e10e74d652 e2e157d3e80b46f401d2434be6e96cdb hg38 Solid Tissue Normal C3N-00855-06 -C3N-00855.WGS.N C3N-00855 SAR WGS blood_normal CPT0024510002 CPT0024510002.WholeGenome.RP-1303.bam 79057854142 BAM NA 24920136-ae87-4c02-b5e9-1d1a1eb910bd 8c8b3d21bdf42475bc451730b8562cd7 hg19 Blood Derived Normal C3N-00855-71 -C3N-00855.WGS.N.hg38 C3N-00855 SAR WGS blood_normal CPT0024510002 c94c0384-81e9-4f0b-a0a3-0b191640e7c2_gdc_realn.bam 120576373955 BAM NA ab3c6dec-1ac0-4897-801d-5b43336e3b3d 41494897da3d6c081d1446aeb5eed837 hg38 Blood Derived Normal C3N-00855-71 -C3N-00855.WGS.T C3N-00855 SAR WGS tumor CPT0024430009 CPT0024430009.WholeGenome.RP-1303.bam 77002599220 BAM NA 3406fc73-aac8-47bb-853a-d6b05f6babb3 93449227711b7863bd9c2ed46a4064ef hg19 Primary Tumor C3N-00855-02 -C3N-00855.WGS.T.hg38 C3N-00855 SAR WGS tumor CPT0024430009 5ee53dbc-f9cd-4fc5-a8b4-7ffde2316663_gdc_realn.bam 114522349751 BAM NA fa8755ec-986d-4cf3-9c2b-8ea8d942bb4f a0c7bd92cd81ce245c7b45721597f267 hg38 Primary Tumor C3N-00855-02 -C3N-00855.WXS.A C3N-00855 SAR WXS tissue_normal CPT0024450006 CPT0024450006.WholeExome.RP-1303.bam 37403075372 BAM NA e684a83b-e5b5-4e3b-8c5f-db47c601f472 78d1da3baf525c071ee42016d7e5eb77 hg19 Solid Tissue Normal C3N-00855-06 -C3N-00855.WXS.A.hg38 C3N-00855 SAR WXS tissue_normal CPT0024450006 d12046d1-a74c-42b6-beb2-2febca2139f7_wxs_gdc_realn.bam 50085879289 BAM NA 303a995b-c9cd-495d-b358-26de8890b384 6ff9816a5d48c8997e5fda5d3b0e3e46 hg38 Solid Tissue Normal C3N-00855-06 -C3N-00855.WXS.N C3N-00855 SAR WXS blood_normal CPT0024510002 CPT0024510002.WholeExome.RP-1303.bam 24705282417 BAM NA a8535ef2-084e-4433-b958-f4f3a9c64fb3 f7043c04231927129c7dcff98cff3f62 hg19 Blood Derived Normal C3N-00855-71 -C3N-00855.WXS.N.hg38 C3N-00855 SAR WXS blood_normal CPT0024510002 c94c0384-81e9-4f0b-a0a3-0b191640e7c2_gdc_realn.bam 33304474188 BAM NA 4a609705-0d7d-4aae-8290-b6b2398fdd1b 2b2a24dfbcd10904f9ee7c6847184a10 hg38 Blood Derived Normal C3N-00855-71 -C3N-00855.WXS.T C3N-00855 SAR WXS tumor CPT0024430009 CPT0024430009.WholeExome.RP-1303.bam 31813870552 BAM NA 20b05412-fa9c-4812-b1bc-6a8ab62ba35e 0d4dc47876cabb7931f77e62c1f66046 hg19 Primary Tumor C3N-00855-02 -C3N-00855.WXS.T.hg38 C3N-00855 SAR WXS tumor CPT0024430009 5ee53dbc-f9cd-4fc5-a8b4-7ffde2316663_gdc_realn.bam 43276706329 BAM NA 2534c9b5-2ae2-4970-ad16-b7820bf9a290 4efe9a6d4be43f2f6819056612b8ef08 hg38 Primary Tumor C3N-00855-02 C3N-00857.MethArray.Green.T C3N-00857 HNSCC Methylation Array tumor CPT0094350010 202234380099_R06C01_Grn.idat 13676231 IDAT Green 59d880f1-2082-46af-a4c6-7eb51925d43f cd34162ab23239db677bf9304e66a1f9 NA Primary Tumor C3N-00857-01,C3N-00857-02 C3N-00857.MethArray.Red.T C3N-00857 HNSCC Methylation Array tumor CPT0094350010 202234380099_R06C01_Red.idat 13676231 IDAT Red d0f6f6a1-4520-41bf-9dd8-ebd5e8743fc7 7f3b2ef62d7b105ae69de58ad6c441ea NA Primary Tumor C3N-00857-01,C3N-00857-02 C3N-00857.miRNA-Seq.T C3N-00857 HNSCC miRNA-Seq tumor CPT0094350007 180828_UNC32-K00270_0112_AHWTLNBBXX_CACCGG_S36_L007_R1_001.unaln.bam 210269048 BAM NA 48acb609-a84c-48dd-81a3-928324118d77 c2b20f81faaff6cbfe33b51d896bdadb NA Primary Tumor C3N-00857-01,C3N-00857-02 @@ -25225,23 +24463,6 @@ C3N-00959.WXS.N C3N-00959 LUAD WXS blood_normal CPT0080770002 CPT0080770002.Whol C3N-00959.WXS.N.hg38 C3N-00959 LUAD WXS blood_normal CPT0080770002 8e83ef46-d267-45b7-917e-b9e9e4bdb363_gdc_realn.bam 42133332087 BAM NA bb389d60-4210-4de4-bfb0-50e66395d661 fc090febec5d56d5519ed8733caceaeb hg38 Blood Derived Normal C3N-00959-31 C3N-00959.WXS.T C3N-00959 LUAD WXS tumor CPT0079830009 CPT0079830009.WholeExome.RP-1303.bam 22912595307 BAM NA ec261977-471a-4f31-ad62-bad86602e1ff 7d3f9eaea87e7e2d4ffa434a25b67524 hg19 Primary Tumor C3N-00959-02 C3N-00959.WXS.T.hg38 C3N-00959 LUAD WXS tumor CPT0079830009 ab74ba2c-c2fc-4dc1-9d4b-943680f7b486_gdc_realn.bam 31562863338 BAM NA a7f53506-333d-46c9-bc5f-9a5d66d1233b 69a66262c9d4f63ca57ed44df2f4f3d9 hg38 Primary Tumor C3N-00959-02 -C3N-01001.MethArray.Green.T C3N-01001 UCEC Methylation Array tumor CPT0078880009 202178770109_R03C01_Grn.idat 13676231 IDAT Green 7955db5e-77db-4612-9a60-0af557c170fa 2c321af53513583a14188dea7a10f4f5 NA Primary Tumor C3N-01001-03 -C3N-01001.MethArray.Red.T C3N-01001 UCEC Methylation Array tumor CPT0078880009 202178770109_R03C01_Red.idat 13676231 IDAT Red 23c4b5fe-2133-45a1-ac9f-a6b5b7d69330 6d34233a836fc0204e6c5f99a0e839de NA Primary Tumor C3N-01001-03 -C3N-01001.miRNA-Seq.T C3N-01001 UCEC miRNA-Seq tumor CPT0078880006 181012_UNC32-K00270_0124_AH223CBBXY_TCCCGA_S19_L008_R1_001.unaln.bam 213465454 BAM NA 48bf04f3-834d-40d2-9c87-eed948e7fb7f 83fbd9a2882aefd2e5431444df5e3d57 NA Primary Tumor C3N-01001-03 -C3N-01001.miRNA-Seq.T.hg38 C3N-01001 UCEC miRNA-Seq tumor CPT0078880006 2a1b3ac8-420d-4636-9c8b-2d2524d9a5eb_mirnaseq_gdc_realn.bam 237998908 BAM NA 5ef29c7e-8fbb-40bd-9699-1ec95c09c754 c5d187832a0297220ef6d3a1451c1d66 hg38 Primary Tumor C3N-01001-03 -C3N-01001.RNA-Seq.chimeric.T.hg38 C3N-01001 UCEC RNA-Seq tumor CPT0078880006 db35df03-47f7-4d54-9532-b2802c8792c6.rna_seq.chimeric.gdc_realn.bam 115537755 BAM chimeric be5d0c13-651e-462c-b9dd-de27f02e06c7 e3cdec552237fccc28d76d2ee97f6e14 hg38 Primary Tumor C3N-01001-03 -C3N-01001.RNA-Seq.genomic.T.hg38 C3N-01001 UCEC RNA-Seq tumor CPT0078880006 db35df03-47f7-4d54-9532-b2802c8792c6.rna_seq.genomic.gdc_realn.bam 7334165676 BAM genomic dacfd6fb-6294-4c22-96ec-fadbdc38153e 737185db05096da31693a6fe3c0880fa hg38 Primary Tumor C3N-01001-03 -C3N-01001.RNA-Seq.R1.T C3N-01001 UCEC RNA-Seq tumor CPT0078880006 170905_UNC31-K00269_0079_AHLCF7BBXX_GTTTCG_S7_L002_R1_001.fastq.gz 3693102931 FASTQ NA f8c5ac84-6343-4a3c-9dcb-a04b0e23bb62 294129d3d0a2dd68ea822a5ae97ae913 NA Primary Tumor C3N-01001-03 -C3N-01001.RNA-Seq.R2.T C3N-01001 UCEC RNA-Seq tumor CPT0078880006 170905_UNC31-K00269_0079_AHLCF7BBXX_GTTTCG_S7_L002_R2_001.fastq.gz 3987944999 FASTQ NA e612b542-1d0e-45ee-84b8-60d39b004a6c 833e1ed42c26f9a87c227132f475001b NA Primary Tumor C3N-01001-03 -C3N-01001.RNA-Seq.transcriptome.T.hg38 C3N-01001 UCEC RNA-Seq tumor CPT0078880006 db35df03-47f7-4d54-9532-b2802c8792c6.rna_seq.transcriptome.gdc_realn.bam 12477852145 BAM transcriptome 3fa8c613-8d4a-4d56-a643-65b27e612e6a 637484d0780d74bbd0f9bd0a934be86a hg38 Primary Tumor C3N-01001-03 -C3N-01001.WGS.N C3N-01001 UCEC WGS blood_normal CPT0078920002 CPT0078920002.WholeGenome.RP-1303.bam 74151600707 BAM NA 43f32921-afd0-4a44-9ad1-36b79a370de6 f5622732a5fcb2e4a5dad634b4e32d1a hg19 Blood Derived Normal C3N-01001-31 -C3N-01001.WGS.N.hg38 C3N-01001 UCEC WGS blood_normal CPT0078920002 d02e9e05-81d1-4fa8-a227-ca3cec105ba9_gdc_realn.bam 108834310807 BAM NA 01c15e02-acbc-49f1-b489-5e171548b0e8 c67bde545f8f05bbd28acd1b06bf3239 hg38 Blood Derived Normal C3N-01001-31 -C3N-01001.WGS.T C3N-01001 UCEC WGS tumor CPT0078880009 CPT0078880009.WholeGenome.RP-1303.bam 85049399428 BAM NA dd02866a-341f-4989-bbfc-37dce887e2bb 0e022a3edeb46175e250a4bdf4866eab hg19 Primary Tumor C3N-01001-03 -C3N-01001.WGS.T.hg38 C3N-01001 UCEC WGS tumor CPT0078880009 9b7b8a64-7bb9-4c81-ac55-726b9577429a_gdc_realn.bam 125890075212 BAM NA 7d46687a-97ce-4fe4-adb0-3da1045e32d4 d30458479807b56458517b4e3a9efcd6 hg38 Primary Tumor C3N-01001-03 -C3N-01001.WXS.N C3N-01001 UCEC WXS blood_normal CPT0078920002 CPT0078920002.WholeExome.RP-1303.bam 30819058866 BAM NA 575da3b6-7566-454b-afbd-ca5de45d45af 5654156ef8aff08289ff7933f127db5d hg19 Blood Derived Normal C3N-01001-31 -C3N-01001.WXS.N.hg38 C3N-01001 UCEC WXS blood_normal CPT0078920002 d02e9e05-81d1-4fa8-a227-ca3cec105ba9_gdc_realn.bam 42554421810 BAM NA 925e35ea-964c-467c-af2a-a7784b0678c5 ca1e84f3932cf364af6211d13ec5b209 hg38 Blood Derived Normal C3N-01001-31 -C3N-01001.WXS.T C3N-01001 UCEC WXS tumor CPT0078880009 CPT0078880009.WholeExome.RP-1303.bam 33787481023 BAM NA 374b49b4-bc8f-4053-86cb-456beb3f623a f5c39858323d13398cd9d65f2a8eb43f hg19 Primary Tumor C3N-01001-03 -C3N-01001.WXS.T.hg38 C3N-01001 UCEC WXS tumor CPT0078880009 9b7b8a64-7bb9-4c81-ac55-726b9577429a_gdc_realn.bam 46593925318 BAM NA 8ef06338-11c6-441b-8c8c-f3c546442f8a 160e92089d304386dc8086f89f804de3 hg38 Primary Tumor C3N-01001-03 C3N-01003.MethArray.Green.T C3N-01003 UCEC Methylation Array tumor CPT0078610009 202176290046_R06C01_Grn.idat 13676215 IDAT Green fd6b15e7-ba66-45e8-b6e2-7fda69b69531 f11b46ea0fa463bd67268a5d06b3bbf5 NA Primary Tumor C3N-01003-01 C3N-01003.MethArray.Red.T C3N-01003 UCEC Methylation Array tumor CPT0078610009 202176290046_R06C01_Red.idat 13676215 IDAT Red 26617b88-8f34-4ee8-bdaa-049e67e9f09e db668818a1f9c5e58ceabf2a99d834a0 NA Primary Tumor C3N-01003-01 C3N-01003.miRNA-Seq.A C3N-01003 UCEC miRNA-Seq tissue_normal CPT0078620004 181108_UNC31-K00269_0163_BH23TVBBXY_ACTTGA_S8_L005_R1_001.unaln.bam 241823904 BAM NA c01a88a0-381b-459c-993f-cf5085b0124d 6220ce6b33a3c12726a3be9ca0bdea2f NA Solid Tissue Normal C3N-01003-05 @@ -26283,6 +25504,10 @@ C3N-01175.RNA-Seq.R2.A C3N-01175 CCRCC RNA-Seq tissue_normal CPT0078670006 17121 C3N-01175.RNA-Seq.R2.T C3N-01175 CCRCC RNA-Seq tumor CPT0078660006 170830_UNC31-K00269_0078_AHLCVMBBXX_CCGTCC_S19_L006_R2_001.fastq.gz 3996118521 FASTQ NA 8524e1fc-ec06-4a66-9a6d-7c407fc2de99 330ce0c0f139a7403239214a6913ae90 NA Primary Tumor C3N-01175-01 C3N-01175.RNA-Seq.transcriptome.A.hg38 C3N-01175 CCRCC RNA-Seq tissue_normal CPT0078670006 7ec39023-9f8b-43d0-85e7-8b125aac72ac.rna_seq.transcriptome.gdc_realn.bam 10389303362 BAM transcriptome 34a3b353-c2d1-4f32-9645-8461867363dd 9d3f268c0cb74e645a5565a94913da88 hg38 Solid Tissue Normal C3N-01175-05 C3N-01175.RNA-Seq.transcriptome.T.hg38 C3N-01175 CCRCC RNA-Seq tumor CPT0078660006 d4a3bdb3-48c8-4213-a46f-e8e6eadb47b4.rna_seq.transcriptome.gdc_realn.bam 10580792604 BAM transcriptome b1a7a8f2-3ec9-40aa-a806-eb67690739c1 5bf8df6be5edb95ef47c40706468cedb hg38 Primary Tumor C3N-01175-01 +C3N-01175.scRNA-Seq.R1.T C3N-01175 CCRCC scRNA-Seq tumor CPT0078660004 20220127_WUSTL_TWFU-CPT0078660004-Y1N1Z1_1Bn1_1_ATGACGTCGC+AGGTCAGGAT_S3_L003_R1_001.fastq.gz 3571524420 FASTQ NA 9b3857f9-b778-4de2-aa79-d79229fd1626 fd611575e4b87835e84058e4e4e07b6f NA Primary Tumor C3N-01175-01 +C3N-01175.scRNA-Seq.R1.T C3N-01175 CCRCC scRNA-Seq tumor CPT0078660004 20220127_WUSTL_TWFU-CPT0078660004-Y1N1Z1_1Bn1_1_ATGACGTCGC+AGGTCAGGAT_S7_L004_R1_001.fastq.gz 891052523 FASTQ NA 0b69529a-2dbf-4fd2-8f5e-9d02c333d6e9 35fddce9045fcf988cd41c42123e1595 NA Primary Tumor C3N-01175-01 +C3N-01175.scRNA-Seq.R2.T C3N-01175 CCRCC scRNA-Seq tumor CPT0078660004 20220127_WUSTL_TWFU-CPT0078660004-Y1N1Z1_1Bn1_1_ATGACGTCGC+AGGTCAGGAT_S3_L003_R2_001.fastq.gz 12224467616 FASTQ NA 819134a0-dd7b-4c19-926b-60f2ac7c451e 211d28d16857f942c6c3f45cda164cf0 NA Primary Tumor C3N-01175-01 +C3N-01175.scRNA-Seq.R2.T C3N-01175 CCRCC scRNA-Seq tumor CPT0078660004 20220127_WUSTL_TWFU-CPT0078660004-Y1N1Z1_1Bn1_1_ATGACGTCGC+AGGTCAGGAT_S7_L004_R2_001.fastq.gz 3037710136 FASTQ NA 4e30e442-2f3e-4d5c-9ee4-7c1e0d8bf215 f52f87f3427a42462200827dd0f52365 NA Primary Tumor C3N-01175-01 C3N-01175.WGS.A C3N-01175 CCRCC WGS tissue_normal CPT0078670009 CPT0078670009.WholeGenome.RP-1303.bam 71890074328 BAM NA 5c4f4c88-529b-490f-87b3-4ca3808010c3 23d5027d204087f53196d6368382f715 hg19 Solid Tissue Normal C3N-01175-05 C3N-01175.WGS.A.hg38 C3N-01175 CCRCC WGS tissue_normal CPT0078670009 24e37fc2-22e8-4c09-bbcd-e39c00715a95_wgs_gdc_realn.bam 104486549337 BAM NA 13c9c503-aded-4fc8-ada5-ab0ce27bb69e 085920e1372012858c2e7501e5376a87 hg38 Solid Tissue Normal C3N-01175-05 C3N-01175.WGS.N C3N-01175 CCRCC WGS blood_normal CPT0078700002 CPT0078700002.WholeGenome.RP-1303.bam 74511003816 BAM NA 26b4a4d1-cd8a-45a2-9a1b-f676c1631336 50fd08bddc31e55f2913371555de279f hg19 Blood Derived Normal C3N-01175-31 @@ -26411,6 +25636,8 @@ C3N-01180.RNA-Seq.genomic.T.hg38 C3N-01180 CCRCC RNA-Seq tumor CPT0088970006 133 C3N-01180.RNA-Seq.R1.T C3N-01180 CCRCC RNA-Seq tumor CPT0088970006 170908_UNC31-K00269_0080_BHLJ52BBXX_ACTGAT_S13_L004_R1_001.fastq.gz 3645122689 FASTQ NA d07af196-f7b8-42ef-b95a-4403e8ede3f3 58968de66ae9232546847ab5f703f202 NA Primary Tumor C3N-01180-01 C3N-01180.RNA-Seq.R2.T C3N-01180 CCRCC RNA-Seq tumor CPT0088970006 170908_UNC31-K00269_0080_BHLJ52BBXX_ACTGAT_S13_L004_R2_001.fastq.gz 3897734313 FASTQ NA 59baaed9-9a10-4bfe-9657-5ac24fdbd053 9063a284837d98374e6e2dff30863f37 NA Primary Tumor C3N-01180-01 C3N-01180.RNA-Seq.transcriptome.T.hg38 C3N-01180 CCRCC RNA-Seq tumor CPT0088970006 1332bf19-4e07-4cdf-abc7-5359ba62a54d.rna_seq.transcriptome.gdc_realn.bam 10661221615 BAM transcriptome 861830de-bb5d-45f4-8525-6942e0749d3a 6a7ca2192054376fd0fb30ccc93150dd hg38 Primary Tumor C3N-01180-01 +C3N-01180.scRNA-Seq.R1.T C3N-01180 CCRCC scRNA-Seq tumor CPT0088970013 20220127_WUSTL_TWFU-CPT0088970013-Y1N1Z1_1Bn1_1_AAGGGCCGCA+CTGATTCCTC_S4_L003_R1_001.fastq.gz 6080929668 FASTQ NA 3670a1d8-e41f-4ed1-b823-2ea7edf35a18 e496cabf15c2b1c31e79dbb80ac8d94a NA Primary Tumor C3N-01180-01 +C3N-01180.scRNA-Seq.R2.T C3N-01180 CCRCC scRNA-Seq tumor CPT0088970013 20220127_WUSTL_TWFU-CPT0088970013-Y1N1Z1_1Bn1_1_AAGGGCCGCA+CTGATTCCTC_S4_L003_R2_001.fastq.gz 20888751929 FASTQ NA 54bcd617-1468-4c39-bf55-9761602d5c43 4ae0bebdb83791746c14d0da74e119e4 NA Primary Tumor C3N-01180-01 C3N-01180.WGS.N C3N-01180 CCRCC WGS blood_normal CPT0089010002 CPT0089010002.WholeGenome.RP-1303.bam 65469560970 BAM NA