From 75295bdd0a69a25f4b65eaca70d1a094db67adaf Mon Sep 17 00:00:00 2001 From: "Matthew A. Wyczalkowski" Date: Wed, 30 Sep 2020 17:05:38 -0500 Subject: [PATCH] Results of discovery run discover.20200929 * Working directory: mammoth:/home/mwyczalk_test/Projects/CPTAC3/discovery/discover.20200929 --- CPTAC3.Catalog.Summary.dat | 394 +++++++++++------------ CPTAC3.Catalog.dat | 642 +++++++++++++++++++++++++++++++++++++ CPTAC3.Demographics.dat | 4 - 3 files changed, 839 insertions(+), 201 deletions(-) diff --git a/CPTAC3.Catalog.Summary.dat b/CPTAC3.Catalog.Summary.dat index 7e0d86d..e089bc8 100644 --- a/CPTAC3.Catalog.Summary.dat +++ b/CPTAC3.Catalog.Summary.dat @@ -42,7 +42,7 @@ C3L-00096 CCRCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRN C3L-00097 CCRCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3L-00098 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-00102 PDA WGS.hg19 T N A WXS.hg19 TT N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 TT N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3L-00103 CCRCC WGS.hg19 TTT N A WXS.hg19 TT N A RNA.fq TTTTTT AA miRNA.fq TT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT +C3L-00103 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT C3L-00104 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-00136 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-00137 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT @@ -111,7 +111,7 @@ C3L-00364 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-00365 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-00367 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-00368 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3L-00369 CCRCC WGS.hg19 TTT N A WXS.hg19 TT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT +C3L-00369 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT C3L-00391 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-00392 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-00393 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -136,7 +136,7 @@ C3L-00413 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq C3L-00414 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-00415 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-00416 CCRCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3L-00418 CCRCC WGS.hg19 TTT N A WXS.hg19 TT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT +C3L-00418 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT C3L-00421 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-00422 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-00423 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -151,7 +151,7 @@ C3L-00443 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-00444 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-00445 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-00446 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3L-00447 CCRCC WGS.hg19 TTT N A WXS.hg19 T N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT +C3L-00447 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT C3L-00448 CCRCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3L-00449 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-00452 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -194,8 +194,8 @@ C3L-00564 SAR WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T C3L-00566 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-00567 SAR WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3L-00568 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3L-00581 CCRCC WGS.hg19 TTT N A WXS.hg19 T N A RNA.fq TTTTTT AA miRNA.fq TT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT -C3L-00583 CCRCC WGS.hg19 TTT N A WXS.hg19 TT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT +C3L-00581 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT +C3L-00583 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT C3L-00586 UCEC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3L-00589 PDA WGS.hg19 T N A WXS.hg19 TT N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 TT N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-00591 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT @@ -207,7 +207,7 @@ C3L-00602 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-00603 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-00604 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-00605 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT -C3L-00606 CCRCC WGS.hg19 TTT N A WXS.hg19 T N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT +C3L-00606 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT C3L-00607 CCRCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3L-00608 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-00609 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -306,7 +306,7 @@ C3L-00902 CCRCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRN C3L-00904 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-00905 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-00906 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-00907 CCRCC WGS.hg19 TTT N A WXS.hg19 T N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT AA +C3L-00907 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT AA C3L-00908 CCRCC WGS.hg19 TT N A WXS.hg19 TT N A RNA.fq TTTT AA miRNA.fq T A WGS.hg38 TT N A WXS.hg38 TT N A RNA.hg38 TTTTTT AAA miRNA.hg38 T A MethArray TTTT C3L-00910 CCRCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-00913 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA @@ -435,7 +435,7 @@ C3L-01223 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-01225 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-01227 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-01230 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-01232 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq TT WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-01232 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq TT WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C3L-01233 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-01237 HNSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-01245 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -465,8 +465,8 @@ C3L-01282 UCEC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA C3L-01283 CCRCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-01284 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-01285 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3L-01286 CCRCC WGS.hg19 TTT N A WXS.hg19 T N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT AA -C3L-01287 CCRCC WGS.hg19 TTT N A WXS.hg19 TT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT +C3L-01286 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT AA +C3L-01287 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT C3L-01288 CCRCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-01289 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-01291 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -568,11 +568,11 @@ C3L-01599 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq C3L-01600 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-01601 SAR WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3L-01602 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-01603 CCRCC WGS.hg19 TTT N A WXS.hg19 T N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT +C3L-01603 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT C3L-01604 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-01605 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-01606 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3L-01607 CCRCC WGS.hg19 TTT N A WXS.hg19 T N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT +C3L-01607 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT C3L-01609 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-01610 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-01631 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT @@ -655,12 +655,12 @@ C3L-01832 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-01833 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq TT WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-01834 GBM WGS.hg19 N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-01835 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-01836 CCRCC WGS.hg19 TTT N A WXS.hg19 T N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT AA +C3L-01836 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT AA C3L-01837 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-01838 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-01839 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C3L-01840 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT -C3L-01861 CCRCC WGS.hg19 TTT N A WXS.hg19 T N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT +C3L-01861 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT C3L-01862 LUAD WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-01864 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-01865 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -849,7 +849,7 @@ C3L-02386 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-02387 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-02389 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-02390 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-02392 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT +C3L-02392 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-02394 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-02395 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-02396 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -945,8 +945,8 @@ C3L-02613 PDA WGS.hg19 T N A WXS.hg19 TT N A RNA.fq TT AA miRNA C3L-02614 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-02615 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-02616 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3L-02617 HNSCC WGS.hg19 T N WXS.hg19 TT N A RNA.fq TTTT AA miRNA.fq TT A WGS.hg38 T WXS.hg38 TT N A RNA.hg38 TTTTTT AAA miRNA.hg38 TT A MethArray TT -C3L-02618 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-02617 HNSCC WGS.hg19 T N WXS.hg19 TT N A RNA.fq TTTT AA miRNA.fq TT A WGS.hg38 T N WXS.hg38 TT N A RNA.hg38 TTTTTT AAA miRNA.hg38 TT A MethArray TT +C3L-02618 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-02619 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-02620 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-02621 HNSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA @@ -962,7 +962,7 @@ C3L-02630 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-02641 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-02642 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-02643 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3L-02644 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-02644 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-02646 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-02647 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-02648 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA @@ -977,7 +977,7 @@ C3L-02657 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-02658 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-02660 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-02661 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3L-02662 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-02662 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C3L-02663 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-02665 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-02666 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1169,13 +1169,13 @@ C3L-03365 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq W C3L-03366 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03367 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03371 PDA WGS.hg19 T N WXS.hg19 T N A RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT miRNA.hg38 T MethArray TT AA -C3L-03372 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-03372 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-03374 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03377 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03378 HNSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-03381 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03382 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-03385 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-03385 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C3L-03387 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-03388 PDA WGS.hg19 T N WXS.hg19 T N A RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT miRNA.hg38 T MethArray TT AA C3L-03389 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1232,11 +1232,11 @@ C3L-03550 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-03551 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03552 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03553 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-03554 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-03554 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-03555 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-03557 GBM WGS.hg19 T N WXS.hg19 N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-03557 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-03558 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-03559 GBM WGS.hg19 T N WXS.hg19 N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-03559 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-03560 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03581 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03582 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1245,7 +1245,7 @@ C3L-03584 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-03585 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03586 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03587 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-03588 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-03588 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-03589 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-03590 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03591 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1312,11 +1312,11 @@ C3L-03730 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-03731 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03732 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03733 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-03735 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-03735 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-03736 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03737 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03739 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-03740 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-03740 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-03741 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03743 PDA WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-03744 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT @@ -1354,12 +1354,12 @@ C3L-03977 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-03978 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03980 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03981 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-03982 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq TT A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-03982 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq TT A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 A MethArray TT AA C3L-03983 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03984 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-03985 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-03986 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-03987 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-03987 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-03988 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03989 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-03990 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1383,9 +1383,9 @@ C3L-04032 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-04033 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-04034 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04035 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04036 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-04036 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-04037 LUAD WGS.hg19 T N WXS.hg19 T N RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT -C3L-04038 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-04038 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-04039 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04040 LUAD WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-04049 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1399,26 +1399,26 @@ C3L-04074 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-04075 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04076 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04077 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04079 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04079 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04080 PDA WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-04081 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04082 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3L-04083 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-04082 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3L-04083 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-04084 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-04085 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04086 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04089 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04090 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-04090 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-04101 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04201 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04202 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04203 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04204 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04212 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04213 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-04213 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-04214 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04215 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04216 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04216 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT AA C3L-04231 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04236 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04238 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1443,9 +1443,9 @@ C3L-04332 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-04333 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04334 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04335 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04336 LSCC WGS.hg19 T N WXS.hg19 T A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04336 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04338 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04339 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-04339 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C3L-04340 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04341 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04342 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1460,15 +1460,15 @@ C3L-04354 HNSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA C3L-04355 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04357 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04358 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04359 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-04359 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-04360 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04361 LSCC WGS.hg19 T NN WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-04362 GBM WGS.hg19 T N WXS.hg19 N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3L-04361 LSCC WGS.hg19 T NN WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-04362 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray C3L-04363 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04364 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04365 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-04366 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04367 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04367 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04368 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04370 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04371 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1477,19 +1477,19 @@ C3L-04373 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-04374 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04376 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04377 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04378 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-04379 LSCC WGS.hg19 T N WXS.hg19 N RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04378 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-04379 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04380 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04391 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-04392 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04401 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04402 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-04404 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04402 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT AA +C3L-04404 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04405 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04407 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04408 LSCC WGS.hg19 T N WXS.hg19 T A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-04409 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-04410 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04408 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-04409 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT AA +C3L-04410 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04472 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04473 PDA WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-04474 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1546,9 +1546,9 @@ C3L-04533 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq W C3L-04534 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04535 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04536 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04537 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-04537 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-04538 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04539 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-04539 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-04540 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04541 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04542 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1564,9 +1564,9 @@ C3L-04722 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-04723 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04725 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04726 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04728 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-04728 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-04730 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04731 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-04731 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-04732 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04733 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04736 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1576,10 +1576,10 @@ C3L-04741 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq W C3L-04742 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04743 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04744 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04746 LSCC WGS.hg19 T N WXS.hg19 N RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04746 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04747 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04748 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04749 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04749 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04750 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04751 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04752 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1602,31 +1602,31 @@ C3L-04781 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-04783 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04784 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04785 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04786 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04786 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04787 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04788 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04789 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04790 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04791 HNSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT -C3L-04792 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04792 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04794 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04795 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3L-04795 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray C3L-04796 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04800 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04801 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04803 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04804 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04804 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04805 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04807 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04808 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04808 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04809 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04810 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04814 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04815 GBM WGS.hg19 T N WXS.hg19 N RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-04815 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C3L-04816 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04817 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-04817 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-04818 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04819 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-04819 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-04820 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04821 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04825 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1640,12 +1640,12 @@ C3L-04834 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-04835 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04836 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04837 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04838 GBM WGS.hg19 T N WXS.hg19 RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-04838 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-04839 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04840 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04841 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04842 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04843 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-04843 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-04844 HNSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3L-04845 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04846 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1655,45 +1655,45 @@ C3L-04850 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-04851 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04852 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04853 PDA WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT -C3L-04854 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04854 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04855 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04856 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04856 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT AA C3L-04858 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04859 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04861 LSCC WGS.hg19 T N WXS.hg19 N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04861 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04862 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04864 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04866 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04866 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04867 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04868 LSCC WGS.hg19 T N WXS.hg19 N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04868 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04870 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04871 LSCC WGS.hg19 T N WXS.hg19 N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-04872 LSCC WGS.hg19 T N WXS.hg19 N RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-04873 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-04874 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04871 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-04872 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-04873 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-04874 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04875 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04876 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04877 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04878 LSCC WGS.hg19 T N WXS.hg19 N RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-04880 LSCC WGS.hg19 T N WXS.hg19 T A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04878 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-04880 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04881 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04882 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04883 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04883 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04884 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04886 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04887 LSCC WGS.hg19 T NN WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-04888 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-04889 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-04912 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq TT A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04887 LSCC WGS.hg19 T NN WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-04888 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-04889 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-04912 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq TT A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 A MethArray TT AA C3L-04913 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04915 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04916 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04916 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04917 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04918 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04919 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04920 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-04921 LSCC WGS.hg19 T N WXS.hg19 N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-04922 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-04921 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-04922 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-04923 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04924 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-04925 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1710,9 +1710,9 @@ C3L-04966 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-05011 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05018 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05019 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-05020 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-05020 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-05021 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-05022 LSCC WGS.hg19 TT N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-05022 LSCC WGS.hg19 TT N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-05023 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05024 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05025 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1741,24 +1741,24 @@ C3L-05058 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-05059 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05060 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05121 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-05145 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-05148 LSCC WGS.hg19 T N WXS.hg19 N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-05145 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-05148 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-05149 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-05150 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-05150 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-05171 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-05172 LSCC WGS.hg19 T N WXS.hg19 N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-05172 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-05173 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05174 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05175 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-05176 LSCC WGS.hg19 T NN WXS.hg19 N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-05176 LSCC WGS.hg19 T NN WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-05209 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05210 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-05212 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-05221 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-05212 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-05221 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-05222 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05223 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05224 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-05225 LSCC WGS.hg19 T NN WXS.hg19 T N RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-05225 LSCC WGS.hg19 T NN WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-05226 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05228 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05229 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1803,7 +1803,7 @@ C3L-05339 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-05342 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05351 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05352 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-05369 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-05369 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-05381 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05382 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05383 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1815,24 +1815,24 @@ C3L-05388 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-05389 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05390 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05391 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-05392 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-05393 LSCC WGS.hg19 T NN WXS.hg19 T N A RNA.fq TT AA miRNA.fq TT A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-05394 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT AA miRNA.fq TT A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-05392 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-05393 LSCC WGS.hg19 T NN WXS.hg19 T N A RNA.fq TT AA miRNA.fq TT A WGS.hg38 T WXS.hg38 RNA.hg38 miRNA.hg38 A MethArray TT AA +C3L-05394 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq TT A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 A MethArray TT AA C3L-05395 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05396 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-05397 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-05398 LSCC WGS.hg19 TT N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-05399 LSCC WGS.hg19 T N WXS.hg19 T A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-05411 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-05417 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-05420 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-05397 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-05398 LSCC WGS.hg19 TT N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-05399 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-05411 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-05417 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-05420 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-05421 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-05422 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq TT A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-05423 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-05422 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq TT A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 A MethArray TT AA +C3L-05423 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-05424 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05426 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-05427 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3L-05428 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-05427 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3L-05428 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT AA C3L-05429 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05430 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05441 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1880,7 +1880,7 @@ C3L-05562 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-05563 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05564 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05565 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-05571 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-05571 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-05572 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05573 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05574 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1916,7 +1916,7 @@ C3L-05677 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-05681 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05685 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05689 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-05693 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-05693 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3L-05707 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05708 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05709 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -1942,30 +1942,30 @@ C3L-05746 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3L-05779 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05782 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05813 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-05848 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3L-05849 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3L-05848 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3L-05849 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3L-05870 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-05872 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3L-06169 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3L-06169 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3N-00000 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00147 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-00148 CCRCC WGS.hg19 TTTT N A WXS.hg19 TT N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTTTT -C3N-00149 CCRCC WGS.hg19 TTT N A WXS.hg19 TT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT AA -C3N-00150 CCRCC WGS.hg19 TTTT N A WXS.hg19 TT N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTTTT AA +C3N-00148 CCRCC WGS.hg19 TTTT N A WXS.hg19 TTTT N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTTTT +C3N-00149 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT AA +C3N-00150 CCRCC WGS.hg19 TTTT N A WXS.hg19 TTTT N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTTTT AA C3N-00151 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-00153 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00154 CCRCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-00155 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-00166 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00167 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3N-00168 CCRCC WGS.hg19 TTTT N A WXS.hg19 TTT N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTTTT +C3N-00168 CCRCC WGS.hg19 TTTT N A WXS.hg19 TTTT N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTTTT C3N-00169 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-00170 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00171 SAR WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3N-00173 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00175 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-00176 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-00177 CCRCC WGS.hg19 TTT N A WXS.hg19 T N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT +C3N-00177 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT C3N-00179 CM WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3N-00180 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-00191 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -2000,7 +2000,7 @@ C3N-00222 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-00223 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3N-00227 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00228 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-00229 LSCC WGS.hg19 T N WXS.hg19 N RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-00229 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT C3N-00236 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00238 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00242 CCRCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA @@ -2030,17 +2030,17 @@ C3N-00306 HNSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA C3N-00307 HNSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3N-00308 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00309 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT -C3N-00310 CCRCC WGS.hg19 TTTT N A WXS.hg19 TT N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTTTT +C3N-00310 CCRCC WGS.hg19 TTTT N A WXS.hg19 TTTT N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTTTT C3N-00311 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-00312 CCRCC WGS.hg19 TTTT N A WXS.hg19 TTT N A RNA.fq TTTTTTTT miRNA.fq TTTT WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT miRNA.hg38 T MethArray TTTTTTTT +C3N-00312 CCRCC WGS.hg19 TTTT N A WXS.hg19 TTTT N A RNA.fq TTTTTTTT miRNA.fq TTTT WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT miRNA.hg38 T MethArray TTTTTTTT C3N-00313 CCRCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT -C3N-00314 CCRCC WGS.hg19 TTTT N A WXS.hg19 TT N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT +C3N-00314 CCRCC WGS.hg19 TTTT N A WXS.hg19 TTTT N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT C3N-00315 CCRCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-00316 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-00317 CCRCC WGS.hg19 TT N A WXS.hg19 T N A RNA.fq TTTT miRNA.fq TT WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT miRNA.hg38 T MethArray TTTT +C3N-00317 CCRCC WGS.hg19 TT N A WXS.hg19 TT N A RNA.fq TTTT miRNA.fq TT WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT miRNA.hg38 T MethArray TTTT C3N-00318 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00319 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-00320 CCRCC WGS.hg19 TTTT N A WXS.hg19 TT N A RNA.fq TTTTTTTT miRNA.fq TTTT WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT miRNA.hg38 T MethArray TTTTTTTT +C3N-00320 CCRCC WGS.hg19 TTTT N A WXS.hg19 TTTT N A RNA.fq TTTTTTTT miRNA.fq TTTT WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT miRNA.hg38 T MethArray TTTTTTTT C3N-00321 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-00322 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-00323 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT @@ -2075,14 +2075,14 @@ C3N-00386 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq C3N-00387 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00388 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-00389 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT -C3N-00390 CCRCC WGS.hg19 TTTT N A WXS.hg19 T N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTTTT +C3N-00390 CCRCC WGS.hg19 TTTT N A WXS.hg19 TTTT N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTTTT C3N-00431 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00432 CM WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T MethArray TT C3N-00433 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3N-00434 CM WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3N-00435 CCRCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3N-00436 PDA WGS.hg19 T N A WXS.hg19 TT N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 TT N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3N-00437 CCRCC WGS.hg19 TTT N A WXS.hg19 T N A RNA.fq TTTTTT miRNA.fq TT WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT miRNA.hg38 T MethArray TTTTTT +C3N-00437 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT miRNA.fq TT WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT miRNA.hg38 T MethArray TTTTTT C3N-00438 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00439 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00440 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -2104,7 +2104,7 @@ C3N-00490 AML WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-00491 CCRCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3N-00492 CCRCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT miRNA.fq T WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-00493 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-00494 CCRCC WGS.hg19 TTT N A WXS.hg19 T N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT +C3N-00494 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT C3N-00495 CCRCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3N-00496 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00497 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA @@ -2143,7 +2143,7 @@ C3N-00559 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA C3N-00560 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-00571 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00572 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3N-00573 CCRCC WGS.hg19 TTTT N A WXS.hg19 T N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTTTT +C3N-00573 CCRCC WGS.hg19 TTTT N A WXS.hg19 TTTT N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTTTT C3N-00574 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-00575 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00576 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -2156,7 +2156,7 @@ C3N-00642 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-00643 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00644 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00645 SAR WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT -C3N-00646 CCRCC WGS.hg19 TTTT N A WXS.hg19 T N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTTTT +C3N-00646 CCRCC WGS.hg19 TTTT N A WXS.hg19 TTTT N A RNA.fq TTTTTTTT AA miRNA.fq TTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTTTT C3N-00647 CCRCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3N-00648 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00649 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -2194,7 +2194,7 @@ C3N-00721 CCRCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA C3N-00729 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-00731 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00732 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT -C3N-00733 CCRCC WGS.hg19 TTT N A WXS.hg19 TT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT AA +C3N-00733 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT AA C3N-00734 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-00735 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00736 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -2249,7 +2249,7 @@ C3N-00847 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq C3N-00848 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-00849 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00850 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT -C3N-00852 CCRCC WGS.hg19 TTT N A WXS.hg19 T N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT AA +C3N-00852 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT AA C3N-00853 SAR WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3N-00854 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00855 SAR WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT @@ -2280,7 +2280,7 @@ C3N-00879 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-00880 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-00951 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00952 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-00953 CCRCC WGS.hg19 TTT N WXS.hg19 T N RNA.fq TTTTTT miRNA.fq TT WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TTTTTT +C3N-00953 CCRCC WGS.hg19 TTT N WXS.hg19 TTT N RNA.fq TTTTTT miRNA.fq TT WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TTTTTT C3N-00954 PDA WGS.hg19 TT N A WXS.hg19 TT N A RNA.fq TT AA miRNA.fq T A WGS.hg38 TT N A WXS.hg38 TT N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-00955 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-00957 PDA WGS.hg19 T N A WXS.hg19 TT N A RNA.fq TT miRNA.fq T WGS.hg38 T N A WXS.hg38 TT N A RNA.hg38 TTT miRNA.hg38 T MethArray TT AA @@ -2364,7 +2364,7 @@ C3N-01195 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-01196 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-01197 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-01198 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-01200 CCRCC WGS.hg19 TTTTT N A WXS.hg19 TTT N A RNA.fq TTTTTTTTTT AA miRNA.fq TTTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTTTTTT AA +C3N-01200 CCRCC WGS.hg19 TTTTT N A WXS.hg19 TTTTT N A RNA.fq TTTTTTTTTT AA miRNA.fq TTTTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTTTTTT AA C3N-01211 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-01212 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-01213 CCRCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT @@ -2491,7 +2491,7 @@ C3N-01518 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T C3N-01519 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-01520 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 MethArray TT C3N-01521 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT -C3N-01522 CCRCC WGS.hg19 TTT N A WXS.hg19 TT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT +C3N-01522 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT C3N-01523 SAR WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3N-01524 CCRCC WGS.hg19 TTT N A WXS.hg19 TTT N A RNA.fq TTTTTT AA miRNA.fq TTT A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TTTTTT C3N-01525 UCEC WGS.hg19 TTTT N A WXS.hg19 TTTTTTTTTTT N A RNA.fq TTTTTTTTTTTT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT @@ -2556,8 +2556,8 @@ C3N-01763 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TTTT miRNA.f C3N-01764 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-01765 UCEC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3N-01766 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT -C3N-01767 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3N-01768 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3N-01767 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3N-01768 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3N-01789 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-01790 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-01792 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -2598,7 +2598,7 @@ C3N-01845 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq W C3N-01846 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-01847 UCEC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3N-01848 UCEC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT -C3N-01849 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-01849 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-01850 