f5d9c481-d4c6-4b37-aa82-5d2b9c23d96a 32b3c893635e13da71e3e358f81665ba hg19 Blood Derived Normal C3N-01180-31 C3N-01180.WGS.N.hg38 C3N-01180 CCRCC WGS blood_normal CPT0089010002 05e1d252-9d46-47b7-9948-9b5dd30e67e3_gdc_realn.bam 97287608468 BAM NA bcc33626-4667-47c9-a402-8746520a80dd 0aaceb35d90ee316168690cb3c12e7b6 hg38 Blood Derived Normal C3N-01180-31 C3N-01180.WGS.T C3N-01180 CCRCC WGS tumor CPT0088970009 CPT0088970009.WholeGenome.RP-1303.bam 66457230201 BAM NA a8e8e902-9cf8-4ed2-a74a-627eb36fe03f ce8e05bf68d3c84789823cd792886af7 hg19 Primary Tumor C3N-01180-01 @@ -26524,6 +25751,11 @@ C3N-01197.WXS.T.hg38 C3N-01197 GBM WXS tumor CPT0078480013 8a4a56fd-dd41-4555-b2 C3N-01199.MethArray.Green.T C3N-01199 GBM Methylation Array tumor CPT0457680011 205987780179_R05C01_Grn.idat 13677940 IDAT Green 7cfef310-16d3-4e83-ade2-cab54a591e2a df039c0706457135585e665474873fa2 NA Primary Tumor C3N-01199-04 C3N-01199.MethArray.Red.T C3N-01199 GBM Methylation Array tumor CPT0457680011 205987780179_R05C01_Red.idat 13677940 IDAT Red 82e35981-d14d-4901-b85a-0da82e7dbf87 e28beecf5bc080a642ce933c92e170b1 NA Primary Tumor C3N-01199-04 C3N-01199.miRNA-Seq.T C3N-01199 GBM miRNA-Seq tumor CPT0457680008 220505_UNC32-K00270_0319_AHMV2KBBXY_CTATAC_S7_L003_R1_001.unaln.bam 264368830 BAM NA 64dab22d-ddf0-4ceb-9775-95cb13aba156 63b556759c4323d4308c452bf5397ad1 NA Primary Tumor C3N-01199-04 +C3N-01199.miRNA-Seq.T.hg38 C3N-01199 GBM miRNA-Seq tumor CPT0457680008 35e119ee-ff02-4ac2-9cfa-bc26defda320_mirnaseq_gdc_realn.bam 301722755 BAM NA 1d9c73a5-81bc-451c-a43a-d906405f7445 38c44fa8740549cf939d0ae836fe13d0 hg38 Primary Tumor C3N-01199-04 +C3N-01199.RNA-Seq.R1.T C3N-01199 GBM RNA-Seq tumor CPT0457680008 220603_UNC32-K00270_0322_BHNKFLBBXY_GGTACCTT-AAGACGTC_S4_L006_R1_001.fastq.gz 5000286535 FASTQ NA 742a45a1-2eb8-44d5-912e-8747b99a93d4 2153ef9bd3c1d42588e4749539a8fdbf NA Primary Tumor C3N-01199-04 +C3N-01199.RNA-Seq.R2.T C3N-01199 GBM RNA-Seq tumor CPT0457680008 220603_UNC32-K00270_0322_BHNKFLBBXY_GGTACCTT-AAGACGTC_S4_L006_R2_001.fastq.gz 5203845866 FASTQ NA d457808c-dc8e-4904-9c85-9a6c5fff4b0a 02bce17f1695973dd385d8cea6689575 NA Primary Tumor C3N-01199-04 +C3N-01199.WGS.N C3N-01199 GBM WGS blood_normal CPT0402850001 CPT0402850001.WholeGenome.RP-2158.bam 60409941422 BAM NA 9ac6dbcf-a44d-4871-bc05-54e7ad5b79da bd52da88c8c74ad14e85d9a240018fc4 hg19 Blood Derived Normal C3N-01199-31 +C3N-01199.WGS.T C3N-01199 GBM WGS tumor CPT0457680011 CPT0457680011.WholeGenome.RP-2158.bam 115148443436 BAM NA ff7d7777-36ac-47c6-8c34-7a0fa07b17c8 62b873808eccd22e0b3272f8473fdc60 hg19 Primary Tumor C3N-01199-04 C3N-01200.MethArray.Green.A C3N-01200 CCRCC Methylation Array tissue_normal CPT0075170009 203027380024_R02C01_Grn.idat 13676241 IDAT Green 13f31e09-fb0c-4826-98b0-35e9ac240679 a4532e636b295ff7479a800be4fab853 NA Solid Tissue Normal C3N-01200-06 C3N-01200.MethArray.Green.T C3N-01200 CCRCC Methylation Array tumor CPT0075130009 202184990059_R08C01_Grn.idat 13676231 IDAT Green 3ceb6106-0d95-40e2-8993-b545fc0ea3ef cc153bcdbbc599278d49da61362a91a4 NA Primary Tumor C3N-01200-02 C3N-01200.MethArray.Green.T.HET_xBGLLn C3N-01200 CCRCC Methylation Array tumor CPT0075160012 204372030023_R04C01_Grn.idat 13677895 IDAT Green 45deb597-b3eb-4918-81ee-e386fb0e93e9 24a0c1e10008a3a1b659507de3022f9c NA Primary Tumor C3N-01200-05 sample_tag=HET_xBGLLn Duplicate item: CCRCC Tumor heterogeneity study aliquot @@ -26628,8 +25860,8 @@ C3N-01211.WXS.N C3N-01211 UCEC WXS blood_normal CPT0076020002 CPT0076020002.Whol C3N-01211.WXS.N.hg38 C3N-01211 UCEC WXS blood_normal CPT0076020002 a5ae9005-f7c0-4291-b288-df8380b29a04_gdc_realn.bam 36601792011 BAM NA f275ea09-8877-4159-bdee-d8781d22e740 053e61867b0554dd7e6e4fbe1a19b2cf hg38 Blood Derived Normal C3N-01211-71 C3N-01211.WXS.T C3N-01211 UCEC WXS tumor CPT0075900009 CPT0075900009.WholeExome.RP-1303.bam 34143045947 BAM NA 328fa8fc-696f-4d47-828f-7cf2cd34df9e f53be1b3e89204e6542be300e937b133 hg19 Primary Tumor C3N-01211-01 C3N-01211.WXS.T.hg38 C3N-01211 UCEC WXS tumor CPT0075900009 d29c7529-d7da-4ee6-b7c3-6af5083003af_gdc_realn.bam 46717493322 BAM NA 37591282-8e97-4e53-82b4-13eca58214b8 6e86e47b1d4a8ebeaade6ebd40890b5a hg38 Primary Tumor C3N-01211-01 -C3N-01212.MethArray.Green.T C3N-01212 UCEC Methylation Array tumor CPT0075380009 202176300111_R08C01_Grn.idat 13676226 IDAT Green a715d355-a961-43a2-b008-9c2bc0cd45a3 076102fb4e1161ced0bbe09d9883df22 NA Primary Tumor C3N-01212-03 -C3N-01212.MethArray.Red.T C3N-01212 UCEC Methylation Array tumor CPT0075380009 202176300111_R08C01_Red.idat 13676226 IDAT Red fe8404a4-6e0c-4506-8f7a-ba7e8df7494e 824438b87cb96dfdc440f8590c3540ab NA Primary Tumor C3N-01212-03 +C3N-01212.MethArray.Green.T.UNK_rv8PQk C3N-01212 UCEC Methylation Array tumor CPT0075380009 202176300111_R08C01_Grn.idat 13676226 IDAT Green a715d355-a961-43a2-b008-9c2bc0cd45a3 076102fb4e1161ced0bbe09d9883df22 NA Primary Tumor C3N-01212-03 sample_tag=UNK_rv8PQk The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-01212.MethArray.Red.T.UNK_rv8PQk C3N-01212 UCEC Methylation Array tumor CPT0075380009 202176300111_R08C01_Red.idat 13676226 IDAT Red fe8404a4-6e0c-4506-8f7a-ba7e8df7494e 824438b87cb96dfdc440f8590c3540ab NA Primary Tumor C3N-01212-03 sample_tag=UNK_rv8PQk The WGS data for this aliquot failed the GDC harmonization pipeline. C3N-01212.miRNA-Seq.T C3N-01212 UCEC miRNA-Seq tumor CPT0075380006 181012_UNC32-K00270_0124_AH223CBBXY_ATGTCA_S36_L007_R1_001.unaln.bam 203254036 BAM NA 78e018e7-01e5-451c-a99a-625b7c4aacbc d157102136863e1a2db5991724861c5b NA Primary Tumor C3N-01212-03 C3N-01212.miRNA-Seq.T.hg38 C3N-01212 UCEC miRNA-Seq tumor CPT0075380006 cf9259fc-ea3c-459c-a78a-057177b629a3_mirnaseq_gdc_realn.bam 228094544 BAM NA 6fecbc3b-f9f5-498d-996d-a79400ad92b8 88eff3c5cfda2dc16cc4bca12750582f hg38 Primary Tumor C3N-01212-03 C3N-01212.RNA-Seq.chimeric.T.hg38 C3N-01212 UCEC RNA-Seq tumor CPT0075380006 2aca75ad-6dc7-4688-bac2-1503f9ae8850.rna_seq.chimeric.gdc_realn.bam 437341720 BAM chimeric 58287dc5-4ad5-4397-8711-ac5346c816fd d663a9cd4b0d1a6b751060a03eba3855 hg38 Primary Tumor C3N-01212-03 @@ -26642,14 +25874,14 @@ C3N-01212.RNA-Seq.R2.T C3N-01212 UCEC RNA-Seq tumor CPT0075380006 170905_UNC31-K C3N-01212.RNA-Seq.R2.T C3N-01212 UCEC RNA-Seq tumor CPT0075420001 20210714_P1_D11_WB7988_plate1_S47_R2_001.fastq.gz 9636009516 FASTQ NA a24c88f8-e3d9-48c7-8db8-bca6d591bade edc6079edf83dc0c2bf851b42ca06060 NA Primary Tumor C3N-01212-13 C3N-01212.RNA-Seq.transcriptome.T.hg38 C3N-01212 UCEC RNA-Seq tumor CPT0075380006 2aca75ad-6dc7-4688-bac2-1503f9ae8850.rna_seq.transcriptome.gdc_realn.bam 12181868455 BAM transcriptome e7abcf1f-b30f-4010-a76e-cfabfdee5afe e7dd707c19cb4295a8026ffa2ffe5261 hg38 Primary Tumor C3N-01212-03 C3N-01212.RNA-Seq.transcriptome.T.hg38 C3N-01212 UCEC RNA-Seq tumor CPT0075420001 7303be79-a3ba-4c13-8693-8677bfa0cbdc.rna_seq.transcriptome.gdc_realn.bam 9819944242 BAM transcriptome 64f15f47-cc41-49cc-abf3-1f79bedabc2b 197d8a08786fb5a84369aae3bb44e702 hg38 Primary Tumor C3N-01212-13 -C3N-01212.WGS.N C3N-01212 UCEC WGS blood_normal CPT0075440002 CPT0075440002.WholeGenome.RP-1303.bam 65852195825 BAM NA f94f0c39-afc8-44c9-b319-3b81d96c3100 0cb251d3fba8d7fed71d9b20c31ac67a hg19 Blood Derived Normal C3N-01212-71 -C3N-01212.WGS.N.hg38 C3N-01212 UCEC WGS blood_normal CPT0075440002 de27373b-d06d-4246-bfbd-1fb88cc0f8fd_gdc_realn.bam 98497925335 BAM NA 4bc8e960-760d-4cf1-b6b3-b52374645e4f b951f08d59b9aba9c90b64590d030344 hg38 Blood Derived Normal C3N-01212-71 -C3N-01212.WGS.T C3N-01212 UCEC WGS tumor CPT0075380009 CPT0075380009.WholeGenome.RP-1303.bam 69308469108 BAM NA 6dd3d8c6-5562-4319-8c95-1c73871961e8 dd8d6e81a28d2902e80709b4e82e62ac hg19 Primary Tumor C3N-01212-03 -C3N-01212.WGS.T.hg38 C3N-01212 UCEC WGS tumor CPT0075380009 26e50c35-a756-496a-a377-639add0619ee_gdc_realn.bam 103288384141 BAM NA aaddc8fa-2b31-41ff-8cbe-468c88441734 235b55651eab869a64c0cfaf70332c77 hg38 Primary Tumor C3N-01212-03 -C3N-01212.WXS.N C3N-01212 UCEC WXS blood_normal CPT0075440002 CPT0075440002.WholeExome.RP-1303.bam 35903328030 BAM NA 64fc0220-163a-4cfe-b176-8a23a2bd8880 702c181994420b5f211c93ca76800a06 hg19 Blood Derived Normal C3N-01212-71 -C3N-01212.WXS.N.hg38 C3N-01212 UCEC WXS blood_normal CPT0075440002 de27373b-d06d-4246-bfbd-1fb88cc0f8fd_gdc_realn.bam 48337338396 BAM NA 09d74eea-1860-4270-85dc-ce5bebbf6577 36eede3c7048b55b0859d19e84740e68 hg38 Blood Derived Normal C3N-01212-71 -C3N-01212.WXS.T C3N-01212 UCEC WXS tumor CPT0075380009 CPT0075380009.WholeExome.RP-1303.bam 27612818064 BAM NA b9c5038e-63ba-4d53-8634-720518abd60b e2c619f3f1dc43ec7d87aa9b65f9c753 hg19 Primary Tumor C3N-01212-03 -C3N-01212.WXS.T.hg38 C3N-01212 UCEC WXS tumor CPT0075380009 26e50c35-a756-496a-a377-639add0619ee_gdc_realn.bam 38297079719 BAM NA 9f929c14-586e-40d7-842c-7fcd83434081 e9cd1f247877cb213c804e2a34d4650c hg38 Primary Tumor C3N-01212-03 +C3N-01212.WGS.N.UNK_kl2xzN C3N-01212 UCEC WGS blood_normal CPT0075440002 CPT0075440002.WholeGenome.RP-1303.bam 65852195825 BAM NA f94f0c39-afc8-44c9-b319-3b81d96c3100 0cb251d3fba8d7fed71d9b20c31ac67a hg19 Blood Derived Normal C3N-01212-71 sample_tag=UNK_kl2xzN The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-01212.WGS.N.UNK_kl2xzN.hg38 C3N-01212 UCEC WGS blood_normal CPT0075440002 de27373b-d06d-4246-bfbd-1fb88cc0f8fd_gdc_realn.bam 98497925335 BAM NA 4bc8e960-760d-4cf1-b6b3-b52374645e4f b951f08d59b9aba9c90b64590d030344 hg38 Blood Derived Normal C3N-01212-71 sample_tag=UNK_kl2xzN The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-01212.WGS.T.UNK_rv8PQk C3N-01212 UCEC WGS tumor CPT0075380009 CPT0075380009.WholeGenome.RP-1303.bam 69308469108 BAM NA 6dd3d8c6-5562-4319-8c95-1c73871961e8 dd8d6e81a28d2902e80709b4e82e62ac hg19 Primary Tumor C3N-01212-03 sample_tag=UNK_rv8PQk The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-01212.WGS.T.UNK_rv8PQk.hg38 C3N-01212 UCEC WGS tumor CPT0075380009 26e50c35-a756-496a-a377-639add0619ee_gdc_realn.bam 103288384141 BAM NA aaddc8fa-2b31-41ff-8cbe-468c88441734 235b55651eab869a64c0cfaf70332c77 hg38 Primary Tumor C3N-01212-03 sample_tag=UNK_rv8PQk The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-01212.WXS.N.UNK_kl2xzN C3N-01212 UCEC WXS blood_normal CPT0075440002 CPT0075440002.WholeExome.RP-1303.bam 35903328030 BAM NA 64fc0220-163a-4cfe-b176-8a23a2bd8880 702c181994420b5f211c93ca76800a06 hg19 Blood Derived Normal C3N-01212-71 sample_tag=UNK_kl2xzN The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-01212.WXS.N.UNK_kl2xzN.hg38 C3N-01212 UCEC WXS blood_normal CPT0075440002 de27373b-d06d-4246-bfbd-1fb88cc0f8fd_gdc_realn.bam 48337338396 BAM NA 09d74eea-1860-4270-85dc-ce5bebbf6577 36eede3c7048b55b0859d19e84740e68 hg38 Blood Derived Normal C3N-01212-71 sample_tag=UNK_kl2xzN The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-01212.WXS.T.UNK_rv8PQk C3N-01212 UCEC WXS tumor CPT0075380009 CPT0075380009.WholeExome.RP-1303.bam 27612818064 BAM NA b9c5038e-63ba-4d53-8634-720518abd60b e2c619f3f1dc43ec7d87aa9b65f9c753 hg19 Primary Tumor C3N-01212-03 sample_tag=UNK_rv8PQk The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-01212.WXS.T.UNK_rv8PQk.hg38 C3N-01212 UCEC WXS tumor CPT0075380009 26e50c35-a756-496a-a377-639add0619ee_gdc_realn.bam 38297079719 BAM NA 9f929c14-586e-40d7-842c-7fcd83434081 e9cd1f247877cb213c804e2a34d4650c hg38 Primary Tumor C3N-01212-03 sample_tag=UNK_rv8PQk The WGS data for this aliquot failed the GDC harmonization pipeline. C3N-01213.MethArray.Green.T C3N-01213 CCRCC Methylation Array tumor CPT0075720009 202178770111_R07C01_Grn.idat 13676231 IDAT Green c2235d2d-3d39-4258-a055-5fd34bcc937c 3236dcf3a5eb65554e6ef290a1203103 NA Primary Tumor C3N-01213-01 C3N-01213.MethArray.Red.T C3N-01213 CCRCC Methylation Array tumor CPT0075720009 202178770111_R07C01_Red.idat 13676231 IDAT Red 2c4e9380-0a45-4dc6-bee6-7268cffa5f12 3ed183816d553fdd668e3311542d1ff5 NA Primary Tumor C3N-01213-01 C3N-01213.miRNA-Seq.T C3N-01213 CCRCC miRNA-Seq tumor CPT0075720006 181012_UNC32-K00270_0124_AH223CBBXY_CCGTCC_S37_L007_R1_001.unaln.bam 251502869 BAM NA a965c462-1a8e-47a5-974b-c369f5d555b3 6e99e065652062a736c6c8b2eff9a990 NA Primary Tumor C3N-01213-01 @@ -26904,6 +26136,8 @@ C3N-01270.RNA-Seq.genomic.T.hg38 C3N-01270 CCRCC RNA-Seq tumor CPT0379980006 ee9 C3N-01270.RNA-Seq.R1.T C3N-01270 CCRCC RNA-Seq tumor CPT0379980006 210105_UNC32-K00270_0269_BHKN5MBBXY_AAGTCCAA-TATGAGTA_S29_L008_R1_001.fastq.gz 4022165445 FASTQ NA 0898addb-d937-47ec-a08c-254a9b47aac1 3ef09fe088d58613b521a590d996a9c3 NA Primary Tumor C3N-01270-02 C3N-01270.RNA-Seq.R2.T C3N-01270 CCRCC RNA-Seq tumor CPT0379980006 210105_UNC32-K00270_0269_BHKN5MBBXY_AAGTCCAA-TATGAGTA_S29_L008_R2_001.fastq.gz 4643494347 FASTQ NA daca7c43-c7a1-490b-a280-1fa6dae51b2e 5b18e29be0dd5c3f2d23c32d6367c7ab NA Primary Tumor C3N-01270-02 C3N-01270.RNA-Seq.transcriptome.T.hg38 C3N-01270 CCRCC RNA-Seq tumor CPT0379980006 ee939d20-6e85-4f45-9fd4-49669e1222d4.rna_seq.transcriptome.gdc_realn.bam 10362064235 BAM transcriptome d1b4b2cd-4c9d-4778-9777-b82e57dfe90a b42041bf0cbc6fa422d62a5265a88d94 hg38 Primary Tumor C3N-01270-02 +C3N-01270.scRNA-Seq.R1.T C3N-01270 CCRCC scRNA-Seq tumor CPT0379980004 20220127_WUSTL_TWFU-CPT0379980004-Y1N1Z1_1Bn1_1_TCCGGGACAA+GTGAATGCCA_S1_L002_R1_001.fastq.gz 4608609131 FASTQ NA de277094-9027-46dc-b4f8-0c935f517427 