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TTTT C3N-01851 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-01852 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT @@ -2686,7 +2686,7 @@ C3N-02026 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq W C3N-02027 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02028 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02029 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-02030 UCEC WGS.hg19 TTTTT N WXS.hg19 TTTTTTTTTTTTT N RNA.fq TTTTTTTTTTTTTT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT +C3N-02030 UCEC WGS.hg19 TTTTTTT N WXS.hg19 TTTTTTTTTTTTT N RNA.fq TTTTTTTTTTTTTT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02031 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02032 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02033 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -2776,7 +2776,7 @@ C3N-02255 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T C3N-02256 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02257 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02258 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-02259 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-02259 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-02260 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02261 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02262 CCRCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT @@ -2802,7 +2802,7 @@ C3N-02282 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA. C3N-02283 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02284 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02285 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3N-02286 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-02286 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-02287 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02288 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-02289 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA @@ -2912,7 +2912,7 @@ C3N-02595 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq C3N-02596 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02597 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02598 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT -C3N-02599 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-02599 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-02631 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02632 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02633 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -2933,14 +2933,14 @@ C3N-02677 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-02678 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02679 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02680 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-02681 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3N-02682 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-02683 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-02681 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-02682 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray +C3N-02683 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-02684 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02685 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02686 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02687 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-02688 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3N-02688 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3N-02689 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02691 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02692 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -2968,7 +2968,7 @@ C3N-02723 CCRCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA C3N-02724 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02725 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-02726 CCRCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT -C3N-02727 HNSCC WGS.hg19 T N WXS.hg19 TT N A RNA.fq TTTT AA miRNA.fq TT A WGS.hg38 T WXS.hg38 TT N A RNA.hg38 TTTTTT AAA miRNA.hg38 TT A MethArray TT +C3N-02727 HNSCC WGS.hg19 T N WXS.hg19 TT N A RNA.fq TTTT AA miRNA.fq TT A WGS.hg38 T N WXS.hg38 TT N A RNA.hg38 TTTTTT AAA miRNA.hg38 TT A MethArray TT C3N-02728 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-02729 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-02730 HNSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT @@ -3079,9 +3079,9 @@ C3N-02997 PDA WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq C3N-02998 PDA WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-02999 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03000 PDA WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray -C3N-03001 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-03001 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-03002 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-03003 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-03003 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-03004 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03005 UCEC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-03006 PDA WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT @@ -3103,7 +3103,7 @@ C3N-03021 CCRCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA C3N-03022 CCRCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03023 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03024 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-03025 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-03025 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-03026 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03027 HNSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-03028 HNSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA @@ -3254,11 +3254,11 @@ C3N-03443 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-03444 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03445 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03447 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-03448 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3N-03449 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-03448 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3N-03449 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-03451 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-03452 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3N-03453 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-03452 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3N-03453 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-03455 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03456 HNSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C3N-03457 HNSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT @@ -3266,8 +3266,8 @@ C3N-03458 HNSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq C3N-03459 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03460 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03473 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT -C3N-03480 GBM WGS.hg19 T N WXS.hg19 N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3N-03484 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-03480 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3N-03484 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-03486 LSCC WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT C3N-03487 HNSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-03488 HNSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA @@ -3297,14 +3297,14 @@ C3N-03751 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-03752 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03753 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03754 PDA WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT -C3N-03755 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3N-03756 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3N-03757 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-03755 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3N-03756 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3N-03757 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-03758 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03759 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03760 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03761 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-03762 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3N-03762 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3N-03763 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03764 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-03765 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA @@ -3329,17 +3329,17 @@ C3N-03785 HNSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq C3N-03786 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03787 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03788 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-03789 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-03789 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-03790 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-03791 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-03791 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-03792 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03793 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03794 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03796 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-03797 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3N-03800 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3N-03802 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-03810 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C3N-03797 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3N-03800 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3N-03802 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray +C3N-03810 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray C3N-03835 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03836 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03837 HNSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT AA miRNA.fq A WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT AAA miRNA.hg38 A MethArray TT @@ -3393,7 +3393,7 @@ C3N-03919 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-03920 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03921 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-03922 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-03923 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3N-03923 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3N-03924 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03925 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03926 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -3405,14 +3405,14 @@ C3N-03931 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq W C3N-03932 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-03933 HNSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-03934 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-03935 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3N-03939 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3N-04092 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3N-04094 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3N-04097 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3N-04098 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3N-04100 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3N-04113 GBM WGS.hg19 T N WXS.hg19 RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-03935 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3N-03939 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3N-04092 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3N-04094 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3N-04097 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3N-04098 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3N-04100 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3N-04113 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-04119 PDA WGS.hg19 T N WXS.hg19 T N A RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT miRNA.hg38 T MethArray TT AA C3N-04121 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04122 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -3455,9 +3455,9 @@ C3N-04163 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-04164 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04165 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04166 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-04167 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-04167 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-04168 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA -C3N-04169 LSCC WGS.hg19 T N WXS.hg19 N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3N-04169 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3N-04170 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04171 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04172 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -3498,7 +3498,7 @@ C3N-04295 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-04296 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04297 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04298 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-04312 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-04312 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-04325 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04330 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04382 LUAD WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA @@ -3524,7 +3524,7 @@ C3N-04452 PDA WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-04453 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04454 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04456 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-04457 LSCC WGS.hg19 T N WXS.hg19 N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3N-04457 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3N-04458 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04459 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04601 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -3533,7 +3533,7 @@ C3N-04604 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-04605 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04606 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04608 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-04609 LSCC WGS.hg19 T N WXS.hg19 N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3N-04609 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3N-04611 HNSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-04613 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04614 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -3564,20 +3564,20 @@ C3N-04669 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-04670 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04671 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04672 LUAD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-04673 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-04673 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-04674 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04675 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04676 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-04683 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-04683 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-04684 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-04686 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-04686 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-04687 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04688 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04689 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04690 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-04691 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-04691 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-04692 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-04693 GBM WGS.hg19 T N WXS.hg19 N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-04693 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-04694 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04695 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04696 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -3585,14 +3585,14 @@ C3N-04697 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-04698 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04699 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04700 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-04701 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3N-04701 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3N-04702 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04703 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04705 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04706 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04708 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04711 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-04713 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-04713 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-04714 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04715 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-04716 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -3640,9 +3640,9 @@ C3N-05068 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-05069 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05070 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05077 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-05078 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C3N-05079 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3N-05080 LSCC WGS.hg19 T N WXS.hg19 N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-05078 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT +C3N-05079 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3N-05080 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-05082 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05083 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05085 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -3650,7 +3650,7 @@ C3N-05096 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-05097 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05098 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05099 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-05100 LSCC WGS.hg19 T N WXS.hg19 T RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C3N-05100 LSCC WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T MethArray TT C3N-05111 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05112 SAR WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05113 HNSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -3689,18 +3689,18 @@ C3N-05184 LSCC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-05185 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05624 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05627 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-05629 LSCC WGS.hg19 T N WXS.hg19 N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3N-05629 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3N-05630 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05911 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05912 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05913 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-05914 LSCC WGS.hg19 T N WXS.hg19 N RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3N-05915 LSCC WGS.hg19 T N WXS.hg19 N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3N-05914 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3N-05915 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3N-05916 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05917 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05918 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-05923 LSCC WGS.hg19 TT NN WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA -C3N-05929 LSCC WGS.hg19 TT NN WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT AA +C3N-05923 LSCC WGS.hg19 TT NN WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA +C3N-05929 LSCC WGS.hg19 TT NN WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 T A MethArray TT AA C3N-11111 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-22222 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-33333 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray diff --git a/CPTAC3.Catalog.dat b/CPTAC3.Catalog.dat index 0bc18f1..927c6ca 100644 --- a/CPTAC3.Catalog.dat +++ b/CPTAC3.Catalog.dat @@ -843,6 +843,7 @@ C3L-00103.WXS.A C3L-00103 CCRCC WXS tissue_normal CPT0000660009 CPT0000660009.Wh C3L-00103.WXS.A.hg38 C3L-00103 CCRCC WXS tissue_normal CPT0000660009 5e34b40b-83f7-4eb1-b42e-ffde801a6a4c_wxs_gdc_realn.bam 52639862514 BAM NA 1bcb4996-7610-4417-b648-bd9c7a34427e 23bf88201fad4be34640708442b749f9 hg38 Solid Tissue Normal C3L-00103.WXS.N C3L-00103 CCRCC WXS blood_normal CPT0003850002 CPT0003850002.WholeExome.RP-1303.bam 22186536977 BAM NA a5553301-99b3-478a-906f-2ae2158f9522 68a5a6707680b74140822cc1abb0eb70 hg19 Blood Derived Normal C3L-00103.WXS.N.hg38 C3L-00103 CCRCC WXS blood_normal CPT0003850002 b35e7696-f8f2-4fdb-a2e7-e6b4842a4674_gdc_realn.bam 30381554017 BAM NA be832dc4-0367-4d5a-aa34-b0dfafecaa92 66d2fa61d62c4898aea096bbde65ff95 hg38 Blood Derived Normal +C3L-00103.WXS.T C3L-00103 CCRCC WXS tumor CPT0000630006 CPT0000630006.WholeExome.RP-1303.bam 24686273415 BAM NA deadd118-a5ab-4f01-abbb-601a5892aec4 9c91ecdf23540ffc63b0ffe03bafd76f hg19 Primary Tumor C3L-00103.WXS.T C3L-00103 CCRCC WXS tumor CPT0000640008 CPT0000640008.WholeExome.RP-1303.bam 24599619481 BAM NA 327cded6-b729-4655-b620-b0dbb32912e7 9a557c35c9b7d0b0a0eb44d8e9846743 hg19 Primary Tumor C3L-00103.WXS.T C3L-00103 CCRCC WXS tumor CPT0000650006 CPT0000650006.WholeExome.RP-1303.bam 28893546665 BAM NA eb8ef027-b6fa-40b8-a8fc-4a90b6fdc308 45170d8708140c7c2fc47b629544d186 hg19 Primary Tumor C3L-00103.WXS.T.hg38 C3L-00103 CCRCC WXS tumor CPT0000640008 c5a3c455-b1f3-4125-a6f5-401385ab2720_gdc_realn.bam 33390644310 BAM NA 01c91555-2c8b-462a-9814-236ea632e22f a7c494fad70fb0ca406291eaca330976 hg38 Primary Tumor @@ -1487,6 +1488,7 @@ C3L-00369.WXS.A.hg38 C3L-00369 CCRCC WXS tissue_normal CPT0006530009 b757f6ca-1d C3L-00369.WXS.N C3L-00369 CCRCC WXS blood_normal CPT0002660002 CPT0002660002.WholeExome.RP-1303.bam 26355620686 BAM NA 223db7e4-9112-4d30-b77d-8ba2dff20231 2b8668d675278c7daaccf4269379d69f hg19 Blood Derived Normal C3L-00369.WXS.N.hg38 C3L-00369 CCRCC WXS blood_normal CPT0002660002 e01d567c-94df-4606-95ff-13d11ca6d24d_gdc_realn.bam 36084206720 BAM NA b23cc7c4-8879-4c59-9e9c-f8d52cf780a9 d6e36ad62b7038c033146a34649a9c06 hg38 Blood Derived Normal C3L-00369.WXS.T C3L-00369 CCRCC WXS tumor CPT0006440009 CPT0006440009.WholeExome.RP-1303.bam 53308474586 BAM NA 9d1618a7-c76f-4c28-b6d8-1c23384620af 2ff3baa26a3fece4fefda27562d79ab3 hg19 Primary Tumor +C3L-00369.WXS.T C3L-00369 CCRCC WXS tumor CPT0006470006 CPT0006470006.WholeExome.RP-1303.bam 21679163956 BAM NA 2032f147-14db-4e67-9d69-6238e4372c99 fb61b9b6f13137b5fda87f72c1406eb9 hg19 Primary Tumor C3L-00369.WXS.T C3L-00369 CCRCC WXS tumor CPT0006520009 CPT0006520009.WholeExome.RP-1303.bam 26125950770 BAM NA 50d2be36-0819-4205-90a0-c979ece6edc7 a2ade09a0cff9d5a1cf67d1b59b6b9d3 hg19 Primary Tumor C3L-00369.WXS.T.hg38 C3L-00369 CCRCC WXS tumor CPT0006440009 c71f1be9-860c-4cb3-9215-a1a8e78355da_gdc_realn.bam 73052393176 BAM NA da894189-0a3e-4a36-8468-19941f32136a f0d1c7a5c2ff2055c36142e1eddb9d59 hg38 Primary Tumor C3L-00395.MethArray.Green.T C3L-00395 PDA Methylation Array tumor CPT0010020010 202176290095_R06C01_Grn.idat 13676226 IDAT Green dad59a32-aebc-483b-bc24-7fc39ab108b6 c26b1edba06e52259e5dd9d8fd74dc47 NA Primary Tumor @@ -1682,6 +1684,7 @@ C3L-00418.WXS.A.hg38 C3L-00418 CCRCC WXS tissue_normal CPT0006730009 0637f25d-c5 C3L-00418.WXS.N C3L-00418 CCRCC WXS blood_normal CPT0002730002 CPT0002730002.WholeExome.RP-1303.bam 23336023161 BAM NA 71f44c7a-8e13-4b2f-9a09-fba9d94785d6 e156c1ae08116edd2c757010186145bd hg19 Blood Derived Normal C3L-00418.WXS.N.hg38 C3L-00418 CCRCC WXS blood_normal CPT0002730002 a0658f29-2a4f-43c0-8d17-e351ea2f073f_gdc_realn.bam 31921602535 BAM NA f04b336a-904d-4844-8737-4d84c04119c9 9936d92f0adc6c956b91d67027d537eb hg38 Blood Derived Normal C3L-00418.WXS.T C3L-00418 CCRCC WXS tumor CPT0006630009 CPT0006630009.WholeExome.RP-1303.bam 23093054793 BAM NA 15bb9d8b-89c1-419f-b615-426795582dfe b718df15f46c6995cc6789c0bb7bb274 hg19 Primary Tumor +C3L-00418.WXS.T C3L-00418 CCRCC WXS tumor CPT0006640009 CPT0006640009.WholeExome.RP-1303.bam 22814762937 BAM NA 49efab1d-05c1-4860-8a71-1fc788f788af f92ec829b18ec0f790f72c5652fa2f4f hg19 Primary Tumor C3L-00418.WXS.T C3L-00418 CCRCC WXS tumor CPT0006670009 CPT0006670009.WholeExome.RP-1303.bam 20956379244 BAM NA b1332c8f-0f93-4455-aeea-16129fdbb736 b6fe196def5015ab94284e5561e57bb6 hg19 Primary Tumor C3L-00418.WXS.T.hg38 C3L-00418 CCRCC WXS tumor CPT0006630009 1b9f819b-a488-4f4d-8b10-cd30e4ada90c_gdc_realn.bam 31097433856 BAM NA 4a9f8a4a-599a-4584-8a3f-172e1e4f4f4d 16dc7885f18a7f8be77af21316a3582d hg38 Primary Tumor C3L-00422.MethArray.Green.A C3L-00422 LUAD Methylation Array tissue_normal CPT0082890009 203028200034_R04C01_Grn.idat 13676226 IDAT Green 8a1461f0-4350-4d39-a000-3a009059dbc6 538b5c0f202b233681a0528d6aaa44c4 NA Solid Tissue Normal @@ -1876,7 +1879,9 @@ C3L-00447.WXS.A C3L-00447 CCRCC WXS tissue_normal CPT0006950009 CPT0006950009.Wh C3L-00447.WXS.A.hg38 C3L-00447 CCRCC WXS tissue_normal CPT0006950009 675b1ebb-93a6-4a42-ba1f-aae866df5e02_wxs_gdc_realn.bam 44243834783 BAM NA a303ecdb-a13a-4903-a1de-929f509971bc 913bd1675792b2047bacb194c7e6ad5c hg38 Solid Tissue Normal C3L-00447.WXS.N C3L-00447 CCRCC WXS blood_normal CPT0002760002 CPT0002760002.WholeExome.RP-1303.bam 22369156445 BAM NA e13596df-ab0a-4528-9479-d471822c71ec 4713f5a633d12899666994c31fcffcb6 hg19 Blood Derived Normal C3L-00447.WXS.N.hg38 C3L-00447 CCRCC WXS blood_normal CPT0002760002 2acf7759-a2bf-47a0-b5e9-f32f6d1dd576_gdc_realn.bam 30882813614 BAM NA 5fcfa123-8827-4519-aefb-b0189ae82dc8 cf9ad0b46f5678903e0c5c56eb827368 hg38 Blood Derived Normal +C3L-00447.WXS.T C3L-00447 CCRCC WXS tumor CPT0006860009 CPT0006860009.WholeExome.RP-1303.bam 20997947433 BAM NA 83b7c6d0-5703-4399-adc1-75ccebd187df cc1517746f4be8c7a772721c37296d09 hg19 Primary Tumor C3L-00447.WXS.T C3L-00447 CCRCC WXS tumor CPT0006900009 CPT0006900009.WholeExome.RP-1303.bam 22912254096 BAM NA c564ce17-728a-45f0-afde-06061e1aff45 921b4613f831cbe80ee7b6e422571107 hg19 Primary Tumor +C3L-00447.WXS.T C3L-00447 CCRCC WXS tumor CPT0006910009 CPT0006910009.WholeExome.RP-1303.bam 49548117424 BAM NA edad4172-5c85-4a93-aaff-46201aa1735e c2aaa9d00c14fe64c932937e04b8dde4 hg19 Primary Tumor C3L-00447.WXS.T.hg38 C3L-00447 CCRCC WXS tumor CPT0006900009 51b9c76b-1f15-4493-9047-0d661fe133b6_gdc_realn.bam 31067852101 BAM NA 532f1bc2-2f90-4838-a000-aa75969e323c 099a35bda961bcd2947e0c8ebbe02e26 hg38 Primary Tumor C3L-00448.MethArray.Green.T C3L-00448 CCRCC Methylation Array tumor CPT0010160006 202163550115_R02C01_Grn.idat 13676230 IDAT Green aa70c016-7c19-43bf-a766-58db0fe32bd8 b3ce3c97e2dab9315ebc99dae1c76400 NA Primary Tumor C3L-00448.MethArray.Red.T C3L-00448 CCRCC Methylation Array tumor CPT0010160006 202163550115_R02C01_Red.idat 13676230 IDAT Red d08e3acc-3ecf-479b-88a9-46b778805e24 583e07433f11ef7df28c9d102e451d44 NA Primary Tumor @@ -2332,6 +2337,8 @@ C3L-00581.WXS.A.hg38 C3L-00581 CCRCC WXS tissue_normal CPT0007470009 4f72a152-44 C3L-00581.WXS.N C3L-00581 CCRCC WXS blood_normal CPT0002780002 CPT0002780002.WholeExome.RP-1303.bam 23676576506 BAM NA c6278968-ad2c-4f0d-baab-ccd25027a487 a73a85989072b413bf9c7f1ffa308f7a hg19 Blood Derived Normal C3L-00581.WXS.N.hg38 C3L-00581 CCRCC WXS blood_normal CPT0002780002 e9638496-3274-4e1b-b294-c8780236f749_gdc_realn.bam 32109620470 BAM NA 4d6619b0-b9a1-409b-ada3-8331aa643148 454b01a056dbaed814a55dea3bb30a41 hg38 Blood Derived Normal C3L-00581.WXS.T C3L-00581 CCRCC WXS tumor CPT0007320009 CPT0007320009.WholeExome.RP-1303.bam 26336411594 BAM NA 68cf7a29-11e8-4715-bf81-d0f74367a928 2264b202957ed716f5b5cb18404b48e2 hg19 Primary Tumor +C3L-00581.WXS.T C3L-00581 CCRCC WXS tumor CPT0007330009 CPT0007330009.WholeExome.RP-1303.bam 19300326576 BAM NA 6c49e2ec-c5ba-4d1e-b70e-49f7c5faa76f e327afa954140a8fba7bbe6dc189c4f8 hg19 Primary Tumor +C3L-00581.WXS.T C3L-00581 CCRCC WXS tumor CPT0007410009 CPT0007410009.WholeExome.RP-1303.bam 47988304333 BAM NA 3ac6322d-2f80-4bb5-a400-6015566d0b72 cbccbb61a8fd46e5ce23da18b2b7a399 hg19 Primary Tumor C3L-00581.WXS.T.hg38 C3L-00581 CCRCC WXS tumor CPT0007320009 98006060-84ac-4906-b27b-6f95c0806ab4_gdc_realn.bam 35804199649 BAM NA 4575fae3-b4ec-48c7-bfa4-db21f199403d 2a4dfc0dff76cb0776f412b67110b2d3 hg38 Primary Tumor C3L-00583.MethArray.Green.T C3L-00583 CCRCC Methylation Array tumor CPT0019130006 202178770109_R01C01_Grn.idat 13676233 IDAT Green aa57cb7a-fd7f-48cf-bed7-97aa62cd11a5 ee9a74dd1f66a6d50e00f045b0bc2f0b NA Primary Tumor C3L-00583.MethArray.Green.T C3L-00583 CCRCC Methylation Array tumor CPT0019140009 204372030070_R03C01_Grn.idat 13677900 IDAT Green d3d08696-407a-4430-9590-b59f0121027e 056699239512341c040d39d0737b4e87 NA Primary Tumor @@ -2373,6 +2380,7 @@ C3L-00583.WXS.N C3L-00583 CCRCC WXS blood_normal CPT0019900002 CPT0019900002.Who C3L-00583.WXS.N.hg38 C3L-00583 CCRCC WXS blood_normal CPT0019900002 4f7cf63d-7f7d-4b92-9616-d101839c5d0f_gdc_realn.bam 38153859823 BAM NA 45d0d4d7-49d7-4693-b792-03bd82f50105 d62722e2c44d984858e1033c8fb761f1 hg38 Blood Derived Normal C3L-00583.WXS.T C3L-00583 CCRCC WXS tumor CPT0019130006 CPT0019130006.WholeExome.RP-1303.bam 36543232034 BAM NA 7a0d6fcc-f152-4926-b209-8c18dc2fc2fb 35e5096485dec8031968a67d82e07bb1 hg19 Primary Tumor C3L-00583.WXS.T C3L-00583 CCRCC WXS tumor CPT0019140009 CPT0019140009.WholeExome.RP-1303.bam 22034496721 BAM NA ccf7a2b6-6ce6-4653-bd20-d18384a04550 90ef3b720efce1f1219e448cf8c133c5 hg19 Primary Tumor +C3L-00583.WXS.T C3L-00583 CCRCC WXS tumor CPT0019150009 CPT0019150009.WholeExome.RP-1303.bam 21372716267 BAM NA cdafe1e5-1437-4924-9e93-0faf02b273fc 393e8d2decdfe4e3a62f79aeb227de7c hg19 Primary Tumor C3L-00583.WXS.T.hg38 C3L-00583 CCRCC WXS tumor CPT0019130006 b95aa1d8-289e-4fb5-8a7c-362ab610d931_gdc_realn.bam 49483675931 BAM NA 2d63999a-b9eb-4a93-8f09-bb3df487f938 31cff4b066215643b9fe55e7dee28b39 hg38 Primary Tumor C3L-00586.MethArray.Green.T C3L-00586 UCEC Methylation Array tumor CPT0023630006 202163550076_R02C01_Grn.idat 13676226 IDAT Green 16464daf-4e9f-452a-bd44-708658e30f26 bf8cae4e6e35e2598122bd9ecf73ad33 NA Primary Tumor C3L-00586.MethArray.Red.T C3L-00586 UCEC Methylation Array tumor CPT0023630006 202163550076_R02C01_Red.idat 13676226 IDAT Red 476434a3-bffb-43a0-ae51-1b2c73068b84 bbc8ae42753ba8cf62dcda200b236c00 NA Primary Tumor @@ -2636,6 +2644,8 @@ C3L-00606.WXS.A.hg38 C3L-00606 CCRCC WXS tissue_normal CPT0079300009 e037f72e-e7 C3L-00606.WXS.N C3L-00606 CCRCC WXS blood_normal CPT0080110002 CPT0080110002.WholeExome.RP-1303.bam 22403374998 BAM NA f55b6f7a-e090-4784-a875-8f07dc6877ed db29df9155eb841ceb46d4f8278709ca hg19 Blood Derived Normal C3L-00606.WXS.N.hg38 C3L-00606 CCRCC WXS blood_normal CPT0080110002 b8fe112b-ae62-4c1f-8856-7599e851035c_gdc_realn.bam 30061559684 BAM NA e6c6780a-4cc7-432e-8431-5b59a15d11c6 d31757394104b36d985330030dffe089 hg38 Blood Derived Normal C3L-00606.WXS.T C3L-00606 CCRCC WXS tumor CPT0079270009 CPT0079270009.WholeExome.RP-1303.bam 31587024929 BAM NA 96a41058-8e54-4314-b1d1-72f3345bbf85 66a8167c24b878cb650309f4075445ab hg19 Primary Tumor +C3L-00606.WXS.T C3L-00606 CCRCC WXS tumor CPT0079280009 CPT0079280009.WholeExome.RP-1303.bam 18200718527 BAM NA 013942d6-758d-4b72-be74-b75db3e0078d 72f0169faf53b38616dc012529b2809d hg19 Primary Tumor +C3L-00606.WXS.T C3L-00606 CCRCC WXS tumor CPT0079290009 CPT0079290009.WholeExome.RP-1303.bam 17343605850 BAM NA cf6ce7ca-45ef-41f2-aec1-d67c9ca16460 70798709fb700dbc1eccc14a2df3bea2 hg19 Primary Tumor C3L-00606.WXS.T.hg38 C3L-00606 CCRCC WXS tumor CPT0079270009 c873d23c-79cd-44f8-bfe1-1991e24a6f7d_gdc_realn.bam 43524921618 BAM NA 08e74cee-0100-4130-8225-fd2b77b0e592 7f66a1f37f818061e7ebe553c6051e79 hg38 Primary Tumor C3L-00607.MethArray.Green.T C3L-00607 CCRCC Methylation Array tumor CPT0025050009 202184990066_R03C01_Grn.idat 13676216 IDAT Green cd8d2e9c-72fe-4001-99cb-1a1fdc57be21 f0143197839bdb1f161b47b67c93afc2 NA Primary Tumor C3L-00607.MethArray.Red.T C3L-00607 CCRCC Methylation Array tumor CPT0025050009 202184990066_R03C01_Red.idat 13676216 IDAT Red aa4503cd-1152-4820-b650-ab6191a56189 6d03c191db5ac79ff340dc5c754ccaa8 NA Primary Tumor @@ -3495,6 +3505,8 @@ C3L-00907.WXS.A.hg38 C3L-00907 CCRCC WXS tissue_normal CPT0064400009 bba5ddc0-4f C3L-00907.WXS.N C3L-00907 CCRCC WXS blood_normal CPT0065420002 CPT0065420002.WholeExome.RP-1303.bam 31957245596 BAM NA 98078c72-93d6-49b1-9d19-93ed16ee1393 166f4b6cc556066519811d7190094c61 hg19 Blood Derived Normal C3L-00907.WXS.N.hg38 C3L-00907 CCRCC WXS blood_normal CPT0065420002 9e37fe3b-588b-4e4b-87fb-8e427490226e_gdc_realn.bam 43540660835 BAM NA fd93766a-9f13-4593-8ef2-48d84271719c 6f55b9a84c93e42b9aca3f16f324fefe hg38 Blood Derived Normal C3L-00907.WXS.T C3L-00907 CCRCC WXS tumor CPT0064370006 CPT0064370006.WholeExome.RP-1303.bam 30791920405 BAM NA 3c893cd0-8fcc-4193-8720-c43a53a4ac19 ea9ef374baf0ae54946dfe1b93719dc5 hg19 Primary Tumor +C3L-00907.WXS.T C3L-00907 CCRCC WXS tumor CPT0064380009 CPT0064380009.WholeExome.RP-1303.bam 22329579570 BAM NA 5e991954-3604-478b-aa3a-da2587b3a2e4 1d3b8b409fb421f1cd5bac210dc1d857 hg19 Primary Tumor +C3L-00907.WXS.T C3L-00907 CCRCC WXS tumor CPT0064390009 CPT0064390009.WholeExome.RP-1303.bam 22086387660 BAM NA 91890fd2-a52c-4107-a505-28abfc524cf7 33af2da0ae0511fc3afc67c438a2a9ad hg19 Primary Tumor C3L-00907.WXS.T.hg38 C3L-00907 CCRCC WXS tumor CPT0064370006 f746e289-2012-475a-840c-dc31a8909963_gdc_realn.bam 42988709588 BAM NA 5b8f478a-209f-47bc-893b-5d7302cd4f79 73e343702883bd9a89a67d572341d3a7 hg38 Primary Tumor C3L-00908.MethArray.Green.T C3L-00908 CCRCC Methylation Array tumor CPT0086350006 203027390040_R02C01_Grn.idat 13676241 IDAT Green 3013b22a-439d-4497-ac9f-bf75810cd989 af7026f23787ddba6aa7f2ed6f5405aa NA Primary Tumor C3L-00908.MethArray.Green.T.deprecated C3L-00908 CCRCC Methylation Array tumor CPT0086360009 202184900140_R04C01_Grn.idat 13676261 IDAT Green 098f45d0-13aa-4ca2-bffb-34c3a6cf0d5c 422f67f93dce0336fc874f8268f16de0 NA Primary Tumor @@ -5208,7 +5220,9 @@ C3L-01232.miRNA-Seq.T C3L-01232 GBM miRNA-Seq tumor CPT0239440013 200526_UNC32-K C3L-01232.RNA-Seq.R1.T C3L-01232 GBM RNA-Seq tumor CPT0239440013 200212_UNC31-K00269_0265_BHGCWGBBXY_ATGGCATG-AAGGTACC_S16_L005_R1_001.fastq.gz 3741665722 FASTQ NA 1b412bf7-dfe6-46ce-8351-540dfc2698d5 ca430e7624c7f4e9558a2dfedf55dc57 NA Primary Tumor C3L-01232.RNA-Seq.R2.T C3L-01232 GBM RNA-Seq tumor CPT0239440013 200212_UNC31-K00269_0265_BHGCWGBBXY_ATGGCATG-AAGGTACC_S16_L005_R2_001.fastq.gz 4101913109 FASTQ NA 64276f84-695c-4a6a-bde8-0b0378f17656 1d8674b8ac8a9674ea77abd5d143bf6a NA Primary Tumor C3L-01232.WGS.N C3L-01232 GBM WGS blood_normal CPT0240430002 CPT0240430002.WholeGenome.RP-2158.bam 23484726875 BAM NA c3630728-631d-4c32-b3b8-4d764a9edc96 0501a0a077c2879fc992c60b8710eed5 hg19 Blood Derived Normal +C3L-01232.WGS.N.hg38 C3L-01232 GBM WGS blood_normal CPT0240430002 54352f31-de32-4a52-b0c0-1ab882496fc3_wgs_gdc_realn.bam 67565943172 BAM NA c7777e0c-2447-4d47-aa47-e65bed9a8e47 9d4d7f696d14065132ceb994591df7fd hg38 Blood Derived Normal C3L-01232.WGS.T C3L-01232 GBM WGS tumor CPT0239440006 CPT0239440006.WholeGenome.RP-2158.bam 25689260792 BAM NA 62c0cb54-b429-4b6d-b1ef-4f0217a50eb0 6a8016adbd37a06820918b2e009b4f90 hg19 Primary Tumor +C3L-01232.WGS.T.hg38 C3L-01232 GBM WGS tumor CPT0239440006 218349a8-16e2-4bcd-9c9a-690bc5152441_wgs_gdc_realn.bam 74541963072 BAM NA 7794e4ec-ebc2-40ca-9e51-a0a869ecc2be b6472a153f6389f17d1ac7d25bccdc55 hg38 Primary Tumor C3L-01232.WXS.N C3L-01232 GBM WXS blood_normal CPT0240430002 CPT0240430002.WholeExome.RP-1303.bam 32725473162 BAM NA 543de157-2e71-4709-9fec-91f43bd4cc9e 71a55f8a3369b9970eb081f7274bb241 hg19 Blood Derived Normal C3L-01232.WXS.T C3L-01232 GBM WXS tumor CPT0239440006 CPT0239440006.WholeExome.RP-1303.bam 22882723649 BAM NA 9983b071-cda4-4712-8dea-9f1a086c30a4 0f1f807ba4ae153aa8cd98468094ccbe hg19 Primary Tumor C3L-01237.MethArray.Green.A C3L-01237 HNSCC Methylation Array tissue_normal CPT0199830006 203273200155_R03C01_Grn.idat 13676206 IDAT Green 7d9b376f-b14f-44de-8271-d469b55c8890 2590cafad4b7bcd5bb276191be239ec0 NA Solid Tissue Normal @@ -5621,7 +5635,9 @@ C3L-01286.WXS.A C3L-01286 CCRCC WXS tissue_normal CPT0086970009 CPT0086970009.Wh C3L-01286.WXS.A.hg38 C3L-01286 CCRCC WXS tissue_normal CPT0086970009 76a1e6c8-1257-40b0-b2e0-941a1a66b0da_wxs_gdc_realn.bam 55832622700 BAM NA 738ac470-1442-499d-949e-ec07e8738a1c 39d11fb345933402dff46953c090cd2f hg38 Solid Tissue Normal C3L-01286.WXS.N C3L-01286 CCRCC WXS blood_normal CPT0087450002 CPT0087450002.WholeExome.RP-1303.bam 30524990035 BAM NA 0320078f-441a-4022-8054-801fb802626c d7434b87d2f8b158e9587fbd2551fab8 hg19 Blood Derived Normal C3L-01286.WXS.N.hg38 C3L-01286 CCRCC WXS blood_normal CPT0087450002 d82565ca-eaa7-41fe-8a36-6cd4ec201b64_gdc_realn.bam 41430327836 BAM NA c44e27d0-9c27-42c1-8a29-760ae836bab5 ca8c38e7d8e4fa0609b9f54cae8f3c33 hg38 Blood Derived Normal +C3L-01286.WXS.T C3L-01286 CCRCC WXS tumor CPT0086940009 CPT0086940009.WholeExome.RP-1303.bam 20984438578 BAM NA 87f6237d-f3fa-4114-a385-7c234844f66d 1db24985f0f3468195c2d1c14f0c87f3 hg19 Primary Tumor C3L-01286.WXS.T C3L-01286 CCRCC WXS tumor CPT0086950009 CPT0086950009.WholeExome.RP-1303.bam 31052727047 BAM NA 815a8e47-a93e-441f-abde-23b93423d09d 626ce0f0cb5d435326ea8df6123674de hg19 Primary Tumor +C3L-01286.WXS.T C3L-01286 CCRCC WXS tumor CPT0086960009 CPT0086960009.WholeExome.RP-1303.bam 48709874164 BAM NA d4c353ab-065e-4b2e-a4d5-f245b69b437c 039df81f98053427f6d11b5c1a372cce hg19 Primary Tumor C3L-01286.WXS.T.hg38 C3L-01286 CCRCC WXS tumor CPT0086950009 055ee558-21d4-4aff-8edd-54f646918acc_gdc_realn.bam 43614684455 BAM NA b7647bbe-e07f-45e9-84e3-1d0073c81f28 2c5cf62ff951ac58c9baabd5ee157953 hg38 Primary Tumor C3L-01287.MethArray.Green.T C3L-01287 CCRCC Methylation Array tumor CPT0079400012 204372030011_R03C01_Grn.idat 13677890 IDAT Green f3a8e55b-36f0-4dc8-90b0-97e107689fd8 82583ad704445cdbdbb64236676b98b4 NA Primary Tumor C3L-01287.MethArray.Green.T C3L-01287 CCRCC Methylation Array tumor CPT0079410009 202178770045_R05C01_Grn.idat 13676241 IDAT Green 3accc92b-f813-4e0b-ad5e-fb260d344300 1c7c8f8695257d4b72f9f1b06df9b9bc NA Primary Tumor @@ -5661,6 +5677,7 @@ C3L-01287.WXS.A C3L-01287 CCRCC WXS tissue_normal CPT0079430009 CPT0079430009.Wh C3L-01287.WXS.A.hg38 C3L-01287 CCRCC WXS tissue_normal CPT0079430009 3d55cf96-5355-4926-a2ad-a0d585794c90_wxs_gdc_realn.bam 51929128191 BAM NA 97295447-04b9-40eb-a949-97523ed5a81d 9d32a85447151f5a2ea3d9241f605d0b hg38 Solid Tissue Normal C3L-01287.WXS.N C3L-01287 CCRCC WXS blood_normal CPT0080130002 CPT0080130002.WholeExome.RP-1303.bam 25563735605 BAM NA 3dca7d9d-4a61-4f5e-b755-95f91bbd6ca3 2d30c42c54aa54380f5ec724dc49a020 hg19 Blood Derived Normal C3L-01287.WXS.N.hg38 C3L-01287 CCRCC WXS blood_normal CPT0080130002 5ed32977-dc68-4499-91a2-14b00a4c0c9e_gdc_realn.bam 34480365456 BAM NA 8f61ee95-ee30-47d2-b678-3b345ff918f8 2454f7475519c8e355157183ecc72b8b hg38 Blood Derived Normal +C3L-01287.WXS.T C3L-01287 CCRCC WXS tumor CPT0079400012 CPT0079400012.WholeExome.RP-1303.bam 19704483775 BAM NA b607e677-46be-4a1a-9dc6-953e88ea1638 2c3baa5f7ace8181b827f9d7056c6348 hg19 Primary Tumor C3L-01287.WXS.T C3L-01287 CCRCC WXS tumor CPT0079410009 CPT0079410009.WholeExome.RP-1303.bam 35485000060 BAM NA 4e7b65e8-2d77-41a3-9e4a-0e3c0af81d85 94b61a270fa8bc8371820f3a6238aeeb hg19 Primary Tumor C3L-01287.WXS.T C3L-01287 CCRCC WXS tumor CPT0079420012 CPT0079420012.WholeExome.RP-1303.bam 18616711740 BAM NA 2112b0a9-7037-4c84-be14-36d997228bf4 39f4aa62d9ff197749151b9b94eb22ba hg19 Primary Tumor C3L-01287.WXS.T.hg38 C3L-01287 CCRCC WXS tumor CPT0079410009 07514a87-8290-46cf-9276-ed86d25cafcb_gdc_realn.bam 48626755556 BAM NA e58d856a-e047-41f2-8700-4a7f61158cd4 f4329505e84451bfd3d0a0d67ecaf261 hg38 Primary Tumor @@ -6344,6 +6361,8 @@ C3L-01603.WXS.A C3L-01603 CCRCC WXS tissue_normal CPT0087050009 CPT0087050009.Wh C3L-01603.WXS.A.hg38 C3L-01603 CCRCC WXS tissue_normal CPT0087050009 92c6bca3-e903-4b6a-b994-b4711ebbf5ba_wxs_gdc_realn.bam 36443694772 BAM NA 78d90952-0702-4498-babd-304a8883bc65 9f6a2d5431c541b6f661ed6527490c89 hg38 Solid Tissue Normal C3L-01603.WXS.N C3L-01603 CCRCC WXS blood_normal CPT0087460001 CPT0087460001.WholeExome.RP-1303.bam 33839393409 BAM NA 7aba65f0-d3c6-4f7b-8a1f-74aa7c88a6ea 89fec373e24c2670fe747f6c743a0353 hg19 Blood Derived Normal C3L-01603.WXS.N.hg38 C3L-01603 CCRCC WXS blood_normal CPT0087460001 0bf76841-56c0-4d7b-9ac8-404463eebb19_gdc_realn.bam 47249064201 BAM NA dc692a2f-c698-4e56-a99c-4de2ab303ec1 21934223cbd08bf8d042803c2db8e7ab hg38 Blood Derived Normal +C3L-01603.WXS.T C3L-01603 CCRCC WXS tumor CPT0087020009 CPT0087020009.WholeExome.RP-1303.bam 21348531179 BAM NA e5e31d36-6c04-4fbf-b38c-f1faaa13f39b 3ec8036a10927808f381667f65055bae hg19 Primary Tumor +C3L-01603.WXS.T C3L-01603 CCRCC WXS tumor CPT0087030009 CPT0087030009.WholeExome.RP-1303.bam 25134536872 BAM NA 06a293d4-4b40-43c7-8c8a-e1a7e8b4cb21 54c85c7b3bd9d49169145cee8e33e38b hg19 Primary Tumor C3L-01603.WXS.T C3L-01603 CCRCC WXS tumor CPT0087040009 CPT0087040009.WholeExome.RP-1303.bam 47255286396 BAM NA 4d240691-aab4-46d5-bb2f-77628dea885b 5db289b37fdcb98517e8e6c6fc688a59 hg19 Primary Tumor C3L-01603.WXS.T.hg38 C3L-01603 CCRCC WXS tumor CPT0087040009 68b4ea45-a8af-4d72-b8b0-35a102d2f517_gdc_realn.bam 65921297500 BAM NA 9cf6e0c1-e777-4ca3-b956-07947dce8216 1e88d381a9c082b9cab126fd0f16f276 hg38 Primary Tumor C3L-01604.MethArray.Green.T C3L-01604 UCEC Methylation Array tumor CPT0086410009 202176290105_R07C01_Grn.idat 13676216 IDAT Green 5b0d4980-f174-4309-81c7-b752ef145e53 7c1ab4eb66602fdda80241f3fd558312 NA Primary Tumor @@ -6432,6 +6451,8 @@ C3L-01607.WXS.A.hg38 C3L-01607 CCRCC WXS tissue_normal CPT0092190009 db922bd9-8b C3L-01607.WXS.N C3L-01607 CCRCC WXS blood_normal CPT0093750002 CPT0093750002.WholeExome.RP-1303.bam 33070394038 BAM NA ef20087f-66d0-4768-9c24-e6e6f40f8002 8073031393d1bcc08341053a81c82421 hg19 Blood Derived Normal C3L-01607.WXS.N.hg38 C3L-01607 CCRCC WXS blood_normal CPT0093750002 2986b7c9-3b40-46f8-a85a-4160c153fb79_wxs_gdc_realn.bam 45394535909 BAM NA e3ad46da-7db1-40bd-b135-ceeeb270d8e5 b9e879d99cbedcefaf44f4e427113364 hg38 Blood Derived Normal C3L-01607.WXS.T C3L-01607 CCRCC WXS tumor CPT0092160009 CPT0092160009.WholeExome.RP-1303.bam 33833188091 BAM NA 16b4ad52-019f-45b8-af82-cf884e1421dd 7e3d9e7d1f5f981f227baecbfe7325a9 hg19 Primary Tumor +C3L-01607.WXS.T C3L-01607 CCRCC WXS tumor CPT0092170009 CPT0092170009.WholeExome.RP-1303.bam 24010665875 BAM NA 63adb4cd-ded6-405b-8aea-373f6f498595 3aae08ea7d8922f6782dc6dca5402118 hg19 Primary Tumor +C3L-01607.WXS.T C3L-01607 CCRCC WXS tumor CPT0092180009 CPT0092180009.WholeExome.RP-1303.bam 24306445394 BAM NA 830cee91-b9a4-4798-ab66-9997ea42afaa e87f0cee5c45640d2430c575a2084019 hg19 Primary Tumor C3L-01607.WXS.T.hg38 C3L-01607 CCRCC WXS tumor CPT0092160009 0787b6cc-fab1-4c71-8db6-10d6093ce29d_wxs_gdc_realn.bam 46732242259 BAM NA 78055e79-e0e9-4a8d-989f-1c30f31745cd dc9b4d279ba71377e1bbd9d4812b6ead hg38 Primary Tumor C3L-01631.MethArray.Green.T C3L-01631 UCEC Methylation Array tumor CPT0091720009 202234380051_R04C01_Grn.idat 13676231 IDAT Green 810c3000-3a91-4e59-ab17-2a5b3abedc4a 8a5111726a8af5afadf751e3832d9f73 NA Primary Tumor C3L-01631.MethArray.Red.T C3L-01631 UCEC Methylation Array tumor CPT0091720009 202234380051_R04C01_Red.idat 13676231 IDAT Red 6c51a1b7-3ff1-4fcd-8d34-91bf052be2db 705481c9b73bfa4b1059ec4ab294b9bb NA Primary Tumor @@ -7100,7 +7121,9 @@ C3L-01836.WXS.A C3L-01836 CCRCC WXS tissue_normal CPT0086890009 CPT0086890009.Wh C3L-01836.WXS.A.hg38 C3L-01836 CCRCC WXS tissue_normal CPT0086890009 79324909-5b7b-47bf-a656-6578f9b68759_wxs_gdc_realn.bam 50383903841 BAM NA 0393e507-06cc-4442-ae26-31291ad8bdee 22ac4d951c3fedadc179347039f7fc25 hg38 Solid Tissue Normal C3L-01836.WXS.N C3L-01836 CCRCC WXS blood_normal CPT0087440002 CPT0087440002.WholeExome.RP-1303.bam 39690857130 BAM NA a3fbead7-ec05-4d25-9845-69f6c96d3597 d1cfd6e84762f8d139c17d4a5ea68869 hg19 Blood Derived Normal C3L-01836.WXS.N.hg38 C3L-01836 CCRCC WXS blood_normal CPT0087440002 d8619652-f544-49a1-83ca-bf3bdaaea21c_gdc_realn.bam 54929211870 BAM NA 247f32de-8c96-4795-9a98-7a342e6570ec 64de381b67e8460d6952fa565c726eea hg38 Blood Derived Normal +C3L-01836.WXS.T C3L-01836 CCRCC WXS tumor CPT0086860009 CPT0086860009.WholeExome.RP-1303.bam 19200935637 BAM NA 0ed67501-c064-48ef-a2db-ce415df7eaed 49f0f07ef90fad39182f9d7ac41e1b5f hg19 Primary Tumor C3L-01836.WXS.T C3L-01836 CCRCC WXS tumor CPT0086870009 CPT0086870009.WholeExome.RP-1303.bam 36090835109 BAM NA 75996363-a0cf-4d94-87c0-ffa5c2005fbf fdfff1915210bf8cd0c4ba0f4ba1ea53 hg19 Primary Tumor +C3L-01836.WXS.T C3L-01836 CCRCC WXS tumor CPT0086880009 CPT0086880009.WholeExome.RP-1303.bam 23858097221 BAM NA 841b31a6-3923-4a45-a5e2-a6d91ba61821 4422b4d78b97e88ca80a14d00fb1e247 hg19 Primary Tumor C3L-01836.WXS.T.hg38 C3L-01836 CCRCC WXS tumor CPT0086870009 8ec46333-92ee-4b6a-9b5f-3cd668959bcb_gdc_realn.bam 49992051960 BAM NA c889a7bb-fcd6-4246-94a8-324b1d86ef07 9b758db4fdbd1f793dd570dba1b22083 hg38 Primary Tumor C3L-01838.MethArray.Green.T C3L-01838 LSCC Methylation Array tumor CPT0091820009 202234380058_R06C01_Grn.idat 13676231 IDAT Green 1c79268e-2033-4b85-9641-002a3087b56f 9cd2bd200b0e85b7b327e243708ce66e NA Primary Tumor C3L-01838.MethArray.Red.T C3L-01838 LSCC Methylation Array tumor CPT0091820009 202234380058_R06C01_Red.idat 13676231 IDAT Red 2af5d015-67e8-4ae1-821a-0a42e719e528 d8c64a670bf005e60bbaf89394fcd951 NA Primary Tumor @@ -7176,7 +7199,9 @@ C3L-01861.WXS.A C3L-01861 CCRCC WXS tissue_normal CPT0092310009 CPT0092310009.Wh C3L-01861.WXS.A.hg38 C3L-01861 CCRCC WXS tissue_normal CPT0092310009 12053926-97e3-4dab-ba27-56a85edfa7ff_wxs_gdc_realn.bam 74920230427 BAM NA 8cfd084b-29ed-4b39-bbf9-721ee40a728b d9528608c87c84c754bf0ff648b9339e hg38 Solid Tissue Normal C3L-01861.WXS.N C3L-01861 CCRCC WXS blood_normal CPT0093770002 CPT0093770002.WholeExome.RP-1303.bam 37631380019 BAM NA 80f3070d-1937-4b77-b4c0-7ba621b18f1e 28bd80f0d20f065087005d4598c3815c hg19 Blood Derived Normal C3L-01861.WXS.N.hg38 C3L-01861 CCRCC WXS blood_normal CPT0093770002 f912ddc2-0ba2-4be5-aad6-aa64ad5fa1b4_wxs_gdc_realn.bam 51585129445 BAM NA 3cc6f8b6-730c-4a45-8475-4f6818ee920b 02f29ea6f8f5d613ae09a44f2570b3c3 hg38 Blood Derived Normal +C3L-01861.WXS.T C3L-01861 CCRCC WXS tumor CPT0092280009 CPT0092280009.WholeExome.RP-1303.bam 17401476180 BAM NA 23775c6b-7f49-4893-9920-202bce04f5ca 5ea43ea4fe23e6fe069ef89f906997bf hg19 Primary Tumor C3L-01861.WXS.T C3L-01861 CCRCC WXS tumor CPT0092290008 CPT0092290008.WholeExome.RP-1303.bam 37674706888 BAM NA 0c01bc5e-6fa1-4692-ae47-2f027a0cafa2 4907d449efa78445c462ace2df16638b hg19 Primary Tumor +C3L-01861.WXS.T C3L-01861 CCRCC WXS tumor CPT0092300009 CPT0092300009.WholeExome.RP-1303.bam 22750019576 BAM NA fcf5c23e-6d46-4394-9762-2987efcd5b53 5e58ad39b8a0d214d840febdd6e1e729 hg19 Primary Tumor C3L-01861.WXS.T.hg38 C3L-01861 CCRCC WXS tumor CPT0092290008 b35c7cca-5e9e-4445-8b60-2427084ce2b7_wxs_gdc_realn.bam 52960795936 BAM NA eca71105-fdc4-4bd6-957e-ab0bd45d633a ba01eb183415e6d5c377a65d0050078e hg38 Primary Tumor C3L-01862.MethArray.Green.T C3L-01862 LUAD Methylation Array tumor CPT0092530009 202234370079_R02C01_Grn.idat 13676231 IDAT Green e848e74e-5a73-4f4a-a916-b33930a82636 9592ec24abeeb545c4f7c364bb3f6d45 NA Primary Tumor C3L-01862.MethArray.Red.T C3L-01862 LUAD Methylation Array tumor CPT0092530009 202234370079_R02C01_Red.idat 13676231 IDAT Red d7de1cac-0c4f-4e22-8c58-872d137e44fd 63e1a73037da8bad1150b7669233cda8 NA Primary Tumor @@ -8857,6 +8882,7 @@ C3L-02392.RNA-Seq.transcriptome.T.hg38 C3L-02392 UCEC RNA-Seq tumor CPT020325001 C3L-02392.WGS.N C3L-02392 UCEC WGS blood_normal CPT0203310002 CPT0203310002.WholeGenome.RP-1303.bam 73986187364 BAM NA 0fec6ec2-a474-4088-a9c6-26f8d36fcdbd f343762118285683c7b2470ea51bd06b hg19 Blood Derived Normal C3L-02392.WGS.N.hg38 C3L-02392 UCEC WGS blood_normal CPT0203310002 ebccbb2e-028d-40f4-8880-6dd3967edde8_wgs_gdc_realn.bam 107766832826 BAM NA 82831af9-d6ec-4673-8440-5cf41005227a de7df6ccd37ea45f0ba58b725fed2770 hg38 Blood Derived Normal C3L-02392.WGS.T C3L-02392 UCEC WGS tumor CPT0203250011 CPT0203250011.WholeGenome.RP-1303.bam 80150789306 BAM NA 143f0cc4-2c83-4fc3-8de0-c263ad3228f4 61311157786296a7c87c4f1739960556 hg19 Primary Tumor +C3L-02392.WGS.T.hg38 C3L-02392 UCEC WGS tumor CPT0203250011 c964c60c-be35-45c6-b7a7-12b7fb3622f5_wgs_gdc_realn.bam 117962729732 BAM NA 6d07581d-a14e-44f3-98b7-af5d6eccd861 b187a01d2d09e8303d58c84ed76fbb51 hg38 Primary Tumor C3L-02392.WXS.N C3L-02392 UCEC WXS blood_normal CPT0203310002 CPT0203310002.WholeExome.RP-1303.bam 22866265523 BAM NA b2b349b6-2afe-4e1d-b868-86329323d8d5 07eb2fe64260a3df5317968084d18d02 hg19 Blood Derived Normal C3L-02392.WXS.N.hg38 C3L-02392 UCEC WXS blood_normal CPT0203310002 ebccbb2e-028d-40f4-8880-6dd3967edde8_wxs_gdc_realn.bam 31542407905 BAM NA 5688d8f9-1b32-4fc7-b6e8-585e30a9974a b6d37ca2804ff800b5ea449b8abc7b62 hg38 Blood Derived Normal C3L-02392.WXS.T C3L-02392 UCEC WXS tumor CPT0203250011 CPT0203250011.WholeExome.RP-1303.bam 26963643435 BAM NA 7676d548-26f5-45d8-b455-2e6842eda68d ccc04ceab181809b5704a1dfae2c493e hg19 Primary Tumor @@ -9773,6 +9799,7 @@ C3L-02617.RNA-Seq.transcriptome.A.hg38 C3L-02617 HNSCC RNA-Seq tissue_normal CPT C3L-02617.RNA-Seq.transcriptome.T.hg38 C3L-02617 HNSCC RNA-Seq tumor CPT0229190013 17194f4b-1bcc-4544-a8ae-6cc7b07cac28.rna_seq.transcriptome.gdc_realn.bam 7746842242 BAM transcriptome a60acf6e-7c8e-4907-bd23-a89be6a85c46 a58d56402de1250d5874b257b4bce694 hg38 Primary Tumor C3L-02617.RNA-Seq.transcriptome.T.hg38.deprecated C3L-02617 HNSCC RNA-Seq tumor CPT0229210013 66d7c72a-4c52-4c59-ab64-e942307ca90a.rna_seq.transcriptome.gdc_realn.bam 8766560815 BAM transcriptome aa0bd959-57b6-426b-ac06-67c089d53048 b11402f6b2d636ceeadb8c203c021de7 hg38 Primary Tumor C3L-02617.WGS.N C3L-02617 HNSCC WGS blood_normal CPT0229330002 CPT0229330002.WholeGenome.RP-1303.bam 50029662993 BAM NA fada43cc-f22c-4626-8c7b-6de4b436c304 45fb182cf05bcc89a7f71b1b08d01030 hg19 Blood Derived Normal +C3L-02617.WGS.N.hg38 C3L-02617 HNSCC WGS blood_normal CPT0229330002 f13bac4a-9644-49b5-b293-9a1c7bbc403f_wgs_gdc_realn.bam 75722880431 BAM NA 417dfe70-1bfe-4de0-930c-61ffe8b20253 e10be1a2c947ecb5083cd0df637b57c8 hg38 Blood Derived Normal C3L-02617.WGS.T C3L-02617 HNSCC WGS tumor CPT0229190006 CPT0229190006.WholeGenome.RP-1303.bam 76422429885 BAM NA f4a7039d-7d60-447e-817b-928d0c7056ea 3b00e13ceb72e7c2f7464c4af3c9bbe4 hg19 Primary Tumor C3L-02617.WGS.T.hg38 C3L-02617 HNSCC WGS tumor CPT0229190006 be017248-e1fd-45fd-b185-d0e102ada4e8_wgs_gdc_realn.bam 110729474179 BAM NA 90464380-6f65-439f-9566-28df2137ae7a 0fe1851bc21fd9847639252d5006e6a3 hg38 Primary Tumor C3L-02617.WXS.A C3L-02617 HNSCC WXS tissue_normal CPT0229230006 CPT0229230006.WholeExome.RP-1303.bam 46156720375 BAM NA b0093ea5-0716-4bcf-9758-d9851527e6f4 aa17079049b6249855452d69a28fa14c hg19 Solid Tissue Normal @@ -9788,13 +9815,17 @@ C3L-02618.MethArray.Green.T C3L-02618 LSCC Methylation Array tumor CPT0241660006 C3L-02618.MethArray.Red.A C3L-02618 LSCC Methylation Array tissue_normal CPT0241840006 204367490082_R07C01_Red.idat 13677900 IDAT Red 0e69ebb6-a9de-47d8-99bf-d76da96ae44d d013be9021b95722b18f08bfc386a95e NA Solid Tissue Normal C3L-02618.MethArray.Red.T C3L-02618 LSCC Methylation Array tumor CPT0241660006 204372030022_R05C01_Red.idat 13677905 IDAT Red f00089fa-0867-4399-9fe1-d41e7e2b60cc 438af9e864c143174754bc40891053a7 NA Primary Tumor C3L-02618.miRNA-Seq.A C3L-02618 LSCC miRNA-Seq tissue_normal CPT0241840009 200513_UNC31-K00269_0278_BHH7Y7BBXY_GATCAG_S13_L005_R1_001.unaln.bam 146722930 BAM NA cc34677b-355d-4b79-8862-6d0dff46e4fa ce8bbff6ae129331078f1c431e7b0d34 NA Solid Tissue Normal +C3L-02618.miRNA-Seq.A.hg38 C3L-02618 LSCC miRNA-Seq tissue_normal CPT0241840009 bea9f18f-eb91-41a1-87e6-fdc9cda99b8e_mirnaseq_gdc_realn.bam 168527219 BAM NA 3439362e-efa7-4105-85ab-0c2a782f7c66 f9cc392d5980a37ab7b65a8c6764cb76 hg38 Solid Tissue Normal C3L-02618.miRNA-Seq.T C3L-02618 LSCC miRNA-Seq tumor CPT0241660009 200224_UNC31-K00269_0267_AHC722BBXY_CTAGCT_S38_L007_R1_001.unaln.bam 267125377 BAM NA a45892c5-c497-4d0b-a9d3-80c8590b6e04 21677a60bd26136b0ada28ef5e066cb2 NA Primary Tumor +C3L-02618.miRNA-Seq.T.hg38 C3L-02618 LSCC miRNA-Seq tumor CPT0241660009 12b4c961-3ae9-43b7-a87e-b9b1bf9bb429_mirnaseq_gdc_realn.bam 296426816 BAM NA 509a6ab3-0368-4d6f-a458-2bdb6536603a b04fac954bbc54dfc19a0b08570c4c93 hg38 Primary Tumor C3L-02618.RNA-Seq.R1.A C3L-02618 LSCC RNA-Seq tissue_normal CPT0241840009 200505_UNC32-K00270_0245_AHH5FVBBXY_AGTTCAGG-CCAACAGA_S9_L007_R1_001.fastq.gz 3674769212 FASTQ NA 3167e6d4-db7d-44b7-9a34-1a6c8480ca9e 6bf7ce8238c679e856bd43995ab1b397 NA Solid Tissue Normal C3L-02618.RNA-Seq.R1.T C3L-02618 LSCC RNA-Seq tumor CPT0241660009 200428_UNC32-K00270_0243_AHG3Y3BBXY_CTACGACA-GAGTCCAA_S6_L002_R1_001.fastq.gz 4081820593 FASTQ NA 1df6b341-bdaf-4768-b1e7-356a5f6fa66c ea22565c1c3ce1feaf58f2249cbaca08 NA Primary Tumor C3L-02618.RNA-Seq.R2.A C3L-02618 LSCC RNA-Seq tissue_normal CPT0241840009 200505_UNC32-K00270_0245_AHH5FVBBXY_AGTTCAGG-CCAACAGA_S9_L007_R2_001.fastq.gz 3989295347 FASTQ NA f0a9938b-4a76-49d7-a438-5c5fbb275fa6 80e10812629391d8708319781fae1bd9 NA Solid Tissue Normal C3L-02618.RNA-Seq.R2.T C3L-02618 LSCC