dbe5a86ba6a176c1fa475d4ba536c698 NA Primary Tumor C3N-01270-02 +C3N-01270.scRNA-Seq.R2.T C3N-01270 CCRCC scRNA-Seq tumor CPT0379980004 20220127_WUSTL_TWFU-CPT0379980004-Y1N1Z1_1Bn1_1_TCCGGGACAA+GTGAATGCCA_S1_L002_R2_001.fastq.gz 16230272129 FASTQ NA c4c1da37-4642-4601-88f7-45528d058db5 c09633ed95e48f203e1d920fc76a06af NA Primary Tumor C3N-01270-02 C3N-01270.WGS.N C3N-01270 CCRCC WGS blood_normal CPT0380060002 CPT0380060002.WholeGenome.RP-2158.bam 23683580215 BAM NA 9326b369-e74e-48a7-8c40-cf479097394f f0c95aae9082650ec6cd91b4ebc44605 hg19 Blood Derived Normal C3N-01270-31 C3N-01270.WGS.N.hg38 C3N-01270 CCRCC WGS blood_normal CPT0380060002 a28bbf6b-2874-4a64-b595-677c311757ec_wgs_gdc_realn.bam 72517616586 BAM NA 22bc60dc-186d-4097-bd75-e17b16c2f828 a8b363391d2fe11bc2b4f3b23b9c8091 hg38 Blood Derived Normal C3N-01270-31 C3N-01270.WGS.T C3N-01270 CCRCC WGS tumor CPT0379980009 CPT0379980009.WholeGenome.RP-2158.bam 34128078847 BAM NA ba70be97-27d2-4442-b1e5-02f7072934e3 762c2abc06bd786eda98440fa382b119 hg19 Primary Tumor C3N-01270-02 @@ -27076,8 +26310,6 @@ C3N-01342.WXS.N C3N-01342 UCEC WXS blood_normal CPT0088170002 CPT0088170002.Whol C3N-01342.WXS.N.hg38 C3N-01342 UCEC WXS blood_normal CPT0088170002 34c0a262-8e89-4e5a-9b3f-562178463514_gdc_realn.bam 37451859794 BAM NA caced7d4-d5ac-4b37-bc8f-3576554ac0fc 43d937adc213d0e653339e7fff6fe3b4 hg38 Blood Derived Normal C3N-01342-31 C3N-01342.WXS.T C3N-01342 UCEC WXS tumor CPT0088140009 CPT0088140009.WholeExome.RP-1303.bam 25946783357 BAM NA dfcbb888-875c-4c1b-9a57-822338abc392 1592f5d5e538916790fdb3ee129211ff hg19 Primary Tumor C3N-01342-02 C3N-01342.WXS.T.hg38 C3N-01342 UCEC WXS tumor CPT0088140009 76064c3b-7b99-4673-827f-1ac70735b23c_gdc_realn.bam 36017580837 BAM NA eaaa9752-8535-40b0-8836-6774cdaaae9b db8b521ed808fd88d277b3843b7e7e9f hg38 Primary Tumor C3N-01342-02 -C3N-01343.MethArray.Green.T C3N-01343 UCEC Methylation Array tumor CPT0095310009 202234380062_R05C01_Grn.idat 13676231 IDAT Green ff617483-46c4-412c-992f-5f54fd5df55a 2dfcb6ad27e507eab47e002e7962db98 NA Primary Tumor C3N-01343-01 -C3N-01343.MethArray.Red.T C3N-01343 UCEC Methylation Array tumor CPT0095310009 202234380062_R05C01_Red.idat 13676231 IDAT Red bc5a9a38-50e8-4026-a188-a6f26b714a50 3850684cf6a14242733a15133d559c32 NA Primary Tumor C3N-01343-01 C3N-01344.MethArray.Green.T C3N-01344 UCEC Methylation Array tumor CPT0116340007 203219760065_R02C01_Grn.idat 13676230 IDAT Green b21c5460-73e4-4572-a27c-12f11604fad9 4927ee7eda04745c87661402cf627fa6 NA Primary Tumor C3N-01344-01,C3N-01344-03 C3N-01344.MethArray.Red.T C3N-01344 UCEC Methylation Array tumor CPT0116340007 203219760065_R02C01_Red.idat 13676230 IDAT Red d86cb728-8ad6-48ea-98f1-3f2b51a4cb96 87361e9a0c550605a04a767b36fc02ea NA Primary Tumor C3N-01344-01,C3N-01344-03 C3N-01344.miRNA-Seq.A C3N-01344 UCEC miRNA-Seq tissue_normal CPT0116450009 190130_UNC31-K00269_0188_BH2FGCBBXY_TATAAT_S44_L003_R1_001.unaln.bam 172288623 BAM NA 038f2766-5102-43c7-b34a-6ea50e549931 4b7cb79a7dd3ffe5142bab7c1affe543 NA Solid Tissue Normal C3N-01344-02 @@ -28115,34 +27347,6 @@ C3N-01522.WXS.T.HET_rvWNjw.hg38 C3N-01522 CCRCC WXS tumor CPT0077130009 3e70ad98 C3N-01522.WXS.T.HET_rvWV16 C3N-01522 CCRCC WXS tumor CPT0077120009 CPT0077120009.WholeExome.RP-1303.bam 18984065266 BAM NA d462bdc3-8afe-441d-b985-1c50c162571b b6e4b18faf8a6aae0f682620fedd4bcf hg19 Primary Tumor C3N-01522-02 sample_tag=HET_rvWV16 Duplicate item: CCRCC Tumor heterogeneity study aliquot C3N-01522.WXS.T.HET_rvWV16.hg38 C3N-01522 CCRCC WXS tumor CPT0077120009 f6fea3d8-c415-4e0d-a215-91be2d9a458a_wxs_gdc_realn.bam 25850689708 BAM NA a9ff1801-fb91-42cf-a890-c7fe7ff2755c 667acd3ce039e261d56b666157dca2ab hg38 Primary Tumor C3N-01522-02 sample_tag=HET_rvWV16 Duplicate item: CCRCC Tumor heterogeneity study aliquot C3N-01522.WXS.T.hg38 C3N-01522 CCRCC WXS tumor CPT0077110009 c4027887-51e8-40b2-956a-ba6daf3ee157_gdc_realn.bam 44643903219 BAM NA c5bffbd5-ed94-4032-ae1b-e15439ccb39f 6d98bce6d0d1e9cad0732cec826ef27e hg38 Primary Tumor C3N-01522-01 -C3N-01523.MethArray.Green.T C3N-01523 SAR Methylation Array tumor CPT0095740009 202234370086_R06C01_Grn.idat 13676231 IDAT Green a1d3668e-c820-4d54-8dff-cd71a1ac9700 6b2dc2e779d04b1215108a507af75eab NA Primary Tumor C3N-01523-02 -C3N-01523.MethArray.Red.T C3N-01523 SAR Methylation Array tumor CPT0095740009 202234370086_R06C01_Red.idat 13676231 IDAT Red 654554e7-4da4-4457-94bb-f164fd04736e df2ec1e4cb36cc539d3b739b9de69af8 NA Primary Tumor C3N-01523-02 -C3N-01523.miRNA-Seq.A C3N-01523 SAR miRNA-Seq tissue_normal CPT0095760006 181113_UNC31-K00269_0164_AH23NNBBXY_ATCACG_S25_L006_R1_001.unaln.bam 196554522 BAM NA d3792700-086c-49fa-a8a5-8534449c323e 941f85d29adca0d2eb5e08f1d9437e01 NA Solid Tissue Normal C3N-01523-06 -C3N-01523.miRNA-Seq.A.hg38 C3N-01523 SAR miRNA-Seq tissue_normal CPT0095760006 2473d0c7-9b90-413b-a5c7-ea65148cd3cb_mirnaseq_gdc_realn.bam 221770897 BAM NA 22d799aa-84a3-4454-9180-f75961d8126d 9987b9008485c12c575ba3899cde81fd hg38 Solid Tissue Normal C3N-01523-06 -C3N-01523.miRNA-Seq.T C3N-01523 SAR miRNA-Seq tumor CPT0095740006 181108_UNC31-K00269_0163_BH23TVBBXY_GTGGCC_S20_L008_R1_001.unaln.bam 221492355 BAM NA cdd15f53-4d3a-41ba-b2dd-46716f3c21e4 9de88f4359e2ca94d0a7b2f6b08bc148 NA Primary Tumor C3N-01523-02 -C3N-01523.miRNA-Seq.T.hg38 C3N-01523 SAR miRNA-Seq tumor CPT0095740006 b1984904-b807-4af4-856d-d2ffa0bfda0f_mirnaseq_gdc_realn.bam 248923825 BAM NA 72013b6d-fd07-4ce7-8a77-6d70b9a1fa9d 33c79d86ebc1594251e65443d073b5fc hg38 Primary Tumor C3N-01523-02 -C3N-01523.RNA-Seq.chimeric.A.hg38 C3N-01523 SAR RNA-Seq tissue_normal CPT0095760006 ff6be67d-d136-43aa-b052-da9b76374919.rna_seq.chimeric.gdc_realn.bam 27362979 BAM chimeric 44427415-091d-46de-9e16-2767d6768934 ef07712592c905586728f036137b2d68 hg38 Solid Tissue Normal C3N-01523-06 -C3N-01523.RNA-Seq.chimeric.T.hg38 C3N-01523 SAR RNA-Seq tumor CPT0095740006 4dc0bc22-4242-4a64-a359-39645127d4f6.rna_seq.chimeric.gdc_realn.bam 79690189 BAM chimeric b56011f2-d91d-4dd5-852c-489e52879bb8 4482048cadc1408453d8a28e6e592f99 hg38 Primary Tumor C3N-01523-02 -C3N-01523.RNA-Seq.genomic.A.hg38 C3N-01523 SAR RNA-Seq tissue_normal CPT0095760006 ff6be67d-d136-43aa-b052-da9b76374919.rna_seq.genomic.gdc_realn.bam 8388653036 BAM genomic a5b97010-fd5c-468b-80d4-8e939aa85900 80bd7049086cbc688cb509ad54d560eb hg38 Solid Tissue Normal C3N-01523-06 -C3N-01523.RNA-Seq.genomic.T.hg38 C3N-01523 SAR RNA-Seq tumor CPT0095740006 4dc0bc22-4242-4a64-a359-39645127d4f6.rna_seq.genomic.gdc_realn.bam 8979440877 BAM genomic 0b49b2e7-4220-4e43-a19c-c8577612bfd9 b8f1707afc1e7700c07760eb8682b333 hg38 Primary Tumor C3N-01523-02 -C3N-01523.RNA-Seq.R1.A C3N-01523 SAR RNA-Seq tissue_normal CPT0095760006 180516_UNC32-K00270_0095_AHTY5LBBXX_ATCACG_S3_L007_R1_001.fastq.gz 4358228819 FASTQ NA bde9e916-cb9f-4090-a499-3f88f84817e5 da56d264632928ec6bff87d7b552b522 NA Solid Tissue Normal C3N-01523-06 -C3N-01523.RNA-Seq.R1.T C3N-01523 SAR RNA-Seq tumor CPT0095740006 171107_UNC32-K00270_0063_BHLNTCBBXX_CGATGT_S64_L008_R1_001.fastq.gz 4124394565 FASTQ NA 20b7b2db-8294-42c0-bb2d-fde19e2c79d4 17f6ade4e08dcfa0eecca57b79820256 NA Primary Tumor C3N-01523-02 -C3N-01523.RNA-Seq.R2.A C3N-01523 SAR RNA-Seq tissue_normal CPT0095760006 180516_UNC32-K00270_0095_AHTY5LBBXX_ATCACG_S3_L007_R2_001.fastq.gz 4206500430 FASTQ NA c1a28fb3-c7fa-4949-bff0-b4d6684f62e2 4cd1af0c1f9eec13924eafd602a11d29 NA Solid Tissue Normal C3N-01523-06 -C3N-01523.RNA-Seq.R2.T C3N-01523 SAR RNA-Seq tumor CPT0095740006 171107_UNC32-K00270_0063_BHLNTCBBXX_CGATGT_S64_L008_R2_001.fastq.gz 4474140736 FASTQ NA 6f7ad0ef-7db7-4825-90ac-57e458fc783e 682594a1055d78e64e9946f8e461c5f9 NA Primary Tumor C3N-01523-02 -C3N-01523.RNA-Seq.transcriptome.A.hg38 C3N-01523 SAR RNA-Seq tissue_normal CPT0095760006 ff6be67d-d136-43aa-b052-da9b76374919.rna_seq.transcriptome.gdc_realn.bam 16928553884 BAM transcriptome fd7100da-3eeb-4ff2-a8f6-b9bfb1f7bba6 68874b3ef8ab09c320ac65e05ac994a0 hg38 Solid Tissue Normal C3N-01523-06 -C3N-01523.RNA-Seq.transcriptome.T.hg38 C3N-01523 SAR RNA-Seq tumor CPT0095740006 4dc0bc22-4242-4a64-a359-39645127d4f6.rna_seq.transcriptome.gdc_realn.bam 13030933055 BAM transcriptome 9dbaabec-583a-4858-b2bd-257a1b6edb54 b2dbcdc9fbac2bfe34050bd23a198d44 hg38 Primary Tumor C3N-01523-02 -C3N-01523.WGS.A C3N-01523 SAR WGS tissue_normal CPT0095760008 CPT0095760008.WholeGenome.RP-1303.bam 57315770873 BAM NA 4698d06f-900a-46ac-97e6-76cfc45d5b31 d46f1207571fbe86bb75375e9a742583 hg19 Solid Tissue Normal C3N-01523-06 -C3N-01523.WGS.A.hg38 C3N-01523 SAR WGS tissue_normal CPT0095760008 d08df0f0-791a-484a-9244-563c1fb0021e_wgs_gdc_realn.bam 84130701357 BAM NA afaab460-ef3d-4a9f-b991-d796d211c969 b1d8d4a4b9236e7eefe344412378ba5b hg38 Solid Tissue Normal C3N-01523-06 -C3N-01523.WGS.N C3N-01523 SAR WGS blood_normal CPT0095770002 CPT0095770002.WholeGenome.RP-1303.bam 61005962735 BAM NA 1abf660c-91cc-4347-b168-6ace5f04e6f7 7a7968fdc702f864558beecd9cb1377b hg19 Blood Derived Normal C3N-01523-31,C3N-01523-71 -C3N-01523.WGS.N.hg38 C3N-01523 SAR WGS blood_normal CPT0095770002 5dccfef0-13b7-4274-a12e-70ca005b5e92_wgs_gdc_realn.bam 90235549523 BAM NA 859e92b5-afec-4658-8332-a6fcd2c8a9d8 6cff01da777e2c5e2f35baceabaf89e4 hg38 Blood Derived Normal C3N-01523-31,C3N-01523-71 -C3N-01523.WGS.T C3N-01523 SAR WGS tumor CPT0095740009 CPT0095740009.WholeGenome.RP-1303.bam 64007133132 BAM NA 3e367205-18b8-452a-acce-5a4d388d6a38 6756971609d12db471e77c36421a68f8 hg19 Primary Tumor C3N-01523-02 -C3N-01523.WGS.T.hg38 C3N-01523 SAR WGS tumor CPT0095740009 0be446b5-e944-4c39-aa57-49c717dc97f8_wgs_gdc_realn.bam 94971180647 BAM NA dc8b8da1-6e99-4db7-82a8-0a23ff490bdd 2c05606c5dc674e2b38c548ad8d4ac4d hg38 Primary Tumor C3N-01523-02 -C3N-01523.WXS.A C3N-01523 SAR WXS tissue_normal CPT0095760008 CPT0095760008.WholeExome.RP-1303.bam 29939157560 BAM NA 771eba34-fa84-4b50-8b7e-34723fef9bc7 79246b0dd04922e2226ac9dd488d2fb5 hg19 Solid Tissue Normal C3N-01523-06 -C3N-01523.WXS.A.hg38 C3N-01523 SAR WXS tissue_normal CPT0095760008 d08df0f0-791a-484a-9244-563c1fb0021e_wxs_gdc_realn.bam 39861293285 BAM NA 2af69650-6597-4639-9220-a03f1e05f701 653dbccb1ceaaec0d72e6e810d624010 hg38 Solid Tissue Normal C3N-01523-06 -C3N-01523.WXS.N C3N-01523 SAR WXS blood_normal CPT0095770002 CPT0095770002.WholeExome.RP-1303.bam 60147285312 BAM NA 47e8204b-934f-4606-bd86-67bcd313829f 9aabb2a8d9bdcb91137fb764db6edd4b hg19 Blood Derived Normal C3N-01523-31,C3N-01523-71 -C3N-01523.WXS.N.hg38 C3N-01523 SAR WXS blood_normal CPT0095770002 5dccfef0-13b7-4274-a12e-70ca005b5e92_wxs_gdc_realn.bam 80881523288 BAM NA 484d7e63-f4ce-436d-95c4-d3c3aefd31c5 91e5c6401c3f51571cd6d60e70690c98 hg38 Blood Derived Normal C3N-01523-31,C3N-01523-71 -C3N-01523.WXS.T C3N-01523 SAR WXS tumor CPT0095740009 CPT0095740009.WholeExome.RP-1303.bam 41145241833 BAM NA 51776f6d-bad1-4a56-8382-d0a3f7ab0efd c17396873cb8996debc3a6600a0fd0bd hg19 Primary Tumor C3N-01523-02 -C3N-01523.WXS.T.hg38 C3N-01523 SAR WXS tumor CPT0095740009 0be446b5-e944-4c39-aa57-49c717dc97f8_wxs_gdc_realn.bam 56285062899 BAM NA f15bccc4-fae2-453e-8f7c-e0a96c700826 b4b99a5bbbeb44b4455c5384856ac1ea hg38 Primary Tumor C3N-01523-02 C3N-01524.MethArray.Green.A C3N-01524 CCRCC Methylation Array tissue_normal CPT0077320009 204930640120_R05C01_Grn.idat 13677885 IDAT Green cbe081bf-9453-429b-92fc-2e3d091937f2 4b431d8e7ed7b9e49886199901d3689a NA Solid Tissue Normal C3N-01524-06 C3N-01524.MethArray.Green.T C3N-01524 CCRCC Methylation Array tumor CPT0077310009 202178770008_R03C01_Grn.idat 13676231 IDAT Green 0528194a-e0c1-4d0f-86a5-ad77173dc2a1 6c8ac35343d33a2793e0c598a56ece25 NA Primary Tumor C3N-01524-03 C3N-01524.MethArray.Green.T.HET_rvrNDp C3N-01524 CCRCC Methylation Array tumor CPT0077300009 204367470157_R02C01_Grn.idat 13677880 IDAT Green 333cf649-8535-4381-964b-a81298f7ed69 d9d84b98733872e1b4492028e3ec3e6e NA Primary Tumor C3N-01524-02 sample_tag=HET_rvrNDp Duplicate item: CCRCC Tumor heterogeneity study aliquot @@ -28338,51 +27542,6 @@ C3N-01529.WXS.N C3N-01529 UCEC WXS blood_normal CPT0097470002 CPT0097470002.Whol C3N-01529.WXS.N.hg38 C3N-01529 UCEC WXS blood_normal CPT0097470002 2d6f437b-7532-4f34-85da-c400876414af_wxs_gdc_realn.bam 65690263407 BAM NA e98e0298-2b45-4c60-ae37-fd3d7b29a777 91d34bbae41f8c04d8441535098386a2 hg38 Blood Derived Normal C3N-01529-31,C3N-01529-71 C3N-01529.WXS.T C3N-01529 UCEC WXS tumor CPT0097440009 CPT0097440009.WholeExome.RP-1303.bam 41482211502 BAM NA 96fc723e-da7e-4360-9028-100cfbf9af6a 3d5104233cce6bb826b7871a556b2db2 hg19 Primary Tumor C3N-01529-02 C3N-01529.WXS.T.hg38 C3N-01529 UCEC WXS tumor CPT0097440009 f5ca6776-3248-415a-86d1-48ec87f211d6_wxs_gdc_realn.bam 56483401842 BAM NA 91cf1023-d004-44d3-9fde-b9a7615a8aa2 910ac656d80561865706663d20e8de37 hg38 Primary Tumor C3N-01529-02 -C3N-01532.MethArray.Green.T C3N-01532 SAR Methylation Array tumor CPT0096290009 202234370120_R03C01_Grn.idat 13676231 IDAT Green 43936646-c19b-4f6d-91dc-0b60f862323f 241b2afd16a0288bf899031e1fbcdd92 NA Primary Tumor C3N-01532-01 -C3N-01532.MethArray.Red.T C3N-01532 SAR Methylation Array tumor CPT0096290009 202234370120_R03C01_Red.idat 13676231 IDAT Red 019bf3b0-7559-46a0-a06d-73cf3b339fd1 2c49db943bfdaaaf0b99bf2811d1201e NA Primary Tumor C3N-01532-01 -C3N-01532.miRNA-Seq.T C3N-01532 