RNA-Seq tumor CPT0241660009 200428_UNC32-K00270_0243_AHG3Y3BBXY_CTACGACA-GAGTCCAA_S6_L002_R2_001.fastq.gz 4336151531 FASTQ NA eb266e50-5c8a-4e65-aa08-f9c037a45f46 143f46f938ee5f33f9e183ca5d125ed2 NA Primary Tumor C3L-02618.WGS.N C3L-02618 LSCC WGS blood_normal CPT0241930002 CPT0241930002.WholeGenome.RP-2158.bam 19495973747 BAM NA 292bb6a2-6ac0-43d0-bf8a-9be498895b45 19488fee154b63e55b0005dd323f181e hg19 Blood Derived Normal +C3L-02618.WGS.N.hg38 C3L-02618 LSCC WGS blood_normal CPT0241930002 0ef644e0-864e-46a0-8539-b5c476cb0739_wgs_gdc_realn.bam 57729873603 BAM NA f47749cb-0565-4d5f-913e-45ed04aa8ff5 9b7ae4df3378745cde142e1b3fc04290 hg38 Blood Derived Normal C3L-02618.WGS.T C3L-02618 LSCC WGS tumor CPT0241660006 CPT0241660006.WholeGenome.RP-2158.bam 22137845556 BAM NA 9fdb93bd-25a9-476b-983c-b4db9e850577 896a6d10eeb858e0e3682052896b00ac hg19 Primary Tumor +C3L-02618.WGS.T.hg38 C3L-02618 LSCC WGS tumor CPT0241660006 b233ed86-5554-4dcc-af8e-51fab4b8befa_wgs_gdc_realn.bam 66785654607 BAM NA 2f09606d-6c27-4c48-9f90-c8b4987fdb3f 4297abf36ecf62ea6d90bcb1f318de84 hg38 Primary Tumor C3L-02618.WXS.A C3L-02618 LSCC WXS tissue_normal CPT0241840006 CPT0241840006.WholeExome.RP-1303.bam 22249399235 BAM NA 2d8928c7-2ecb-46a4-9c0d-c8ab9e4d271f df706bf7e011a5f8b0a52d6e8754b245 hg19 Solid Tissue Normal C3L-02618.WXS.N C3L-02618 LSCC WXS blood_normal CPT0241930002 CPT0241930002.WholeExome.RP-1303.bam 22789677761 BAM NA e98929a7-f5aa-46d3-8fac-64727655594c c81cf922bdc4a9bd108b31dfb57352af hg19 Blood Derived Normal C3L-02618.WXS.T C3L-02618 LSCC WXS tumor CPT0241660006 CPT0241660006.WholeExome.RP-1303.bam 19580821549 BAM NA f16ddfe5-ad2a-4866-8070-e5db53d6d11c dbfba0259b8636091a4abeed2b8e38c7 hg19 Primary Tumor @@ -10024,10 +10055,13 @@ C3L-02643.WXS.T.hg38 C3L-02643 LUAD WXS tumor CPT0204430007 6d8f8127-ca6c-4e64-9 C3L-02644.MethArray.Green.T C3L-02644 GBM Methylation Array tumor CPT0227810007 204367490093_R02C01_Grn.idat 13677900 IDAT Green 6d87bace-c3c9-4958-9143-6a34d0362044 633c529954a66450f9083c7b5a01ed0d NA Primary Tumor C3L-02644.MethArray.Red.T C3L-02644 GBM Methylation Array tumor CPT0227810007 204367490093_R02C01_Red.idat 13677900 IDAT Red dcf2f0e2-ff58-406c-97e3-d757907bcd11 ff4097dd3e1dedf8f54eb32858463177 NA Primary Tumor C3L-02644.miRNA-Seq.T C3L-02644 GBM miRNA-Seq tumor CPT0227810010 200403_UNC31-K00269_0274_AHCF7GBBXY_CCGTCC_S40_L002_R1_001.unaln.bam 198821121 BAM NA 827c1489-052e-4eef-a733-e76d03044ff1 95f572043d34346a5c9f22aff3d40a67 NA Primary Tumor +C3L-02644.miRNA-Seq.T.hg38 C3L-02644 GBM miRNA-Seq tumor CPT0227810010 0fa0e305-2995-463b-b909-bec0df468cb0_mirnaseq_gdc_realn.bam 222417745 BAM NA 9db07d7e-0f32-423c-83d6-e1ae2d3d3d0b e57d81f01b57a4d9d3e54262b0f93763 hg38 Primary Tumor C3L-02644.RNA-Seq.R1.T C3L-02644 GBM RNA-Seq tumor CPT0227810010 200204_UNC31-K00269_0263_AHG2CJBBXY_AATCCGGA-CTACAGTT_S8_L002_R1_001.fastq.gz 3584181669 FASTQ NA e7a4ea3c-9561-401b-9378-7ec621b038ea 5620b26bba1e17463c8c58ec7d352c0f NA Primary Tumor C3L-02644.RNA-Seq.R2.T C3L-02644 GBM RNA-Seq tumor CPT0227810010 200204_UNC31-K00269_0263_AHG2CJBBXY_AATCCGGA-CTACAGTT_S8_L002_R2_001.fastq.gz 4274180966 FASTQ NA 10aec24b-bc0f-4ee3-9179-a94b8da520f4 859d04392f23dbf23daffd5bdbb09f65 NA Primary Tumor C3L-02644.WGS.N C3L-02644 GBM WGS blood_normal CPT0227900002 CPT0227900002.WholeGenome.RP-2158.bam 26226631010 BAM NA 91b131b2-0290-462e-b311-60d4e39aba78 63564d8473d7def7428d2607a95ecdde hg19 Blood Derived Normal +C3L-02644.WGS.N.hg38 C3L-02644 GBM WGS blood_normal CPT0227900002 6cdbd613-0752-40a2-9347-582356daf34f_wgs_gdc_realn.bam 76860325745 BAM NA 45a5b3d6-b371-4bf2-8477-3e06f8b6cb56 0e217be205a8f8c0886828381556548a hg38 Blood Derived Normal C3L-02644.WGS.T C3L-02644 GBM WGS tumor CPT0227810007 CPT0227810007.WholeGenome.RP-2158.bam 27527064714 BAM NA a13b5822-be39-4ba1-9f54-902e9df06f95 10e67e30e7ed2c87dcfa21fad0d27284 hg19 Primary Tumor +C3L-02644.WGS.T.hg38 C3L-02644 GBM WGS tumor CPT0227810007 46bef5ac-320b-47da-8f0b-ba57db403534_wgs_gdc_realn.bam 83884571975 BAM NA fac8453c-2278-4a7a-8cca-571fb949d33e 47529e22657085a84e5a6a4e2b3f7c40 hg38 Primary Tumor C3L-02644.WXS.N C3L-02644 GBM WXS blood_normal CPT0227900002 CPT0227900002.WholeExome.RP-1303.bam 27011094237 BAM NA fc2e0bde-e7ba-4acb-8f99-eebdbb532cda b56eb09f3dcb775ad9abb1a7e8296272 hg19 Blood Derived Normal C3L-02644.WXS.T C3L-02644 GBM WXS tumor CPT0227810007 CPT0227810007.WholeExome.RP-1303.bam 16766796957 BAM NA 64803679-490c-4aa5-8cb4-dc077cf3c19a 36d278226a74e239dca2819d500522bf hg19 Primary Tumor C3L-02646.MethArray.Green.T C3L-02646 LSCC Methylation Array tumor CPT0202530007 203219640158_R04C01_Grn.idat 13676216 IDAT Green a6d083c3-1574-488e-9491-a1fa7b2ad366 b2a4921d7dee795e55338c3b24d5076c NA Primary Tumor @@ -10259,7 +10293,9 @@ C3L-02662.miRNA-Seq.T C3L-02662 GBM miRNA-Seq tumor CPT0267260010 200526_UNC32-K C3L-02662.RNA-Seq.R1.T C3L-02662 GBM RNA-Seq tumor CPT0267260010 200204_UNC31-K00269_0263_AHG2CJBBXY_TTACAGGA-TGACAAGC_S22_L006_R1_001.fastq.gz 2651283628 FASTQ NA 356afdb9-db72-4527-92b6-80619daf6746 d26d68a575049099ea1e7251c56d81ff NA Primary Tumor C3L-02662.RNA-Seq.R2.T C3L-02662 GBM RNA-Seq tumor CPT0267260010 200204_UNC31-K00269_0263_AHG2CJBBXY_TTACAGGA-TGACAAGC_S22_L006_R2_001.fastq.gz 3036287263 FASTQ NA 45e95154-6823-4405-a610-9a42d4bc5f10 af9dca0e728ed9683ff8bceaf129692c NA Primary Tumor C3L-02662.WGS.N C3L-02662 GBM WGS blood_normal CPT0267300002 CPT0267300002.WholeGenome.RP-2158.bam 27090249079 BAM NA 6cc40b60-9b11-429c-8f10-f679c36a10fc ff6b361feffc7b1144fd26ce74ede696 hg19 Blood Derived Normal +C3L-02662.WGS.N.hg38 C3L-02662 GBM WGS blood_normal CPT0267300002 ffb389b7-11c3-4f48-acc0-9e3c62e1dbd9_wgs_gdc_realn.bam 81374312262 BAM NA bfb3b98e-daac-48dc-bd69-85c8886a45c5 2a79a68ab2ae20bc1d9410c7c80c18d1 hg38 Blood Derived Normal C3L-02662.WGS.T C3L-02662 GBM WGS tumor CPT0267260007 CPT0267260007.WholeGenome.RP-2158.bam 27579170879 BAM NA 8af676a8-afcb-4679-81a6-934725ebdbdb 3b5ecf88bcf0f0be09c67e0cdbe66c37 hg19 Primary Tumor +C3L-02662.WGS.T.hg38 C3L-02662 GBM WGS tumor CPT0267260007 48a74119-daeb-4577-9c10-649d7d71f72e_wgs_gdc_realn.bam 81794446548 BAM NA c3462153-48c2-4ced-9b84-4179b0f08cb3 41513633e8fcfeb10817e83e3e2eb66f hg38 Primary Tumor C3L-02662.WXS.N C3L-02662 GBM WXS blood_normal CPT0267300002 CPT0267300002.WholeExome.RP-1303.bam 32172440712 BAM NA 11e768f6-702e-4217-9405-d7e2e8b3549a 8e18f4ac617a324a85f0ec82e50538a5 hg19 Blood Derived Normal C3L-02662.WXS.T C3L-02662 GBM WXS tumor CPT0267260007 CPT0267260007.WholeExome.RP-1303.bam 18842860859 BAM NA 548aa728-a7c4-4fd3-b9a1-56debfc0fb08 a60030039eab8e53bd06465c9a3101b4 hg19 Primary Tumor C3L-02665.MethArray.Green.A C3L-02665 LSCC Methylation Array tissue_normal CPT0192590010 203220070171_R04C01_Grn.idat 13676216 IDAT Green 6d72576a-ee69-4cb9-b497-6c97aece1cce 91ae62b92b69201ad3d5791c26c71954 NA Solid Tissue Normal @@ -10366,6 +10402,8 @@ C3L-02705.RNA-Seq.genomic.T.hg38 C3L-02705 GBM RNA-Seq tumor CPT0189650010 ebbf2 C3L-02705.RNA-Seq.R1.T C3L-02705 GBM RNA-Seq tumor CPT0189650010 181218_UNC32-K00270_0138_AH32HMBBXY_GATCAG_S9_L003_R1_001.fastq.gz 3323782301 FASTQ NA 31ad97f9-8f0a-4939-9b27-aeecc345925d fdb618addcb5c7d16260e6059d1cecc4 NA Primary Tumor C3L-02705.RNA-Seq.R2.T C3L-02705 GBM RNA-Seq tumor CPT0189650010 181218_UNC32-K00270_0138_AH32HMBBXY_GATCAG_S9_L003_R2_001.fastq.gz 3599944937 FASTQ NA 593ce048-3cf6-4a27-8c02-e81b2b48d95f edfa38aabdcbe976b181ef2ca8e404a1 NA Primary Tumor C3L-02705.RNA-Seq.transcriptome.T.hg38 C3L-02705 GBM RNA-Seq tumor CPT0189650010 ebbf2f51-93d0-43f4-bee0-fa52858127eb.rna_seq.transcriptome.gdc_realn.bam 7149920268 BAM transcriptome 60a89a72-d423-4eef-89d0-acee416cc7e0 558ce88424d4c88d767ea0754edc9e8d hg38 Primary Tumor +C3L-02705.scRNA-Seq.R1.T C3L-02705 GBM scRNA-Seq tumor CPT0189650015 20200616_WUSTL_CPT0189650015_CGTTAATC-GCCACGCT-TTACTCAG-AAGGGTGA_S3_L003_R1_001.fastq.gz 10955017630 FASTQ NA 1f4d56f2-61d3-4c05-a994-a1db1fdc5323 d9e00f0c966dd4c2969aa4defa82b200 NA Primary Tumor +C3L-02705.scRNA-Seq.R2.T C3L-02705 GBM scRNA-Seq tumor CPT0189650015 20200616_WUSTL_CPT0189650015_CGTTAATC-GCCACGCT-TTACTCAG-AAGGGTGA_S3_L003_R2_001.fastq.gz 25217192545 FASTQ NA 4ef75921-f1d4-427e-88f2-2fd9e86fba92 8714fda1daa56a390c20e745dcdf5987 NA Primary Tumor C3L-02705.WGS.N C3L-02705 GBM WGS blood_normal CPT0190640002 CPT0190640002.WholeGenome.RP-1303.bam 55336589099 BAM NA 6218ca2a-3ec4-4ef6-83a3-ae00c9d83d12 e5149cb9803dd4cc33bb0c89b4d38afb hg19 Blood Derived Normal C3L-02705.WGS.N.hg38 C3L-02705 GBM WGS blood_normal CPT0190640002 a820c7e7-180a-47e8-ad00-12e32236bbdf_wgs_gdc_realn.bam 80337375536 BAM NA 54197100-227c-4760-9df9-5c9f6e7df598 e6bde5807083cf3c0c2a1b14c76511c0 hg38 Blood Derived Normal C3L-02705.WGS.T C3L-02705 GBM WGS tumor CPT0189650007 CPT0189650007.WholeGenome.RP-1303.bam 62119934828 BAM NA 9127722a-7be2-446a-8639-7759914ab1f2 7f3328e7e724154bbc4cd53c3410fe17 hg19 Primary Tumor @@ -11524,10 +11562,13 @@ C3L-03371.WXS.T.high_cov C3L-03371 PDA WXS tumor CPT0275870006 CPT0275870006.Who C3L-03372.MethArray.Green.T C3L-03372 GBM Methylation Array tumor CPT0275960006 204367490151_R06C01_Grn.idat 13677895 IDAT Green e714040a-6402-4235-8292-63a0077c85c2 a8c7973335fcf6bff8a1c4932d58af0e NA Primary Tumor C3L-03372.MethArray.Red.T C3L-03372 GBM Methylation Array tumor CPT0275960006 204367490151_R06C01_Red.idat 13677895 IDAT Red 17e7d89a-fd06-4bbb-a052-1c0b3e40daa6 23f82e1c55875aef2fbb1391b678d076 NA Primary Tumor C3L-03372.miRNA-Seq.T C3L-03372 GBM miRNA-Seq tumor CPT0275960009 200403_UNC31-K00269_0274_AHCF7GBBXY_ATGTCA_S39_L002_R1_001.unaln.bam 252595654 BAM NA 3791b8ee-e0dc-4638-bb42-2f3763171e50 faaa0479a28cd0a70b8f588d2565196e NA Primary Tumor +C3L-03372.miRNA-Seq.T.hg38 C3L-03372 GBM miRNA-Seq tumor CPT0275960009 dc89a039-334e-4161-bf3c-fb08ce3dd668_mirnaseq_gdc_realn.bam 282560822 BAM NA e97614e1-f3b1-4cdd-a1b0-a63d474ba783 45f7d02d9b7e385c8bb305bc972d44a7 hg38 Primary Tumor C3L-03372.RNA-Seq.R1.T C3L-03372 GBM RNA-Seq tumor CPT0275960009 200204_UNC31-K00269_0263_AHG2CJBBXY_GGCTTAAG-TCGTGACC_S7_L002_R1_001.fastq.gz 3400877684 FASTQ NA 8109363c-1835-4a99-92e2-e83b25a6b90f 94383d7fc37e6af11f3fb4ac899ce35d NA Primary Tumor C3L-03372.RNA-Seq.R2.T C3L-03372 GBM RNA-Seq tumor CPT0275960009 200204_UNC31-K00269_0263_AHG2CJBBXY_GGCTTAAG-TCGTGACC_S7_L002_R2_001.fastq.gz 3920350038 FASTQ NA 650b80e4-de52-493d-98b9-8ba98fbf901b 5b6ef1a8229a5a1fcb8ca0eff1ec47c0 NA Primary Tumor C3L-03372.WGS.N C3L-03372 GBM WGS blood_normal CPT0265940002 CPT0265940002.WholeGenome.RP-2158.bam 30822237663 BAM NA 31a89f6d-8060-4ffa-b67c-ee7de92e385b 1fdd13b9a447363b79781da3cf237559 hg19 Blood Derived Normal +C3L-03372.WGS.N.hg38 C3L-03372 GBM WGS blood_normal CPT0265940002 69294b54-61df-4d78-a0da-7e5f1420368c_wgs_gdc_realn.bam 90435302917 BAM NA e93293ef-83a7-4e72-8e5d-632a9ae6fb51 b9de531a0dc0c01ebe82d3e294c10f60 hg38 Blood Derived Normal C3L-03372.WGS.T C3L-03372 GBM WGS tumor CPT0275960006 CPT0275960006.WholeGenome.RP-2158.bam 21511353026 BAM NA 3768276d-ccd5-42ab-a4ed-ef40990aa5b0 bcef20db68bb6f428a67c53357ef354f hg19 Primary Tumor +C3L-03372.WGS.T.hg38 C3L-03372 GBM WGS tumor CPT0275960006 0f606cd0-59c7-4da4-be52-58226d2b3cd5_wgs_gdc_realn.bam 62585754770 BAM NA 4fe1828b-c264-4376-b62e-0625433cb229 78f0ad18479f315900a7904c4f0c5479 hg38 Primary Tumor C3L-03372.WXS.N C3L-03372 GBM WXS blood_normal CPT0265940002 CPT0265940002.WholeExome.RP-1303.bam 21429808831 BAM NA 5a23c514-da2a-4366-bd23-dd31907fbc9f 7b1771feaaa492922b1b87362df611f6 hg19 Blood Derived Normal C3L-03372.WXS.T C3L-03372 GBM WXS tumor CPT0275960006 CPT0275960006.WholeExome.RP-1303.bam 20594156903 BAM NA 7ffb97bc-1694-49bb-aa91-9bdccd83d539 199d2579fa9baadd047e8b72a7488b61 hg19 Primary Tumor C3L-03378.MethArray.Green.A C3L-03378 HNSCC Methylation Array tissue_normal CPT0199890006 203219650047_R07C01_Grn.idat 13676206 IDAT Green 8c8121bd-3054-4f6e-96b2-308969eef29b c9e7e8a6d51f28c36f824b900ac9f415 NA Solid Tissue Normal @@ -11564,7 +11605,9 @@ C3L-03385.miRNA-Seq.T C3L-03385 GBM miRNA-Seq tumor CPT0239860013 200526_UNC32-K C3L-03385.RNA-Seq.R1.T C3L-03385 GBM RNA-Seq tumor CPT0239860013 200212_UNC31-K00269_0265_BHGCWGBBXY_GCAATGCA-GGAACGTT_S17_L005_R1_001.fastq.gz 3722386896 FASTQ NA fd7264e4-2ec0-41a4-8c9e-9ca41deefdf1 a5292248c7498c1bfbd864f3b0e567d4 NA Primary Tumor C3L-03385.RNA-Seq.R2.T C3L-03385 GBM RNA-Seq tumor CPT0239860013 200212_UNC31-K00269_0265_BHGCWGBBXY_GCAATGCA-GGAACGTT_S17_L005_R2_001.fastq.gz 4036563635 FASTQ NA bad51e82-edda-4dae-9ae2-a378a2c50866 cc1f4db229f124174205692fef638689 NA Primary Tumor C3L-03385.WGS.N C3L-03385 GBM WGS blood_normal CPT0240540002 CPT0240540002.WholeGenome.RP-2158.bam 24847212386 BAM NA 347cc10e-8a2e-464b-95a8-46c9bf006c10 90391fd8422d260364fc6daeb7b1d4dc hg19 Blood Derived Normal +C3L-03385.WGS.N.hg38 C3L-03385 GBM WGS blood_normal CPT0240540002 f13892e5-c2c7-44c2-84eb-9d1d70cd5508_wgs_gdc_realn.bam 70348014229 BAM NA 9ddf2838-9c6e-46f8-a6fe-7df5a229e159 d60ccc4c3cedf7bc33c293eebbb6edcc hg38 Blood Derived Normal C3L-03385.WGS.T C3L-03385 GBM WGS tumor CPT0239860006 CPT0239860006.WholeGenome.RP-2158.bam 23002457535 BAM NA e239e5f5-1111-4506-9c6f-45dde5665e7a 854b57a0e15dadf2454adfe0db6bb65f hg19 Primary Tumor +C3L-03385.WGS.T.hg38 C3L-03385 GBM WGS tumor CPT0239860006 d623559b-eaeb-4754-ad9a-9884f01c60a7_wgs_gdc_realn.bam 68019906430 BAM NA 1247c8ff-9ca8-448b-9a6b-fcf0385dde94 0cd8512ce89dd7f07cfcf967f690b5c8 hg38 Primary Tumor C3L-03385.WXS.N C3L-03385 GBM WXS blood_normal CPT0240540002 CPT0240540002.WholeExome.RP-1303.bam 23859008288 BAM NA 7a89fc2e-3585-46d6-8832-3ac8e1b618ef 414cd571b8e03c1499ed2b1ecd61928b hg19 Blood Derived Normal C3L-03385.WXS.T C3L-03385 GBM WXS tumor CPT0239860006 CPT0239860006.WholeExome.RP-1303.bam 18539111036 BAM NA 2240b4a0-874d-40e3-b446-d018f18f318d dca90fc0af41cbc47e3ff22cdb07c0ca hg19 Primary Tumor C3L-03387.MethArray.Green.T C3L-03387 GBM Methylation Array tumor CPT0224330009 203271750057_R04C01_Grn.idat 13676206 IDAT Green d2f2840a-3282-4bdf-9146-4703151b0f2e fd21ffc9e751a7550407efc68a77d761 NA Primary Tumor @@ -11890,6 +11933,7 @@ C3L-03547.WXS.T C3L-03547 GBM WXS tumor CPT0324550012 CPT0324550012.WholeExome.R C3L-03554.MethArray.Green.T C3L-03554 GBM Methylation Array tumor CPT0301020013 204367490084_R01C01_Grn.idat 13677890 IDAT Green 73656aac-a776-41e7-aa2c-9156a1db10d2 16ef6a86f10934b91268da08cf6837f3 NA Primary Tumor C3L-03554.MethArray.Red.T C3L-03554 GBM Methylation Array tumor CPT0301020013 204367490084_R01C01_Red.idat 13677890 IDAT Red 989acb02-704c-457a-85fd-c1615e3769ab 30bf311db6338d5d351572d4ac9b9f90 NA Primary Tumor C3L-03554.miRNA-Seq.T C3L-03554 GBM miRNA-Seq tumor CPT0301020009 200513_UNC31-K00269_0278_BHH7Y7BBXY_TCGGCA_S48_L008_R1_001.unaln.bam 174106631 BAM NA 932730cd-4f17-4673-af52-c5481bd7fd19 fe8bd62f1864631a5a4bdca444ded014 NA Primary Tumor +C3L-03554.miRNA-Seq.T.hg38 C3L-03554 GBM miRNA-Seq tumor CPT0301020009 eeff1666-b3f6-4288-bb9a-e853082318bf_mirnaseq_gdc_realn.bam 189236347 BAM NA f40203ef-0fa7-43f7-9b8b-ff28be114656 edb8dfdda1e840eef21e34b74953eac7 hg38 Primary Tumor C3L-03554.RNA-Seq.R1.T C3L-03554 GBM RNA-Seq tumor CPT0301020009 200218_UNC31-K00269_0266_AHGKHKBBXY_TTGCCTAG-ACCACTTA_S57_L005_R1_001.fastq.gz 3899755735 FASTQ NA 3ecffe17-acc9-4237-87d5-b49163949ae1 f0c9434786f7b2d59f298323aa7f379c NA Primary Tumor C3L-03554.RNA-Seq.R2.T C3L-03554 GBM RNA-Seq tumor CPT0301020009 200218_UNC31-K00269_0266_AHGKHKBBXY_TTGCCTAG-ACCACTTA_S57_L005_R2_001.fastq.gz 4293118449 FASTQ NA da382358-3321-40ea-9631-b0f9586382bd ec376198699479e338296a8b2b286692 NA Primary Tumor C3L-03554.WGS.N C3L-03554 GBM WGS blood_normal CPT0301140002 CPT0301140002.WholeGenome.RP-2158.bam 28438834375 BAM NA f296d127-c60b-486d-92d9-8e88f8046a5c f23cb0c1539c6a3e7aedd9bcf6f6ab5f hg19 Blood Derived Normal @@ -11899,22 +11943,27 @@ C3L-03554.WXS.T C3L-03554 GBM WXS tumor CPT0301020013 CPT0301020013.WholeExome.R C3L-03557.MethArray.Green.T C3L-03557 GBM Methylation Array tumor CPT0324870006 204367490066_R07C01_Grn.idat 13677900 IDAT Green 04c51431-4dce-4f99-b3ef-58c222d5938a 42877f8f9bfe76095d78bd52ae100a6c NA Primary Tumor C3L-03557.MethArray.Red.T C3L-03557 GBM Methylation Array tumor CPT0324870006 204367490066_R07C01_Red.idat 13677900 IDAT Red 8ace8ca2-8666-4cbc-98ef-145fe7ce060e 7024e79fbf4aef3c7df6fb69cfb32dd1 NA Primary Tumor C3L-03557.miRNA-Seq.T C3L-03557 GBM miRNA-Seq tumor CPT0324870009 200513_UNC31-K00269_0278_BHH7Y7BBXY_ACTGAT_S25_L008_R1_001.unaln.bam 257577074 BAM NA 054a26bf-435e-4835-9235-12f9c1271a4a 1074c20855bd6cdd87deb6f081263d20 NA Primary Tumor +C3L-03557.miRNA-Seq.T.hg38 C3L-03557 GBM miRNA-Seq tumor CPT0324870009 6c26c40d-7d6b-461f-851b-bf23d0a1a5e4_mirnaseq_gdc_realn.bam 289913765 BAM NA f8d96186-de3b-4573-b595-552c183c7b65 d3ee3eef6c4c01829439cd4cdeec7522 hg38 Primary Tumor C3L-03557.RNA-Seq.R1.T C3L-03557 GBM RNA-Seq tumor CPT0324870009 200505_UNC31-K00269_0277_AHGFKNBBXY_CAATTAAC-CGAGATAT_S26_L007_R1_001.fastq.gz 3467165766 FASTQ NA f757407c-6345-4a7f-b3eb-d1e7062dc6ed 6bf1f485e464e1caaceecb5e27f13213 NA Primary Tumor C3L-03557.RNA-Seq.R2.T C3L-03557 GBM RNA-Seq tumor CPT0324870009 200505_UNC31-K00269_0277_AHGFKNBBXY_CAATTAAC-CGAGATAT_S26_L007_R2_001.fastq.gz 3814209403 FASTQ NA 4c4e0d47-d00e-4ab7-a4b5-8144f6cb4a38 022f45850475cad0714272bf71fd139e NA Primary Tumor C3L-03557.WGS.N C3L-03557 GBM WGS blood_normal CPT0324980002 CPT0324980002.WholeGenome.RP-2158.bam 26883092391 BAM NA 80b37c1a-a0cb-4de3-b680-b7349bf80aab 3b54e6f0e1955b0e96b597927d0992b8 hg19 Blood Derived Normal C3L-03557.WGS.T C3L-03557 GBM WGS tumor CPT0324870006 CPT0324870006.WholeGenome.RP-2158.bam 25136506176 BAM NA 37350133-a637-4dc2-b959-aa4ff26b6db3 0e3fb081da0e2f277f6d64901646f83d hg19 Primary Tumor C3L-03557.WXS.N C3L-03557 GBM WXS blood_normal CPT0324980002 CPT0324980002.WholeExome.RP-1303.bam 21448562649 BAM NA cd818876-b369-4bbd-808d-40e74f6102bf 81aaaf0e171b63136795d533a477907a hg19 Blood Derived Normal +C3L-03557.WXS.T C3L-03557 GBM WXS tumor CPT0324870006 CPT0324870006.WholeExome.RP-1303.bam 44227197517 BAM NA 7b87ddd0-0660-46b6-8537-a8353b5fce92 452188fd1e0b499449196ff83f08a824 hg19 Primary Tumor C3L-03559.MethArray.Green.T C3L-03559 GBM Methylation Array tumor CPT0325020006 204367470132_R06C01_Grn.idat 13677880 IDAT Green 1c35efb4-6421-42c8-95c9-4af73220f715 7dac5a51aa30f1d55def3596981a0526 NA Primary Tumor C3L-03559.MethArray.Red.T C3L-03559 GBM Methylation Array tumor CPT0325020006 204367470132_R06C01_Red.idat 13677880 IDAT Red a20a27d6-19b0-47d5-b6d2-e481ef758795 9dc46cafd084075cc69a054e99340a4b NA Primary Tumor C3L-03559.miRNA-Seq.T C3L-03559 GBM miRNA-Seq tumor CPT0325020009 200513_UNC31-K00269_0278_BHH7Y7BBXY_ATGAGC_S26_L008_R1_001.unaln.bam 173690875 BAM NA d3969466-da2b-48cb-921a-454fb47fc6d5 68ccac65346454894d7fbd52df751a2f NA Primary Tumor +C3L-03559.miRNA-Seq.T.hg38 C3L-03559 GBM miRNA-Seq tumor CPT0325020009 2cf44df8-8374-4c17-9114-2d4bfeec505a_mirnaseq_gdc_realn.bam 194480451 BAM NA 02249172-3d82-4e5a-b8e1-3abff3fe2f5a 793acf9f1dba99806f52b1468a601307 hg38 Primary Tumor C3L-03559.RNA-Seq.R1.T C3L-03559 GBM RNA-Seq tumor CPT0325020009 200505_UNC31-K00269_0277_AHGFKNBBXY_TGGCCGGT-TAGAGCGC_S28_L007_R1_001.fastq.gz 4283684848 FASTQ NA b7fe5718-d6a9-4141-a694-92ea00086026 7e63accebca335aeeda151d46ada2358 NA Primary Tumor C3L-03559.RNA-Seq.R2.T C3L-03559 GBM RNA-Seq tumor CPT0325020009 200505_UNC31-K00269_0277_AHGFKNBBXY_TGGCCGGT-TAGAGCGC_S28_L007_R2_001.fastq.gz 4826363865 FASTQ NA 7a894735-c289-4136-aafa-d72edb275143 ba0dd7458045ce6457d2d8e680d040ee NA Primary Tumor C3L-03559.WGS.N C3L-03559 GBM WGS blood_normal CPT0325150002 CPT0325150002.WholeGenome.RP-2158.bam 22612865776 BAM NA de4df845-6738-4a7f-8e53-fad12668cc6a 15bad7778672f3e1d3184897a47da52c hg19 Blood Derived Normal C3L-03559.WGS.T C3L-03559 GBM WGS tumor CPT0325020006 CPT0325020006.WholeGenome.RP-2158.bam 23774365276 BAM NA 8b8714f9-c726-4065-81ae-9810358794dd 311fa704d92a0a41947e8fdddad2fa14 hg19 Primary Tumor C3L-03559.WXS.N C3L-03559 GBM WXS blood_normal CPT0325150002 CPT0325150002.WholeExome.RP-1303.bam 18968957435 BAM NA c36db34f-b4f2-426e-8cec-5750503ce384 1a6117e4d7366b61f9ea80f456fe89f3 hg19 Blood Derived Normal +C3L-03559.WXS.T C3L-03559 GBM WXS tumor CPT0325020006 CPT0325020006.WholeExome.RP-1303.bam 50983463565 BAM NA 861962ca-4ed2-451f-91e7-1bbe41af9e37 5caaff179c7d049188d52f956924c667 hg19 Primary Tumor C3L-03588.MethArray.Green.T C3L-03588 GBM Methylation Array tumor CPT0300710006 204372030079_R06C01_Grn.idat 13677880 IDAT Green 99cbf7c9-d20c-4694-97e1-1abd3bae1bb3 54220557de152e1ea10808b91fbee2ca NA Primary Tumor C3L-03588.MethArray.Red.T C3L-03588 GBM Methylation Array tumor CPT0300710006 204372030079_R06C01_Red.idat 13677880 IDAT Red 28c3c2c9-dc50-489d-81cc-80bc5b939110 c64982e6917422599217a7789be212cf NA Primary Tumor C3L-03588.miRNA-Seq.T C3L-03588 GBM miRNA-Seq tumor CPT0300710009 200513_UNC31-K00269_0278_BHH7Y7BBXY_TATAAT_S44_L008_R1_001.unaln.bam 331581993 BAM NA 7f0d5dbb-4f41-4100-83d9-7cf9a2db48a2 1741a844b13437534539dff5d87bb352 NA Primary Tumor +C3L-03588.miRNA-Seq.T.hg38 C3L-03588 GBM miRNA-Seq tumor CPT0300710009 5d2bae2c-2da7-4386-b6ce-aebb617ec002_mirnaseq_gdc_realn.bam 364147390 BAM NA 030643d3-8cad-49d5-9391-f833d17079d1 43879dd371b3548e711ea66bf7be7f6b hg38 Primary Tumor C3L-03588.RNA-Seq.R1.T C3L-03588 GBM RNA-Seq tumor CPT0300710009 200218_UNC31-K00269_0266_AHGKHKBBXY_GATCTATC-ATGAGGCT_S63_L007_R1_001.fastq.gz 3716042268 FASTQ NA 125972b5-4526-4f1e-b0be-eff967b1ed1e ccf6b030eec492338338525fcfcec22b NA Primary Tumor C3L-03588.RNA-Seq.R2.T C3L-03588 GBM RNA-Seq tumor CPT0300710009 200218_UNC31-K00269_0266_AHGKHKBBXY_GATCTATC-ATGAGGCT_S63_L007_R2_001.fastq.gz 3951154756 FASTQ NA 3e05990f-cdf7-43cc-a667-dd6b824ea2be e02ffdc246bba08cc370237ce60d315c NA Primary Tumor C3L-03588.WGS.N C3L-03588 GBM WGS blood_normal CPT0301000002 CPT0301000002.WholeGenome.RP-2158.bam 23149289719 BAM NA 279eace3-b8de-4e44-8c71-2999ace91236 78bba36189509a74af0f7ca0f86a0795 hg19 Blood Derived Normal @@ -12249,19 +12298,25 @@ C3L-03728.WXS.T.hg38 C3L-03728 GBM WXS tumor CPT0225760006 269ffccf-de74-4303-8d C3L-03735.MethArray.Green.T C3L-03735 GBM Methylation Array tumor CPT0264120006 204372030139_R02C01_Grn.idat 13677880 IDAT Green 1f3898f2-8567-4571-9c7e-6701ab7e09b2 e4ea6995a9d4330685d9c6c88da21b46 NA Primary Tumor C3L-03735.MethArray.Red.T C3L-03735 GBM Methylation Array tumor CPT0264120006 204372030139_R02C01_Red.idat 13677880 IDAT Red 97fac48f-ce44-476b-b272-67f76253e6f8 b220788c886cc9e8318244659e95dda1 NA Primary Tumor C3L-03735.miRNA-Seq.T C3L-03735 GBM miRNA-Seq tumor CPT0264120009 200403_UNC31-K00269_0274_AHCF7GBBXY_CAACTA_S5_L001_R1_001.unaln.bam 263228813 BAM NA fa531fa4-4220-40f6-8a5d-1241957f540c c0d9e90d92febf9ea2a53179e4419985 NA Primary Tumor +C3L-03735.miRNA-Seq.T.hg38 C3L-03735 GBM miRNA-Seq tumor CPT0264120009 ccc75cf4-aaac-47ab-8dd1-9fb1b8e8c38a_mirnaseq_gdc_realn.bam 290946160 BAM NA bcadc513-5cc4-4fcd-a3fc-4cd9f26e1265 ce6708b82f2dc00ec8553b99617812db hg38 Primary Tumor C3L-03735.RNA-Seq.R1.T C3L-03735 GBM RNA-Seq tumor CPT0264120009 200218_UNC31-K00269_0266_AHGKHKBBXY_CCGTGAAG-CAGTGGAT_S54_L005_R1_001.fastq.gz 4085825069 FASTQ NA fee8bb2a-2dba-4d0a-9e4b-e7ebe60fe998 7a81966aa194b821b5c8a5374a282c11 NA Primary Tumor C3L-03735.RNA-Seq.R2.T C3L-03735 GBM RNA-Seq tumor CPT0264120009 200218_UNC31-K00269_0266_AHGKHKBBXY_CCGTGAAG-CAGTGGAT_S54_L005_R2_001.fastq.gz 4505460324 FASTQ NA 0552d99d-65f1-45ec-8a79-41d6de621a90 f8af80602ba31cbb4a4650e3bd6be82a NA Primary Tumor C3L-03735.WGS.N C3L-03735 GBM WGS blood_normal CPT0265770002 CPT0265770002.WholeGenome.RP-2158.bam 30302599855 BAM NA 15654810-dd84-4d60-b564-a09430083c09 bd543e3919839303d126dc6bb82f5e66 hg19 Blood Derived Normal +C3L-03735.WGS.N.hg38 C3L-03735 GBM WGS blood_normal CPT0265770002 e7d56953-30f9-417c-9e40-1462762bea4f_wgs_gdc_realn.bam 90921510968 BAM NA 12fe818c-9d4e-47ea-b5d5-b697846bbecb bb0201c80c21f189595e46a7e18bf710 hg38 Blood Derived Normal C3L-03735.WGS.T C3L-03735 GBM WGS tumor CPT0264120006 CPT0264120006.WholeGenome.RP-2158.bam 25957361172 BAM NA 528458ab-ac6e-401f-8f36-1d58b1412a89 b72dabf1b77615c8b8107fbbed0e8e23 hg19 Primary Tumor +C3L-03735.WGS.T.hg38 C3L-03735 GBM WGS tumor CPT0264120006 8cf70493-a5d8-4a66-af1d-89028cb10621_wgs_gdc_realn.bam 74067454129 BAM NA 2273e09f-c959-4216-b55b-8f39dd971741 da587998e33995b1a0f86f3d3b20dfee hg38 Primary Tumor C3L-03735.WXS.N C3L-03735 GBM WXS blood_normal CPT0265770002 CPT0265770002.WholeExome.RP-1303.bam 24103085523 BAM NA 1dc827d0-5da2-424f-be7e-b5d6b07b51b1 8f984a17a506cb3d243f1f82a504494e hg19 Blood Derived Normal C3L-03735.WXS.T C3L-03735 GBM WXS tumor CPT0264120006 CPT0264120006.WholeExome.RP-1303.bam 24321593437 BAM NA 1a452dd6-c235-40bc-91b7-9102ecf5bd95 3e792cc544f232379d0c0dfa1b57667e hg19 Primary Tumor C3L-03740.MethArray.Green.T C3L-03740 GBM Methylation Array tumor CPT0249420006 204367490043_R02C01_Grn.idat 13677880 IDAT Green 26aa6189-be18-41fd-86e1-44de3bf12f60 ff900628102ef73744153e7a8229aa6c NA Primary Tumor C3L-03740.MethArray.Red.T C3L-03740 GBM Methylation Array tumor CPT0249420006 204367490043_R02C01_Red.idat 13677880 IDAT Red 54320d84-5e1a-491e-97d5-9cae1e2f84bc 692b39d4f658cf8b968543ca5664614b NA Primary Tumor C3L-03740.miRNA-Seq.T C3L-03740 GBM miRNA-Seq tumor CPT0249420013 200513_UNC31-K00269_0278_BHH7Y7BBXY_CTAGCT_S38_L008_R1_001.unaln.bam 296311765 BAM NA 00f61c28-9d49-4409-9ba8-ad80ec422b6b d5a840abb8393cdecd2900e612d222c6 NA Primary Tumor +C3L-03740.miRNA-Seq.T.hg38 C3L-03740 GBM miRNA-Seq tumor CPT0249420013 15d9eea2-4c08-49f3-99e8-e7423a98396f_mirnaseq_gdc_realn.bam 327607910 BAM NA 1c4158b3-be2d-42ce-a13e-1df099134333 07f87bb4f531f7cb9486ed91a4f24b51 hg38 Primary Tumor C3L-03740.RNA-Seq.R1.T C3L-03740 GBM RNA-Seq tumor CPT0249420013 200218_UNC31-K00269_0266_AHGKHKBBXY_CAACAATG-CTTCACGG_S65_L008_R1_001.fastq.gz 4101708629 FASTQ NA 545a4b63-a08b-42bf-93f8-6b9faa29e42d 12cbe468f45f06aa4977560e7ccbe952 NA Primary Tumor C3L-03740.RNA-Seq.R2.T C3L-03740 GBM RNA-Seq tumor CPT0249420013 200218_UNC31-K00269_0266_AHGKHKBBXY_CAACAATG-CTTCACGG_S65_L008_R2_001.fastq.gz 4490266666 FASTQ NA 04802ae4-6a8a-400d-87e5-2822568997c5 b4f97787bfe789630d545698dc81470e NA Primary Tumor C3L-03740.WGS.N C3L-03740 GBM WGS blood_normal CPT0250420002 CPT0250420002.WholeGenome.RP-2158.bam 21405427914 BAM NA c47ab067-c1c5-42b1-9e33-e4dc928e1a81 e2373336f47dfedaa92e136ac1ba879b hg19 Blood Derived Normal +C3L-03740.WGS.N.hg38 C3L-03740 GBM WGS blood_normal CPT0250420002 6983e835-2ae6-468a-adac-ec0464461c65_wgs_gdc_realn.bam 64109908623 BAM NA 75913059-161e-4163-8bcd-7682c8b705bd 7f97cad14161a8c7e1914e45e835afe2 hg38 Blood Derived Normal C3L-03740.WGS.T C3L-03740 GBM WGS tumor CPT0249420006 CPT0249420006.WholeGenome.RP-2158.bam 29989797887 BAM NA 2143c8e9-b69d-4741-be28-b2d942baae88 b0cecb8ab9ec2beeb1f05b4c7900c477 hg19 Primary Tumor +C3L-03740.WGS.T.hg38 C3L-03740 GBM WGS tumor CPT0249420006 5f411427-6a95-49fe-be0c-950f30692337_wgs_gdc_realn.bam 87814571471 BAM NA 1408af83-c51f-4a85-9ea5-0890c2678fce ec64674539eb1c2b8d1e6d4db44ee330 hg38 Primary Tumor C3L-03740.WXS.N C3L-03740 GBM WXS blood_normal CPT0250420002 CPT0250420002.WholeExome.RP-1303.bam 22690999931 BAM NA 74cd737d-4e4e-48a0-83b1-824bb3b13135 c22310503e3fd8ad4ac7434d1682c571 hg19 Blood Derived Normal C3L-03740.WXS.T C3L-03740 GBM WXS tumor CPT0249420006 CPT0249420006.WholeExome.RP-1303.bam 19873227788 BAM NA 4fe3a81b-3274-4ef3-86a8-7957912a7c87 8be2b78d8723badbc31a3bcf0ca1f608 hg19 Primary Tumor C3L-03743.MethArray.Green.A C3L-03743 PDA Methylation Array tissue_normal CPT0264180006 203561620043_R07C01_Grn.idat 13676211 IDAT Green a0b86526-3f62-471e-af2b-34ad8bcd9f70 b2fc430ea214c861a7c243814171c1e4 NA Solid Tissue Normal @@ -12550,6 +12605,7 @@ C3L-03982.MethArray.Green.T C3L-03982 LSCC Methylation Array tumor CPT0258440007 C3L-03982.MethArray.Red.A C3L-03982 LSCC Methylation Array tissue_normal CPT0258510006 204367490093_R08C01_Red.idat 13677900 IDAT Red b7b5e27d-39a2-425d-a92b-7f72ad01208b 16ebb28a9c296503fa7e1bcfaebf283a NA Solid Tissue Normal C3L-03982.MethArray.Red.T C3L-03982 LSCC Methylation Array tumor CPT0258440007 204367470124_R04C01_Red.idat 13677880 IDAT Red e8d3c3f3-700d-4a6f-8418-4882ef1a3b3f c4463631acc35387ae49b76e0977e647 NA Primary Tumor C3L-03982.miRNA-Seq.A C3L-03982 LSCC miRNA-Seq tissue_normal CPT0258510009 200513_UNC31-K00269_0278_BHH7Y7BBXY_GATCAG_S13_L007_R1_001.unaln.bam 233471124 BAM NA f5d3fadd-adc5-4ea6-9028-3d18edb2c248 38dada1b8043727e577ce29f2bd3c363 NA Solid Tissue Normal +C3L-03982.miRNA-Seq.A.hg38 C3L-03982 LSCC miRNA-Seq tissue_normal CPT0258510009 fddc16a9-3efb-4422-9feb-eb5988f76ebc_mirnaseq_gdc_realn.bam 257426342 BAM NA e357b633-bf49-461f-9747-351db7c6a970 f5a5316820e1e2f2a1142279ee79baf8 hg38 Solid Tissue Normal C3L-03982.miRNA-Seq.T C3L-03982 LSCC miRNA-Seq tumor CPT0258440010 200224_UNC31-K00269_0267_AHC722BBXY_GATCAG_S9_L006_R1_001.unaln.bam 203350495 BAM NA ecad22b1-cd2d-4bb8-9c0c-8a3ce65094b1 c3d8f323122c7c5294c2eb746031c74d NA Primary Tumor C3L-03982.miRNA-Seq.T C3L-03982 LSCC miRNA-Seq tumor CPT0258440010 200526_UNC32-K00270_0248_BHH7WFBBXY_GATCAG_S13_L001_R1_001.unaln.bam 189193316 BAM NA 7332a096-ea3b-4d4c-8bbf-7c4a1c066b3a 24787eba626532af29bd2cbcd01fe12d NA Primary Tumor C3L-03982.RNA-Seq.R1.A C3L-03982 LSCC RNA-Seq tissue_normal CPT0258510009 200505_UNC31-K00269_0277_AHGFKNBBXY_TGCGGCGT-CCTCGGTA_S12_L003_R1_001.fastq.gz 4454069276 FASTQ NA b7c4f99d-2a4c-4653-b15d-48e37b8a0288 52f55dcd3068a4daf1289d476a4e37db NA Solid Tissue Normal @@ -12557,7 +12613,9 @@ C3L-03982.RNA-Seq.R1.T C3L-03982 LSCC RNA-Seq tumor CPT0258440010 200428_UNC32-K C3L-03982.RNA-Seq.R2.A C3L-03982 LSCC RNA-Seq tissue_normal CPT0258510009 200505_UNC31-K00269_0277_AHGFKNBBXY_TGCGGCGT-CCTCGGTA_S12_L003_R2_001.fastq.gz 5026528246 FASTQ NA 22b21306-98f0-4942-a137-1bc414a5a355 e0e45e9b46f27d11b4002c9f78d67b59 NA Solid Tissue Normal C3L-03982.RNA-Seq.R2.T C3L-03982 LSCC RNA-Seq tumor CPT0258440010 200428_UNC32-K00270_0243_AHG3Y3BBXY_TGCGGCGT-CCTCGGTA_S25_L007_R2_001.fastq.gz 4189513819 FASTQ NA 108bc5a0-64b9-4b7a-be84-884cc5f5e7fe e93cd0b5ce11ac8873e1b712f1895f20 NA Primary Tumor C3L-03982.WGS.N C3L-03982 LSCC WGS blood_normal CPT0258600002 CPT0258600002.WholeGenome.RP-2158.bam 23898985421 BAM NA 3d76dc67-8732-4f2a-ac46-fd6acead75d8 771cd5c2145082e651953445fbdb0d90 hg19 Blood Derived Normal +C3L-03982.WGS.N.hg38 C3L-03982 LSCC WGS blood_normal CPT0258600002 7f608378-bf18-46f6-8c8b-9daca5743541_wgs_gdc_realn.bam 72207406429 BAM NA a801f2d8-be1d-4543-a17c-549e5c03f77b 4afdf0020d30f0a0c178457f6e8f859a hg38 Blood Derived Normal C3L-03982.WGS.T C3L-03982 LSCC WGS tumor CPT0258440007 CPT0258440007.WholeGenome.RP-2158.bam 26240888901 BAM NA dd633f78-e6b6-4d62-ba2b-26bac8c4ee8d fbb0f51a8ec3db2c57323fc35bbc6604 hg19 Primary Tumor +C3L-03982.WGS.T.hg38 C3L-03982 LSCC WGS tumor CPT0258440007 562209b1-ac63-4e61-bb49-0162738073fb_wgs_gdc_realn.bam 75561253531 BAM NA 66ac0d8c-a8a1-46e0-86be-8f241588cd47 0e64c2ec50a8db945c2a249607023f28 hg38 Primary Tumor C3L-03982.WXS.A C3L-03982 LSCC WXS tissue_normal CPT0258510006 CPT0258510006.WholeExome.RP-1303.bam 19684837004 BAM NA dad23e8a-2ea7-4db8-b9ee-3e29ff2a7864 66faeff205973d0f510bc8c52cf22952 hg19 Solid Tissue Normal C3L-03982.WXS.N C3L-03982 LSCC WXS blood_normal CPT0258600002 CPT0258600002.WholeExome.RP-1303.bam 24777374607 BAM NA 921d8c19-e502-45eb-b8d4-8da65ebc9b99 d3cc8100c836cf3187427268b01952a4 hg19 Blood Derived Normal C3L-03982.WXS.T C3L-03982 LSCC WXS tumor CPT0258440007 CPT0258440007.WholeExome.RP-1303.bam 21400925085 BAM NA d457d04b-43fb-4c8a-9e15-008b8fb38861 557c1ff45aae936bbc541ded450f57d6 hg19 Primary Tumor @@ -12622,13 +12680,17 @@ C3L-03987.MethArray.Green.T C3L-03987 LSCC Methylation Array tumor CPT0252540006 C3L-03987.MethArray.Red.A C3L-03987 LSCC Methylation Array tissue_normal CPT0252590009 204367490061_R07C01_Red.idat 13677885 IDAT Red e4bd94ef-e5b3-4b06-bdf3-7a2216b62e30 ee54fc3f9a82989baa723426f73fcd10 NA Solid Tissue Normal C3L-03987.MethArray.Red.T C3L-03987 LSCC Methylation Array tumor CPT0252540006 204372030164_R05C01_Red.idat 13677880 IDAT Red 40be6bc5-91cc-4942-9478-9ce06a638148 a61e127ba8f0482568fd74bab6afb757 NA Primary Tumor C3L-03987.miRNA-Seq.A C3L-03987 LSCC miRNA-Seq tissue_normal CPT0252590006 200513_UNC31-K00269_0278_BHH7Y7BBXY_CTATAC_S39_L006_R1_001.unaln.bam 287186555 BAM NA 306b11f0-b495-43db-9ebf-74ded40adab6 c6f1e0f4005eaa8b3cc40aab513a7275 NA Solid Tissue Normal +C3L-03987.miRNA-Seq.A.hg38 C3L-03987 LSCC miRNA-Seq tissue_normal CPT0252590006 78a3b6e2-1284-4a64-b2a5-69d907a6a5db_mirnaseq_gdc_realn.bam 325626703 BAM NA 557b919c-13f5-4d9f-980a-2ae3e7158bb4 324a781b94f79b6c4ec5775ddc72396c hg38 Solid Tissue Normal C3L-03987.miRNA-Seq.T C3L-03987 LSCC miRNA-Seq tumor CPT0252540013 200325_UNC31-K00269_0272_AHHC2NBBXY_CTATAC_S15_L001_R1_001.unaln.bam 261348339 BAM NA 2d37ae53-7b41-4f05-9d1c-74b2992d79f2 149325268fcd4e61c57c619f6f247e85 NA Primary Tumor +C3L-03987.miRNA-Seq.T.hg38 C3L-03987 LSCC miRNA-Seq tumor CPT0252540013 e44c8fb3-1eca-4b5a-9289-1cdc6e2d8650_mirnaseq_gdc_realn.bam 281426554 BAM NA f74cd8f8-afff-44db-93d9-c85841d4738b 39d13b6ef5aec9e6c4d906d9d47b9025 hg38 Primary Tumor C3L-03987.RNA-Seq.R1.A C3L-03987 LSCC RNA-Seq tissue_normal CPT0252590006 200505_UNC32-K00270_0246_BHH5F5BBXY_TAAGTGGT-CTTAAGCC_S23_L006_R1_001.fastq.gz 3917487475 FASTQ NA 8a661ca8-7570-4cba-a726-78205f60aa1b 8be71db0297d31751134612fb6ab7291 NA Solid Tissue Normal C3L-03987.RNA-Seq.R1.T C3L-03987 LSCC RNA-Seq tumor CPT0252540013 200428_UNC31-K00269_0275_AHGCJVBBXY_CTCACCAA-CTAGGCAA_S23_L006_R1_001.fastq.gz 3904992759 FASTQ NA f67c42b8-3e96-439f-9be0-26efce378646 c268ff318fe8a57ef210444c2048eaf9 NA Primary Tumor C3L-03987.RNA-Seq.R2.A C3L-03987 LSCC RNA-Seq tissue_normal CPT0252590006 200505_UNC32-K00270_0246_BHH5F5BBXY_TAAGTGGT-CTTAAGCC_S23_L006_R2_001.fastq.gz 4781947706 FASTQ NA aff407f2-bcab-4cb6-8336-5444bff8bb06 7386a790b34f08bbb10fd1d3997f06ae NA Solid Tissue Normal C3L-03987.RNA-Seq.R2.T C3L-03987 LSCC RNA-Seq tumor CPT0252540013 200428_UNC31-K00269_0275_AHGCJVBBXY_CTCACCAA-CTAGGCAA_S23_L006_R2_001.fastq.gz 4106265099 FASTQ NA d6acd99d-46a3-4459-a08f-e4a4b11ee4d0 e05c3424e742a083f09bd1c653a8fe48 NA Primary Tumor C3L-03987.WGS.N C3L-03987 LSCC WGS blood_normal CPT0252700002 CPT0252700002.WholeGenome.RP-2158.bam 21229115177 BAM NA 8e8419d5-650d-4b80-b9c6-a5549c322550 e8355a371bdf55693037a6512a5ecc5c hg19 Blood Derived Normal +C3L-03987.WGS.N.hg38 C3L-03987 LSCC WGS blood_normal CPT0252700002 00f9704c-e6ea-446b-ac12-1f310e969a2b_wgs_gdc_realn.bam 63542945824 BAM NA c88a46c1-fe32-430b-a123-5a297afef1c0 ef6eacc58aee6248b87f67a02bdb3157 hg38 Blood Derived Normal C3L-03987.WGS.T C3L-03987 LSCC WGS tumor CPT0252540006 CPT0252540006.WholeGenome.RP-2158.bam 25941364632 BAM NA f03ce40b-71d0-41c3-ae24-6a6eb64b34fb 1b38c1e8238ef8dc328a2ca5205ada37 hg19 Primary Tumor +C3L-03987.WGS.T.hg38 C3L-03987 LSCC WGS tumor CPT0252540006 a70d0e10-82c3-4cf3-b3a3-fc3fed293587_wgs_gdc_realn.bam 78541080120 BAM NA 832d5ddd-2ebc-4840-92a7-c0f25855ec1e ea7e7c2cdc6378584e78f9d11765a86a hg38 Primary Tumor C3L-03987.WXS.A C3L-03987 LSCC WXS tissue_normal CPT0252590009 CPT0252590009.WholeExome.RP-1303.bam 20783240479 BAM NA e2f11f45-98c9-4f38-a4fd-5effee03ad44 baba171f396a099d5b92d533ea4929be hg19 Solid Tissue Normal C3L-03987.WXS.N C3L-03987 LSCC WXS blood_normal CPT0252700002 CPT0252700002.WholeExome.RP-1303.bam 20722361996 BAM NA 9b2e232d-424d-4114-a94e-d9778a7895cd faca83ab6789a715a48f5771390b699f hg19 Blood Derived Normal C3L-03987.WXS.T C3L-03987 LSCC WXS tumor CPT0252540006 CPT0252540006.WholeExome.RP-1303.bam 32209599109 BAM NA b9048b2b-a34f-4e83-b0a7-f74440cabc52 2b53e7803b3a1f255fcb32eb69daeebf hg19 Primary Tumor @@ -12804,10 +12866,13 @@ C3L-04033.WXS.T.hg38 C3L-04033 LUAD WXS tumor CPT0231350007 00faa3b4-b35a-4c70-9 C3L-04036.MethArray.Green.T C3L-04036 GBM Methylation Array tumor CPT0228100006 204367490056_R02C01_Grn.idat 13677895 IDAT Green adb639af-6803-4a7a-961f-ac41a342bbc2 573de43df98665329303a89633da0cc8 NA Primary Tumor C3L-04036.MethArray.Red.T C3L-04036 GBM Methylation Array tumor CPT0228100006 204367490056_R02C01_Red.idat 13677895 IDAT Red fc1c77e5-7703-4100-b663-c11561492241 351825c81bee656f396fffdceb28ceed NA Primary Tumor C3L-04036.miRNA-Seq.T C3L-04036 GBM miRNA-Seq tumor CPT0228100013 200403_UNC31-K00269_0274_AHCF7GBBXY_TCGAAG_S23_L001_R1_001.unaln.bam 231628336 BAM NA 0cb1fa8c-049f-4fb9-a6b0-14caf66a4c89 7b4c3cf3366bb40a18a2c73e28377009 NA Primary Tumor +C3L-04036.miRNA-Seq.T.hg38 C3L-04036 GBM miRNA-Seq tumor CPT0228100013 4a878582-42a5-4ea9-aa7f-92e81a823fb5_mirnaseq_gdc_realn.bam 261066376 BAM NA 9fe7adc5-5c84-4e2a-b9c8-c71e924a05d5 ec212574e36605b4c363dbc0c4273913 hg38 Primary Tumor C3L-04036.RNA-Seq.R1.T C3L-04036 GBM RNA-Seq tumor CPT0228100013 200212_UNC31-K00269_0265_BHGCWGBBXY_GTTCCAAT-AATTCTGC_S18_L005_R1_001.fastq.gz 4300016107 FASTQ NA 4ad5e390-ef2e-4370-a0fa-de8d0c112f8b 2e4c2075b60020d26b10507eaa4e17f4 NA Primary Tumor C3L-04036.RNA-Seq.R2.T C3L-04036 GBM RNA-Seq tumor CPT0228100013 200212_UNC31-K00269_0265_BHGCWGBBXY_GTTCCAAT-AATTCTGC_S18_L005_R2_001.fastq.gz 4686361595 FASTQ NA 180a4380-addf-4a1a-98bd-e75a7b5982da bfe895f8895e2dda867559468bd276a4 NA Primary Tumor C3L-04036.WGS.N C3L-04036 GBM WGS blood_normal CPT0228200002 CPT0228200002.WholeGenome.RP-2158.bam 27954573868 BAM NA 4614d7be-dcff-4e9a-b51a-2a14ca2a0707 43d0a8587a3e8c3f8f943083729c2304 hg19 Blood Derived Normal +C3L-04036.WGS.N.hg38 C3L-04036 GBM WGS blood_normal CPT0228200002 d5e843de-676d-4f6b-ae84-2dc2e7a6d2f6_wgs_gdc_realn.bam 84600612482 BAM NA 5cc05bff-59ba-46d5-a94b-f2ce494057d0 c7043a90936f5152ce75c5999e5eed82 hg38 Blood Derived Normal C3L-04036.WGS.T C3L-04036 GBM WGS tumor CPT0228100006 CPT0228100006.WholeGenome.RP-2158.bam 26788664741 BAM NA ea0a6535-4d05-4a3f-b835-1431971ebd4d d3e14718e545057ae4380f06ccb1d4da hg19 Primary Tumor +C3L-04036.WGS.T.hg38 C3L-04036 GBM WGS tumor CPT0228100006 cf7c8668-776a-401c-8507-aeb41e890b44_wgs_gdc_realn.bam 78770530553 BAM NA 38dbe442-1dc6-4904-a03f-2d4d7fd6a845 4d2d3cb33789d093c427cda3cfa84cd7 hg38 Primary Tumor C3L-04036.WXS.N C3L-04036 GBM WXS blood_normal CPT0228200002 CPT0228200002.WholeExome.RP-1303.bam 24314988168 BAM NA ceb21f60-93ac-4f7e-a303-770b73fbc591 2b4cebe63a93f43713f10792ae618c8b hg19 Blood Derived Normal C3L-04036.WXS.T C3L-04036 GBM WXS tumor CPT0228100006 CPT0228100006.WholeExome.RP-1303.bam 22411527930 BAM NA e451386b-5d46-4f36-ab71-9e929e867659 77b0a1392dcb36bbda35c4a2c5ccd078 hg19 Primary Tumor C3L-04037.MethArray.Green.T C3L-04037 LUAD Methylation Array tumor CPT0229540007 203561450114_R03C01_Grn.idat 13676226 IDAT Green dadbd758-9fb5-4aca-84cb-9d77c673053e 4531b3eabcdb9649de1b4556e155a247 NA Primary Tumor @@ -12837,10 +12902,13 @@ C3L-04037.WXS.T.hg38 C3L-04037 LUAD WXS tumor CPT0229540007 2ed956a8-b3a3-41e2-a C3L-04038.MethArray.Green.T C3L-04038 GBM Methylation Array tumor CPT0256720007 204372030090_R02C01_Grn.idat 13677880 IDAT Green bf66a9f9-c721-4bb6-aa0c-21ca6574b2ef 87197b28d1920d0d095eec3820cd80b8 NA Primary Tumor C3L-04038.MethArray.Red.T C3L-04038 GBM Methylation Array tumor CPT0256720007 204372030090_R02C01_Red.idat 13677880 IDAT Red 73a53eb1-7efb-4085-8b36-f1d074197b16 698ce1b148b413adac778782648860b5 NA Primary Tumor C3L-04038.miRNA-Seq.T C3L-04038 GBM miRNA-Seq tumor CPT0256720010 200403_UNC31-K00269_0274_AHCF7GBBXY_CTTGTA_S36_L002_R1_001.unaln.bam 178241410 BAM NA c3536cfa-1998-4132-ba94-0f410cc2ca04 026e29295b9954392fbf04bd8deb4fa0 NA Primary Tumor +C3L-04038.miRNA-Seq.T.hg38 C3L-04038 GBM miRNA-Seq tumor CPT0256720010 7dd51466-f17c-4da6-afd8-5bfb2986eccc_mirnaseq_gdc_realn.bam 198964432 BAM NA 2eb20cbb-3808-4d16-83bb-f7e01ca86189 3daa578b646dcf0e99a2486578370ec8 hg38 Primary Tumor C3L-04038.RNA-Seq.R1.T C3L-04038 GBM RNA-Seq tumor CPT0256720010 200204_UNC31-K00269_0263_AHG2CJBBXY_CTCTCGTC-TATAACCT_S4_L001_R1_001.fastq.gz 3057017289 FASTQ NA 4b1047c2-0ebd-425a-bbb5-558034d20ee0 bb8a984b5978f1dfd65d46ddd4302b12 NA Primary Tumor C3L-04038.RNA-Seq.R2.T C3L-04038 GBM RNA-Seq tumor CPT0256720010 200204_UNC31-K00269_0263_AHG2CJBBXY_CTCTCGTC-TATAACCT_S4_L001_R2_001.fastq.gz 3685939739 FASTQ NA 432fbf58-dc9c-45c4-aad4-ccb291b8c512 bae98b409546c90f3f354cab2a324e21 NA Primary Tumor C3L-04038.WGS.N C3L-04038 GBM WGS blood_normal CPT0256820002 CPT0256820002.WholeGenome.RP-2158.bam 25899155371 BAM NA e05914be-d79b-4d2a-943d-e2ffa3f8f761 f768b769ad4bcea9b24a17d14078c8c6 hg19 Blood Derived Normal +C3L-04038.WGS.N.hg38 C3L-04038 GBM WGS blood_normal CPT0256820002 e5fa0684-79a6-4278-a7cf-29880b9ce537_wgs_gdc_realn.bam 78286150186 BAM NA 21d14944-67f4-4d0c-bfd5-ab7986f4c4c5 8dcc84c678d031574684437ad13a9c1e hg38 Blood Derived Normal C3L-04038.WGS.T C3L-04038 GBM WGS tumor CPT0256720007 CPT0256720007.WholeGenome.RP-2158.bam 28044770829 BAM NA 80ca3087-4bf6-4b8c-8f8e-58e43b23a65a c74534c6baced44d6f40d2e258cea9e6 hg19 Primary Tumor +C3L-04038.WGS.T.hg38 C3L-04038 GBM WGS tumor CPT0256720007 17f5bea2-6f70-4e8a-8c59-da28bbe1ff3f_wgs_gdc_realn.bam 82873631851 BAM NA 9b5bfea2-570b-4285-85db-df3e57f7fbf6 888b3df7fd07829ee56d851c29b9f05c hg38 Primary Tumor C3L-04038.WXS.N C3L-04038 GBM WXS blood_normal CPT0256820002 CPT0256820002.WholeExome.RP-1303.bam 26276419705 BAM NA d431b988-27da-45a1-b85a-7e412e19f42a c9f091e04d95486749a2fa5812bbacf3 hg19 Blood Derived Normal C3L-04038.WXS.T C3L-04038 GBM WXS tumor CPT0256720007 CPT0256720007.WholeExome.RP-1303.bam 20717451239 BAM NA 249c70cd-cfd6-49b5-9c77-33b54ab3004e ac80d75dac283821d7c82361048f8f13 hg19 Primary Tumor C3L-04040.MethArray.Green.T C3L-04040 LUAD Methylation Array tumor CPT0232060007 203561450099_R04C01_Grn.idat 13676216 IDAT Green 8548dfe6-86b6-4a60-b533-25a67c025fc0 5a3f5fb1f78bdc2d849ad6ba26420a79 NA Primary Tumor @@ -12918,13 +12986,17 @@ C3L-04079.MethArray.Green.T C3L-04079 LSCC Methylation Array tumor CPT0304120006 C3L-04079.MethArray.Red.A C3L-04079 LSCC Methylation Array tissue_normal CPT0304140006 204372030015_R06C01_Red.idat 13677905 IDAT Red 769478ae-2592-46fe-80b8-07935a1d1325 729b3189673258d9131f04414003b2ed NA Solid Tissue Normal C3L-04079.MethArray.Red.T C3L-04079 LSCC Methylation Array tumor CPT0304120006 204367470132_R05C01_Red.idat 13677880 IDAT Red fb794db9-86bb-4b04-aa5e-88c9779e5cdc dc1828cc34dd91217a25af0fca77d692 NA Primary Tumor C3L-04079.miRNA-Seq.A C3L-04079 LSCC miRNA-Seq tissue_normal CPT0304140009 200325_UNC31-K00269_0272_AHHC2NBBXY_TCGGCA_S24_L001_R1_001.unaln.bam 255806807 BAM NA fbf64f36-d546-4ab4-a32e-29a7c7d0daa7 1bb4bddb600e38b05e1a2f80dd04ebb8 NA Solid Tissue Normal +C3L-04079.miRNA-Seq.A.hg38 C3L-04079 LSCC miRNA-Seq tissue_normal CPT0304140009 c61c2663-c4a6-4f22-9a3e-8c88cdd6fef4_mirnaseq_gdc_realn.bam 289223267 BAM NA 1f096955-4765-4ed7-8b70-aac094bce777 7afbf7fb320b9752d9ae48bf3211c3da hg38 Solid Tissue Normal C3L-04079.miRNA-Seq.T C3L-04079 LSCC miRNA-Seq tumor CPT0304120009 200224_UNC31-K00269_0267_AHC722BBXY_GATCAG_S9_L008_R1_001.unaln.bam 206680936 BAM NA 3b77d0cd-51c2-4f06-97d2-4ce4492633d7 47e81999372a81cccc4d764d2dee43f7 NA Primary Tumor +C3L-04079.miRNA-Seq.T.hg38 C3L-04079 LSCC miRNA-Seq tumor CPT0304120009 5aae3bcc-53d6-42c6-b76a-413f4e8f8942_mirnaseq_gdc_realn.bam 229476333 BAM NA f53d5b80-32d6-4c25-801d-789b9f117d4e b384c9dbc66b216cd2e1bbcd65a59922 hg38 Primary Tumor C3L-04079.RNA-Seq.R1.A C3L-04079 LSCC RNA-Seq tissue_normal CPT0304140009 200428_UNC31-K00269_0275_AHGCJVBBXY_CTAGCGCT-GTGTAGAC_S32_L008_R1_001.fastq.gz 4129549202 FASTQ NA 6889624b-4f29-4f47-a3b2-2614c9f55cb9 a630d74eaea2c4f2ec566adc2cbf1ef8 NA Solid Tissue Normal C3L-04079.RNA-Seq.R1.T C3L-04079 LSCC RNA-Seq tumor CPT0304120009 200505_UNC32-K00270_0245_AHH5FVBBXY_AGTTCAGG-CCAACAGA_S9_L003_R1_001.fastq.gz 3690093354 FASTQ NA 2815a18f-e1ba-45de-a67e-2ac1988ec582 cead2c5c835ab34e38da6f24e600dc49 NA Primary Tumor C3L-04079.RNA-Seq.R2.A C3L-04079 LSCC RNA-Seq tissue_normal CPT0304140009 200428_UNC31-K00269_0275_AHGCJVBBXY_CTAGCGCT-GTGTAGAC_S32_L008_R2_001.fastq.gz 4228325182 FASTQ NA c4d4d9f5-28a6-43fc-a0dd-8a5012893224 6873503e3b668d4a98454c6e6c8c093c NA Solid Tissue Normal C3L-04079.RNA-Seq.R2.T C3L-04079 LSCC RNA-Seq tumor CPT0304120009 200505_UNC32-K00270_0245_AHH5FVBBXY_AGTTCAGG-CCAACAGA_S9_L003_R2_001.fastq.gz 3997440822 FASTQ NA 10844c0d-45f2-4b34-a035-a4f108e93efc 656cd059003417fe8b652915cb6a6e2c NA Primary Tumor C3L-04079.WGS.N C3L-04079 LSCC WGS blood_normal CPT0305040002 CPT0305040002.WholeGenome.RP-2158.bam 24347450858 BAM NA 41fef29f-db09-4983-8548-722fe4ad9e45 b80372ff61768513d6df6e942f84049c hg19 Blood Derived Normal +C3L-04079.WGS.N.hg38 C3L-04079 LSCC WGS blood_normal CPT0305040002 9bea6b89-38ce-45c1-8fb2-9c0be6be4cd2_wgs_gdc_realn.bam 70378739186 BAM NA 6a3d4196-15a5-48bd-bf17-52f093143682 6847eea5773a3833525b654fceac1a69 hg38 Blood Derived Normal C3L-04079.WGS.T C3L-04079 LSCC WGS tumor CPT0304120006 CPT0304120006.WholeGenome.RP-2158.bam 23699922433 BAM NA fef741d5-c6e6-467a-99cc-af68ae9bb561 85f444beb6878506c1f372203d3f5da5 hg19 Primary Tumor +C3L-04079.WGS.T.hg38 C3L-04079 LSCC WGS tumor CPT0304120006 1acb4845-2e95-438b-95ad-2598b8dce7e7_wgs_gdc_realn.bam 71588721822 BAM NA 40e8d818-d2c1-4bf9-a55b-0835e0ed02db a751272a39687a625744500f8c05c3ee hg38 Primary Tumor C3L-04079.WXS.A C3L-04079 LSCC WXS tissue_normal CPT0304140006 CPT0304140006.WholeExome.RP-1303.bam 19991935832 BAM NA 5010dd15-dafb-4d9a-a528-69fedff1d4be b7ed03da077163a2db023fee06fc00df hg19 Solid Tissue Normal C3L-04079.WXS.N C3L-04079 LSCC WXS blood_normal CPT0305040002 CPT0305040002.WholeExome.RP-1303.bam 26883502029 BAM NA 13518d81-cf78-4be4-af7f-74fffab3ad67 9fd910576e4f17e3ee2a917804ae7c31 hg19 Blood Derived Normal C3L-04079.WXS.T C3L-04079 LSCC WXS tumor CPT0304120006 CPT0304120006.WholeExome.RP-1303.bam 21501451261 BAM NA 90412e42-0440-4770-a15f-f3872d64cc99 65c1607b8f367d3cb1f7376bf0ec723f hg19 Primary Tumor @@ -12960,19 +13032,25 @@ C3L-04080.WXS.T.high_cov C3L-04080 PDA WXS tumor CPT0221470008 CPT0221470008.Who C3L-04082.MethArray.Green.T C3L-04082 GBM Methylation Array tumor CPT0265570007 204372030014_R01C01_Grn.idat 13677895 IDAT Green c0349bd7-c6ee-4508-8cac-daf50e543949 0de21f3b99742909b3ca43265dca3efe NA Primary Tumor C3L-04082.MethArray.Red.T C3L-04082 GBM Methylation Array tumor CPT0265570007 204372030014_R01C01_Red.idat 13677895 IDAT Red 7ce1f779-23e3-4319-b2a5-1c7a1a73ecd7 a2c952542f194e3b0fd50292e0dd14b4 NA Primary Tumor C3L-04082.miRNA-Seq.T C3L-04082 GBM miRNA-Seq tumor CPT0265570010 200403_UNC31-K00269_0274_AHCF7GBBXY_TGACCA_S28_L002_R1_001.unaln.bam 233816272 BAM NA 4f037c4a-b4be-4662-ad7b-952b81324e1a 93ed3305db8a814daad8117ffc70074b NA Primary Tumor +C3L-04082.miRNA-Seq.T.hg38 C3L-04082 GBM miRNA-Seq tumor CPT0265570010 015db4d7-81d1-47e6-b5ab-da7771bbbb55_mirnaseq_gdc_realn.bam 259069258 BAM NA f3af9903-c085-4e9e-b733-10b15ef81da3 2f9a7e3cd5fec7f69db441e8e590a14e hg38 Primary Tumor C3L-04082.RNA-Seq.R1.T C3L-04082 GBM RNA-Seq tumor CPT0265570010 200129_UNC31-K00269_0261_AHG2CLBBXY_AAGTCCAA-TATGAGTA_S8_L007_R1_001.fastq.gz 4248024679 FASTQ NA ec4c1755-cc9a-44e5-a27e-f2dfb20759aa 605ddfaf30860a2600b04703541a49ab NA Primary Tumor C3L-04082.RNA-Seq.R2.T C3L-04082 GBM RNA-Seq tumor CPT0265570010 200129_UNC31-K00269_0261_AHG2CLBBXY_AAGTCCAA-TATGAGTA_S8_L007_R2_001.fastq.gz 4598010602 FASTQ NA 5f246b0c-555f-40f6-8164-cb5299028ec0 e98b9ec3f4d86e85e2ade54f3dd4bb39 NA Primary Tumor C3L-04082.WGS.N C3L-04082 GBM WGS blood_normal CPT0264080002 CPT0264080002.WholeGenome.RP-2158.bam 23128977215 BAM NA 1f9d4fab-3a95-41ba-8cb8-70de60482272 2d7532abc3f9ac71521f5f2dad90b3bd hg19 Blood Derived Normal +C3L-04082.WGS.N.hg38 C3L-04082 GBM WGS blood_normal CPT0264080002 bb8cccdb-ed81-4577-985c-bb7a2fa25615_wgs_gdc_realn.bam 67786654929 BAM NA 59832d48-68b8-4628-8d69-7508a94d58a8 79168dccb6f2af24bc16916028e034d9 hg38 Blood Derived Normal C3L-04082.WGS.T C3L-04082 GBM WGS tumor CPT0265570007 CPT0265570007.WholeGenome.RP-2158.bam 30408005969 BAM NA 1a83e225-07c0-4a15-a08f-b287f7e00006 2b81437e81e5be3192e476f67c9c4333 hg19 Primary Tumor +C3L-04082.WGS.T.hg38 C3L-04082 GBM WGS tumor CPT0265570007 55106539-3a36-4192-9e5c-0e548beee398_wgs_gdc_realn.bam 88159863449 BAM NA 80a90602-d5bb-4aa3-bcbf-2911f481b8f3 c0769e69ca889708537eb90cecbe40c2 hg38 Primary Tumor C3L-04082.WXS.N C3L-04082 GBM WXS blood_normal CPT0264080002 CPT0264080002.WholeExome.RP-1303.bam 24080895568 BAM NA 3da9c6d0-81b1-4747-ab34-b6204f43eea0 0d32d45408d0d227f0b3541c0aaf428c hg19 Blood Derived Normal C3L-04082.WXS.T C3L-04082 GBM WXS tumor CPT0265570007 CPT0265570007.WholeExome.RP-1303.bam 18573057471 BAM NA defd4a05-6b63-4c8e-9b64-de81577bc0f0 2fd311a796471a1d1bff2061e41b8d19 hg19 Primary Tumor C3L-04083.MethArray.Green.T C3L-04083 GBM Methylation Array tumor CPT0242430007 204372030024_R08C01_Grn.idat 13677905 IDAT Green aefb1fd3-b012-4af5-a174-0084762eb9f2 7a8b9c06df63235b354e6861b1db3152 NA Primary Tumor C3L-04083.MethArray.Red.T C3L-04083 GBM Methylation Array tumor CPT0242430007 204372030024_R08C01_Red.idat 13677905 IDAT Red 990a1e0b-bb2d-41e6-b1c2-aa8c00460311 c8593d64049387a57f6528d91afe6827 NA Primary Tumor C3L-04083.miRNA-Seq.T C3L-04083 GBM miRNA-Seq tumor CPT0242430010 200403_UNC31-K00269_0274_AHCF7GBBXY_AGTTCC_S38_L002_R1_001.unaln.bam 227407220 BAM NA 2a9500a6-03a6-4a52-bbc2-dcfe47abd5ea 4bf226a8a178ef2f1476cf8354420b1a NA Primary Tumor +C3L-04083.miRNA-Seq.T.hg38 C3L-04083 GBM miRNA-Seq tumor CPT0242430010 da4f8b93-3997-4daa-8342-c2165079fd1d_mirnaseq_gdc_realn.bam 262845496 BAM NA 3160a1e1-b57a-4f65-b463-91727f0bc175 290423ff6be7e16227db692c7d2fdb46 hg38 Primary Tumor C3L-04083.RNA-Seq.R1.T C3L-04083 GBM RNA-Seq tumor CPT0242430010 200204_UNC31-K00269_0263_AHG2CJBBXY_TTGGACTC-GGAAGCAG_S6_L002_R1_001.fastq.gz 3611394680 FASTQ NA 5549791b-5875-433f-a85e-980a44bb3310 d2169d9407798432f166af4ed8904f9e NA Primary Tumor C3L-04083.RNA-Seq.R2.T C3L-04083 GBM RNA-Seq tumor CPT0242430010 200204_UNC31-K00269_0263_AHG2CJBBXY_TTGGACTC-GGAAGCAG_S6_L002_R2_001.fastq.gz 4227666815 FASTQ NA 21ee205d-ff01-4791-82f7-e4b0f801a099 1d928d05498a22dacbb9eeeb2cdd13e1 NA Primary Tumor C3L-04083.WGS.N C3L-04083 GBM WGS blood_normal CPT0243420002 CPT0243420002.WholeGenome.RP-2158.bam 25713668352 BAM NA a9c2a88b-947b-4b4e-94b1-6b877ae9b7c6 3429b00db2bbed7bdfaaa7e8f1d236a0 hg19 Blood Derived Normal +C3L-04083.WGS.N.hg38 C3L-04083 GBM WGS blood_normal CPT0243420002 d0ebe943-1e7a-4ad0-9273-5227f54f1cc6_wgs_gdc_realn.bam 76815969296 BAM NA 8f0a473f-e05f-4b30-988f-a4456e458e19 816c80c4fcb03e117f17ba7fb395110d hg38 Blood Derived Normal C3L-04083.WGS.T C3L-04083 GBM WGS tumor CPT0242430007 CPT0242430007.WholeGenome.RP-2158.bam 24095585977 BAM NA 058118a9-ec62-4f35-9758-e4701373868f c757a848bb3e2b6aa19a896e5ed11456 hg19 Primary Tumor +C3L-04083.WGS.T.hg38 C3L-04083 GBM WGS tumor CPT0242430007 c66bf4aa-16ce-43f4-a353-8244577bf31a_wgs_gdc_realn.bam 71762265713 BAM NA a76bbc4e-73d6-452c-8993-b8b3c830587b 1728f954055f5e7fdb0ae207e65bad6f hg38 Primary Tumor C3L-04083.WXS.N C3L-04083 GBM WXS blood_normal CPT0243420002 CPT0243420002.WholeExome.RP-1303.bam 21584884315 BAM NA 1bf5e1d1-526e-4246-868c-4999e8ed252f a7d1119d54a0eff705d7b935ec25b258 hg19 Blood Derived Normal C3L-04083.WXS.T C3L-04083 GBM WXS tumor CPT0242430007 CPT0242430007.WholeExome.RP-1303.bam 19954045723 BAM NA c90b0f71-da42-434e-a69f-a96bfd274fdf aefbbdf3edfc997955e1b2188fd72a5a hg19 Primary Tumor C3L-04084.MethArray.Green.T C3L-04084 GBM Methylation Array tumor CPT0217100006 203219670147_R08C01_Grn.idat 13676236 IDAT Green fe040214-39c3-434a-85e5-db58d56ddcfd 28f4757d058e3e36f048149d4ac17ac6 NA Primary Tumor @@ -12995,19 +13073,25 @@ C3L-04084.WXS.T.hg38 C3L-04084 GBM WXS tumor CPT0217100006 a47119eb-35fd-4fd3-92 C3L-04090.MethArray.Green.T C3L-04090 GBM Methylation Array tumor CPT0265630007 204367400087_R03C01_Grn.idat 13677880 IDAT Green 2932c1e2-8908-4191-a617-94849275268c 467ed866460d854441fab8f05910ce57 NA Primary Tumor C3L-04090.MethArray.Red.T C3L-04090 GBM Methylation Array tumor CPT0265630007 204367400087_R03C01_Red.idat 13677880 IDAT Red 0d4bc648-2c5f-4a71-82ce-ae5448ed8ad4 eaa9a674df9a09f9016a41d052f87224 NA Primary Tumor C3L-04090.miRNA-Seq.T C3L-04090 GBM miRNA-Seq tumor CPT0265630010 200403_UNC31-K00269_0274_AHCF7GBBXY_ACAGTG_S29_L002_R1_001.unaln.bam 229790346 BAM NA dd773231-83d5-4d0e-afd5-6827c0ab45cb db36cb210fbd2f57987234081afbf20a NA Primary Tumor +C3L-04090.miRNA-Seq.T.hg38 C3L-04090 GBM miRNA-Seq tumor CPT0265630010 81f20c51-e19d-4cb4-a74d-59c4aff9a5c9_mirnaseq_gdc_realn.bam 259059313 BAM NA 4f77b53c-7b32-42b1-9ff3-eac29474ec55 3e27b38ed0164f9828a18096078178e1 hg38 Primary Tumor C3L-04090.RNA-Seq.R1.T C3L-04090 GBM RNA-Seq tumor CPT0265630010 200129_UNC31-K00269_0261_AHG2CLBBXY_ATCCACTG-AGGTGCGT_S9_L008_R1_001.fastq.gz 4945213572 FASTQ NA 9a8aec46-4acd-4c73-96c3-ab521a638114 a679c5c2f2ae92dd0b120c3a216ee245 NA Primary Tumor C3L-04090.RNA-Seq.R2.T C3L-04090 GBM RNA-Seq tumor CPT0265630010 200129_UNC31-K00269_0261_AHG2CLBBXY_ATCCACTG-AGGTGCGT_S9_L008_R2_001.fastq.gz 5597226556 FASTQ NA c3e5d01b-6efa-4a68-9f27-d3d6955b01e5 6be22923c70e6dc8ca956f3c7cfef44f NA Primary Tumor C3L-04090.WGS.N C3L-04090 GBM WGS blood_normal CPT0264100002 CPT0264100002.WholeGenome.RP-2158.bam 28096864252 BAM NA 38c663ab-d41b-4605-80f4-21334e899a9f 0ede58443a662208c3128f3d3fa44a25 hg19 Blood Derived Normal +C3L-04090.WGS.N.hg38 C3L-04090 GBM WGS blood_normal CPT0264100002 cd982953-0066-4729-91e5-ccf5800c6287_wgs_gdc_realn.bam 83572926292 BAM NA b005d5ce-da55-4484-b85f-33250d2f2f93 9155a20fa7b7f69e4a5cb35558e35e29 hg38 Blood Derived Normal C3L-04090.WGS.T C3L-04090 GBM WGS tumor CPT0265630007 CPT0265630007.WholeGenome.RP-2158.bam 31570550494 BAM NA 281321cf-ff95-40ef-973a-1cdd931c914e b9d1b2442da75249ab30e8c1d21ade6e hg19 Primary Tumor +C3L-04090.WGS.T.hg38 C3L-04090 GBM WGS tumor CPT0265630007 0dc0882f-2967-4268-afaa-eff7fa83e921_wgs_gdc_realn.bam 92533479255 BAM NA c3ab0336-b7dc-4739-a99c-faf95f70764c abf299e827493c16910e60a9155625cf hg38 Primary Tumor C3L-04090.WXS.N C3L-04090 GBM WXS blood_normal CPT0264100002 CPT0264100002.WholeExome.RP-1303.bam 24947982395 BAM NA f5750679-d8a2-4b5e-be9e-6663efc7225c f20065edb8cbf1f2003cbcebfb9afc98 hg19 Blood Derived Normal C3L-04090.WXS.T C3L-04090 GBM WXS tumor CPT0265630007 CPT0265630007.WholeExome.RP-1303.bam 