SAR miRNA-Seq tumor CPT0096290013 181119_UNC31-K00269_0165_AH27WCBBXY_ACAGTG_S29_L003_R1_001.unaln.bam 189792569 BAM NA c3ea81f2-2d92-4754-aee5-82d14eb39607 2f8117506c0f5c3ad6b069a734bfeb84 NA Primary Tumor C3N-01532-01 -C3N-01532.miRNA-Seq.T.hg38 C3N-01532 SAR miRNA-Seq tumor CPT0096290013 44b7205e-de41-4d5c-9bc1-074e7638b5ea_mirnaseq_gdc_realn.bam 208732281 BAM NA 22d07cbd-bbaf-4db9-92ce-3b53d6bb2a64 603c2e82b23da3b11e4612580f2fa124 hg38 Primary Tumor C3N-01532-01 -C3N-01532.RNA-Seq.chimeric.T.hg38 C3N-01532 SAR RNA-Seq tumor CPT0096290013 2aba3316-8719-4943-af55-d8611a4af8b9.rna_seq.chimeric.gdc_realn.bam 159372713 BAM chimeric 1d011803-5a06-4427-80a0-2b9d7752684c 35e82b4d7ba97416224cff9be1551efe hg38 Primary Tumor C3N-01532-01 -C3N-01532.RNA-Seq.genomic.T.hg38 C3N-01532 SAR RNA-Seq tumor CPT0096290013 2aba3316-8719-4943-af55-d8611a4af8b9.rna_seq.genomic.gdc_realn.bam 8924997376 BAM genomic 8fec7615-0800-44a0-9871-6e370a19cc25 3c82db2547962a9eca2fb7b84c205eb8 hg38 Primary Tumor C3N-01532-01 -C3N-01532.RNA-Seq.R1.T C3N-01532 SAR RNA-Seq tumor CPT0096290013 171109_UNC31-K00269_0090_AHLHNWBBXX_ATCACG_S3_L001_R1_001.fastq.gz 4371557138 FASTQ NA cc55edee-92ec-491c-bdaa-e0d62437b499 97ecf2a7bc5f0f5c62276ca589cb23ad NA Primary Tumor C3N-01532-01 -C3N-01532.RNA-Seq.R2.T C3N-01532 SAR RNA-Seq tumor CPT0096290013 171109_UNC31-K00269_0090_AHLHNWBBXX_ATCACG_S3_L001_R2_001.fastq.gz 4239513080 FASTQ NA cb4f6c90-9ed4-48ce-a85c-f82c97084ead 0a51932c240c3ca4120acc96ddb5877f NA Primary Tumor C3N-01532-01 -C3N-01532.RNA-Seq.transcriptome.T.hg38 C3N-01532 SAR RNA-Seq tumor CPT0096290013 2aba3316-8719-4943-af55-d8611a4af8b9.rna_seq.transcriptome.gdc_realn.bam 10690636686 BAM transcriptome f1208840-98f8-4a25-8664-edb68bbd2b13 c520aec7873975772493b2b39ed32e9b hg38 Primary Tumor C3N-01532-01 -C3N-01532.WGS.N C3N-01532 SAR WGS blood_normal CPT0096330002 CPT0096330002.WholeGenome.RP-1303.bam 62565272534 BAM NA efa9b6c8-2643-4ac1-913e-b3a208ffc362 64bfb0cc8958d18eda6a208d851c8612 hg19 Blood Derived Normal C3N-01532-31,C3N-01532-71 -C3N-01532.WGS.N.hg38 C3N-01532 SAR WGS blood_normal CPT0096330002 083f7fee-1a89-45a7-a9d0-460aba205e4f_wgs_gdc_realn.bam 91032974534 BAM NA 0bcaa6b9-c880-420e-8014-0f37cea2e6c9 00d56126da353416cb4707a5a0e92877 hg38 Blood Derived Normal C3N-01532-31,C3N-01532-71 -C3N-01532.WGS.T C3N-01532 SAR WGS tumor CPT0096290009 CPT0096290009.WholeGenome.RP-1303.bam 67120378484 BAM NA 4de641a9-5522-4dd1-97e0-6ce4ee9788dd 0fca6a05b3d6fcf7a0f4076fc0d2aba5 hg19 Primary Tumor C3N-01532-01 -C3N-01532.WGS.T.hg38 C3N-01532 SAR WGS tumor CPT0096290009 eb75e846-c653-418e-a553-385daacea66e_wgs_gdc_realn.bam 98975714807 BAM NA bb019481-f65e-43a7-bbd0-91a2a5f56420 49c308ddbd89b86c3e6316cf72c60235 hg38 Primary Tumor C3N-01532-01 -C3N-01532.WXS.N C3N-01532 SAR WXS blood_normal CPT0096330002 CPT0096330002.WholeExome.RP-1303.bam 33430894839 BAM NA 6ea23524-e670-4df0-93b3-9c509ca23648 9c136d67b7820cbb2c172964461dbe34 hg19 Blood Derived Normal C3N-01532-31,C3N-01532-71 -C3N-01532.WXS.N.hg38 C3N-01532 SAR WXS blood_normal CPT0096330002 083f7fee-1a89-45a7-a9d0-460aba205e4f_wxs_gdc_realn.bam 46456951169 BAM NA 0385895d-d20d-4adb-b231-5e7943543946 4de3ce22d87a84ba4482f7ab948e9931 hg38 Blood Derived Normal C3N-01532-31,C3N-01532-71 -C3N-01532.WXS.T C3N-01532 SAR WXS tumor CPT0096290009 CPT0096290009.WholeExome.RP-1303.bam 36630210956 BAM NA 7162ae6d-779a-46e6-b493-01a22b77eb74 54132b121f45a010ce9db65e7444bc66 hg19 Primary Tumor C3N-01532-01 -C3N-01532.WXS.T.hg38 C3N-01532 SAR WXS tumor CPT0096290009 eb75e846-c653-418e-a553-385daacea66e_wxs_gdc_realn.bam 50860697190 BAM NA 2df77b85-abf5-4738-b11e-2c754ee1c658 a114a319d701b16ceef82e82264e688d hg38 Primary Tumor C3N-01532-01 -C3N-01534.MethArray.Green.T C3N-01534 SAR Methylation Array tumor CPT0096590009 202234370119_R03C01_Grn.idat 13676231 IDAT Green 4dd30c25-3ce0-4b9f-84e9-f0b61c235641 e6553ff205e7967c66f05cfae78c66b6 NA Primary Tumor C3N-01534-03 -C3N-01534.MethArray.Red.T C3N-01534 SAR Methylation Array tumor CPT0096590009 202234370119_R03C01_Red.idat 13676231 IDAT Red 6527a2a9-a4fb-4572-a724-dc5c7be0da1d 1876f35ddcc3170b4d1bd91761716dc0 NA Primary Tumor C3N-01534-03 -C3N-01534.miRNA-Seq.A C3N-01534 SAR miRNA-Seq tissue_normal CPT0096610006 181113_UNC31-K00269_0164_AH23NNBBXY_TTAGGC_S27_L006_R1_001.unaln.bam 219330073 BAM NA a723f2b2-6810-4cf7-a843-232213f738c7 b1e8965ed170e77c6726d37af9b24d9d NA Solid Tissue Normal C3N-01534-07 -C3N-01534.miRNA-Seq.A.hg38 C3N-01534 SAR miRNA-Seq tissue_normal CPT0096610006 71e950e9-42c8-46cf-be03-d84a3e7030c5_mirnaseq_gdc_realn.bam 240545489 BAM NA 579de783-2586-4dbc-a7c6-dab2f480d805 7d0b2ce88cab750e2ce6465f79e6792f hg38 Solid Tissue Normal C3N-01534-07 -C3N-01534.miRNA-Seq.T C3N-01534 SAR miRNA-Seq tumor CPT0096590013 181119_UNC31-K00269_0165_AH27WCBBXY_GCCAAT_S30_L003_R1_001.unaln.bam 255536194 BAM NA 5af5fe4b-59c7-4364-974b-1d0b4fd1389e 700559c67687bca0ec1dd26254ff73cd NA Primary Tumor C3N-01534-03 -C3N-01534.miRNA-Seq.T.hg38 C3N-01534 SAR miRNA-Seq tumor CPT0096590013 c9884293-886f-47ea-bb10-cdfa33a2821c_mirnaseq_gdc_realn.bam 285254121 BAM NA 7e3f0224-796b-4248-ba8e-d94bbbb2901f 2132034f5233a4635769a2f82ccf0dad hg38 Primary Tumor C3N-01534-03 -C3N-01534.RNA-Seq.chimeric.A.hg38 C3N-01534 SAR RNA-Seq tissue_normal CPT0096610006 452cf108-a9c5-48b6-9975-351b53499754.rna_seq.chimeric.gdc_realn.bam 44708766 BAM chimeric e1a7aa9c-85bc-4ad4-91b1-33776facf4b3 021d6ee94aa88a2edf44aa961d1ef783 hg38 Solid Tissue Normal C3N-01534-07 -C3N-01534.RNA-Seq.chimeric.T.hg38 C3N-01534 SAR RNA-Seq tumor CPT0096590013 67dc373a-e95c-4b8a-92fe-6be4fc752df1.rna_seq.chimeric.gdc_realn.bam 83231428 BAM chimeric b886f6d1-0939-4765-b2c7-dbc1e758178b c14eecfa3edfe59679750be3c41ae108 hg38 Primary Tumor C3N-01534-03 -C3N-01534.RNA-Seq.genomic.A.hg38 C3N-01534 SAR RNA-Seq tissue_normal CPT0096610006 452cf108-a9c5-48b6-9975-351b53499754.rna_seq.genomic.gdc_realn.bam 8688522210 BAM genomic ccbb1713-9e63-4eb9-aa30-2aef333b2926 dd0a6da91649bf6b4fdaa8e13e021a89 hg38 Solid Tissue Normal C3N-01534-07 -C3N-01534.RNA-Seq.genomic.T.hg38 C3N-01534 SAR RNA-Seq tumor CPT0096590013 67dc373a-e95c-4b8a-92fe-6be4fc752df1.rna_seq.genomic.gdc_realn.bam 11825228426 BAM genomic 4244b087-9602-49a0-9be7-fc348798d0da 666fa32dea23338945195ed596e78255 hg38 Primary Tumor C3N-01534-03 -C3N-01534.RNA-Seq.R1.A C3N-01534 SAR RNA-Seq tissue_normal CPT0096610006 180516_UNC32-K00270_0095_AHTY5LBBXX_TTAGGC_S1_L007_R1_001.fastq.gz 3705469415 FASTQ NA 985af42f-8f11-4137-a3e2-025dc6b3d73e a2ec5f9ca838c8954e51687afb6a3a60 NA Solid Tissue Normal C3N-01534-07 -C3N-01534.RNA-Seq.R1.T C3N-01534 SAR RNA-Seq tumor CPT0096590013 171109_UNC31-K00269_0090_AHLHNWBBXX_CGATGT_S2_L001_R1_001.fastq.gz 4314286589 FASTQ NA 947eb72e-02d2-405e-a678-dfc4e1a19555 77a7208840fe6e10f9533876ac4e8c5c NA Primary Tumor C3N-01534-03 -C3N-01534.RNA-Seq.R2.A C3N-01534 SAR RNA-Seq tissue_normal CPT0096610006 180516_UNC32-K00270_0095_AHTY5LBBXX_TTAGGC_S1_L007_R2_001.fastq.gz 4010604323 FASTQ NA 70037698-152a-49ac-900c-193b82c4feab 51ba3d3ea1adb2987d9ec12df2b6bec0 NA Solid Tissue Normal C3N-01534-07 -C3N-01534.RNA-Seq.R2.T C3N-01534 SAR RNA-Seq tumor CPT0096590013 171109_UNC31-K00269_0090_AHLHNWBBXX_CGATGT_S2_L001_R2_001.fastq.gz 4762718198 FASTQ NA 8f542b79-b329-4f48-8407-7c37543cd559 ab8251db34a9f80f3840b8241e160fec NA Primary Tumor C3N-01534-03 -C3N-01534.RNA-Seq.transcriptome.A.hg38 C3N-01534 SAR RNA-Seq tissue_normal CPT0096610006 452cf108-a9c5-48b6-9975-351b53499754.rna_seq.transcriptome.gdc_realn.bam 8984532268 BAM transcriptome e5b8b8b8-61dc-4b58-bb7d-663955b75011 b0fbecf3118de842a08932062fb0561c hg38 Solid Tissue Normal C3N-01534-07 -C3N-01534.RNA-Seq.transcriptome.T.hg38 C3N-01534 SAR RNA-Seq tumor CPT0096590013 67dc373a-e95c-4b8a-92fe-6be4fc752df1.rna_seq.transcriptome.gdc_realn.bam 10802264061 BAM transcriptome 0a9c0739-edd0-4ded-badf-c4a2add2ca53 dedc7080620a408c6fd3aeb548697f8f hg38 Primary Tumor C3N-01534-03 -C3N-01534.WGS.A C3N-01534 SAR WGS tissue_normal CPT0096610009 CPT0096610009.WholeGenome.RP-1303.bam 66335745490 BAM NA d5174d69-79ff-41ce-b237-bd4236ef3ba1 3f4aac0cb1396a1881d39f80e4d3f224 hg19 Solid Tissue Normal C3N-01534-07 -C3N-01534.WGS.A.hg38 C3N-01534 SAR WGS tissue_normal CPT0096610009 4c9eafb5-5626-4068-b6dd-b7037a72f9b3_wgs_gdc_realn.bam 96527083926 BAM NA 557be304-306b-4fb5-b24e-f6371a885438 06f376ddbfc2e530a13c0954f1439e1a hg38 Solid Tissue Normal C3N-01534-07 -C3N-01534.WGS.N C3N-01534 SAR WGS blood_normal CPT0096620002 CPT0096620002.WholeGenome.RP-1303.bam 64979091838 BAM NA b0c1ecdb-9f16-4076-bc11-07fa97c59788 8d68c168fbaa312faf27b52b8c601eae hg19 Blood Derived Normal C3N-01534-31,C3N-01534-71 -C3N-01534.WGS.N.hg38 C3N-01534 SAR WGS blood_normal CPT0096620002 31599a7a-89dd-46ca-a265-aded15f0b956_wgs_gdc_realn.bam 95986761019 BAM NA ab8f4d37-938d-4e69-8189-d667d5723906 d59dbc1ec972616250bd13a57e6a8ea6 hg38 Blood Derived Normal C3N-01534-31,C3N-01534-71 -C3N-01534.WGS.T C3N-01534 SAR WGS tumor CPT0096590009 CPT0096590009.WholeGenome.RP-1303.bam 67700961712 BAM NA c72cd635-c294-45b9-80f5-d13f84cd0f3e b9f30ebb0293eb38f8fa470db609433a hg19 Primary Tumor C3N-01534-03 -C3N-01534.WGS.T.hg38 C3N-01534 SAR WGS tumor CPT0096590009 813097a7-8792-4c43-aa91-8e2698028062_wgs_gdc_realn.bam 100002621609 BAM NA bea54d3a-167e-412f-a2c7-04aabbcba24a c5067cd6d513cf5fe0d049254c017cf5 hg38 Primary Tumor C3N-01534-03 -C3N-01534.WXS.A C3N-01534 SAR WXS tissue_normal CPT0096610009 CPT0096610009.WholeExome.RP-1303.bam 33193489218 BAM NA a41c5417-a7a2-4a95-a52f-9bbb65fd70bc f862cbfe0db1e3757983259649c963d1 hg19 Solid Tissue Normal C3N-01534-07 -C3N-01534.WXS.A.hg38 C3N-01534 SAR WXS tissue_normal CPT0096610009 4c9eafb5-5626-4068-b6dd-b7037a72f9b3_wxs_gdc_realn.bam 44622108751 BAM NA 5633b27c-bb5b-4bb8-b146-44c5496d4747 90aead943830fe04f5dccee8553a3f10 hg38 Solid Tissue Normal C3N-01534-07 -C3N-01534.WXS.N C3N-01534 SAR WXS blood_normal CPT0096620002 CPT0096620002.WholeExome.RP-1303.bam 28281103228 BAM NA 64880747-e437-4cc2-9b64-f08996381cc4 31d260e877c456f89c43b028b3dbd98a hg19 Blood Derived Normal C3N-01534-31,C3N-01534-71 -C3N-01534.WXS.N.hg38 C3N-01534 SAR WXS blood_normal CPT0096620002 31599a7a-89dd-46ca-a265-aded15f0b956_wxs_gdc_realn.bam 37867120701 BAM NA 36cfb374-2526-41bf-bea4-8f3a5fc3556a 90da8ec34f37eba3b1253d7ced6fac37 hg38 Blood Derived Normal C3N-01534-31,C3N-01534-71 -C3N-01534.WXS.T C3N-01534 SAR WXS tumor CPT0096590009 CPT0096590009.WholeExome.RP-1303.bam 38422354650 BAM NA e0126368-4444-4fb6-86c9-ce783c430a1b b2737bc46fbf43cbd067673255d93c4c hg19 Primary Tumor C3N-01534-03 -C3N-01534.WXS.T.hg38 C3N-01534 SAR WXS tumor CPT0096590009 813097a7-8792-4c43-aa91-8e2698028062_wxs_gdc_realn.bam 52762096430 BAM NA 8f3ae32d-3510-42ae-ac5b-04cc0ed7783a c8eaa842a50289509ffedc9453032650 hg38 Primary Tumor C3N-01534-03 C3N-01535.MethArray.Green.T C3N-01535 SAR Methylation Array tumor CPT0096740009 202234380069_R03C01_Grn.idat 13676246 IDAT Green 0ba9a00a-a40b-4d19-9761-d7b04c1eb048 f9bb50c3dc006bb73a4a1412437b1eac NA Primary Tumor C3N-01535-02 C3N-01535.MethArray.Red.T C3N-01535 SAR Methylation Array tumor CPT0096740009 202234380069_R03C01_Red.idat 13676246 IDAT Red 09829546-1d49-40a9-8115-81c5a5d8ae28 981d9abd3b3b0b20788f8c080ee470f4 NA Primary Tumor C3N-01535-02 C3N-01535.miRNA-Seq.A C3N-01535 SAR miRNA-Seq tissue_normal CPT0096760013 181119_UNC31-K00269_0165_AH27WCBBXY_CGTACG_S46_L002_R1_001.unaln.bam 225624841 BAM NA 8b8b9381-56f9-4caf-962a-43dd16dde57c 619564677a70ac3ddac0699061fb0a3b NA Solid Tissue Normal C3N-01535-06 @@ -29479,23 +28638,6 @@ C3N-01818.WXS.N C3N-01818 GBM WXS blood_normal CPT0168320002 CPT0168320002.Whole C3N-01818.WXS.N.hg38 C3N-01818 GBM WXS blood_normal CPT0168320002 bd504223-27b1-4c70-af68-6985b7e5d23b_wxs_gdc_realn.bam 48343240872 BAM NA f233f5da-c7e9-45e8-9c93-bd18b618d4b9 24627a93091899749976428980e36982 hg38 Blood Derived Normal C3N-01818-71 C3N-01818.WXS.T C3N-01818 GBM WXS tumor CPT0168270006 CPT0168270006.WholeExome.RP-1303.bam 31671952321 BAM NA f14f1716-e463-4ca3-99ec-e3f2bef9c83f c6023b74eefda700bb08b3426a254c7e hg19 Primary Tumor C3N-01818-02 C3N-01818.WXS.T.hg38 C3N-01818 GBM WXS tumor CPT0168270006 f9340864-be80-405e-a3a3-e0b123762976_wxs_gdc_realn.bam 42399077248 BAM NA 4da3c9fd-7357-4d0f-8d0c-10c9e67f06fc 1418d6dc5ebae3cb6f766ad5ea26e1a9 hg38 Primary Tumor C3N-01818-02 -C3N-01821.MethArray.Green.T C3N-01821 UCEC Methylation Array tumor CPT0133040011 203561620054_R03C01_Grn.idat 13676231 IDAT Green a06897b9-c62b-4134-8a20-e9bda43efda2 e43e46ba4c2d8236715620891ac4c6eb NA Primary Tumor C3N-01821-01 -C3N-01821.MethArray.Red.T C3N-01821 UCEC Methylation Array tumor CPT0133040011 203561620054_R03C01_Red.idat 13676231 IDAT Red e75b2039-41fc-4447-b96c-4b30113159c6 b5b04c6fa50e67a8f7500808f906a657 NA Primary Tumor C3N-01821-01 -C3N-01821.miRNA-Seq.T C3N-01821 UCEC miRNA-Seq tumor CPT0133040018 190508_UNC31-K00269_0215_BH7FYKBBXY_CTAGCT_S38_L004_R1_001.unaln.bam 235632427 BAM NA e63f3d02-498d-4d30-a011-af6ce6fbed4e db59d85ff58917c13f1cf1b27e12a93f NA Primary Tumor C3N-01821-01 -C3N-01821.miRNA-Seq.T.hg38 C3N-01821 UCEC miRNA-Seq tumor CPT0133040018 965474a9-0537-427a-ac19-670c7400bfe5_mirnaseq_gdc_realn.bam 263164994 BAM NA 88ea51e2-e176-42bf-bc8a-c0f1325688d8 5369a77e303864ca3b451ae2b0b75899 hg38 Primary Tumor C3N-01821-01 -C3N-01821.RNA-Seq.chimeric.T.hg38 C3N-01821 UCEC RNA-Seq tumor CPT0133040018 738f68cd-de21-4bd3-aead-fdd03c121858.rna_seq.chimeric.gdc_realn.bam 39122224 BAM chimeric 4247f7f0-ccee-4100-a945-b0498d6a5ead 47c92ec4cb7bd0d41b3de6fe68f13708 hg38 Primary Tumor C3N-01821-01 -C3N-01821.RNA-Seq.genomic.T.hg38 C3N-01821 UCEC RNA-Seq tumor CPT0133040018 738f68cd-de21-4bd3-aead-fdd03c121858.rna_seq.genomic.gdc_realn.bam 9267644613 BAM genomic fcedd8bd-9801-4c7b-a23f-8f8311ede3c8 8afe8c242964d41c1287afc7b03540bc hg38 Primary Tumor C3N-01821-01 -C3N-01821.RNA-Seq.R1.T C3N-01821 UCEC RNA-Seq tumor CPT0133040018 190523_UNC32-K00270_0176_BH7CW7BBXY_GAACCGCG-TGACCTTA_S2_L001_R1_001.fastq.gz 4480804902 FASTQ NA a42caea4-5690-4fe0-964d-404fa782f7e1 b686cec3430cfdc63aecad801a83164e NA Primary Tumor C3N-01821-01 -C3N-01821.RNA-Seq.R2.T C3N-01821 UCEC RNA-Seq tumor CPT0133040018 190523_UNC32-K00270_0176_BH7CW7BBXY_GAACCGCG-TGACCTTA_S2_L001_R2_001.fastq.gz 5117426385 FASTQ NA 4a51f5c6-21d6-4b8a-b9c8-1cf58c74ca75 4ebda1cba32a716d1c2e1b24426a505e NA Primary Tumor C3N-01821-01 -C3N-01821.RNA-Seq.transcriptome.T.hg38 C3N-01821 UCEC RNA-Seq tumor CPT0133040018 738f68cd-de21-4bd3-aead-fdd03c121858.rna_seq.transcriptome.gdc_realn.bam 10293151449 BAM transcriptome 99575805-4bf6-4fb3-9673-9b492fa2f3ac d2145a4e8d8f063f495ea572fed22ea3 hg38 Primary Tumor C3N-01821-01 -C3N-01821.WGS.N C3N-01821 UCEC WGS blood_normal CPT0133160002 CPT0133160002.WholeGenome.RP-1303.bam 59396703134 BAM NA c3adb271-1e68-4c33-b600-6d08e0861543 cd46aa413882ff8af9bbd6de2584cd39 hg19 Blood Derived Normal C3N-01821-71 -C3N-01821.WGS.N.hg38 C3N-01821 UCEC WGS blood_normal CPT0133160002 eef72e7e-aa67-428b-a43f-a7d6dd477c24_wgs_gdc_realn.bam 88495885754 BAM NA 65d9870e-b4d3-41dd-97ac-c15fb7282101 328e9e41a7bb850322216ace9d80a94d hg38 Blood Derived Normal C3N-01821-71 -C3N-01821.WGS.T C3N-01821 UCEC WGS tumor CPT0133040011 CPT0133040011.WholeGenome.RP-1303.bam 72027207330 BAM NA ef1b9927-d25b-440b-8cc8-a06424511608 94e51479f6908467b7b7881c34dfee52 hg19 Primary Tumor C3N-01821-01 -C3N-01821.WGS.T.hg38 C3N-01821 UCEC WGS tumor CPT0133040011 b6fa685c-2f54-4665-b7b2-2c9b9186db2c_wgs_gdc_realn.bam 107381829537 BAM NA 4adacc0c-cdeb-450a-9cfd-5958f5b76181 b8fdc17b46ed6f69aa6d1906ecd4f20f hg38 Primary Tumor C3N-01821-01 -C3N-01821.WXS.N C3N-01821 UCEC WXS blood_normal CPT0133160002 CPT0133160002.WholeExome.RP-1303.bam 29849196149 BAM NA 8170f806-da99-41bb-995c-4ec8c5dfd10d 38ce511defb0e9d39554851c9fe17c12 hg19 Blood Derived Normal C3N-01821-71 -C3N-01821.WXS.N.hg38 C3N-01821 UCEC WXS blood_normal CPT0133160002 eef72e7e-aa67-428b-a43f-a7d6dd477c24_wxs_gdc_realn.bam 40485169834 BAM NA 2f14427e-dbcf-4402-9995-ef9bf5cd5989 5d656828f9bdaf2784dddfc513054a39 hg38 Blood Derived Normal C3N-01821-71 -C3N-01821.WXS.T C3N-01821 UCEC WXS tumor CPT0133040011 CPT0133040011.WholeExome.RP-1303.bam 26820504055 BAM NA aff3eadc-39bd-4275-a730-27c77ef4e036 39a86479a8ee3ddcebf1a50d0e11e4f2 hg19 Primary Tumor C3N-01821-01 -C3N-01821.WXS.T.hg38 C3N-01821 UCEC WXS tumor CPT0133040011 b6fa685c-2f54-4665-b7b2-2c9b9186db2c_wxs_gdc_realn.bam 37768979843 BAM NA 5ccd6919-dfe3-4b41-b80b-629b1d91b264 86f0814b635b96a4ed581e308471e863 hg38 Primary Tumor C3N-01821-01 C3N-01823.MethArray.Green.A C3N-01823 LUAD Methylation Array tissue_normal CPT0097600009 203027390113_R05C01_Grn.idat 13676246 IDAT Green 509ee701-0c21-43df-91ae-639f9ac26949 83f25435b7efbfe27f65bc68ce1add51 NA Solid Tissue Normal C3N-01823-06 C3N-01823.MethArray.Green.T C3N-01823 LUAD Methylation Array tumor CPT0097580009 202234380099_R01C01_Grn.idat 13676231 IDAT Green a9d223e8-ecf4-4224-ada9-b997b22d90cd eafe63ef2855149f2a321b787bcec04a NA Primary Tumor C3N-01823-02 C3N-01823.MethArray.Red.A C3N-01823 LUAD Methylation Array tissue_normal CPT0097600009 203027390113_R05C01_Red.idat 13676246 IDAT Red 1d79c083-5d16-4660-8b42-091f086f9305 a0a890e789eed03f20b940d6e9ac679c NA Solid Tissue Normal C3N-01823-06 @@ -30330,6 +29472,10 @@ C3N-01904.RNA-Seq.genomic.T.hg38 C3N-01904 CCRCC RNA-Seq tumor CPT0381430006 1fb C3N-01904.RNA-Seq.R1.T C3N-01904 CCRCC RNA-Seq tumor CPT0381430006 210105_UNC32-K00270_0269_BHKN5MBBXY_CCAAGTCT-AAGGATGA_S22_L006_R1_001.fastq.gz 4529073333 FASTQ NA ec9c2f10-abe2-4e34-bf65-76b95f07e67e f4b84cfb872ede34f4387061aa9bbd06 NA Primary Tumor C3N-01904-02 C3N-01904.RNA-Seq.R2.T C3N-01904 CCRCC RNA-Seq tumor CPT0381430006 210105_UNC32-K00270_0269_BHKN5MBBXY_CCAAGTCT-AAGGATGA_S22_L006_R2_001.fastq.gz 5082428448 FASTQ NA 694c44c5-29b7-4a2a-8b2b-700c8423889a ca41e1baed9dc91fef25ae7ecb0852b3 NA Primary Tumor C3N-01904-02 C3N-01904.RNA-Seq.transcriptome.T.hg38 C3N-01904 CCRCC RNA-Seq tumor CPT0381430006 1fba9630-b04c-473d-b67d-213c07c8cbd9.rna_seq.transcriptome.gdc_realn.bam 10419516729 BAM transcriptome c8552959-fc50-4eeb-8eb4-e1e2163aab10 aa5821c8cca901359037fc66d60eb578 hg38 Primary Tumor C3N-01904-02 +C3N-01904.scRNA-Seq.R1.T C3N-01904 CCRCC scRNA-Seq tumor CPT0381430004 20220127_WUSTL_TWFU-CPT0381430004-Y1N1Z1_1Bn1_1_GCGCTTATGG+GCCTGGCTAG_S1_L003_R1_001.fastq.gz 3393258637 FASTQ NA db5021be-2fb9-440f-9bcb-96b441560db6 a5daa5f3cc87c4f262b9fdbecd646677 NA Primary Tumor C3N-01904-02 +C3N-01904.scRNA-Seq.R1.T C3N-01904 CCRCC scRNA-Seq tumor CPT0381430004 20220127_WUSTL_TWFU-CPT0381430004-Y1N1Z1_1Bn1_1_GCGCTTATGG+GCCTGGCTAG_S7_L003_R1_001.fastq.gz 1362438878 FASTQ NA d5fe73fc-ce4a-488b-89e7-b2ea51dcdae5 53e93c5f17f524f08b21c777f2c7a369 NA Primary Tumor C3N-01904-02 +C3N-01904.scRNA-Seq.R2.T C3N-01904 CCRCC scRNA-Seq tumor CPT0381430004 20220127_WUSTL_TWFU-CPT0381430004-Y1N1Z1_1Bn1_1_GCGCTTATGG+GCCTGGCTAG_S1_L003_R2_001.fastq.gz 11533282720 FASTQ NA 09eec294-123d-47d1-ae82-c74c3ca43090 b87d870bc8ff26929443304885f218cf NA Primary Tumor C3N-01904-02 +C3N-01904.scRNA-Seq.R2.T C3N-01904 CCRCC scRNA-Seq tumor CPT0381430004 20220127_WUSTL_TWFU-CPT0381430004-Y1N1Z1_1Bn1_1_GCGCTTATGG+GCCTGGCTAG_S7_L003_R2_001.fastq.gz 4656013216 FASTQ NA 1652c2d5-f51a-4417-bf60-baee3f910d80 bf787d1ff735a650adebbe726e1d7244 NA Primary Tumor C3N-01904-02 C3N-01904.WGS.N C3N-01904 CCRCC WGS blood_normal CPT0381540002 CPT0381540002.WholeGenome.RP-2158.bam 23456002017 BAM NA 0a3af977-8f35-4aa6-809e-597a8c3ab4d1 b6037a0462907211255b0345fc79b4e6 hg19 Blood Derived Normal C3N-01904-31 C3N-01904.WGS.N.hg38 C3N-01904 CCRCC WGS blood_normal CPT0381540002 fb97d04c-527d-425e-b8ca-4298ee511f02_wgs_gdc_realn.bam 69955597389 BAM NA e5dd6e78-21c1-4dc6-9b4f-fb7375528426 3b44678b00176e6ca31512ed5ac72ad1 hg38 Blood Derived Normal C3N-01904-31 C3N-01904.WGS.T C3N-01904 CCRCC WGS tumor CPT0381430009 CPT0381430009.WholeGenome.RP-2158.bam 22981681101 BAM NA 00a4c86d-df64-44ae-8c3f-dad499bb240b a032f4f710a33ecdfaee4de0b7142c62 hg19 Primary Tumor C3N-01904-02 @@ -30936,49 +30082,6 @@ C3N-02030.WXS.T.LMD_mvxPGp C3N-02030 UCEC WXS tumor CPT0133780092 CPT0133780092. C3N-02030.WXS.T.LMD_mvxPGp.hg38 C3N-02030 UCEC WXS tumor CPT0133780092 4811084b-1a9d-46c1-b3c9-702e65cbaf56_wxs_gdc_realn.bam 21424219326 BAM NA 61c562aa-afc1-4d23-8a43-1f4a1c236c05 7dbdba91e58f1c7c7bc06ce11c04a0f4 hg38 Primary Tumor C3N-02030-03 sample_tag=LMD_mvxPGp Duplicate item: UCEC LMD Heterogeneity Pilot C3N-02030.WXS.T.LMD_Y3LV4K C3N-02030 UCEC WXS tumor CPT0133760076 CPT0133760076.WholeExome.RP-1303.bam 29426464494 BAM NA 249d3a65-6ae3-4c88-a18e-574a63822f58 86764c18b30299620b9aefb171dbc1a7 hg19 Primary Tumor C3N-02030-01 sample_tag=LMD_Y3LV4K Duplicate item: UCEC LMD Heterogeneity Pilot C3N-02030.WXS.T.LMD_Y3LV4K.hg38 C3N-02030 UCEC WXS tumor CPT0133760076 0adb5230-01ea-46f3-8f0a-ae7d91d4c4e6_wxs_gdc_realn.bam 40589787215 BAM NA 80bde6d6-cd8c-460d-ad2a-59f25c126a84 6edb21ff636d719ebfad317acf5eaf06 hg38 Primary Tumor C3N-02030-01 sample_tag=LMD_Y3LV4K Duplicate item: UCEC LMD Heterogeneity Pilot -C3N-02034.MethArray.Green.T C3N-02034 SAR Methylation Array tumor CPT0099340009 202234380102_R07C01_Grn.idat 13676231 IDAT Green 5650da79-1595-4e52-95b5-12a583be3996 9ac482c1602c1783b3efa927d312cc43 NA Primary Tumor C3N-02034-02 -C3N-02034.MethArray.Red.T C3N-02034 SAR Methylation Array tumor CPT0099340009 202234380102_R07C01_Red.idat 13676231 IDAT Red 6487de03-233e-4220-8488-c1c6f7062b4c 34335e39527c3ff108d966b3e34a2aac NA Primary Tumor C3N-02034-02 -C3N-02034.miRNA-Seq.A C3N-02034 SAR miRNA-Seq tissue_normal CPT0099360009 181119_UNC31-K00269_0165_AH27WCBBXY_TAATCG_S18_L005_R1_001.unaln.bam 202668671 BAM NA 719d6c35-7cb2-4acf-8c46-19f603f60406 973dc3ea32df026d277fa7a1443bfcb9 NA Solid Tissue Normal C3N-02034-06 -C3N-02034.miRNA-Seq.A.hg38 C3N-02034 SAR miRNA-Seq tissue_normal CPT0099360009 519c3e7d-c63d-4475-ad45-b7c72f3682bf_mirnaseq_gdc_realn.bam 222959366 BAM NA c4da88d9-f1da-400d-a220-9fa002316079 3da01bd8b27a23d70c82d6bb2416161b hg38 Solid Tissue Normal C3N-02034-06 -C3N-02034.miRNA-Seq.T C3N-02034 SAR miRNA-Seq tumor CPT0099340006 181108_UNC31-K00269_0163_BH23TVBBXY_CAGGCG_S33_L007_R1_001.unaln.bam 346809672 BAM NA 759f554c-c8a6-4b8b-92a1-cd26fb235737 d6db2154d9a8bcebb73e0c2b514bacb3 NA Primary Tumor C3N-02034-02 -C3N-02034.miRNA-Seq.T.hg38 C3N-02034 SAR miRNA-Seq tumor CPT0099340006 437b6e53-e5a6-4784-935f-e51462fcfeb2_mirnaseq_gdc_realn.bam 373611203 BAM NA 730f8389-8847-4006-8c08-e36e2ba4ed58 ff7a86a76c905d142496de6894c8c3ca hg38 Primary Tumor C3N-02034-02 -C3N-02034.RNA-Seq.chimeric.A.hg38 C3N-02034 SAR RNA-Seq tissue_normal CPT0099360009 071531fe-d075-4fa1-bd82-9d2bfac112f7.rna_seq.chimeric.gdc_realn.bam 24450519 BAM chimeric d29893f7-1c3e-4a38-9421-a81d0d98e44b d39050ed48b371cdcd6fe452857c6e3e hg38 Solid Tissue Normal C3N-02034-06 -C3N-02034.RNA-Seq.chimeric.T.hg38 C3N-02034 SAR RNA-Seq tumor CPT0099340006 49b0a2fb-80da-4c66-82d7-273bd053d639.rna_seq.chimeric.gdc_realn.bam 67275323 BAM chimeric 5b158b09-0b6e-4626-adca-b65b7d217c65 d4bfc428d7cf00a00961e8075f738121 hg38 Primary Tumor C3N-02034-02 -C3N-02034.RNA-Seq.genomic.A.hg38 C3N-02034 SAR RNA-Seq tissue_normal CPT0099360009 071531fe-d075-4fa1-bd82-9d2bfac112f7.rna_seq.genomic.gdc_realn.bam 8208304746 BAM genomic d3a505de-ee3d-4538-afa5-b7f1235aca28 fad3733ff7de1f3da20f912de87b8b13 hg38 Solid Tissue Normal C3N-02034-06 -C3N-02034.RNA-Seq.genomic.T.hg38 C3N-02034 SAR RNA-Seq tumor CPT0099340006 49b0a2fb-80da-4c66-82d7-273bd053d639.rna_seq.genomic.gdc_realn.bam 8511766007 BAM genomic 22fa21a4-e30a-4757-9c99-af529c193b3f ab4bed5028a43b14f93be12f22ad117b hg38 Primary Tumor C3N-02034-02 -C3N-02034.RNA-Seq.R1.A C3N-02034 SAR RNA-Seq tissue_normal CPT0099360009 180606_UNC32-K00270_0097_AHVCKFBBXX_GTGAAA_S17_L005_R1_001.fastq.gz 3524946913 FASTQ NA 58df41de-ea69-44a2-9d24-28b670ee3e30 2d54a5dc3c93fd51a1a2dd342871fd21 NA Solid Tissue Normal C3N-02034-06 -C3N-02034.RNA-Seq.R1.T C3N-02034 SAR RNA-Seq tumor CPT0099340006 171107_UNC32-K00270_0063_BHLNTCBBXX_CCGTCC_S54_L005_R1_001.fastq.gz 3767460498 FASTQ NA 416ef6fe-0dae-4937-9867-23b7e2895363 46a78ef9751ecaf681aca0d113faafc9 NA Primary Tumor C3N-02034-02 -C3N-02034.RNA-Seq.R2.A C3N-02034 SAR RNA-Seq tissue_normal CPT0099360009 180606_UNC32-K00270_0097_AHVCKFBBXX_GTGAAA_S17_L005_R2_001.fastq.gz 3682534812 FASTQ NA 03dd9ef1-8992-4d46-94e4-877ea54cf506 486cf2f6797e28929fe9b0a939075358 NA Solid Tissue Normal C3N-02034-06 -C3N-02034.RNA-Seq.R2.T C3N-02034 SAR RNA-Seq tumor CPT0099340006 171107_UNC32-K00270_0063_BHLNTCBBXX_CCGTCC_S54_L005_R2_001.fastq.gz 4104499083 FASTQ NA 4fad0e61-0793-4f82-8dd0-df21ccdd4eab ebd249bf1427b4e2679723a4aaed95c3 NA Primary Tumor C3N-02034-02 -C3N-02034.RNA-Seq.transcriptome.A.hg38 C3N-02034 SAR RNA-Seq tissue_normal CPT0099360009 071531fe-d075-4fa1-bd82-9d2bfac112f7.rna_seq.transcriptome.gdc_realn.bam 8803727889 BAM transcriptome 10cdadf8-f0c1-448e-9657-bf75c2cc98e9 3699b83f3e9b8fe3436d7dcb3328a40d hg38 Solid Tissue Normal C3N-02034-06 -C3N-02034.RNA-Seq.transcriptome.T.hg38 C3N-02034 SAR RNA-Seq tumor CPT0099340006 49b0a2fb-80da-4c66-82d7-273bd053d639.rna_seq.transcriptome.gdc_realn.bam 9550168490 BAM transcriptome bae6c7fd-a463-4c6a-bd29-9707db424b2d 86bf47c50592231638a464f9e9ab7757 hg38 Primary Tumor C3N-02034-02 -C3N-02034.WGS.N C3N-02034 SAR WGS blood_normal CPT0099370002 CPT0099370002.WholeGenome.RP-1303.bam 57567660368 BAM NA ec6c1855-5dee-44d4-9f25-942a70d3c27e 7aef295a3686cdba11fbe44cefd5935a hg19 Blood Derived Normal C3N-02034-31,C3N-02034-71 -C3N-02034.WGS.N.hg38 C3N-02034 SAR WGS blood_normal CPT0099370002 73043cec-99f8-41d3-aa57-dc2ede108d33_wgs_gdc_realn.bam 83455265048 BAM NA d284eb55-8c35-4eed-be5d-6a7f3db49019 efa448d8b1da462401d108ada09071f7 hg38 Blood Derived Normal C3N-02034-31,C3N-02034-71 -C3N-02034.WGS.T C3N-02034 SAR WGS tumor CPT0099340009 CPT0099340009.WholeGenome.RP-1303.bam 61430048689 BAM NA 792a178f-f21f-4269-bac9-7a3053c03ebf 11710566dd9e4812e230c0d171ca9e70 hg19 Primary Tumor C3N-02034-02 -C3N-02034.WGS.T.hg38 C3N-02034 SAR WGS tumor CPT0099340009 d1809233-813b-4f83-b290-05aac22befab_wgs_gdc_realn.bam 90984467854 BAM NA 039e6da5-d240-4e48-a5d1-98e7cd801693 526dc27110487a31bc20f9cb94dd6362 hg38 Primary Tumor C3N-02034-02 -C3N-02034.WXS.A C3N-02034 SAR WXS tissue_normal CPT0099360006 CPT0099360006.WholeExome.RP-1303.bam 29299466917 BAM NA ee6ab106-764a-43f0-9a04-1ab41755cf34 003b29ef14f61733eff1364a463cace4 hg19 Solid Tissue Normal C3N-02034-06 -C3N-02034.WXS.A.hg38 C3N-02034 