20161190594 BAM NA 494ab4e9-c16b-4840-8abd-fd9e5e21cb99 56a9ee4207a1da6678ca47f27a7ba31d hg19 Primary Tumor C3L-04213.MethArray.Green.T C3L-04213 GBM Methylation Array tumor CPT0277180006 204367490030_R03C01_Grn.idat 13677885 IDAT Green 99a416e8-f01b-4505-9f64-75fdd5c86d5b 8d552955eeb20ee0366d8e04097d7738 NA Primary Tumor C3L-04213.MethArray.Red.T C3L-04213 GBM Methylation Array tumor CPT0277180006 204367490030_R03C01_Red.idat 13677885 IDAT Red 61764414-eaf2-4995-aab3-6177e0ce485e 94c47d82a307a15054c123e533217b76 NA Primary Tumor C3L-04213.miRNA-Seq.T C3L-04213 GBM miRNA-Seq tumor CPT0277180009 200403_UNC31-K00269_0274_AHCF7GBBXY_CACGAT_S7_L001_R1_001.unaln.bam 247132876 BAM NA 4a732346-4aee-42d0-80e9-32fe22a79b68 0110a279fa78eaf70cae0563b4113dcb NA Primary Tumor +C3L-04213.miRNA-Seq.T.hg38 C3L-04213 GBM miRNA-Seq tumor CPT0277180009 5bdfbd50-8f9c-4421-afae-ad61bea3cbf7_mirnaseq_gdc_realn.bam 273383199 BAM NA 5a233130-f032-4f93-a4aa-a587f6b89b81 c0e3a4caaea580aba239e59007b8ccd4 hg38 Primary Tumor C3L-04213.RNA-Seq.R1.T C3L-04213 GBM RNA-Seq tumor CPT0277180009 200204_UNC31-K00269_0263_AHG2CJBBXY_GGCATTCT-CTAGCTTG_S23_L006_R1_001.fastq.gz 3097091394 FASTQ NA 3a18317d-3520-42dc-8003-f9561853b8dc 37e5acf5c7f949bc8b179a366242afb5 NA Primary Tumor C3L-04213.RNA-Seq.R2.T C3L-04213 GBM RNA-Seq tumor CPT0277180009 200204_UNC31-K00269_0263_AHG2CJBBXY_GGCATTCT-CTAGCTTG_S23_L006_R2_001.fastq.gz 3633968119 FASTQ NA fb64ce39-84ad-40df-801d-f1e1146356a0 d5486d52ba6fbf1c59bf8f520c3cdb03 NA Primary Tumor C3L-04213.WGS.N C3L-04213 GBM WGS blood_normal CPT0277280002 CPT0277280002.WholeGenome.RP-2158.bam 27307720953 BAM NA 9016f6fc-f3f7-4ef3-b81e-f8d54cc931f2 abdded50a59683701393aed02d94942f hg19 Blood Derived Normal +C3L-04213.WGS.N.hg38 C3L-04213 GBM WGS blood_normal CPT0277280002 1141b2ba-0792-4d08-b5d4-7ec3fa19216b_wgs_gdc_realn.bam 79615801627 BAM NA e4a20d36-782a-4b14-a985-15b48497ff4e a3a5a591fff5a13d17e157b00ca7b40d hg38 Blood Derived Normal C3L-04213.WGS.T C3L-04213 GBM WGS tumor CPT0277180006 CPT0277180006.WholeGenome.RP-2158.bam 21897875310 BAM NA fa0facad-8fbc-4a5d-96c2-8411703567db 9379b0efdd9bc7ee849ca36c91202ce2 hg19 Primary Tumor +C3L-04213.WGS.T.hg38 C3L-04213 GBM WGS tumor CPT0277180006 c7af6007-1e13-438f-a4fe-d011d96669e3_wgs_gdc_realn.bam 65721149462 BAM NA bb4472a3-b931-436b-a6f2-028f0e236229 b99b4a6035f3ac0b8e337daf4bb739c6 hg38 Primary Tumor C3L-04213.WXS.N C3L-04213 GBM WXS blood_normal CPT0277280002 CPT0277280002.WholeExome.RP-1303.bam 22097690328 BAM NA ac9dc9ca-abc7-466b-b437-6c0ad01f54a8 53e77bc1116781b243dd7f107ba6217c hg19 Blood Derived Normal C3L-04213.WXS.T C3L-04213 GBM WXS tumor CPT0277180006 CPT0277180006.WholeExome.RP-1303.bam 18647890722 BAM NA 37eee658-03bf-40a1-9326-cf26d313e317 6edc71f9a21ec9cd3907b933b22c9517 hg19 Primary Tumor C3L-04216.MethArray.Green.A C3L-04216 LSCC Methylation Array tissue_normal CPT0304660007 204367470132_R07C01_Grn.idat 13677880 IDAT Green 346edda4-9ae0-40d7-ba73-92973eec1e3b b27cce8ec17965262e943bf34653355c NA Solid Tissue Normal @@ -13015,10 +13099,13 @@ C3L-04216.MethArray.Green.T C3L-04216 LSCC Methylation Array tumor CPT0304620007 C3L-04216.MethArray.Red.A C3L-04216 LSCC Methylation Array tissue_normal CPT0304660007 204367470132_R07C01_Red.idat 13677880 IDAT Red eb46a8bd-914c-4670-870b-8bd5403d4932 816bca7081988bee69c593fb4fc3a291 NA Solid Tissue Normal C3L-04216.MethArray.Red.T C3L-04216 LSCC Methylation Array tumor CPT0304620007 204367490056_R06C01_Red.idat 13677895 IDAT Red ef8e860e-f2a7-489b-a32f-b55a4951308a 1ee824d5d62e745509b60c78422d47d9 NA Primary Tumor C3L-04216.miRNA-Seq.T C3L-04216 LSCC miRNA-Seq tumor CPT0304620010 200325_UNC31-K00269_0272_AHHC2NBBXY_TCCCGA_S22_L001_R1_001.unaln.bam 199514132 BAM NA c3a12fb8-1db3-4e56-824b-e494e3b98776 a86a7be5b5f6d33b1f3475f421442197 NA Primary Tumor +C3L-04216.miRNA-Seq.T.hg38 C3L-04216 LSCC miRNA-Seq tumor CPT0304620010 7f05998c-a7cb-4435-817d-0d409b45d832_mirnaseq_gdc_realn.bam 218566365 BAM NA 64b100f8-dc15-4835-8027-d896ed7b53b5 f7e00c2c9d2234f473dd2efbe5f2e69a hg38 Primary Tumor C3L-04216.RNA-Seq.R1.T C3L-04216 LSCC RNA-Seq tumor CPT0304620010 200428_UNC31-K00269_0275_AHGCJVBBXY_CGTCTGCG-TTCACAAT_S30_L008_R1_001.fastq.gz 3391145613 FASTQ NA 2b801f00-6d57-4304-b6f0-b622e817a416 4722af6fab925e3871defd1690a1cc7f NA Primary Tumor C3L-04216.RNA-Seq.R2.T C3L-04216 LSCC RNA-Seq tumor CPT0304620010 200428_UNC31-K00269_0275_AHGCJVBBXY_CGTCTGCG-TTCACAAT_S30_L008_R2_001.fastq.gz 3498782473 FASTQ NA 56e142e2-4864-49a1-ad2e-475bf798ac98 11c83dbda791b3b768536a76a1c89014 NA Primary Tumor C3L-04216.WGS.N C3L-04216 LSCC WGS blood_normal CPT0304770002 CPT0304770002.WholeGenome.RP-2158.bam 29678900313 BAM NA 30fdf796-1a1c-4616-84ec-fec8fffc2208 d5179392a7b000ee70ad01898e0094a8 hg19 Blood Derived Normal +C3L-04216.WGS.N.hg38 C3L-04216 LSCC WGS blood_normal CPT0304770002 a2382a43-bed8-4b19-89cd-a00478fe45be_wgs_gdc_realn.bam 88687570987 BAM NA b20b030c-97f3-4a04-bac4-a3139d0bf489 e3a4b54cb385fc06742ab52da5352a71 hg38 Blood Derived Normal C3L-04216.WGS.T C3L-04216 LSCC WGS tumor CPT0304620007 CPT0304620007.WholeGenome.RP-2158.bam 25798342330 BAM NA 5babcc1c-b13a-4ac1-9002-97453f096e63 577f7c40bed9e73ecb4e9f1479c09210 hg19 Primary Tumor +C3L-04216.WGS.T.hg38 C3L-04216 LSCC WGS tumor CPT0304620007 44f13f39-00b5-4c5b-9582-e06616a7f968_wgs_gdc_realn.bam 73775630867 BAM NA 2fc1dd2f-7571-42ee-820c-68341519e90c 175ca3d882bc3b6ef4309c2e6c2121a8 hg38 Primary Tumor C3L-04216.WXS.A C3L-04216 LSCC WXS tissue_normal CPT0304660007 CPT0304660007.WholeExome.RP-1303.bam 19118619135 BAM NA 273d95d0-f65f-4356-80a7-361e1549048d 6b2203be32e0f6d6634d1f583a187419 hg19 Solid Tissue Normal C3L-04216.WXS.N C3L-04216 LSCC WXS blood_normal CPT0304770002 CPT0304770002.WholeExome.RP-1303.bam 21474490351 BAM NA c9489fce-1d85-45e0-aa6c-4ed549552072 42999502121bf99b8a170bfa52a951da hg19 Blood Derived Normal C3L-04216.WXS.T C3L-04216 LSCC WXS tumor CPT0304620007 CPT0304620007.WholeExome.RP-1303.bam 22409704447 BAM NA 8f9ec5e6-d77c-492f-8d9c-63e4d389bfe0 6d73d55128beafe4b6931daaa5c9688c hg19 Primary Tumor @@ -13127,14 +13214,19 @@ C3L-04336.MethArray.Green.T C3L-04336 LSCC Methylation Array tumor CPT0256850006 C3L-04336.MethArray.Red.A C3L-04336 LSCC Methylation Array tissue_normal CPT0256900006 204372030139_R08C01_Red.idat 13677880 IDAT Red 83d66753-5de6-49f6-be0f-917e0870fd75 342c9a485ffd7ea9f15c6b37d0adf736 NA Solid Tissue Normal C3L-04336.MethArray.Red.T C3L-04336 LSCC Methylation Array tumor CPT0256850006 204372030087_R05C01_Red.idat 13677880 IDAT Red 3b55f254-3278-44a7-8be9-bcc10aff58a2 f5f37536327457a107ba248e0ce73cd7 NA Primary Tumor C3L-04336.miRNA-Seq.A C3L-04336 LSCC miRNA-Seq tissue_normal CPT0256900009 200513_UNC31-K00269_0278_BHH7Y7BBXY_ACTTGA_S2_L007_R1_001.unaln.bam 240489947 BAM NA de442dd3-f415-4416-96d0-2b71b960e325 85b540d208975ee5fd2e6cf4604ff4be NA Solid Tissue Normal +C3L-04336.miRNA-Seq.A.hg38 C3L-04336 LSCC miRNA-Seq tissue_normal CPT0256900009 7763789d-e974-4cec-890f-c4a8344986e2_mirnaseq_gdc_realn.bam 269068843 BAM NA d4475d97-3a18-426a-ac3d-5caa6d5581aa 274802b4d66a7b3f70e67a0438d316b5 hg38 Solid Tissue Normal C3L-04336.miRNA-Seq.T C3L-04336 LSCC miRNA-Seq tumor CPT0256850009 200224_UNC31-K00269_0267_AHC722BBXY_ACTTGA_S8_L006_R1_001.unaln.bam 247377140 BAM NA db3c9223-1cf8-48c4-a112-73b4398856bb 4c87083a0d547701871277bdf70c957e NA Primary Tumor +C3L-04336.miRNA-Seq.T.hg38 C3L-04336 LSCC miRNA-Seq tumor CPT0256850009 0e194943-07db-4824-b62f-1d480f2c17ac_mirnaseq_gdc_realn.bam 278844565 BAM NA 2f722b20-f229-4687-a80a-24013791a7de 675b92a4f569fdca61c132e0acae5222 hg38 Primary Tumor C3L-04336.RNA-Seq.R1.A C3L-04336 LSCC RNA-Seq tissue_normal CPT0256900009 200505_UNC31-K00269_0277_AHGFKNBBXY_GAATGAGA-GAGGCATT_S7_L002_R1_001.fastq.gz 4978141232 FASTQ NA 1d5e8d44-c758-4c01-856f-923ce90088d9 70fa0b56f324ee773a988e32817bfa96 NA Solid Tissue Normal C3L-04336.RNA-Seq.R1.T C3L-04336 LSCC RNA-Seq tumor CPT0256850009 200428_UNC32-K00270_0243_AHG3Y3BBXY_GAATGAGA-GAGGCATT_S24_L006_R1_001.fastq.gz 4978146204 FASTQ NA 1956c0ac-22a8-4eaf-b902-60f761cffb68 23e35a17c316aafcd001762a4dfbfa1c NA Primary Tumor C3L-04336.RNA-Seq.R2.A C3L-04336 LSCC RNA-Seq tissue_normal CPT0256900009 200505_UNC31-K00269_0277_AHGFKNBBXY_GAATGAGA-GAGGCATT_S7_L002_R2_001.fastq.gz 5495426971 FASTQ NA bde959a3-48f7-439a-b1ea-2b56936ee3d2 6ca4f07b564944132b9ba88db5f9d5d3 NA Solid Tissue Normal C3L-04336.RNA-Seq.R2.T C3L-04336 LSCC RNA-Seq tumor CPT0256850009 200428_UNC32-K00270_0243_AHG3Y3BBXY_GAATGAGA-GAGGCATT_S24_L006_R2_001.fastq.gz 5212057900 FASTQ NA a9ca1e0c-0d79-4d8a-bc85-fc1efec794d2 6cc1d452194a86574a18815089a75a5a NA Primary Tumor C3L-04336.WGS.N C3L-04336 LSCC WGS blood_normal CPT0257000002 CPT0257000002.WholeGenome.RP-2158.bam 28382645326 BAM NA 2ecd0917-d886-4c27-bdf6-120e30b0547a 1779317918fef5d7de564f3e6ac239a1 hg19 Blood Derived Normal +C3L-04336.WGS.N.hg38 C3L-04336 LSCC WGS blood_normal CPT0257000002 4878f4fb-bb0d-4f9c-87d6-d6959c0ea731_wgs_gdc_realn.bam 84241551453 BAM NA aa673546-1c0d-4508-9ab6-dad3e4b748ae 516cf87116a439381c4bebdb45fbb1ae hg38 Blood Derived Normal C3L-04336.WGS.T C3L-04336 LSCC WGS tumor CPT0256850006 CPT0256850006.WholeGenome.RP-2158.bam 23904262100 BAM NA 5c700df8-9626-4edc-91bf-2d4bb64e7e01 a7bbfed150c4fe35569c271aed2452a3 hg19 Primary Tumor +C3L-04336.WGS.T.hg38 C3L-04336 LSCC WGS tumor CPT0256850006 fe1754f9-bcfe-4701-99e2-50d94e7e8c5c_wgs_gdc_realn.bam 69650090525 BAM NA 43875a6f-1286-408a-b54d-150b608901ac cc69219088f916e17128821f2035df75 hg38 Primary Tumor C3L-04336.WXS.A C3L-04336 LSCC WXS tissue_normal CPT0256900006 CPT0256900006.WholeExome.RP-1303.bam 23424790332 BAM NA 27ef8125-eb08-49ba-8fa4-29506994b11c 1ee228102dd5a40e0a3483dc786aff89 hg19 Solid Tissue Normal +C3L-04336.WXS.N C3L-04336 LSCC WXS blood_normal CPT0257000002 CPT0257000002.WholeExome.RP-1303.bam 40854463163 BAM NA 32bfc1cf-0d5d-46cf-8d68-6c3661a27668 02963ee5bd27c35a19bf0ebd2c862961 hg19 Blood Derived Normal C3L-04336.WXS.T C3L-04336 LSCC WXS tumor CPT0256850006 CPT0256850006.WholeExome.RP-1303.bam 18432713807 BAM NA e74c96f3-771d-48ad-b57c-7adf3dfd0a3c 0f1750d62bce0c4899895c1d66c8ac53 hg19 Primary Tumor C3L-04339.MethArray.Green.T C3L-04339 GBM Methylation Array tumor CPT0258090006 204372030024_R05C01_Grn.idat 13677905 IDAT Green 06b7bb69-881a-4d8d-9e69-657c155e681c 470a9ce9da03a235c3a2ca1706d7f695 NA Primary Tumor C3L-04339.MethArray.Red.T C3L-04339 GBM Methylation Array tumor CPT0258090006 204372030024_R05C01_Red.idat 13677905 IDAT Red 3731cfc1-aeba-4f8d-b51b-acebe911b3cb 92c0ba0cbd2729a623d194e3e7d8c16a NA Primary Tumor @@ -13142,7 +13234,9 @@ C3L-04339.miRNA-Seq.T C3L-04339 GBM miRNA-Seq tumor CPT0258090008 200526_UNC32-K C3L-04339.RNA-Seq.R1.T C3L-04339 GBM RNA-Seq tumor CPT0258090008 200204_UNC31-K00269_0263_AHG2CJBBXY_ATGAGGCC-GTTAATTG_S16_L004_R1_001.fastq.gz 2500941440 FASTQ NA c6a9244a-4ab2-4f78-be63-b74401e4b903 66a2a3ac3cec1d5cf11e3c01f94ec89f NA Primary Tumor C3L-04339.RNA-Seq.R2.T C3L-04339 GBM RNA-Seq tumor CPT0258090008 200204_UNC31-K00269_0263_AHG2CJBBXY_ATGAGGCC-GTTAATTG_S16_L004_R2_001.fastq.gz 2964399534 FASTQ NA 1ad6b56f-857b-4e87-ba96-77141a60b898 5d6636c43070a2cacdb4285e10f1ed91 NA Primary Tumor C3L-04339.WGS.N C3L-04339 GBM WGS blood_normal CPT0258190002 CPT0258190002.WholeGenome.RP-2158.bam 25848841555 BAM NA 1afa5fa1-59fe-4184-8c5e-e6d57323443d 38ba15e16722fdec5cae606b5533a243 hg19 Blood Derived Normal +C3L-04339.WGS.N.hg38 C3L-04339 GBM WGS blood_normal CPT0258190002 33f46088-32c6-48b4-8a6b-2290453f2095_wgs_gdc_realn.bam 76854036007 BAM NA a78992b6-5d44-4e49-ba64-f99c06d9700e 898dc9eba69c7828d56ea0a380681697 hg38 Blood Derived Normal C3L-04339.WGS.T C3L-04339 GBM WGS tumor CPT0258090006 CPT0258090006.WholeGenome.RP-2158.bam 27146278918 BAM NA 48351d83-cc2f-4826-8731-0830df0aa09c ee2ec8e19fa8e277b6ece8d424b9d350 hg19 Primary Tumor +C3L-04339.WGS.T.hg38 C3L-04339 GBM WGS tumor CPT0258090006 ed17cbff-3df3-49c3-8e1d-46d2731f57b3_wgs_gdc_realn.bam 80406894411 BAM NA 3dfe2c34-88ce-41e9-b6ab-88aac3b761a2 c8c073518bf0dd19165be93e57213015 hg38 Primary Tumor C3L-04339.WXS.N C3L-04339 GBM WXS blood_normal CPT0258190002 CPT0258190002.WholeExome.RP-1303.bam 20907651385 BAM NA 909af21e-8e05-49c8-b296-9dd8a03ebe9f a5598640185818bd449a9199291a3197 hg19 Blood Derived Normal C3L-04339.WXS.T C3L-04339 GBM WXS tumor CPT0258090006 CPT0258090006.WholeExome.RP-1303.bam 22723005441 BAM NA 8e3ea70c-2461-4d72-9a04-9e06088513c4 2a9af14ae1d392fba85d3cab7f2c29cb hg19 Primary Tumor C3L-04354.MethArray.Green.A C3L-04354 HNSCC Methylation Array tissue_normal CPT0243140010 203220070102_R03C01_Grn.idat 13676206 IDAT Green 284f369f-50bf-4ac8-9bfb-dbd7f09d1b30 9da7752264459379f5827322885b17dd NA Solid Tissue Normal @@ -13176,10 +13270,13 @@ C3L-04354.WXS.T.hg38 C3L-04354 HNSCC WXS tumor CPT0243090006 ff57bec1-fdf3-4efe- C3L-04359.MethArray.Green.T C3L-04359 GBM Methylation Array tumor CPT0243280006 204372030022_R07C01_Grn.idat 13677905 IDAT Green 1bb74675-9bdd-4a36-a0d7-561e1e6782f0 5047c4f7120da816a9edd7e9ad3593ee NA Primary Tumor C3L-04359.MethArray.Red.T C3L-04359 GBM Methylation Array tumor CPT0243280006 204372030022_R07C01_Red.idat 13677905 IDAT Red 43e71864-4b28-4f3c-badd-e8e4f50058a8 764ab25aecf9a10b560773c8220249a5 NA Primary Tumor C3L-04359.miRNA-Seq.T C3L-04359 GBM miRNA-Seq tumor CPT0243280009 200403_UNC31-K00269_0274_AHCF7GBBXY_GCCAAT_S30_L002_R1_001.unaln.bam 309843615 BAM NA 5187c868-9062-449b-a2dc-51a88211022a 88c1f4f1a53f9077ac7405480a88f8f4 NA Primary Tumor +C3L-04359.miRNA-Seq.T.hg38 C3L-04359 GBM miRNA-Seq tumor CPT0243280009 69909312-f440-473d-bea5-cb1a6f0da238_mirnaseq_gdc_realn.bam 361913473 BAM NA 627019e3-a8ed-43a8-93c3-f84c81f0c47e 560e381590dc5332cef08fef439d68d6 hg38 Primary Tumor C3L-04359.RNA-Seq.R1.T C3L-04359 GBM RNA-Seq tumor CPT0243280009 200129_UNC31-K00269_0261_AHG2CLBBXY_GCTTGTCA-GAACATAC_S10_L008_R1_001.fastq.gz 3681317054 FASTQ NA b42d0852-cae1-4758-a678-bc012f13aea9 a93e8e0b3921e78abcf0445d4a1b8ed2 NA Primary Tumor C3L-04359.RNA-Seq.R2.T C3L-04359 GBM RNA-Seq tumor CPT0243280009 200129_UNC31-K00269_0261_AHG2CLBBXY_GCTTGTCA-GAACATAC_S10_L008_R2_001.fastq.gz 4083506159 FASTQ NA 88640d20-f2e8-42d8-a9aa-eb03821c31f7 74c62c6dffbfe2515f03bdece6dbe8b6 NA Primary Tumor C3L-04359.WGS.N C3L-04359 GBM WGS blood_normal CPT0243350002 CPT0243350002.WholeGenome.RP-2158.bam 25332896750 BAM NA 5b4ed69a-9a13-44a2-b07e-e2ee7b686d46 0c6178488a46048d304b5ebdad803264 hg19 Blood Derived Normal +C3L-04359.WGS.N.hg38 C3L-04359 GBM WGS blood_normal CPT0243350002 d7706205-c0e2-4a84-a0d3-5496598cbf10_wgs_gdc_realn.bam 73863141089 BAM NA a64412f1-74c9-486b-98a7-9eba8d21f9fb 41f89f7e23e3a576a440b798399b2c61 hg38 Blood Derived Normal C3L-04359.WGS.T C3L-04359 GBM WGS tumor CPT0243280006 CPT0243280006.WholeGenome.RP-2158.bam 23903590429 BAM NA 8ed53d0f-a2e7-4652-bbe9-776bc915a317 617a44eda943cf2649a780e494e6ae5b hg19 Primary Tumor +C3L-04359.WGS.T.hg38 C3L-04359 GBM WGS tumor CPT0243280006 7dbf52e5-6cf7-44bf-b211-2941a5917899_wgs_gdc_realn.bam 70650337535 BAM NA d7d2db0a-f513-4241-9a62-c47f70046392 9296a7e66c1950e35fb1ea83a8ccd26e hg38 Primary Tumor C3L-04359.WXS.N C3L-04359 GBM WXS blood_normal CPT0243350002 CPT0243350002.WholeExome.RP-1303.bam 32069118972 BAM NA 10b4ba0a-fec2-41f2-936d-4dffb4bddd33 8893841f2b964d1d9b4373b2c9ec7f96 hg19 Blood Derived Normal C3L-04359.WXS.T C3L-04359 GBM WXS tumor CPT0243280006 CPT0243280006.WholeExome.RP-1303.bam 29459091783 BAM NA 24e7e71e-5588-4fb1-8837-044df6abd811 6a6acd19425e1ffc965882acda1882c1 hg19 Primary Tumor C3L-04361.MethArray.Green.A C3L-04361 LSCC Methylation Array tissue_normal CPT0243460006 204367490090_R08C01_Grn.idat 13677885 IDAT Green dc1f0b25-ec54-4692-9796-618a539ca955 5fb57657dfc7bc81695734f26f7134fd NA Solid Tissue Normal @@ -13187,7 +13284,9 @@ C3L-04361.MethArray.Green.T C3L-04361 LSCC Methylation Array tumor CPT0243370006 C3L-04361.MethArray.Red.A C3L-04361 LSCC Methylation Array tissue_normal CPT0243460006 204367490090_R08C01_Red.idat 13677885 IDAT Red 4d3d80a2-2508-40ab-b5d5-21d4d26c2e24 f7b7c0553e73d500239036234f27d2c9 NA Solid Tissue Normal C3L-04361.MethArray.Red.T C3L-04361 LSCC Methylation Array tumor CPT0243370006 204372030024_R06C01_Red.idat 13677905 IDAT Red e2946636-c143-4dc4-892d-d61c7eb1c651 be2e936ca81ddeabcb371c1dbcc7d772 NA Primary Tumor C3L-04361.miRNA-Seq.A C3L-04361 LSCC miRNA-Seq tissue_normal CPT0243460013 200513_UNC31-K00269_0278_BHH7Y7BBXY_CGTACG_S10_L007_R1_001.unaln.bam 166756425 BAM NA de525a6b-07cf-4ca3-bee9-107791f0acb4 0083b624cdf49fdbf256418316ac08c1 NA Solid Tissue Normal +C3L-04361.miRNA-Seq.A.hg38 C3L-04361 LSCC miRNA-Seq tissue_normal CPT0243460013 9b592bbe-1949-463a-a615-aa7f0ccab8d1_mirnaseq_gdc_realn.bam 191108749 BAM NA 6bbdf0a6-ad0e-45ec-8d0e-82972ba26bad 9be91afd2928a0a30907293bd23594ce hg38 Solid Tissue Normal C3L-04361.miRNA-Seq.T C3L-04361 LSCC miRNA-Seq tumor CPT0243370009 200224_UNC31-K00269_0267_AHC722BBXY_CGGAAT_S37_L007_R1_001.unaln.bam 274965317 BAM NA 93aad943-4444-4144-80e7-27c990f1e253 f4fd7d3834377afb93c0d4ab388f9562 NA Primary Tumor +C3L-04361.miRNA-Seq.T.hg38 C3L-04361 LSCC miRNA-Seq tumor CPT0243370009 7145f826-1435-4daa-a19a-d797720da78c_mirnaseq_gdc_realn.bam 297664255 BAM NA aa29fda2-c6b4-4237-954a-d45c2fa619cf 26095f928ec6bbe2f77861c2c0c06ee7 hg38 Primary Tumor C3L-04361.RNA-Seq.R1.A C3L-04361 LSCC RNA-Seq tissue_normal CPT0243460013 200505_UNC31-K00269_0277_AHGFKNBBXY_ATTGTGAA-TGCATTGC_S22_L006_R1_001.fastq.gz 3528552695 FASTQ NA 36a67212-56b0-4ecc-a9e5-3f1399f8df22 c5f1065efddb4319bee1969411353dfb NA Solid Tissue Normal C3L-04361.RNA-Seq.R1.T C3L-04361 LSCC RNA-Seq tumor CPT0243370009 200428_UNC32-K00270_0243_AHG3Y3BBXY_TCGTAGTG-AGACTTGG_S5_L002_R1_001.fastq.gz 3669104306 FASTQ NA 4319f038-f4b4-4273-8fa2-ee5269adce7c 54886dc0f2c7dbab746e9e19c41a0427 NA Primary Tumor C3L-04361.RNA-Seq.R2.A C3L-04361 LSCC RNA-Seq tissue_normal CPT0243460013 200505_UNC31-K00269_0277_AHGFKNBBXY_ATTGTGAA-TGCATTGC_S22_L006_R2_001.fastq.gz 4006020067 FASTQ NA 0bddc86c-98fe-4302-a0c2-267cea3c03a0 050ed390294d9a31406b6972beea6894 NA Solid Tissue Normal @@ -13195,15 +13294,20 @@ C3L-04361.RNA-Seq.R2.T C3L-04361 LSCC RNA-Seq tumor CPT0243370009 200428_UNC32-K C3L-04361.WGS.N C3L-04361 LSCC WGS blood_normal CPT0243530002 CPT0243530002.WholeGenome.RP-2158.bam 33559873290 BAM NA 406c524c-0315-4786-a890-b57094c79f47 88a5c1123df8df294911a3be7a47eb3b hg19 Blood Derived Normal C3L-04361.WGS.N C3L-04361 LSCC WGS blood_normal CPT0243530002 CPT0243530002.WholeGenome.RP-2158.bam 33616871030 BAM NA b2ac9f92-0aa9-476e-a9aa-667db7ee8ef5 0ede51828c14f436ec326f867307cf32 hg19 Blood Derived Normal C3L-04361.WGS.T C3L-04361 LSCC WGS tumor CPT0243370006 CPT0243370006.WholeGenome.RP-2158.bam 30172514538 BAM NA 6ff02772-d4d3-48f6-9125-618dcab976ee d59c9fa3400363d480992a274a9b3b46 hg19 Primary Tumor +C3L-04361.WGS.T.hg38 C3L-04361 LSCC WGS tumor CPT0243370006 6eb8c4ee-7977-49ea-9e1f-dc640032b670_wgs_gdc_realn.bam 88686010736 BAM NA 8f462f6a-1d87-4669-bd8d-c4a32b90af14 a73c67e18f21095064fa75b664e50611 hg38 Primary Tumor C3L-04361.WXS.A C3L-04361 LSCC WXS tissue_normal CPT0243460006 CPT0243460006.WholeExome.RP-1303.bam 18648176730 BAM NA 4cad459b-4fbc-4e9d-9155-c2470d949270 3d164599bdab9fcfcfb344edf20793c9 hg19 Solid Tissue Normal C3L-04361.WXS.N C3L-04361 LSCC WXS blood_normal CPT0243530002 CPT0243530002.WholeExome.RP-1303.bam 26739372608 BAM NA 35a1cd2a-65d5-4e0c-865e-d8798a3fe512 3a0ae302f586954fd8b47b51c1ba28c9 hg19 Blood Derived Normal C3L-04361.WXS.T C3L-04361 LSCC WXS tumor CPT0243370006 CPT0243370006.WholeExome.RP-1303.bam 23398349836 BAM NA 711f72d8-f9a8-436f-829e-57172f3a0bf8 22a21baec8edd9d18e88cc6ff1bc2493 hg19 Primary Tumor C3L-04362.miRNA-Seq.T C3L-04362 GBM miRNA-Seq tumor CPT0233810012 200403_UNC31-K00269_0274_AHCF7GBBXY_ATCACG_S25_L002_R1_001.unaln.bam 218585221 BAM NA 74efb625-7e6f-4645-b8cf-38bef59d3b3e badbf1629cee3e520add04bdba9f164d NA Primary Tumor +C3L-04362.miRNA-Seq.T.hg38 C3L-04362 GBM miRNA-Seq tumor CPT0233810012 dad677bc-13f3-463b-8645-8b0d2b7522a1_mirnaseq_gdc_realn.bam 243210995 BAM NA a506ff9c-db7b-44b2-a981-d3b199e42133 54435d3e81c607640a96488e6293fe91 hg38 Primary Tumor C3L-04362.RNA-Seq.R1.T C3L-04362 GBM RNA-Seq tumor CPT0233810012 200129_UNC31-K00269_0261_AHG2CLBBXY_CCGCGGTT-AGCGCTAG_S5_L007_R1_001.fastq.gz 4022817927 FASTQ NA 9be40cc5-bccd-40ec-b730-d1c3ad3e0e6c 3b96f98595354bd05237c4cfa1d3f108 NA Primary Tumor C3L-04362.RNA-Seq.R2.T C3L-04362 GBM RNA-Seq tumor CPT0233810012 200129_UNC31-K00269_0261_AHG2CLBBXY_CCGCGGTT-AGCGCTAG_S5_L007_R2_001.fastq.gz 4498661993 FASTQ NA 710ec59e-1735-4dd5-ba70-ce35329cac5c b0071d3c6aaf2cd5b9f8c29fcb69096d NA Primary Tumor C3L-04362.WGS.N C3L-04362 GBM WGS blood_normal CPT0233870002 CPT0233870002.WholeGenome.RP-2158.bam 21818987189 BAM NA 48b7e473-ab3c-4dd1-85a5-170e3044b384 84ff0eb41d5d02f3b641ec787b84dec0 hg19 Blood Derived Normal +C3L-04362.WGS.N.hg38 C3L-04362 GBM WGS blood_normal CPT0233870002 6b29a573-c2f6-4614-9f25-14c918babfa8_wgs_gdc_realn.bam 62812379070 BAM NA 1ac3d361-eef2-4263-85c2-f8748a9379cf e9aca33ad0448904c426468091283757 hg38 Blood Derived Normal C3L-04362.WGS.T C3L-04362 GBM WGS tumor CPT0233810006 CPT0233810006.WholeGenome.RP-2158.bam 25430839932 BAM NA 83bea774-1862-4ec9-8f58-e724421f7f1f cb972885ed82534ba94d66f4a5708866 hg19 Primary Tumor +C3L-04362.WGS.T.hg38 C3L-04362 GBM WGS tumor CPT0233810006 54bcff95-090d-41c1-92c6-66140f4b3ab9_wgs_gdc_realn.bam 73951272849 BAM NA dddd8326-8131-4431-8f69-3bb571ce57e9 7a58c50af833f4a7908c947307e7e476 hg38 Primary Tumor C3L-04362.WXS.N C3L-04362 GBM WXS blood_normal CPT0233870002 CPT0233870002.WholeExome.RP-1303.bam 34607798389 BAM NA 8c1fda25-6db9-4fef-abce-0bd6d84af2c5 27158bc936c4061b13b5aea3f4841f4c hg19 Blood Derived Normal +C3L-04362.WXS.T C3L-04362 GBM WXS tumor CPT0233810006 CPT0233810006.WholeExome.RP-1303.bam 22808134674 BAM NA f329c74e-37e8-4d8b-b491-2cce7ee8954b bb48500a97d17de8a08e535ba8972a65 hg19 Primary Tumor C3L-04365.MethArray.Green.A C3L-04365 LUAD Methylation Array tissue_normal CPT0243620006 203561620008_R02C01_Grn.idat 13676236 IDAT Green edfd76df-75d4-4c67-a864-6a49c47596ab c903774c00f60317bcd9103d15521d4f NA Solid Tissue Normal C3L-04365.MethArray.Green.T C3L-04365 LUAD Methylation Array tumor CPT0243560007 203561450027_R04C01_Grn.idat 13676221 IDAT Green 175ed898-0663-4be9-a17c-14d56a06ff0d d8d9c2a3c98499cc6760100217afd221 NA Primary Tumor C3L-04365.MethArray.Red.A C3L-04365 LUAD Methylation Array tissue_normal CPT0243620006 203561620008_R02C01_Red.idat 13676236 IDAT Red 33f98e53-0b48-4222-8a2b-e98561ade887 6483bc2f53c88f052fe1c0ef14faf1e7 NA Solid Tissue Normal @@ -13237,13 +13341,18 @@ C3L-04367.MethArray.Green.T C3L-04367 LSCC Methylation Array tumor CPT0243930006 C3L-04367.MethArray.Red.A C3L-04367 LSCC Methylation Array tissue_normal CPT0243940006 204367400087_R05C01_Red.idat 13677880 IDAT Red 0145cdca-7740-47e3-a512-6af69117ff19 2b52fdb715a0c92a648635aa7da640dd NA Solid Tissue Normal C3L-04367.MethArray.Red.T C3L-04367 LSCC Methylation Array tumor CPT0243930006 204367490061_R05C01_Red.idat 13677885 IDAT Red 6a3cc898-2fc7-413d-8a42-ac11abfc8b2e f38f6ab751ec8452cbdd5113f4acebef NA Primary Tumor C3L-04367.miRNA-Seq.A C3L-04367 LSCC miRNA-Seq tissue_normal CPT0243940009 200513_UNC31-K00269_0278_BHH7Y7BBXY_ACTTGA_S2_L005_R1_001.unaln.bam 234292241 BAM NA 4185f9c4-fa9d-4190-81d0-69c0786fa607 28186b1085114b18d181fd832db3fb0c NA Solid Tissue Normal +C3L-04367.miRNA-Seq.A.hg38 C3L-04367 LSCC miRNA-Seq tissue_normal CPT0243940009 55b7d942-9086-42e6-8b2f-6abfeec5d7e1_mirnaseq_gdc_realn.bam 260382374 BAM NA f69f0cdc-1ff2-42e4-aa4b-4bc51f83806b 97e005d5d63270d2baa207cd3526cd05 hg38 Solid Tissue Normal C3L-04367.miRNA-Seq.T C3L-04367 LSCC miRNA-Seq tumor CPT0243930009 200224_UNC31-K00269_0267_AHC722BBXY_CCAACA_S36_L007_R1_001.unaln.bam 239986011 BAM NA c8759de0-f611-4e5a-9b29-3dc2e1baf228 f876730e9f78789d78f4fdfe185bef54 NA Primary Tumor +C3L-04367.miRNA-Seq.T.hg38 C3L-04367 LSCC miRNA-Seq tumor CPT0243930009 52184acc-f4df-4503-9230-52d4e52c0033_mirnaseq_gdc_realn.bam 268205976 BAM NA 96aef43b-6a37-4be1-9540-5795e9648c2e 4bd66b3ffc22331c2c153c6ca6e30217 hg38 Primary Tumor C3L-04367.RNA-Seq.R1.A C3L-04367 LSCC RNA-Seq tissue_normal CPT0243940009 200505_UNC32-K00270_0245_AHH5FVBBXY_TGGATCGA-GTGCGATA_S8_L006_R1_001.fastq.gz 4286563271 FASTQ NA 05be3890-a463-4fbd-96ae-deee3dde3878 341ad4e3d289b967ab65edcc22f7825a NA Solid Tissue Normal C3L-04367.RNA-Seq.R1.T C3L-04367 LSCC RNA-Seq tumor CPT0243930009 200428_UNC32-K00270_0243_AHG3Y3BBXY_GATTCTGC-GACGAGAG_S4_L001_R1_001.fastq.gz 3654971803 FASTQ NA 87bd023a-c17c-474f-bf93-d48fa86693c2 a58d59d4c151689960a5c06c57ea8262 NA Primary Tumor C3L-04367.RNA-Seq.R2.A C3L-04367 LSCC RNA-Seq tissue_normal CPT0243940009 200505_UNC32-K00270_0245_AHH5FVBBXY_TGGATCGA-GTGCGATA_S8_L006_R2_001.fastq.gz 4635442449 FASTQ NA d86aa58d-2fde-4e3f-9cc3-fb2dcc9276c1 0c9683559ef77a9d0341e88f4dd862b3 NA Solid Tissue Normal C3L-04367.RNA-Seq.R2.T C3L-04367 LSCC RNA-Seq tumor CPT0243930009 200428_UNC32-K00270_0243_AHG3Y3BBXY_GATTCTGC-GACGAGAG_S4_L001_R2_001.fastq.gz 4050399091 FASTQ NA 76ca8adc-2d34-4e5a-9949-cdbaf86d1349 2aee2fe2baa5769bde093e884aa566bc NA Primary Tumor C3L-04367.WGS.N C3L-04367 LSCC WGS blood_normal CPT0244050002 CPT0244050002.WholeGenome.RP-2158.bam 25403172493 BAM NA ff135c1d-dc1e-46ca-af94-de34e471d172 43c17d9a7a1c64f30f8b221652d23cf0 hg19 Blood Derived Normal +C3L-04367.WGS.N.hg38 C3L-04367 LSCC WGS blood_normal CPT0244050002 66c866b7-f3dd-4c3f-9317-9d2d37e285ec_wgs_gdc_realn.bam 78025372440 BAM NA a952e3fe-75bd-458c-9bea-ff26afd66c0f d7fd251aa82375d27a514e6f80a56579 hg38 Blood Derived Normal C3L-04367.WGS.T C3L-04367 LSCC WGS tumor CPT0243930006 CPT0243930006.WholeGenome.RP-2158.bam 27117639764 BAM NA 7d6fd656-0016-483c-9b10-4d0794c2503f 845f9b82cdc9d68bd7a7e0ea888d9911 hg19 Primary Tumor +C3L-04367.WGS.T.hg38 C3L-04367 LSCC WGS tumor CPT0243930006 6c67e8c8-b814-4670-be14-4625361e289e_wgs_gdc_realn.bam 83847748117 BAM NA 1f946dd6-dedf-475d-ba71-f6a6f69b47c4 b31992f61ba1076f495737648e40a747 hg38 Primary Tumor +C3L-04367.WXS.A C3L-04367 LSCC WXS tissue_normal CPT0243940006 CPT0243940006.WholeExome.RP-1303.bam 42507906378 BAM NA 66299e3e-a0f8-4046-ba6b-824195342c93 6b620e92fd107fa1d9fa8f313ad01cc8 hg19 Solid Tissue Normal C3L-04367.WXS.N C3L-04367 LSCC WXS blood_normal CPT0244050002 CPT0244050002.WholeExome.RP-1303.bam 30578608788 BAM NA a8e46ac6-8b0a-41e9-b815-1aaca95669de e3e8586358661e64feb5e2e395a23b43 hg19 Blood Derived Normal C3L-04367.WXS.T C3L-04367 LSCC WXS tumor CPT0243930006 CPT0243930006.WholeExome.RP-1303.bam 24329997687 BAM NA f72960b2-75ff-46d4-9f8b-72080a0cd75d 2475a2853d807c0b35740b43dff12488 hg19 Primary Tumor C3L-04378.MethArray.Green.A C3L-04378 LSCC Methylation Array tissue_normal CPT0253130009 204367460011_R08C01_Grn.idat 13677880 IDAT Green 232c3ef2-609a-4c83-b961-0f5f305bf3fc c5cb446dec3342d2ef004124cab6a0c1 NA Solid Tissue Normal @@ -13251,13 +13360,17 @@ C3L-04378.MethArray.Green.T C3L-04378 LSCC Methylation Array tumor CPT0253090006 C3L-04378.MethArray.Red.A C3L-04378 LSCC Methylation Array tissue_normal CPT0253130009 204367460011_R08C01_Red.idat 