SAR WXS tissue_normal CPT0099360006 5d3cfd33-357b-4f75-86f2-fd6b5f00d7cd_wxs_gdc_realn.bam 39703498990 BAM NA a2b74fa8-439d-4304-83c6-054e9a9feb57 4b71d5fc09ee736070b74ade6e87886c hg38 Solid Tissue Normal C3N-02034-06 -C3N-02034.WXS.N C3N-02034 SAR WXS blood_normal CPT0099370002 CPT0099370002.WholeExome.RP-1303.bam 28859794224 BAM NA f1977e37-0319-4760-961b-23594f9b0e6c b01e5a992681071f4a18683fa82c4b0b hg19 Blood Derived Normal C3N-02034-31,C3N-02034-71 -C3N-02034.WXS.N.hg38 C3N-02034 SAR WXS blood_normal CPT0099370002 73043cec-99f8-41d3-aa57-dc2ede108d33_wxs_gdc_realn.bam 39846085776 BAM NA 07d1a465-70fd-4baa-baf9-f9408f30ad9e 08b33726254729294aec3d97d68f6281 hg38 Blood Derived Normal C3N-02034-31,C3N-02034-71 -C3N-02034.WXS.T C3N-02034 SAR WXS tumor CPT0099340009 CPT0099340009.WholeExome.RP-1303.bam 30703991349 BAM NA f8e225ce-ecc3-4a2e-9ea9-bb0ff13004f3 3458a44ca8dd8faa74e7a0b67a2e1dde hg19 Primary Tumor C3N-02034-02 -C3N-02034.WXS.T.hg38 C3N-02034 SAR WXS tumor CPT0099340009 d1809233-813b-4f83-b290-05aac22befab_wxs_gdc_realn.bam 41916649269 BAM NA 8068227f-3a98-46c5-a24e-9261add3cc7c 17e5c8c2caa5e360040a3adc981bc15c hg38 Primary Tumor C3N-02034-02 -C3N-02038.MethArray.Green.T C3N-02038 SAR Methylation Array tumor CPT0099190009 202234380069_R06C01_Grn.idat 13676246 IDAT Green 817afa33-6967-4af6-b825-000292fd5988 083d4aea3046cb0511411741da708697 NA Primary Tumor C3N-02038-01 -C3N-02038.MethArray.Red.T C3N-02038 SAR Methylation Array tumor CPT0099190009 202234380069_R06C01_Red.idat 13676246 IDAT Red b2a8b28c-d590-4b0f-99aa-7b711c27977a 93a09a992bea5fca93dda9c6f501d573 NA Primary Tumor C3N-02038-01 -C3N-02038.miRNA-Seq.T C3N-02038 SAR miRNA-Seq tumor CPT0099190006 181113_UNC31-K00269_0164_AH23NNBBXY_TCATTC_S21_L001_R1_001.unaln.bam 195175651 BAM NA 3e3cd272-7274-4920-9d28-34f5ab05a99e b0b94fee2c7f1d1746106d8a0c9b6ec2 NA Primary Tumor C3N-02038-01 -C3N-02038.miRNA-Seq.T.hg38 C3N-02038 SAR miRNA-Seq tumor CPT0099190006 eb5551df-46b5-46f1-9ec0-f7fc5ddb0392_mirnaseq_gdc_realn.bam 217752555 BAM NA c99c3b86-e7fc-4023-81e3-3220091f101b 6a1c714306c7cccd2787101cc9110310 hg38 Primary Tumor C3N-02038-01 -C3N-02038.RNA-Seq.chimeric.T.hg38 C3N-02038 SAR RNA-Seq tumor CPT0099190006 bdd032a9-1921-49dc-a56e-476128d34d47.rna_seq.chimeric.gdc_realn.bam 40927567 BAM chimeric 4b0b5d6d-ce7b-4286-ad72-6779883a4353 5d62efb40926b5ab072b4f5ab67f5578 hg38 Primary Tumor C3N-02038-01 -C3N-02038.RNA-Seq.genomic.T.hg38 C3N-02038 SAR RNA-Seq tumor CPT0099190006 bdd032a9-1921-49dc-a56e-476128d34d47.rna_seq.genomic.gdc_realn.bam 8994791566 BAM genomic 0e49ce6c-dd09-4ecc-a383-999625ecebcd e5f90d0e4b5729918771783f207b6f7a hg38 Primary Tumor C3N-02038-01 -C3N-02038.RNA-Seq.R1.T C3N-02038 SAR RNA-Seq tumor CPT0099190006 171107_UNC32-K00270_0063_BHLNTCBBXX_GTCCGC_S47_L004_R1_001.fastq.gz 3930390913 FASTQ NA 21cbd533-7f58-4920-80fb-0dc4078fbbd4 c6faac0f0d8ac652f4e61944bfa5ac60 NA Primary Tumor C3N-02038-01 -C3N-02038.RNA-Seq.R2.T C3N-02038 SAR RNA-Seq tumor CPT0099190006 171107_UNC32-K00270_0063_BHLNTCBBXX_GTCCGC_S47_L004_R2_001.fastq.gz 4420417484 FASTQ NA 0417f70c-7d40-4655-9a68-295f0d95253d d206af741883760278f04a2bc81f9237 NA Primary Tumor C3N-02038-01 -C3N-02038.RNA-Seq.transcriptome.T.hg38 C3N-02038 SAR RNA-Seq tumor CPT0099190006 bdd032a9-1921-49dc-a56e-476128d34d47.rna_seq.transcriptome.gdc_realn.bam 10482409217 BAM transcriptome 1baa227d-c260-4fb7-bdf2-72b9ce3b682d 230092f56fb311a68545e5248abeafda hg38 Primary Tumor C3N-02038-01 -C3N-02038.WGS.N C3N-02038 SAR WGS blood_normal CPT0099230002 CPT0099230002.WholeGenome.RP-1303.bam 66671719735 BAM NA 09854655-62bb-4627-92ee-c5ad8d1afca6 77c73dff91d7dd226a46569a67d47349 hg19 Blood Derived Normal C3N-02038-31,C3N-02038-71 -C3N-02038.WGS.N.hg38 C3N-02038 SAR WGS blood_normal CPT0099230002 c40cedf1-d68d-454c-a81e-c9c3d4751aa6_wgs_gdc_realn.bam 97328160214 BAM NA 30048835-cf90-46c5-a362-07ad1fa73779 af4bd9d4355e339daca2f3c6ffe5837b hg38 Blood Derived Normal C3N-02038-31,C3N-02038-71 -C3N-02038.WGS.T C3N-02038 SAR WGS tumor CPT0099190009 CPT0099190009.WholeGenome.RP-1303.bam 71000806755 BAM NA a4cb7225-e0ad-4145-9d67-fb163b43702f ffe1098c92f6529b650bc2833dd4e5bb hg19 Primary Tumor C3N-02038-01 -C3N-02038.WGS.T.hg38 C3N-02038 SAR WGS tumor CPT0099190009 306b6040-f58f-4b30-8137-e79a3183fccf_wgs_gdc_realn.bam 105871758165 BAM NA 829e1b93-1eaa-47ac-870a-91532100febf 6bbf8577eebc93ce1f97d28275f83ede hg38 Primary Tumor C3N-02038-01 -C3N-02038.WXS.N C3N-02038 SAR WXS blood_normal CPT0099230002 CPT0099230002.WholeExome.RP-1303.bam 33921486685 BAM NA 590a0012-3a4e-4479-bd75-6e1d09b0ed80 6fed10a1d93ff7f25f124d0550fdd6fa hg19 Blood Derived Normal C3N-02038-31,C3N-02038-71 -C3N-02038.WXS.N.hg38 C3N-02038 SAR WXS blood_normal CPT0099230002 c40cedf1-d68d-454c-a81e-c9c3d4751aa6_wxs_gdc_realn.bam 46444117700 BAM NA 1c3c689d-1f45-4ac2-bf3e-ea0c0644c3e1 4f8505da95b5f0d25f998fbde0873373 hg38 Blood Derived Normal C3N-02038-31,C3N-02038-71 -C3N-02038.WXS.T C3N-02038 SAR WXS tumor CPT0099190009 CPT0099190009.WholeExome.RP-1303.bam 37477048593 BAM NA 9005b29e-9a1a-41c8-9a8f-c12190ca176c e073e0e376a32fdeb1b31d56fd9f0dd0 hg19 Primary Tumor C3N-02038-01 -C3N-02038.WXS.T.hg38 C3N-02038 SAR WXS tumor CPT0099190009 306b6040-f58f-4b30-8137-e79a3183fccf_wxs_gdc_realn.bam 51433606641 BAM NA 3f7bc846-95a7-4a46-b1e8-bd42e39168c3 a5d331bd0e636bbf33b71b8c347a7cda hg38 Primary Tumor C3N-02038-01 C3N-02061.MethArray.Green.T C3N-02061 UCEC Methylation Array tumor CPT0134310011 203561450046_R03C01_Grn.idat 13676211 IDAT Green 02d973a2-8f47-4edd-8f95-6f3b99c0a2d5 8aac8ced04423a898b71af6fc2de0e98 NA Primary Tumor C3N-02061-02 C3N-02061.MethArray.Red.T C3N-02061 UCEC Methylation Array tumor CPT0134310011 203561450046_R03C01_Red.idat 13676211 IDAT Red 89b1ec19-aa2e-4e6a-aab4-064c998b3e7c 92d6789381ec5e092c57d3ba9bc0871f NA Primary Tumor C3N-02061-02 C3N-02061.miRNA-Seq.T C3N-02061 UCEC miRNA-Seq tumor CPT0134310018 190508_UNC31-K00269_0215_BH7FYKBBXY_CTATAC_S39_L004_R1_001.unaln.bam 255391443 BAM NA 04a69e12-15b8-44bd-b73f-c2607651671d 11fa6e1dcf54163807ed2928328ce156 NA Primary Tumor C3N-02061-02 @@ -34858,8 +33961,8 @@ C3N-02729.WXS.N C3N-02729 LUAD WXS blood_normal CPT0148310002 CPT0148310002.Whol C3N-02729.WXS.N.hg38 C3N-02729 LUAD WXS blood_normal CPT0148310002 b323a8a3-1853-41c7-b166-dfa3a1dbc32b_wxs_gdc_realn.bam 43416494427 BAM NA 17748956-bce7-4c4d-a6fe-725f2c7cc030 e23d113808c9e812723bc9df52491c13 hg38 Blood Derived Normal C3N-02729-71 C3N-02729.WXS.T C3N-02729 LUAD WXS tumor CPT0148280010 CPT0148280010.WholeExome.RP-1303.bam 24893784428 BAM NA a7451968-b30e-46d0-af3c-0725bf2c6de7 9779dca3af779e8e22f87101948617b3 hg19 Primary Tumor C3N-02729-01,C3N-02729-02 C3N-02729.WXS.T.hg38 C3N-02729 LUAD WXS tumor CPT0148280010 a47247f3-753f-4e6f-820f-4c408ed60d32_wxs_gdc_realn.bam 34332633925 BAM NA 5f2ff26c-b856-4ec4-978d-a214595c88d2 ead4fc3d0c0be7ed97775eca02e6b15d hg38 Primary Tumor C3N-02729-01,C3N-02729-02 -C3N-02730.MethArray.Green.T C3N-02730 HNSCC Methylation Array tumor CPT0207870007 203281980233_R04C01_Grn.idat 13676211 IDAT Green a37c8c8e-442e-4d4a-a04a-c857f41ef823 d75be2f190f5fb0b078f29ef1c33368d NA Primary Tumor C3N-02730-01,C3N-02730-02 -C3N-02730.MethArray.Red.T C3N-02730 HNSCC Methylation Array tumor CPT0207870007 203281980233_R04C01_Red.idat 13676211 IDAT Red 90d1ff03-51d5-4e72-98ee-c79fff3e5135 22b5b45e5c0ff9a8c92c086a20fcfc97 NA Primary Tumor C3N-02730-01,C3N-02730-02 +C3N-02730.MethArray.Green.T.UNK_pYXq94V C3N-02730 HNSCC Methylation Array tumor CPT0207870007 203281980233_R04C01_Grn.idat 13676211 IDAT Green a37c8c8e-442e-4d4a-a04a-c857f41ef823 d75be2f190f5fb0b078f29ef1c33368d NA Primary Tumor C3N-02730-01,C3N-02730-02 sample_tag=UNK_pYXq94V The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-02730.MethArray.Red.T.UNK_pYXq94V C3N-02730 HNSCC Methylation Array tumor CPT0207870007 203281980233_R04C01_Red.idat 13676211 IDAT Red 90d1ff03-51d5-4e72-98ee-c79fff3e5135 22b5b45e5c0ff9a8c92c086a20fcfc97 NA Primary Tumor C3N-02730-01,C3N-02730-02 sample_tag=UNK_pYXq94V The WGS data for this aliquot failed the GDC harmonization pipeline. C3N-02730.miRNA-Seq.T C3N-02730 HNSCC miRNA-Seq tumor CPT0207870010 190228_UNC32-K00270_0151_AHYLY3BBXX_GTAGAG_S17_L003_R1_001.unaln.bam 246676588 BAM NA f30694c8-f9ff-40f9-b0d2-1c05b81ddeac 0a99e2e461d2b2af668e598195fae4d2 NA Primary Tumor C3N-02730-01,C3N-02730-02 C3N-02730.miRNA-Seq.T.hg38 C3N-02730 HNSCC miRNA-Seq tumor CPT0207870010 486b5628-2ec1-4232-b9e9-3ad21e3d6efd_mirnaseq_gdc_realn.bam 272887972 BAM NA 21819938-2e92-415c-a2a6-0d534bc4cf39 d260551694bf48f5d1aba0c781a5086d hg38 Primary Tumor C3N-02730-01,C3N-02730-02 C3N-02730.RNA-Seq.chimeric.T.hg38 C3N-02730 HNSCC RNA-Seq tumor CPT0207870010 e81c43a4-4b5a-49ac-8383-63bea61f2e0e.rna_seq.chimeric.gdc_realn.bam 336773960 BAM chimeric 9a6650b7-56d9-44b8-882f-e568ea470fa5 e4deb7582aa8d0295ea477f1d4d6c868 hg38 Primary Tumor C3N-02730-01,C3N-02730-02 @@ -34867,14 +33970,14 @@ C3N-02730.RNA-Seq.genomic.T.hg38 C3N-02730 HNSCC RNA-Seq tumor CPT0207870010 e81 C3N-02730.RNA-Seq.R1.T C3N-02730 HNSCC RNA-Seq tumor CPT0207870010 190328_UNC31-K00269_0204_BH5F5NBBXY_GTCCGC_S7_L008_R1_001.fastq.gz 3945936473 FASTQ NA 0a9da540-489a-45dd-919c-e7962460dc8b 8609f8789cf05ba11188d015ae523a83 NA Primary Tumor C3N-02730-01,C3N-02730-02 C3N-02730.RNA-Seq.R2.T C3N-02730 HNSCC RNA-Seq tumor CPT0207870010 190328_UNC31-K00269_0204_BH5F5NBBXY_GTCCGC_S7_L008_R2_001.fastq.gz 4699034398 FASTQ NA 0ee7c388-3057-4e07-afb9-84ece3aaea54 a0c9bd7b8a208cbd6318434a4a39160c NA Primary Tumor C3N-02730-01,C3N-02730-02 C3N-02730.RNA-Seq.transcriptome.T.hg38 C3N-02730 HNSCC RNA-Seq tumor CPT0207870010 e81c43a4-4b5a-49ac-8383-63bea61f2e0e.rna_seq.transcriptome.gdc_realn.bam 11543110949 BAM transcriptome 9fd9cd27-44f9-4df7-9162-fbe2d9143f39 b6c53d25ea16e65a5de0fdc7d798e942 hg38 Primary Tumor C3N-02730-01,C3N-02730-02 -C3N-02730.WGS.N C3N-02730 HNSCC WGS blood_normal CPT0207930002 CPT0207930002.WholeGenome.RP-1303.bam 76274780633 BAM NA 80fc096b-71a5-41cb-80f4-8f5c6273e800 77072bd20dd05c052aaf18551b29103a hg19 Blood Derived Normal C3N-02730-71 -C3N-02730.WGS.N.hg38 C3N-02730 HNSCC WGS blood_normal CPT0207930002 94f56b2c-3b64-4b92-b36c-8e095ce5d28d_wgs_gdc_realn.bam 114074944161 BAM NA 7256b713-103f-435d-8f1c-9910aa083afd 9a24efc063f12facea5e8d5388dd3732 hg38 Blood Derived Normal C3N-02730-71 -C3N-02730.WGS.T C3N-02730 HNSCC WGS tumor CPT0207870007 CPT0207870007.WholeGenome.RP-1303.bam 60707914043 BAM NA 84fa8e4d-90c4-4a72-aaf4-50ee5f678574 f07e3fa0d9948ac06eeddb9bc9195c15 hg19 Primary Tumor C3N-02730-01,C3N-02730-02 -C3N-02730.WGS.T.hg38 C3N-02730 HNSCC WGS tumor CPT0207870007 ac6a9fd3-ca87-4867-94ab-03056f12936a_wgs_gdc_realn.bam 87993457005 BAM NA ec4fb12e-ccd3-46a1-8eae-877c0fbf1831 4fb32ec3011b1f69005d78e71352f97c hg38 Primary Tumor C3N-02730-01,C3N-02730-02 -C3N-02730.WXS.N C3N-02730 HNSCC WXS blood_normal CPT0207930002 CPT0207930002.WholeExome.RP-1303.bam 42027247122 BAM NA 349ae85a-e9ca-4acc-9f93-6503548ea7fb 64238257dc660bf72ed265f2fb14c212 hg19 Blood Derived Normal C3N-02730-71 -C3N-02730.WXS.N.hg38 C3N-02730 HNSCC WXS blood_normal CPT0207930002 94f56b2c-3b64-4b92-b36c-8e095ce5d28d_wxs_gdc_realn.bam 57911338150 BAM NA 100e34c1-170c-4dbd-ad63-de812aa9378a 0da7c8abf72b6c66541fe31f241fc67c hg38 Blood Derived Normal C3N-02730-71 -C3N-02730.WXS.T C3N-02730 HNSCC WXS tumor CPT0207870007 CPT0207870007.WholeExome.RP-1303.bam 23614581238 BAM NA 5767071e-3ec2-4107-ac66-a48505dcaeff 31fa7ce20515ffc1471e59cfcaa0057c hg19 Primary Tumor C3N-02730-01,C3N-02730-02 -C3N-02730.WXS.T.hg38 C3N-02730 HNSCC WXS tumor CPT0207870007 ac6a9fd3-ca87-4867-94ab-03056f12936a_wxs_gdc_realn.bam 32180334608 BAM NA fb95b973-712c-4c79-ac6e-670018f48c16 e07b8af40a787dcb3cc099ff16358677 hg38 Primary Tumor C3N-02730-01,C3N-02730-02 +C3N-02730.WGS.N.UNK_kROlzAY C3N-02730 HNSCC WGS blood_normal CPT0207930002 CPT0207930002.WholeGenome.RP-1303.bam 76274780633 BAM NA 80fc096b-71a5-41cb-80f4-8f5c6273e800 77072bd20dd05c052aaf18551b29103a hg19 Blood Derived Normal C3N-02730-71 sample_tag=UNK_kROlzAY The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-02730.WGS.N.UNK_kROlzAY.hg38 C3N-02730 HNSCC WGS blood_normal CPT0207930002 94f56b2c-3b64-4b92-b36c-8e095ce5d28d_wgs_gdc_realn.bam 114074944161 BAM NA 7256b713-103f-435d-8f1c-9910aa083afd 9a24efc063f12facea5e8d5388dd3732 hg38 Blood Derived Normal C3N-02730-71 sample_tag=UNK_kROlzAY The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-02730.WGS.T.UNK_pYXq94V C3N-02730 HNSCC WGS tumor CPT0207870007 CPT0207870007.WholeGenome.RP-1303.bam 60707914043 BAM NA 84fa8e4d-90c4-4a72-aaf4-50ee5f678574 f07e3fa0d9948ac06eeddb9bc9195c15 hg19 Primary Tumor C3N-02730-01,C3N-02730-02 sample_tag=UNK_pYXq94V The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-02730.WGS.T.UNK_pYXq94V.hg38 C3N-02730 HNSCC WGS tumor CPT0207870007 ac6a9fd3-ca87-4867-94ab-03056f12936a_wgs_gdc_realn.bam 87993457005 BAM NA ec4fb12e-ccd3-46a1-8eae-877c0fbf1831 4fb32ec3011b1f69005d78e71352f97c hg38 Primary Tumor C3N-02730-01,C3N-02730-02 sample_tag=UNK_pYXq94V The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-02730.WXS.N.UNK_kROlzAY C3N-02730 HNSCC WXS blood_normal CPT0207930002 CPT0207930002.WholeExome.RP-1303.bam 42027247122 BAM NA 349ae85a-e9ca-4acc-9f93-6503548ea7fb 64238257dc660bf72ed265f2fb14c212 hg19 Blood Derived Normal C3N-02730-71 sample_tag=UNK_kROlzAY The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-02730.WXS.N.UNK_kROlzAY.hg38 C3N-02730 HNSCC WXS blood_normal CPT0207930002 94f56b2c-3b64-4b92-b36c-8e095ce5d28d_wxs_gdc_realn.bam 57911338150 BAM NA 100e34c1-170c-4dbd-ad63-de812aa9378a 0da7c8abf72b6c66541fe31f241fc67c hg38 Blood Derived Normal C3N-02730-71 sample_tag=UNK_kROlzAY The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-02730.WXS.T.UNK_pYXq94V C3N-02730 HNSCC WXS tumor CPT0207870007 CPT0207870007.WholeExome.RP-1303.bam 23614581238 BAM NA 5767071e-3ec2-4107-ac66-a48505dcaeff 31fa7ce20515ffc1471e59cfcaa0057c hg19 Primary Tumor C3N-02730-01,C3N-02730-02 sample_tag=UNK_pYXq94V The WGS data for this aliquot failed the GDC harmonization pipeline. +C3N-02730.WXS.T.UNK_pYXq94V.hg38 C3N-02730 HNSCC WXS tumor CPT0207870007 ac6a9fd3-ca87-4867-94ab-03056f12936a_wxs_gdc_realn.bam 32180334608 BAM NA fb95b973-712c-4c79-ac6e-670018f48c16 e07b8af40a787dcb3cc099ff16358677 hg38 Primary Tumor C3N-02730-01,C3N-02730-02 sample_tag=UNK_pYXq94V The WGS data for this aliquot failed the GDC harmonization pipeline. C3N-02754.RNA-Seq.chimeric.A.BIOTEXT_316lP9p.hg38 C3N-02754 PDA RNA-Seq tissue_normal CPT0183870036 6928c457-682e-4237-ba61-51358700f73e.rna_seq.chimeric.gdc_realn.bam 493706173 BAM chimeric 1c5db054-a8f6-49d4-b795-79d1401b0650 40da14bd9a7504e537788ab441229178 hg38 Solid Tissue Normal C3N-02754-03 sample_tag=BIOTEXT_316lP9p Duplicate item: PDA BioTEXT RNA C3N-02754.RNA-Seq.chimeric.T.BIOTEXT_9r98LJ8.hg38 C3N-02754 PDA RNA-Seq tumor CPT0183850042 e0349eba-49e3-4f31-b705-32f0f66254f6.rna_seq.chimeric.gdc_realn.bam 565206889 BAM chimeric 07504c54-b5fc-4e88-8bac-7427e4e6f6fd dde4fe2f23dfa9df751ecbffa334f74e hg38 Primary Tumor C3N-02754-01 sample_tag=BIOTEXT_9r98LJ8 Duplicate item: PDA BioTEXT RNA C3N-02754.RNA-Seq.chimeric.T.BIOTEXT_jRY2OXY.hg38 C3N-02754 PDA RNA-Seq tumor CPT0183850045 641e23bf-657a-45b9-8201-b149170224e3.rna_seq.chimeric.gdc_realn.bam 497808158 BAM chimeric 06e7c4a4-a1b9-40ba-a576-f297193f5886 b03be25b70402ec9c20e6858e0a985f1 hg38 Primary Tumor C3N-02754-01 sample_tag=BIOTEXT_jRY2OXY Duplicate item: PDA BioTEXT RNA @@ -37353,27 +36456,6 @@ C3N-03226.WXS.N C3N-03226 HNSCC WXS blood_normal CPT0194530002 CPT0194530002.Who C3N-03226.WXS.N.hg38 C3N-03226 HNSCC WXS blood_normal CPT0194530002 8de2dbc8-c6e1-4920-877f-00ac954e87cc_wxs_gdc_realn.bam 34429694025 BAM NA 3c8cb21b-c84b-48da-b870-d4b941b0b530 764a81784415237014e48a0e0cfcd498 hg38 Blood Derived Normal C3N-03226-71 C3N-03226.WXS.T C3N-03226 HNSCC WXS tumor CPT0194420009 CPT0194420009.WholeExome.RP-1303.bam 23112506510 BAM NA 5f61df23-b135-4421-a013-b86cc5ba0b1a 5ead4a9e7af1dc2c71d8bbbdd9677699 hg19 Primary Tumor C3N-03226-02 C3N-03226.WXS.T.hg38 C3N-03226 HNSCC WXS tumor CPT0194420009 7664042d-ae27-4d60-9731-0c5cd47b6cce_wxs_gdc_realn.bam 31628258860 BAM NA 60017027-d9c3-4ef5-b9c2-199b29dacd42 684287a25d96769c078192b43b1765c3 hg38 Primary Tumor C3N-03226-02 -C3N-03230.MethArray.Green.T C3N-03230 SAR Methylation Array tumor CPT0180420006 203027390034_R06C01_Grn.idat 13676226 IDAT Green 82617bd8-8211-4f4e-8c70-f1a4f660cf6b 3894a25478d22a2c9793333010c55e0b NA Primary Tumor C3N-03230-02 -C3N-03230.MethArray.Red.T C3N-03230 SAR Methylation Array tumor CPT0180420006 203027390034_R06C01_Red.idat 13676226 IDAT Red 794eb51e-10db-4211-bb49-4078d7804696 a472a100d567ed2bf3a014ba2c3d4de3 NA Primary Tumor C3N-03230-02 -C3N-03230.miRNA-Seq.T C3N-03230 SAR miRNA-Seq tumor CPT0180420009 181119_UNC31-K00269_0165_AH27WCBBXY_GTTTCG_S45_L002_R1_001.unaln.bam 202860230 BAM NA cfc9d0a5-d6c6-4071-ac49-a2ddc0f904b8 39a8cd71457b092691241082d2c21683 NA Primary Tumor C3N-03230-02 -C3N-03230.miRNA-Seq.T.hg38 C3N-03230 SAR miRNA-Seq tumor CPT0180420009 4d81c5c1-a4f5-4e63-befc-06078482822c_mirnaseq_gdc_realn.bam 231945075 BAM NA 00399bbf-ddec-4b7b-843c-915a9f7baa49 764bbf531fbda16893f32b46865ca8a6 hg38 Primary Tumor C3N-03230-02 -C3N-03230.RNA-Seq.chimeric.T.hg38 C3N-03230 SAR RNA-Seq tumor CPT0180420009 249cadf3-8d8e-4ee0-8f43-c99f71edfe68.rna_seq.chimeric.gdc_realn.bam 42993587 BAM chimeric 24c94ce5-4702-46af-8ab9-dad0b8ab4894 154315b0322f2797ce4a63facec861a6 hg38 Primary Tumor C3N-03230-02 -C3N-03230.RNA-Seq.genomic.T.hg38 C3N-03230 SAR RNA-Seq tumor CPT0180420009 249cadf3-8d8e-4ee0-8f43-c99f71edfe68.rna_seq.genomic.gdc_realn.bam 9566522292 BAM genomic 77ab5bcf-d706-49b7-87b0-dc8d321ecb0d 099d1dd2883b1044c17b88522e7a3421 hg38 Primary Tumor C3N-03230-02 -C3N-03230.RNA-Seq.R1.T C3N-03230 SAR RNA-Seq tumor CPT0180420009 180516_UNC31-K00269_0130_BHV22JBBXX_CGTACG_S23_L006_R1_001.fastq.gz 4411942338 FASTQ NA b939816b-b6d7-4e00-a367-ae3d0899d1d0 9829f8d14044dd9aef315f7001014b2d NA Primary Tumor C3N-03230-02 -C3N-03230.RNA-Seq.R2.T C3N-03230 SAR RNA-Seq tumor CPT0180420009 180516_UNC31-K00269_0130_BHV22JBBXX_CGTACG_S23_L006_R2_001.fastq.gz 4837089707 FASTQ NA 07992eb1-9a08-49bf-98d1-27178c8db00d 19d876c3fceede242464a3391e109da0 NA Primary Tumor C3N-03230-02 -C3N-03230.RNA-Seq.transcriptome.T.hg38 C3N-03230 SAR RNA-Seq tumor CPT0180420009 249cadf3-8d8e-4ee0-8f43-c99f71edfe68.rna_seq.transcriptome.gdc_realn.bam 13117603227 BAM transcriptome 5133e5ab-6f3f-43cf-809c-dfe15241273d 4db89a6d22146805dd289c88176a936e hg38 Primary Tumor C3N-03230-02 -C3N-03230.WGS.A C3N-03230 SAR WGS tissue_normal CPT0180440006 CPT0180440006.WholeGenome.RP-1303.bam 60227065173 BAM NA 809124af-1a73-433c-b9c2-b63c20b6c9ba 3bd38a65e28210f82eaffc6cd9eaae91 hg19 Solid Tissue Normal C3N-03230-06 -C3N-03230.WGS.A.hg38 C3N-03230 SAR WGS tissue_normal CPT0180440006 18f767a1-e405-439b-ae72-0b744eedceac_wgs_gdc_realn.bam 88171561722 BAM NA 75f8ec9c-61c9-461b-8717-1038524de38b e854e154db0922f981129518dce88100 hg38 Solid Tissue Normal C3N-03230-06 -C3N-03230.WGS.N C3N-03230 SAR WGS blood_normal CPT0180530002 CPT0180530002.WholeGenome.RP-1303.bam 63072421093 BAM NA ec2f2bde-522a-4a88-b32f-f0d8aaf086c2 145bacbae6def10843329a25aa4dddb8 hg19 Blood Derived Normal C3N-03230-71 -C3N-03230.WGS.N.hg38 C3N-03230 SAR WGS blood_normal CPT0180530002 974e87f9-b697-488c-a2f5-3576c2282ae6_wgs_gdc_realn.bam 92257027722 BAM NA ad88f11f-0d91-494b-8074-1fd596f987e1 b9a84581eee17854d3ba47dbc22456da hg38 Blood Derived Normal C3N-03230-71 -C3N-03230.WGS.T C3N-03230 SAR WGS tumor CPT0180420006 CPT0180420006.WholeGenome.RP-1303.bam 64467882874 BAM NA f90bec63-2b5c-4cd9-8c64-831bc98c69a0 eb37a0896f5633462fefc1e29bbfb0c1 hg19 Primary Tumor C3N-03230-02 -C3N-03230.WGS.T.hg38 C3N-03230 SAR WGS tumor CPT0180420006 10226083-651a-4cdf-b160-d97b3bef08b4_wgs_gdc_realn.bam 93109857641 BAM NA cb91fcca-d49a-48f3-9e5b-24361084af02 1a0027603ec0460a802968597dec413c hg38 Primary Tumor C3N-03230-02 -C3N-03230.WXS.A C3N-03230 SAR WXS tissue_normal CPT0180440006 CPT0180440006.WholeExome.RP-1303.bam 22681394649 BAM NA e25426b4-484c-49f1-ac4e-a6a9f00154fe 4de6d5f71c4938694f38f20977e2750d hg19 Solid Tissue Normal C3N-03230-06 -C3N-03230.WXS.A.hg38 C3N-03230 SAR WXS tissue_normal CPT0180440006 18f767a1-e405-439b-ae72-0b744eedceac_wxs_gdc_realn.bam 30395762077 BAM NA 09ba7b44-e1f5-4d6d-b498-ae096cc239ae 316e753feb750c9d698413fa9dce4697 hg38 Solid Tissue Normal C3N-03230-06 -C3N-03230.WXS.N C3N-03230 SAR WXS blood_normal CPT0180530002 CPT0180530002.WholeExome.RP-1303.bam 26136174261 BAM NA eac7b9f1-541b-4b02-8230-883244f29ddc 82bffde0321cd72dc6c1dbc7b031ad1c hg19 Blood Derived Normal C3N-03230-71 -C3N-03230.WXS.N.hg38 C3N-03230 SAR WXS blood_normal CPT0180530002 974e87f9-b697-488c-a2f5-3576c2282ae6_wxs_gdc_realn.bam 36011545737 BAM NA 0276520e-b1a3-49b8-8483-2338dcbb0fcb 923f73644ea57c5fa72ccd1d30cdbe3d hg38 Blood Derived Normal C3N-03230-71 -C3N-03230.WXS.T C3N-03230 SAR WXS tumor CPT0180420006 CPT0180420006.WholeExome.RP-1303.bam 23516188225 BAM NA 11ac38fe-3b4a-4672-a975-efd900d4deae 4e72654ff48056879fa1f485f4c1397b hg19 Primary Tumor C3N-03230-02 -C3N-03230.WXS.T.hg38 C3N-03230 SAR WXS tumor CPT0180420006 10226083-651a-4cdf-b160-d97b3bef08b4_wxs_gdc_realn.bam 31568379785 BAM NA 3cd214d9-bed4-44ad-abc3-6fa08320928b b6ab3f7abfec68a459e50c58cab3883c hg38 Primary Tumor C3N-03230-02 C3N-03233.MethArray.Green.A C3N-03233 LUAD Methylation Array tissue_normal CPT0180740006 203219670118_R06C01_Grn.idat 13676216 IDAT Green 9463f036-71cc-4aa2-8614-e122f0f75fee 40cccf21a5f323a8399060c4074c3b72 NA Solid Tissue Normal C3N-03233-06 C3N-03233.MethArray.Green.T C3N-03233 LUAD Methylation Array tumor CPT0180730006 203220070156_R08C01_Grn.idat 13676216 IDAT Green 3928f56b-ca25-4240-aaf7-6a28e3ab0c84 68179f5807a6f8fa5aeb4cf468e93fb3 NA Primary Tumor C3N-03233-03 C3N-03233.MethArray.Red.A C3N-03233 LUAD Methylation Array tissue_normal CPT0180740006 203219670118_R06C01_Red.idat 13676216 IDAT Red db4c1c5c-c72a-46da-a44b-493d88b341ca d8c3ae1a0a89b2ea8a80ea7dfdbd1345 NA Solid Tissue Normal C3N-03233-06 @@ -38544,6 +37626,10 @@ C3N-03785.WXS.T.hg38 C3N-03785 HNSCC WXS tumor CPT0245680006 58d9cb22-cc39-4db7- C3N-03788.MethArray.Green.T C3N-03788 GBM Methylation Array tumor CPT0457770011 206250290128_R07C01_Grn.idat 13677950 IDAT Green cc55834b-f2a3-4144-b0af-39170068fc1d 4b145b2cdf0df816b97155059d34b878 NA Primary Tumor C3N-03788-03 C3N-03788.MethArray.Red.T C3N-03788 GBM Methylation Array tumor CPT0457770011 206250290128_R07C01_Red.idat 13677950 IDAT Red c88b0907-bfc3-42fb-81d1-b8f069fc9c85 7ac51ce78eaa54f0509518b40ca3d1c3 NA Primary Tumor C3N-03788-03 C3N-03788.miRNA-Seq.T C3N-03788 GBM miRNA-Seq tumor CPT0457770008 220505_UNC32-K00270_0319_AHMV2KBBXY_CTCAGA_S8_L003_R1_001.unaln.bam 381775024 BAM NA df8726e2-4517-4a7a-bdaf-9289ab6ad3f5 3ecb5f14597b720c4de18afc61cf8f8a NA Primary Tumor C3N-03788-03 +C3N-03788.miRNA-Seq.T.hg38 C3N-03788 GBM miRNA-Seq tumor CPT0457770008 d8197cf6-869b-455b-b0ac-00d34a7e3eb6_mirnaseq_gdc_realn.bam 443353789 BAM NA d4df0370-29b4-4b40-b64d-c07638d547b4 5ee687f137f09c2ce42fda76d035aa94 hg38 Primary Tumor C3N-03788-03 +C3N-03788.RNA-Seq.R1.T C3N-03788 GBM RNA-Seq tumor CPT0457770008 220603_UNC32-K00270_0322_BHNKFLBBXY_AACGTTCC-GGAGTACT_S1_L006_R1_001.fastq.gz 3600988531 FASTQ NA 384ad3cb-eafa-44e5-b6bd-6668d2cbf435 d4637272b0fb6f91adfeb3cb94b7525e NA Primary Tumor C3N-03788-03 +C3N-03788.RNA-Seq.R2.T C3N-03788 GBM RNA-Seq tumor CPT0457770008 220603_UNC32-K00270_0322_BHNKFLBBXY_AACGTTCC-GGAGTACT_S1_L006_R2_001.fastq.gz 3808720166 FASTQ NA 8ea7fb5a-7ab8-4ce4-bf91-abeb62546d76 29397817e7be40c6146805e5c326309c NA Primary Tumor C3N-03788-03 +C3N-03788.WGS.N C3N-03788 GBM WGS blood_normal CPT0457870001 CPT0457870001.WholeGenome.RP-2158.bam 62556087199 BAM NA 29306a95-3819-46f2-8462-a99e2addd672 5c283d67b8d7157c2d0e37de16aca6c1 hg19 Blood Derived Normal C3N-03788-31 C3N-03789.MethArray.Green.T C3N-03789 GBM Methylation Array tumor CPT0244860006 204372030022_R06C01_Grn.idat 13677905 IDAT Green 36949622-9245-4639-adbb-5d3825974411 b2699c6a827038d7e364e088d58b08b0 NA Primary Tumor C3N-03789-05 C3N-03789.MethArray.Red.T C3N-03789 GBM Methylation Array tumor CPT0244860006 204372030022_R06C01_Red.idat 13677905 IDAT Red 801da269-0c53-48e6-9335-e70300569747 4458434e8c9e1e9ee42b9674d717f239 NA Primary Tumor C3N-03789-05 C3N-03789.miRNA-Seq.T C3N-03789 GBM miRNA-Seq tumor CPT0244860009 200403_UNC31-K00269_0274_AHCF7GBBXY_TTAGGC_S27_L002_R1_001.unaln.bam 225451718 BAM NA b660df27-cdb3-4bb7-960c-cd23e8296233 ff52890e8305588e649255f692288db9 NA Primary Tumor C3N-03789-05 diff --git a/CPTAC3.Demographics.dat b/CPTAC3.Demographics.dat index 8f3b7c5..00b68d1 100644 --- a/CPTAC3.Demographics.dat +++ b/CPTAC3.Demographics.dat @@ -10,9 +10,7 @@ C3L-00008 UCEC not hispanic or latino female white -21504 C3L-00009 LUAD not hispanic or latino male white -27968 C3L-00010 CCRCC not hispanic or latino male white -11025 C3L-00011 CCRCC not hispanic or latino female white -23307 -C3L-00016 GBM not hispanic or latino male white -21952 C3L-00017 PDA not hispanic or latino male white -25349 -C3L-00019 GBM not hispanic or latino female white -17985 C3L-00026 CCRCC not hispanic or latino female white -23881 C3L-00029 SAR not hispanic or latino male white -19505 C3L-00032 UCEC not hispanic or latino female white -18578 @@ -21,7 +19,6 @@ C3L-00079 CCRCC not hispanic or latino male white -18021 C3L-00080 LUAD not hispanic or latino male white -21194 C3L-00081 LSCC not hispanic or latino female white -22629 C3L-00083 LUAD not hispanic or latino male white -26127 -C3L-00084 UCEC not hispanic or latino female white -27032 C3L-00086 UCEC not hispanic or latino female white -20790 C3L-00088 CCRCC not hispanic or latino male white -26509 C3L-00090 UCEC not hispanic or latino female white -27587 @@ -48,12 +45,8 @@ C3L-00165 CCRCC hispanic or latino male white -17397 C3L-00183 CCRCC hispanic or latino female white -12359 C3L-00189 PDA not reported female not reported -24958 C3L-00263 LUAD not hispanic or latino male white -29164 -C3L-00265 GBM not hispanic or latino male white -24959 -C3L-00275 CM not reported male white -18891 C3L-00277 PDA not reported male white -25515 -C3L-00278 GBM not hispanic or latino male white -22936 C3L-00279 LUAD not reported female white -26600 -C3L-00349 GBM not hispanic or latino female white -21125 C3L-00356 UCEC not hispanic or latino female white -26668 C3L-00358 UCEC not hispanic or latino female white -32872 C3L-00359 CCRCC not hispanic or latino female white -26864 @@ -71,8 +64,6 @@ C3L-00415 LSCC not hispanic or latino female white -23586 C3L-00416 CCRCC not hispanic or latino male white -22653 C3L-00418 CCRCC not hispanic or latino female white -20747 C3L-00422 LUAD hispanic or latino female Unknown -12844 -C3L-00424 GBM not hispanic or latino female white -27080 -C3L-00429 GBM not hispanic or latino male white -30187 C3L-00444 LUAD not reported female not reported -22461 C3L-00445 LSCC not reported male not reported -27320 C3L-00446 LUAD not reported male not reported -26653 @@ -89,20 +80,15 @@ C3L-00460 AML not reported female not reported -24457 C3L-00461 AML not reported male not reported -25865 C3L-00465 AML not reported male not reported -25056 C3L-00503 LSCC not hispanic or latino female white -27505 -C3L-00506 GBM not hispanic or latino male white -22543 C3L-00510 LUAD not reported female Unknown -29337 -C3L-00528 GBM not hispanic or latino male white -18891 C3L-00540 AML not reported female white -25217 C3L-00561 CCRCC not hispanic or latino male white -18481 C3L-00563 UCEC not hispanic or latino female asian -22777 -C3L-00564 SAR not hispanic or latino male white -23949 -C3L-00567 SAR not hispanic or latino female white -19727 C3L-00568 LSCC hispanic or latino female white -27278 C3L-00581 CCRCC not hispanic or latino male white -19213 C3L-00583 CCRCC hispanic or latino male white -20237 C3L-00586 UCEC not hispanic or latino female white -18580 C3L-00589 PDA not hispanic or latino male white -29322 -C3L-00591 GBM not hispanic or latino male white -22289 C3L-00598 PDA not reported female not reported -22466 C3L-00599 PDA not reported male not reported -22828 C3L-00601 UCEC not hispanic or latino female white -20899 @@ -117,10 +103,7 @@ C3L-00614 AML not reported male white -22119 C3L-00617 AML not reported male not reported -18262 C3L-00622 PDA not reported male not reported -26616 C3L-00625 PDA not reported female not reported -12736 -C3L-00629 CM not hispanic or latino male white -27537 -C3L-00631 GBM not hispanic or latino male white -23899 C3L-00640 PDA not hispanic or latino female white -21667 -C3L-00671 GBM not hispanic or latino male white -28146 C3L-00674 GBM not hispanic or latino male white -16667 C3L-00677 GBM not hispanic or latino female white -25562 C3L-00765 CCRCC not reported female white -22351 @@ -148,7 +131,6 @@ C3L-00815 CCRCC not reported female white -28832 C3L-00817 CCRCC not reported male white -29511 C3L-00819 PDA not hispanic or latino male white -27104 C3L-00881 PDA not hispanic or latino male white -29330 -C3L-00885 PDA not hispanic or latino male white -25999 C3L-00893 LUAD hispanic or latino male Unknown -26209 C3L-00898 UCEC hispanic or latino female white -20081 C3L-00902 CCRCC not hispanic or latino female white -25512 @@ -164,9 +146,7 @@ C3L-00921 UCEC not hispanic or latino female white -24157 C3L-00923 LSCC not hispanic or latino female white -25994 C3L-00927 LSCC not hispanic or latino male white -27187 C3L-00928 PDA not hispanic or latino female white -21418 -C3L-00930 UCEC not hispanic or latino female white -26559 C3L-00932 UCEC not hispanic or latino female white -24510 -C3L-00935 UCEC not hispanic or latino female white -27315 C3L-00938 UCEC not reported female white -19395 C3L-00942 UCEC not reported female white -23631 C3L-00943 UCEC not reported female white -23047 @@ -252,7 +232,6 @@ C3L-01279 CCRCC not hispanic or latino female asian -25141 C3L-01281 CCRCC not hispanic or latino male white -24243 C3L-01282 UCEC not hispanic or latino female white -23414 C3L-01283 CCRCC hispanic or latino male white -13526 -C3L-01284 UCEC not hispanic or latino female asian -18243 C3L-01285 LSCC not hispanic or latino male white -19737 C3L-01286 CCRCC not hispanic or latino male white -21429 C3L-01287 CCRCC not hispanic or latino male white -22045 @@ -287,7 +266,6 @@ C3L-01465 CCRCC not reported male white -24603 C3L-01467 CCRCC not reported male white -25602 C3L-01469 CCRCC not reported male white -21798 C3L-01470 CCRCC not reported male not reported -18613 -C3L-01551 SAR not reported male white -27383 C3L-01553 CCRCC not reported male white -21899 C3L-01557 CCRCC not reported male black or african american -18652 C3L-01558 CCRCC not reported male not reported -18688 @@ -296,7 +274,6 @@ C3L-01598 PDA not hispanic or latino female white -26697 C3L-01599 UCEC not hispanic or latino female white -24089 C3L-01601 SAR not hispanic or latino male black or african american -24942 C3L-01603 CCRCC not hispanic or latino male white -23226 -C3L-01604 UCEC not hispanic or latino female white -24177 C3L-01606 LSCC not hispanic or latino male white -24376 C3L-01607 CCRCC not hispanic or latino male white -30462 C3L-01631 UCEC not hispanic or latino female white -20745 @@ -338,7 +315,6 @@ C3L-01864 UCEC not hispanic or latino female white -29568 C3L-01865 CCRCC not hispanic or latino female black or african american -26260 C3L-01869 CCRCC not hispanic or latino female white -20066 C3L-01882 CCRCC not hispanic or latino male white -17820 -C3L-01883 SAR not hispanic or latino male white -32872 C3L-01884 LSCC not hispanic or latino male white -27320 C3L-01885 CCRCC not hispanic or latino male white -24752 C3L-01887 GBM not hispanic or latino male white -17887 @@ -559,9 +535,6 @@ C3L-03506 AML not reported female not reported -17885 C3L-03508 AML not reported female not reported -27564 C3L-03510 AML not reported male not reported -18904 C3L-03513 PDA Unknown female Unknown null -C3L-03547 GBM not reported female not reported -6614 -C3L-03557 GBM not reported female not reported -21273 -C3L-03588 GBM not reported male not reported -20635 C3L-03589 UCEC not hispanic or latino female white -21871 C3L-03622 PDA not reported female not reported -26464 C3L-03624 PDA not reported female not reported -25430 @@ -680,9 +653,6 @@ C3L-04792 LSCC not reported male not reported -27365 C3L-04795 GBM not reported male not reported -13503 C3L-04804 LSCC not reported male not reported -27687 C3L-04808 LSCC not reported female not reported -22907 -C3L-04817 GBM not reported female not reported -19401 -C3L-04819 GBM not reported male not reported -21001 -C3L-04838 GBM not reported female not reported -7050 C3L-04844 HNSCC not reported female not reported -22268 C3L-04848 PDA not reported female not reported -26284 C3L-04849 HNSCC not reported male not reported -23099 @@ -815,6 +785,7 @@ C3L-06357 AML not reported male not reported -22055 C3L-06361 AML not reported male not reported -25154 C3L-06364 AML not reported male not reported -17216 C3L-06367 AML not reported female not reported -14670 +C3L-06368 AML not reported female not reported -18259 C3L-06369 AML not reported male not reported -27521 C3L-06374 AML not reported female not reported -25791 C3L-06386 AML not reported male not reported -24136 @@ -866,7 +837,6 @@ C3N-00155 UCEC not reported female not reported -20946 C3N-00167 LUAD not reported male not reported -23543 C3N-00168 CCRCC not reported male not reported -17349 C3N-00169 LUAD not reported male not reported -21005 -C3N-00171 SAR not reported female not reported -11866 C3N-00175 LUAD not reported male not reported -26470 C3N-00177 CCRCC not reported male not reported -19161 C3N-00179 CM not reported male not reported -25370 @@ -893,7 +863,6 @@ C3N-00294 LUAD not reported male not reported -21155 C3N-00295 HNSCC not reported female not reported -19751 C3N-00297 HNSCC not reported male not reported -25254 C3N-00299 HNSCC not reported male not reported -19881 -C3N-00300 HNSCC not reported male not reported -23078 C3N-00302 PDA not reported male not reported -21532 C3N-00303 PDA not reported male not reported -24091 C3N-00305 CCRCC not reported female not reported -21957 @@ -922,17 +891,12 @@ C3N-00340 UCEC not reported female not reported -22158 C3N-00377 UCEC not reported female not reported -23630 C3N-00379 UCEC not reported female not reported -15271 C3N-00380 CCRCC not reported female not reported -20938 -C3N-00382 CM not reported female not reported -27144 C3N-00383 UCEC not reported female not reported -22259 -C3N-00384 CM not reported female not reported -19551 -C3N-00385 CM not reported male not reported -24448 C3N-00386 UCEC not reported female not reported -16190 C3N-00388 UCEC not reported female not reported -21570 C3N-00389 UCEC not reported female not reported -22951 C3N-00390 CCRCC not reported male not reported -21263 -C3N-00432 CM not reported male not reported -22499 C3N-00433 LUAD not reported male not reported -21129 -C3N-00434 CM not reported female not reported -24726 C3N-00435 CCRCC not reported male not reported -26583 C3N-00436 PDA not reported female not reported -25422 C3N-00437 CCRCC not reported female not reported -25495 @@ -974,7 +938,6 @@ C3N-00577 CCRCC not reported male not reported -26555 C3N-00578 LUAD not reported male not reported -17824 C3N-00579 LUAD not reported male not reported -24755 C3N-00580 LUAD not reported male not reported -20730 -C3N-00645 SAR not reported female not reported -26999 C3N-00646 CCRCC not reported female not reported -21144 C3N-00647 CCRCC not reported female not reported null C3N-00651 AML not reported female not reported -22186 @@ -1012,14 +975,11 @@ C3N-00834 CCRCC not reported male not reported -23908 C3N-00835 CCRCC not reported female not reported -24933 C3N-00836 UCEC not reported female not reported -27509 C3N-00839 LSCC not reported male not reported -24756 -C3N-00843 SAR not reported male not reported -27120 C3N-00846 HNSCC not reported male not reported -24608 C3N-00847 UCEC not reported female not reported -23757 C3N-00848 UCEC not reported female not reported -24214 C3N-00850 UCEC not reported female not reported -23707 C3N-00852 CCRCC not reported male not reported -22718 -C3N-00853 SAR not reported female not reported -24065 -C3N-00855 SAR not reported female not reported -14764 C3N-00857 HNSCC not reported male not reported -23545 C3N-00858 UCEC not reported female not reported -24019 C3N-00859 UCEC not reported female not reported -22165 @@ -1033,7 +993,6 @@ C3N-00954 PDA not hispanic or latino male white -30720 C3N-00957 PDA not hispanic or latino male white -27089 C3N-00958 CCRCC not hispanic or latino female black or african american -24567 C3N-00959 LUAD not hispanic or latino male white -24361 -C3N-01001 UCEC not reported female not reported -26444 C3N-01003 UCEC not reported female not reported -26984 C3N-01007 UCEC not reported female not reported -21777 C3N-01008 UCEC not reported female not reported -24919 @@ -1101,7 +1060,6 @@ C3N-01339 HNSCC not reported female not reported -25041 C3N-01340 HNSCC not reported male not reported -26376 C3N-01341 UCEC not reported female not reported -23404 C3N-01342 UCEC not reported female not reported -24941 -C3N-01343 UCEC not reported female not reported -25784 C3N-01344 UCEC not reported female not reported -29270 C3N-01346 UCEC not reported female not reported -23139 C3N-01349 UCEC not reported female not reported -28217 @@ -1145,13 +1103,10 @@ C3N-01518 GBM not reported female not reported -26312 C3N-01520 UCEC not reported female not reported -25521 C3N-01521 UCEC not reported female not reported -27702 C3N-01522 CCRCC not reported male not reported -29350 -C3N-01523 SAR not reported female not reported -24789 C3N-01524 CCRCC not reported male not reported -22558 C3N-01525 UCEC not reported female not reported -28217 C3N-01526 UCEC not reported female not reported -24258 C3N-01529 UCEC not reported female not reported -25559 -C3N-01532 SAR not reported female not reported -21175 -C3N-01534 SAR not reported male not reported -23563 C3N-01535 SAR not reported female not reported -28280 C3N-01536 CCRCC not reported male not reported -23816 C3N-01537 UCEC not reported female not reported -27304 @@ -1197,7 +1152,6 @@ C3N-01815 GBM not reported female not reported -25973 C3N-01816 GBM not reported female not reported -19634 C3N-01817 GBM not reported female not reported -22797 C3N-01818 GBM not reported male not reported -22156 -C3N-01821 UCEC not reported female not reported -24345 C3N-01823 LUAD not reported male not reported -23322 C3N-01825 UCEC not reported female not reported -25659 C3N-01828 CCRCC not reported female not reported -24734 @@ -1254,8 +1208,6 @@ C3N-02015 CCRCC not hispanic or latino male white -19939 C3N-02027 UCEC not reported female not reported -20045 C3N-02028 UCEC not reported female not reported -24954 C3N-02030 UCEC not reported female not reported -22893 -C3N-02034 SAR not reported male not reported -24044 -C3N-02038 SAR not reported male not reported -19331 C3N-02061 UCEC not reported female not reported -24760 C3N-02062 UCEC not reported female not reported -24730 C3N-02063 CCRCC not reported male not reported -18159 @@ -1515,7 +1467,6 @@ C3N-03212 LUAD not reported female not reported -25659 C3N-03222 LUAD not reported male not reported -26630 C3N-03225 LUAD not reported male not reported -20775 C3N-03226 HNSCC not reported male not reported -19938 -C3N-03230 SAR not reported female not reported -26559 C3N-03233 LUAD not reported male not reported -24895 C3N-03238 LUAD not reported male not reported -17380 C3N-03415 UCEC not reported female not reported -31332