13677880 IDAT Red 01c3b983-09d6-4204-95ec-67e446fabf48 d37b3ef87d3279657c2c42bf8ba79113 NA Solid Tissue Normal C3L-04378.MethArray.Red.T C3L-04378 LSCC Methylation Array tumor CPT0253090006 204367400148_R05C01_Red.idat 13677880 IDAT Red 145c2fd5-fd36-4906-a1e3-801a454f27ce d744effd0a002882809abd78371ef453 NA Primary Tumor C3L-04378.miRNA-Seq.A C3L-04378 LSCC miRNA-Seq tissue_normal CPT0253130006 200513_UNC31-K00269_0278_BHH7Y7BBXY_TAATCG_S42_L006_R1_001.unaln.bam 230826500 BAM NA fd5d86d3-2b5b-4049-a005-77ecda179018 f7283561229ad3f95d69864fff2eec83 NA Solid Tissue Normal +C3L-04378.miRNA-Seq.A.hg38 C3L-04378 LSCC miRNA-Seq tissue_normal CPT0253130006 e968ea62-5948-4a2a-a3ce-d54fd82afa39_mirnaseq_gdc_realn.bam 255662049 BAM NA 6c4b821b-2507-40e8-b51c-2735cbf05667 e42fd9af2e2004d3f8fdec1607d779c2 hg38 Solid Tissue Normal C3L-04378.miRNA-Seq.T C3L-04378 LSCC miRNA-Seq tumor CPT0253090013 200325_UNC31-K00269_0272_AHHC2NBBXY_TAATCG_S18_L001_R1_001.unaln.bam 198109814 BAM NA 60ad6ebb-f994-4403-b62b-b384bd3e9e33 d515543e4d81d8032d350299a770b3ac NA Primary Tumor +C3L-04378.miRNA-Seq.T.hg38 C3L-04378 LSCC miRNA-Seq tumor CPT0253090013 8fb9d030-c6b1-46e7-98ce-db199e0438c2_mirnaseq_gdc_realn.bam 217721301 BAM NA 22017cab-9e2e-411b-9b14-e064ad844349 d3c7cfe34e113dddbcc6c695a7e0ecfb hg38 Primary Tumor C3L-04378.RNA-Seq.R1.A C3L-04378 LSCC RNA-Seq tissue_normal CPT0253130006 200505_UNC32-K00270_0246_BHH5F5BBXY_GCGCAAGC-TCACGCCG_S27_L007_R1_001.fastq.gz 3418029399 FASTQ NA bf5e8149-2c96-4d05-97be-0c728c51af90 eba722686f88f2d8afab420bec7706af NA Solid Tissue Normal C3L-04378.RNA-Seq.R1.T C3L-04378 LSCC RNA-Seq tumor CPT0253090013 200428_UNC31-K00269_0275_AHGCJVBBXY_CGCTATGT-TCCGACAC_S26_L007_R1_001.fastq.gz 4228164914 FASTQ NA 8d742e60-e2ad-4582-86e7-fafbc1dd0c23 21dad26826390cd37d598c85bf9a9d14 NA Primary Tumor C3L-04378.RNA-Seq.R2.A C3L-04378 LSCC RNA-Seq tissue_normal CPT0253130006 200505_UNC32-K00270_0246_BHH5F5BBXY_GCGCAAGC-TCACGCCG_S27_L007_R2_001.fastq.gz 4223918706 FASTQ NA d616db06-54ba-454a-bd91-9356ab737e17 ab39c16b32548f17ab6a96ab18882331 NA Solid Tissue Normal C3L-04378.RNA-Seq.R2.T C3L-04378 LSCC RNA-Seq tumor CPT0253090013 200428_UNC31-K00269_0275_AHGCJVBBXY_CGCTATGT-TCCGACAC_S26_L007_R2_001.fastq.gz 4348810230 FASTQ NA 0c78e1e1-c0dd-48d6-a34b-6ef85a299153 b8ef57e0c39a8401e1da88786ed47dc8 NA Primary Tumor C3L-04378.WGS.N C3L-04378 LSCC WGS blood_normal CPT0253240002 CPT0253240002.WholeGenome.RP-2158.bam 30279299575 BAM NA 24a0a9ea-bff7-4403-89b4-5705129d6245 0ab83e8f6d4aa93cc27946a1c42109f9 hg19 Blood Derived Normal +C3L-04378.WGS.N.hg38 C3L-04378 LSCC WGS blood_normal CPT0253240002 862ce011-5c33-4644-8531-1b57170aa9aa_wgs_gdc_realn.bam 91657286140 BAM NA 442a8e18-cb34-4035-af1c-6dd4be88647c 0a5d36be679db7ce5607d6673b8ec100 hg38 Blood Derived Normal C3L-04378.WGS.T C3L-04378 LSCC WGS tumor CPT0253090006 CPT0253090006.WholeGenome.RP-2158.bam 24254876470 BAM NA d4e5d622-26fa-4af6-a200-4f7cfb0a2402 7586783811b2158f7464aac883d94255 hg19 Primary Tumor +C3L-04378.WGS.T.hg38 C3L-04378 LSCC WGS tumor CPT0253090006 996dad95-2c54-4866-9aca-9b5e90775fb7_wgs_gdc_realn.bam 70450220270 BAM NA 8b8103d0-513b-4ecc-b879-c7c690b87660 a0e43f29d693914fecc5e3b8ddf13a7b hg38 Primary Tumor C3L-04378.WXS.A C3L-04378 LSCC WXS tissue_normal CPT0253130009 CPT0253130009.WholeExome.RP-1303.bam 18317138231 BAM NA 8fdc3cde-074e-45ce-b815-8ecb017fc619 583ed46d69a46772239c3f4a5b88c700 hg19 Solid Tissue Normal C3L-04378.WXS.N C3L-04378 LSCC WXS blood_normal CPT0253240002 CPT0253240002.WholeExome.RP-1303.bam 26078072039 BAM NA bffabf7f-40c2-41a3-a8dc-62a3d8d2d607 2fb92711aa5ce4c95b076ce4e78f930c hg19 Blood Derived Normal C3L-04378.WXS.T C3L-04378 LSCC WXS tumor CPT0253090006 CPT0253090006.WholeExome.RP-1303.bam 26208736814 BAM NA 45c9e664-9e16-4af1-91a0-b3c910c3e00b 8e892199e4b6d86a23f73423d40c1169 hg19 Primary Tumor @@ -13266,14 +13379,20 @@ C3L-04379.MethArray.Green.T C3L-04379 LSCC Methylation Array tumor CPT0258790006 C3L-04379.MethArray.Red.A C3L-04379 LSCC Methylation Array tissue_normal CPT0258830006 204372030079_R07C01_Red.idat 13677880 IDAT Red 68718e29-aedb-4a4f-813a-8c234f662bc0 de5a373446ae5772995b51d9f89c0805 NA Solid Tissue Normal C3L-04379.MethArray.Red.T C3L-04379 LSCC Methylation Array tumor CPT0258790006 204372030161_R06C01_Red.idat 13677880 IDAT Red fb7bead9-02bf-4491-a0d4-530c69288bcd 6ded99d9b81496074737ab33658263c6 NA Primary Tumor C3L-04379.miRNA-Seq.A C3L-04379 LSCC miRNA-Seq tissue_normal CPT0258830009 200513_UNC31-K00269_0278_BHH7Y7BBXY_TAGCTT_S22_L007_R1_001.unaln.bam 279438602 BAM NA 67d13804-ec66-481f-afcc-b9f6d97d948a c2f10401bea4c3cc5d2d93affb58173d NA Solid Tissue Normal +C3L-04379.miRNA-Seq.A.hg38 C3L-04379 LSCC miRNA-Seq tissue_normal CPT0258830009 f59b66fd-e54e-40d7-b4c0-8b3df7add380_mirnaseq_gdc_realn.bam 304081288 BAM NA ab19416a-c1fd-4e2d-8a59-657040d7f97c 39fa170ab6fd38abb7a21967ae047e6e hg38 Solid Tissue Normal C3L-04379.miRNA-Seq.T C3L-04379 LSCC miRNA-Seq tumor CPT0258790009 200224_UNC31-K00269_0267_AHC722BBXY_TAGCTT_S10_L006_R1_001.unaln.bam 235231599 BAM NA 807cebfa-a3e9-4127-9ae5-dfef6c8bfdf1 0aeb96e477996612d23c5eeba5d67797 NA Primary Tumor +C3L-04379.miRNA-Seq.T.hg38 C3L-04379 LSCC miRNA-Seq tumor CPT0258790009 4495da1a-11be-495a-b806-4ad64b4bd81f_mirnaseq_gdc_realn.bam 260039928 BAM NA c5633da2-b2a2-446d-b191-a0f1e90cafff 7ec8c36a14d7943c32eb6d7032ba6d14 hg38 Primary Tumor C3L-04379.RNA-Seq.R1.A C3L-04379 LSCC RNA-Seq tissue_normal CPT0258830009 200505_UNC31-K00269_0277_AHGFKNBBXY_CATAATAC-TTCTAACG_S10_L003_R1_001.fastq.gz 4402756906 FASTQ NA a67e93ba-923d-4ef4-9215-1d9399680796 dc72fc93c27915680196271d4df3136a NA Solid Tissue Normal C3L-04379.RNA-Seq.R1.T C3L-04379 LSCC RNA-Seq tumor CPT0258790009 200428_UNC32-K00270_0243_AHG3Y3BBXY_CATAATAC-TTCTAACG_S26_L007_R1_001.fastq.gz 3602507671 FASTQ NA 375cfed3-d945-482e-8f3a-e44533ff20d4 56d2ba42d86c24bda1ac5b0269f36807 NA Primary Tumor C3L-04379.RNA-Seq.R2.A C3L-04379 LSCC RNA-Seq tissue_normal CPT0258830009 200505_UNC31-K00269_0277_AHGFKNBBXY_CATAATAC-TTCTAACG_S10_L003_R2_001.fastq.gz 4910717795 FASTQ NA 35d9c7a4-08c2-4aee-a984-22634bcc7fb2 c64dbfae7adc73caeddb8481e13974b1 NA Solid Tissue Normal C3L-04379.RNA-Seq.R2.T C3L-04379 LSCC RNA-Seq tumor CPT0258790009 200428_UNC32-K00270_0243_AHG3Y3BBXY_CATAATAC-TTCTAACG_S26_L007_R2_001.fastq.gz 3802883422 FASTQ NA 52102e19-6dce-4914-aad1-5b6ba6ad1419 bb5ea8bcfff2980953f1f95a0cc5bea0 NA Primary Tumor C3L-04379.WGS.N C3L-04379 LSCC WGS blood_normal CPT0258940002 CPT0258940002.WholeGenome.RP-2158.bam 22380669080 BAM NA d5198e12-66f9-4b64-a782-e494f0053eec ba8d5e5bb03d69adb1b03d2c71e34124 hg19 Blood Derived Normal +C3L-04379.WGS.N.hg38 C3L-04379 LSCC WGS blood_normal CPT0258940002 626f0195-bf7f-46f9-8461-8ca13e90aa70_wgs_gdc_realn.bam 65992264424 BAM NA fd240ca7-62df-4822-b84f-556db25e7339 939172114cb901bf7727568b54dc7643 hg38 Blood Derived Normal C3L-04379.WGS.T C3L-04379 LSCC WGS tumor CPT0258790006 CPT0258790006.WholeGenome.RP-2158.bam 21247752803 BAM NA bb4b23e1-83f6-4b1a-b242-89a8e7705cf6 2b9ae148eb4fb65b051db57b19cb29f8 hg19 Primary Tumor +C3L-04379.WGS.T.hg38 C3L-04379 LSCC WGS tumor CPT0258790006 3f41e1ca-98fb-430f-9872-00ab38b27063_wgs_gdc_realn.bam 61570515658 BAM NA 17fafc2f-bee1-4083-96d3-42a8ad6db92c 1b2c8b46ac441747601819d20da81c18 hg38 Primary Tumor +C3L-04379.WXS.A C3L-04379 LSCC WXS tissue_normal CPT0258830006 CPT0258830006.WholeExome.RP-1303.bam 33637470015 BAM NA 5494aa26-7b40-4199-9d6f-ff471f4f356e 156fa4e5e4481c6859196a1ef0b43b54 hg19 Solid Tissue Normal C3L-04379.WXS.N C3L-04379 LSCC WXS blood_normal CPT0258940002 CPT0258940002.WholeExome.RP-1303.bam 25626888869 BAM NA cfb8e11a-2bbc-4acf-8c17-2717461b1cc7 f1263f8fd00b64063f923926614828b2 hg19 Blood Derived Normal +C3L-04379.WXS.T C3L-04379 LSCC WXS tumor CPT0258790006 CPT0258790006.WholeExome.RP-1303.bam 49847641656 BAM NA 6faf7b10-e4f1-4517-a7f6-f5880624b632 0c43af254f088af4fcbd3d44f842cabd hg19 Primary Tumor C3L-04391.MethArray.Green.A C3L-04391 LSCC Methylation Array tissue_normal CPT0234580006 203220070156_R06C01_Grn.idat 13676216 IDAT Green 7a99f97b-4c82-4531-8512-c5635a34b54a 3e7dc913ddb144880f44b09e622fc737 NA Solid Tissue Normal C3L-04391.MethArray.Green.T C3L-04391 LSCC Methylation Array tumor CPT0234560006 203219670019_R07C01_Grn.idat 13676231 IDAT Green 80757296-522f-4787-8fae-cd729eb30468 6cce0f866a16061ec453a085a084b1c7 NA Primary Tumor C3L-04391.MethArray.Red.A C3L-04391 LSCC Methylation Array tissue_normal CPT0234580006 203220070156_R06C01_Red.idat 13676216 IDAT Red 55e771df-0026-4450-a67d-336dc7fdbcc7 d06c0ec5d0aa308772b3a3a0465f5511 NA Solid Tissue Normal @@ -13307,10 +13426,13 @@ C3L-04402.MethArray.Green.T C3L-04402 LSCC Methylation Array tumor CPT0281060006 C3L-04402.MethArray.Red.A C3L-04402 LSCC Methylation Array tissue_normal CPT0281070006 204372030106_R08C01_Red.idat 13677885 IDAT Red e6c24881-9108-4b94-a3a0-5cd6e8894966 3f4c478a4d684bf32f2c76b28e42d7ab NA Solid Tissue Normal C3L-04402.MethArray.Red.T C3L-04402 LSCC Methylation Array tumor CPT0281060006 204372030022_R08C01_Red.idat 13677905 IDAT Red cddbec4b-8215-443f-83c1-17d101aed108 f62540d1747e4940920c7bd130415a1e NA Primary Tumor C3L-04402.miRNA-Seq.T C3L-04402 LSCC miRNA-Seq tumor CPT0281060009 200224_UNC31-K00269_0267_AHC722BBXY_GTAGAG_S17_L008_R1_001.unaln.bam 194460114 BAM NA 94230a07-3396-48b9-b03e-5b65b85151a0 d0b24cb838140b87202dbe9c338b1872 NA Primary Tumor +C3L-04402.miRNA-Seq.T.hg38 C3L-04402 LSCC miRNA-Seq tumor CPT0281060009 3905789c-2b5b-48e1-aaf6-da28dbe90e61_mirnaseq_gdc_realn.bam 220711963 BAM NA 2581b871-3cf7-425d-b0d1-5fa821dc1cc8 ded6b402250dcec8e5c300eb9a73c7a6 hg38 Primary Tumor C3L-04402.RNA-Seq.R1.T C3L-04402 LSCC RNA-Seq tumor CPT0281060009 200428_UNC31-K00269_0276_BHH5TMBBXY_TAATACAG-ATATTCAC_S1_L001_R1_001.fastq.gz 3116262455 FASTQ NA fd64d4c2-e55f-4b11-8b79-424993ec283f 21bae8de5a63f2c0343ea8e28bbe02ff NA Primary Tumor C3L-04402.RNA-Seq.R2.T C3L-04402 LSCC RNA-Seq tumor CPT0281060009 200428_UNC31-K00269_0276_BHH5TMBBXY_TAATACAG-ATATTCAC_S1_L001_R2_001.fastq.gz 3434270972 FASTQ NA fcae66d9-1278-4d7a-85c1-0f8151392c0c d73a289f6c6c95edec8612602667d758 NA Primary Tumor C3L-04402.WGS.N C3L-04402 LSCC WGS blood_normal CPT0285780002 CPT0285780002.WholeGenome.RP-2158.bam 26025114290 BAM NA c66365f5-f774-4440-ba53-b39f53e5c3d8 1ef42f8c7720279c1b156da9f75f6753 hg19 Blood Derived Normal +C3L-04402.WGS.N.hg38 C3L-04402 LSCC WGS blood_normal CPT0285780002 4dc3a96a-b762-4a23-b6ba-38791790b86b_wgs_gdc_realn.bam 77030429119 BAM NA 8f8f6dc0-542c-4b18-8264-62c54578599c 1dfc7c33402d06d75cbc409986913874 hg38 Blood Derived Normal C3L-04402.WGS.T C3L-04402 LSCC WGS tumor CPT0281060006 CPT0281060006.WholeGenome.RP-2158.bam 19746056389 BAM NA 7b403441-0fe4-430b-b00a-165209c8fdc5 0c4c2e8b819b3611f4d976d499e6b1ff hg19 Primary Tumor +C3L-04402.WGS.T.hg38 C3L-04402 LSCC WGS tumor CPT0281060006 04193e63-80b9-4eeb-862e-6f78b23a3103_wgs_gdc_realn.bam 56543096092 BAM NA eb602344-26fb-4aa6-a33f-82fd9b19b04f d04a1832d39cea7ae1a9eca8397727b9 hg38 Primary Tumor C3L-04402.WXS.A C3L-04402 LSCC WXS tissue_normal CPT0281070006 CPT0281070006.WholeExome.RP-1303.bam 24820615379 BAM NA 8b87bc6e-850b-4e37-b459-069a97163374 a3ece565d681913ddd692f2c54ddd619 hg19 Solid Tissue Normal C3L-04402.WXS.N C3L-04402 LSCC WXS blood_normal CPT0285780002 CPT0285780002.WholeExome.RP-1303.bam 22012058038 BAM NA bd612b61-4d52-4e6b-adae-be387cac6614 b9198c7199d8aa542a271c6959c71a0e hg19 Blood Derived Normal C3L-04402.WXS.T C3L-04402 LSCC WXS tumor CPT0281060006 CPT0281060006.WholeExome.RP-1303.bam 21787447379 BAM NA 3f12f4eb-be0e-4775-a038-3b831f549d6e 5cd3aaa60e67b89f5cf6ca986e34ecd1 hg19 Primary Tumor @@ -13319,13 +13441,18 @@ C3L-04404.MethArray.Green.T C3L-04404 LSCC Methylation Array tumor CPT0284380006 C3L-04404.MethArray.Red.A C3L-04404 LSCC Methylation Array tissue_normal CPT0284390006 204367490151_R07C01_Red.idat 13677895 IDAT Red b293851a-3683-4db9-a3d3-5896b43002aa 5ff52fe3db3c372df6670cf3ea9f96b7 NA Solid Tissue Normal C3L-04404.MethArray.Red.T C3L-04404 LSCC Methylation Array tumor CPT0284380006 204372030015_R03C01_Red.idat 13677905 IDAT Red 1990235a-bf62-49c3-989b-bb707dba1547 ac2f948d214eb19b6efae8afb3baa7df NA Primary Tumor C3L-04404.miRNA-Seq.A C3L-04404 LSCC miRNA-Seq tissue_normal CPT0284390009 200513_UNC31-K00269_0278_BHH7Y7BBXY_ACAGTG_S1_L005_R1_001.unaln.bam 279938526 BAM NA 28ab0146-7bc6-4183-aef2-c86422e5f31d 88ed164c185d3a16f056dfed0d6f64d1 NA Solid Tissue Normal +C3L-04404.miRNA-Seq.A.hg38 C3L-04404 LSCC miRNA-Seq tissue_normal CPT0284390009 e1dadd45-c572-4847-bf33-7d89c4d92356_mirnaseq_gdc_realn.bam 306891555 BAM NA b5d0566e-17a1-44be-89a5-afe33cae417a e4a6bc514ce6f8744285f8699beef795 hg38 Solid Tissue Normal C3L-04404.miRNA-Seq.T C3L-04404 LSCC miRNA-Seq tumor CPT0284380009 200224_UNC31-K00269_0267_AHC722BBXY_GTGAAA_S19_L008_R1_001.unaln.bam 217957334 BAM NA f3ce923d-8c3a-4106-9bf3-1a32327e686d 55c9fd4ff7a446847069fd4062f27084 NA Primary Tumor +C3L-04404.miRNA-Seq.T.hg38 C3L-04404 LSCC miRNA-Seq tumor CPT0284380009 596d776a-ca00-4cf6-9539-1987a7c7f864_mirnaseq_gdc_realn.bam 246656063 BAM NA ba61bc82-85be-4f45-993c-e4266919fd7a e1ba639929e5bd4997243fd68702aceb hg38 Primary Tumor C3L-04404.RNA-Seq.R1.A C3L-04404 LSCC RNA-Seq tissue_normal CPT0284390009 200505_UNC32-K00270_0245_AHH5FVBBXY_ATCCACTG-AGGTGCGT_S5_L006_R1_001.fastq.gz 3898324935 FASTQ NA f077f27d-61bd-40e8-b4d4-996c9b7e63e7 fd2c7c2fb77e5c0285fe1e7867f4ce89 NA Solid Tissue Normal C3L-04404.RNA-Seq.R1.T C3L-04404 LSCC RNA-Seq tumor CPT0284380009 200428_UNC31-K00269_0276_BHH5TMBBXY_ATGTAAGT-ACTCTATG_S3_L001_R1_001.fastq.gz 4713549564 FASTQ NA eed3326a-8be4-4296-98f0-d7478de78a84 c5a335f915aa9d80eab6ded19a6057c8 NA Primary Tumor C3L-04404.RNA-Seq.R2.A C3L-04404 LSCC RNA-Seq tissue_normal CPT0284390009 200505_UNC32-K00270_0245_AHH5FVBBXY_ATCCACTG-AGGTGCGT_S5_L006_R2_001.fastq.gz 4164092950 FASTQ NA b553992d-4327-4ea9-8af6-adb773e2eada d64877d0505d2b726eac1316770c1873 NA Solid Tissue Normal C3L-04404.RNA-Seq.R2.T C3L-04404 LSCC RNA-Seq tumor CPT0284380009 200428_UNC31-K00269_0276_BHH5TMBBXY_ATGTAAGT-ACTCTATG_S3_L001_R2_001.fastq.gz 5261756231 FASTQ NA 96ae514b-7148-41d6-8cff-f4586b0080e6 a3fd737b3b49c4eb80868801c3be9a1f NA Primary Tumor C3L-04404.WGS.N C3L-04404 LSCC WGS blood_normal CPT0285800002 CPT0285800002.WholeGenome.RP-2158.bam 29646130722 BAM NA 1082fb0c-b52b-474f-ae57-cf48bb479ffa 1ed848562c50f1875488da3b488c2eec hg19 Blood Derived Normal +C3L-04404.WGS.N.hg38 C3L-04404 LSCC WGS blood_normal CPT0285800002 c2b9b16d-31c2-4824-bea8-127c4e3184ad_wgs_gdc_realn.bam 91194189527 BAM NA f31033d4-9f98-4c28-abec-417846bf4ec5 6a8574cfd05ffbf686d704a63d575143 hg38 Blood Derived Normal C3L-04404.WGS.T C3L-04404 LSCC WGS tumor CPT0284380006 CPT0284380006.WholeGenome.RP-2158.bam 24868549930 BAM NA 9f5feb9e-9e84-49f0-9731-b1d495e8ebca 427ee249a2fb3d17b249b076b781329a hg19 Primary Tumor +C3L-04404.WGS.T.hg38 C3L-04404 LSCC WGS tumor CPT0284380006 118c8acc-4317-4f49-8349-d5cb8d9bf837_wgs_gdc_realn.bam 76839276981 BAM NA 8aff48b1-a9d7-4250-86d9-f8e23f58b1a6 b3a5d37f18b100ba6311ba11b60eb0e8 hg38 Primary Tumor +C3L-04404.WXS.A C3L-04404 LSCC WXS tissue_normal CPT0284390006 CPT0284390006.WholeExome.RP-1303.bam 39490557557 BAM NA b5ac2615-5340-49b5-b50f-2b3f7b10c70c c0a96edbf05110833e036ef09015ce66 hg19 Solid Tissue Normal C3L-04404.WXS.N C3L-04404 LSCC WXS blood_normal CPT0285800002 CPT0285800002.WholeExome.RP-1303.bam 29846450687 BAM NA 3220f985-596c-4bb9-aace-a4030293b220 600df09cd21f6ce1b18f735fb455b4d5 hg19 Blood Derived Normal C3L-04404.WXS.T C3L-04404 LSCC WXS tumor CPT0284380006 CPT0284380006.WholeExome.RP-1303.bam 23050141330 BAM NA 8fa124c3-854d-40ab-9f47-108a11c1bf80 2dba0db3bec64a40c27b653663830999 hg19 Primary Tumor C3L-04408.MethArray.Green.A C3L-04408 LSCC Methylation Array tissue_normal CPT0284610006 204367490090_R07C01_Grn.idat 13677885 IDAT Green 3a0cd6be-00e3-415c-bf70-a350fbb30f22 2d74eca53a51ab95415d0b39d83d4c3f NA Solid Tissue Normal @@ -13333,24 +13460,33 @@ C3L-04408.MethArray.Green.T C3L-04408 LSCC Methylation Array tumor CPT0284600006 C3L-04408.MethArray.Red.A C3L-04408 LSCC Methylation Array tissue_normal CPT0284610006 204367490090_R07C01_Red.idat 13677885 IDAT Red 356c2837-6fa6-45e5-9d7d-881bf1dd5f25 08739130e2baa2a8de93f156024d4eb2 NA Solid Tissue Normal C3L-04408.MethArray.Red.T C3L-04408 LSCC Methylation Array tumor CPT0284600006 204367490061_R04C01_Red.idat 13677885 IDAT Red ed72239b-a05e-4a80-b6c4-8f30e3e92d19 af05462aea6f616eac78b8671c72fe2c NA Primary Tumor C3L-04408.miRNA-Seq.A C3L-04408 LSCC miRNA-Seq tissue_normal CPT0284610013 200513_UNC31-K00269_0278_BHH7Y7BBXY_GTTTCG_S21_L007_R1_001.unaln.bam 200886341 BAM NA d071baf6-4ecd-4322-8cdc-6b9b9ae0f2ff d2b30c4c1075a66750213c14efb2e182 NA Solid Tissue Normal +C3L-04408.miRNA-Seq.A.hg38 C3L-04408 LSCC miRNA-Seq tissue_normal CPT0284610013 2598a129-cb28-4946-99e5-f59b8d080d3a_mirnaseq_gdc_realn.bam 221556584 BAM NA 90cee161-5d78-468a-86e3-2c2af8b4ab5d 272253272ba822f1a004281a5824905d hg38 Solid Tissue Normal C3L-04408.miRNA-Seq.T C3L-04408 LSCC miRNA-Seq tumor CPT0284600009 200224_UNC31-K00269_0267_AHC722BBXY_CATTTT_S35_L007_R1_001.unaln.bam 204358869 BAM NA 5fc43bad-07fa-4483-934e-9906d0665f66 88d2143a56e32ae466d98d50fa94ab08 NA Primary Tumor +C3L-04408.miRNA-Seq.T.hg38 C3L-04408 LSCC miRNA-Seq tumor CPT0284600009 15c01b50-ce5d-4315-9a86-3884f964d2eb_mirnaseq_gdc_realn.bam 226520036 BAM NA c9f6b212-902c-4e50-8e9f-b0d80d6cdb9e b24071f2dba06a1ac4ec42c599204554 hg38 Primary Tumor C3L-04408.RNA-Seq.R1.A C3L-04408 LSCC RNA-Seq tissue_normal CPT0284610013 200505_UNC31-K00269_0277_AHGFKNBBXY_GCCACAGG-CATGCCAT_S23_L006_R1_001.fastq.gz 3367240024 FASTQ NA fe4116e1-39c9-4eda-a971-88e61d168499 5e549fbc508b5a666fed6896bfda77ce NA Solid Tissue Normal C3L-04408.RNA-Seq.R1.T C3L-04408 LSCC RNA-Seq tumor CPT0284600009 200428_UNC32-K00270_0243_AHG3Y3BBXY_AGCCTCAT-AGTAGAGA_S3_L001_R1_001.fastq.gz 3126891913 FASTQ NA 6db37f19-2cf1-4804-9ea9-3755f15d45c6 c4e275678dd1b8b9934ae8d300c5b88f NA Primary Tumor C3L-04408.RNA-Seq.R2.A C3L-04408 LSCC RNA-Seq tissue_normal CPT0284610013 200505_UNC31-K00269_0277_AHGFKNBBXY_GCCACAGG-CATGCCAT_S23_L006_R2_001.fastq.gz 3838125023 FASTQ NA 8834d01d-64c6-41be-ab13-f3228b045b9b cb56511816ab86afa60ffc509688427e NA Solid Tissue Normal C3L-04408.RNA-Seq.R2.T C3L-04408 LSCC RNA-Seq tumor CPT0284600009 200428_UNC32-K00270_0243_AHG3Y3BBXY_AGCCTCAT-AGTAGAGA_S3_L001_R2_001.fastq.gz 3477799413 FASTQ NA b79cba98-e659-47ce-b313-15389cf4dea3 e0117ef134b776be3f2626a1ac852bb7 NA Primary Tumor C3L-04408.WGS.N C3L-04408 LSCC WGS blood_normal CPT0285820002 CPT0285820002.WholeGenome.RP-2158.bam 26047707163 BAM NA 6915800c-5570-4161-8495-4176e117d84f a1135bd38b44c234c49e4ffd8e7b35c7 hg19 Blood Derived Normal +C3L-04408.WGS.N.hg38 C3L-04408 LSCC WGS blood_normal CPT0285820002 f74707b1-70dd-42ca-90f2-acae0b761eed_wgs_gdc_realn.bam 77045791474 BAM NA ab0d9bba-a79f-42d5-b891-fd83ea48ee87 89338fc379d07770615e7484f362b491 hg38 Blood Derived Normal C3L-04408.WGS.T C3L-04408 LSCC WGS tumor CPT0284600006 CPT0284600006.WholeGenome.RP-2158.bam 22001221086 BAM NA 6ba01002-54df-43c3-a1bd-d10bea94292f 1fa6bac07c74cdfc7ea71117b408b11d hg19 Primary Tumor +C3L-04408.WGS.T.hg38 C3L-04408 LSCC WGS tumor CPT0284600006 d8122677-3787-48ef-9182-08b6a6a0d32a_wgs_gdc_realn.bam 63055932486 BAM NA 1193c011-222b-4e7c-bc97-30d6a39d344b ca9b9d11e831685f4095596ff7a2ea95 hg38 Primary Tumor C3L-04408.WXS.A C3L-04408 LSCC WXS tissue_normal CPT0284610006 CPT0284610006.WholeExome.RP-1303.bam 26825997271 BAM NA 7ae40560-cbee-4ea7-9c2b-57ede09cd5d2 02db2597b52215ec8d97d2bed127ee8e hg19 Solid Tissue Normal +C3L-04408.WXS.N C3L-04408 LSCC WXS blood_normal CPT0285820002 CPT0285820002.WholeExome.RP-1303.bam 39120091683 BAM NA f6defcc6-d73a-4937-9e96-bd49e7bdde4f e1b80ea7515c3cd110ea6aeb257d5c9e hg19 Blood Derived Normal C3L-04408.WXS.T C3L-04408 LSCC WXS tumor CPT0284600006 CPT0284600006.WholeExome.RP-1303.bam 25782794076 BAM NA 7d40169a-8341-4ddb-8632-8915b9653d70 e3f936302444f57db9068680b26263b2 hg19 Primary Tumor C3L-04409.MethArray.Green.A C3L-04409 LSCC Methylation Array tissue_normal CPT0284340006 204367490061_R08C01_Grn.idat 13677885 IDAT Green c07d77c7-d85b-4a9c-980b-2e231a4a3996 402e9fa628a005fdfdf5b5430fdb3e80 NA Solid Tissue Normal C3L-04409.MethArray.Green.T C3L-04409 LSCC Methylation Array tumor CPT0284320006 204372030022_R03C01_Grn.idat 13677905 IDAT Green 76b3dc2e-4081-4044-8af2-9c4c9bd6cc7a 01419033b5aef7ed725e1dddad908d91 NA Primary Tumor C3L-04409.MethArray.Red.A C3L-04409 LSCC Methylation Array tissue_normal CPT0284340006 204367490061_R08C01_Red.idat 13677885 IDAT Red a6c27b60-9076-4a60-85d3-8e9a6193f7fc 547fffbf2cd81b696fc81539b1da6e0c NA Solid Tissue Normal C3L-04409.MethArray.Red.T C3L-04409 LSCC Methylation Array tumor CPT0284320006 204372030022_R03C01_Red.idat 13677905 IDAT Red 9320403e-fdd2-4ac8-9b9f-d9407fc414d5 07965e01f9f9bf12de42bd2d55aa9409 NA Primary Tumor C3L-04409.miRNA-Seq.T C3L-04409 LSCC miRNA-Seq tumor CPT0284320009 200224_UNC31-K00269_0267_AHC722BBXY_GTCCGC_S18_L008_R1_001.unaln.bam 223684758 BAM NA 89417943-a8b8-4561-a068-a52fb830a4d3 0c623dba5577e0b0339a3b34dc106989 NA Primary Tumor +C3L-04409.miRNA-Seq.T.hg38 C3L-04409 LSCC miRNA-Seq tumor CPT0284320009 b5e7d0a7-3e64-4f63-bbf3-3dc5eb2dce2e_mirnaseq_gdc_realn.bam 249007952 BAM NA 0560f4e7-9dfa-4ae1-8bcf-90b51101f9e8 652df742b63cc40a317a67099e1a8d20 hg38 Primary Tumor C3L-04409.RNA-Seq.R1.T C3L-04409 LSCC RNA-Seq tumor CPT0284320009 200428_UNC31-K00269_0276_BHH5TMBBXY_CGGCGTGA-GCGCCTGT_S2_L001_R1_001.fastq.gz 3768250785 FASTQ NA 3cdd6265-3ac5-47f8-b323-dc6bb6b12930 a65a40a7160f2eba343bb74a6482a0f4 NA Primary Tumor C3L-04409.RNA-Seq.R2.T C3L-04409 LSCC RNA-Seq tumor CPT0284320009 200428_UNC31-K00269_0276_BHH5TMBBXY_CGGCGTGA-GCGCCTGT_S2_L001_R2_001.fastq.gz 4267899311 FASTQ NA 17b4edc1-eb6b-459d-8bbb-0763f336df32 42ac9f35bb977b5f146678cc3ac4d7b6 NA Primary Tumor C3L-04409.WGS.N C3L-04409 LSCC WGS blood_normal CPT0285790002 CPT0285790002.WholeGenome.RP-2158.bam 29506415090 BAM NA bfceb32c-10f6-4bd6-b8f3-b6bcddc36f98 2cbc1361be27b884822fd70931e14550 hg19 Blood Derived Normal +C3L-04409.WGS.N.hg38 C3L-04409 LSCC WGS blood_normal CPT0285790002 0cbade83-4b62-4a62-8cff-6a43e26ec405_wgs_gdc_realn.bam 87643866032 BAM NA fca9b34d-230b-4cea-8541-c74075b3c378 97842bd950844a855c8065db21e1f37b hg38 Blood Derived Normal C3L-04409.WGS.T C3L-04409 LSCC WGS tumor CPT0284320006 CPT0284320006.WholeGenome.RP-2158.bam 23961113305 BAM NA b524a883-8206-4bf5-a4c6-b7b2a25771b6 0c519ec227c50c1b02154744d42df297 hg19 Primary Tumor +C3L-04409.WGS.T.hg38 C3L-04409 LSCC WGS tumor CPT0284320006 0355f102-39d4-45dd-b8fe-5882fa1b3f65_wgs_gdc_realn.bam 69407582494 BAM NA c9198356-c57b-442b-ae1c-246bb941236a 71c7feeb8cbc7f3fe6b758e068ec30bd hg38 Primary Tumor +C3L-04409.WXS.A C3L-04409 LSCC WXS tissue_normal CPT0284340006 CPT0284340006.WholeExome.RP-1303.bam 37663217851 BAM NA de92e6db-5aa2-4751-a5c9-2baa6a986359 29a0bec5fe29c455939905a3a0882710 hg19 Solid Tissue Normal C3L-04409.WXS.N C3L-04409 LSCC WXS blood_normal CPT0285790002 CPT0285790002.WholeExome.RP-1303.bam 27744960066 BAM NA 859cae9d-2d75-4e89-bc77-52e892bf06ec cde8f4f88ec49cf798aa59262e5166a3 hg19 Blood Derived Normal C3L-04409.WXS.T C3L-04409 LSCC WXS tumor CPT0284320006 CPT0284320006.WholeExome.RP-1303.bam 18696521735 BAM NA fff4aaab-7147-469c-97ee-a9c8b85f9ccb 82f4464a7ae1107277acf2b8950f1b73 hg19 Primary Tumor C3L-04410.MethArray.Green.A C3L-04410 LSCC Methylation Array tissue_normal CPT0284490006 204372030074_R07C01_Grn.idat 13677880 IDAT Green 411fece2-88ee-4723-9d4a-87595f754504 69c7e7926f710a6840130a6d728a1f4b NA Solid Tissue Normal @@ -13358,13 +13494,17 @@ C3L-04410.MethArray.Green.T C3L-04410 LSCC Methylation Array tumor CPT0284470006 C3L-04410.MethArray.Red.A C3L-04410 LSCC Methylation Array tissue_normal CPT0284490006 204372030074_R07C01_Red.idat 13677880 IDAT Red e7d31600-486e-4f5f-83ac-aa9ffdff0aac c1e17505ac0f0a8d4716ed555100201e NA Solid Tissue Normal C3L-04410.MethArray.Red.T C3L-04410 LSCC Methylation Array tumor CPT0284470006 204372030106_R04C01_Red.idat 13677885 IDAT Red eaa55eba-65bd-4c14-8ccf-18a772bb3ff9 5bf83a32a35ba2f52737caeb4d742ca3 NA Primary Tumor C3L-04410.miRNA-Seq.A C3L-04410 LSCC miRNA-Seq tissue_normal CPT0284490009 200513_UNC31-K00269_0278_BHH7Y7BBXY_GCCAAT_S14_L005_R1_001.unaln.bam 307675827 BAM NA 5923c826-fa42-483a-841b-9ecb3dc59672 05ed413ba2b27e2186371cc17897ba4d NA Solid Tissue Normal +C3L-04410.miRNA-Seq.A.hg38 C3L-04410 LSCC miRNA-Seq tissue_normal CPT0284490009 370bc377-8746-4164-b503-d16f12ba80ad_mirnaseq_gdc_realn.bam 334311950 BAM NA 4ba98c9a-6d26-4478-91fc-d357877ef08b f8c990779599816e9bb129a27725d467 hg38 Solid Tissue Normal C3L-04410.miRNA-Seq.T C3L-04410 LSCC miRNA-Seq tumor CPT0284470009 200224_UNC31-K00269_0267_AHC722BBXY_GTGGCC_S20_L008_R1_001.unaln.bam 245614612 BAM NA 022be749-6937-4adb-932c-93ee22c63721 81a317f3547d8e648b78361e648c6fe9 NA Primary Tumor +C3L-04410.miRNA-Seq.T.hg38 C3L-04410 LSCC miRNA-Seq tumor CPT0284470009 139d98af-0cae-4e91-be1a-8a838ea630ba_mirnaseq_gdc_realn.bam 270871650 BAM NA 1247e480-aca8-4f5c-8ea6-ff2e3cef4d41 1c61974be74cf1a6bebca097aa9b9221 hg38 Primary Tumor C3L-04410.RNA-Seq.R1.A C3L-04410 LSCC RNA-Seq tissue_normal CPT0284490009 200505_UNC32-K00270_0245_AHH5FVBBXY_GCTTGTCA-GAACATAC_S6_L006_R1_001.fastq.gz 3910935753 FASTQ NA 19640734-3489-487d-83cd-b266bb249147 85a10421c1219b940fef76de4516f8a8 NA Solid Tissue Normal C3L-04410.RNA-Seq.R1.T C3L-04410 LSCC RNA-Seq tumor CPT0284470009 200428_UNC31-K00269_0276_BHH5TMBBXY_GCACGGAC-GTCTCGCA_S4_L001_R1_001.fastq.gz 3847762279 FASTQ NA 5c562fe8-ab90-4894-a916-70639384266b 7ada3faf3d252e39c8c509eff8442cc5 NA Primary Tumor C3L-04410.RNA-Seq.R2.A C3L-04410 LSCC RNA-Seq tissue_normal CPT0284490009 200505_UNC32-K00270_0245_AHH5FVBBXY_GCTTGTCA-GAACATAC_S6_L006_R2_001.fastq.gz 4194200637 FASTQ NA e482f4fd-5cca-4c2a-828f-c154e9f64c4a 5a52f7f9b313f8415188dd3f4f131a59 NA Solid Tissue Normal C3L-04410.RNA-Seq.R2.T C3L-04410 LSCC RNA-Seq tumor CPT0284470009 200428_UNC31-K00269_0276_BHH5TMBBXY_GCACGGAC-GTCTCGCA_S4_L001_R2_001.fastq.gz 4322814786 FASTQ NA b1563fb9-5b45-412d-aa9d-f8bdae672abe 9dd7d68f638a79008eb8e080c7ed16bd NA Primary Tumor C3L-04410.WGS.N C3L-04410 LSCC WGS blood_normal CPT0285830002 CPT0285830002.WholeGenome.RP-2158.bam 24297696890 BAM NA 9bec8282-6380-41e9-922e-2c466b1d59a5 89cecf569115fae9399d1612fe0272ec hg19 Blood Derived Normal +C3L-04410.WGS.N.hg38 C3L-04410 LSCC WGS blood_normal CPT0285830002 ddaede42-d686-4b86-8706-ec0d5aa1165d_wgs_gdc_realn.bam 74503866000 BAM NA 51138aec-609f-4285-95d2-8d47f3b7b906 cd3dc6abe7a440f0d6ee338beebacfca hg38 Blood Derived Normal C3L-04410.WGS.T C3L-04410 LSCC WGS tumor CPT0284470006 CPT0284470006.WholeGenome.RP-2158.bam 23081113790 BAM NA 4ca863a2-d2c0-4a73-b135-ba3674283585 0cef71fb0108b898e07a3b44fcf1e4a7 hg19 Primary Tumor +C3L-04410.WGS.T.hg38 C3L-04410 LSCC WGS tumor CPT0284470006 32552864-05a8-479f-a894-db75882384c1_wgs_gdc_realn.bam 68395924949 BAM NA 48f97379-47bf-487c-b22a-4881b9570c1d 08354f828179e264287d7780ed8a2067 hg38 Primary Tumor C3L-04410.WXS.A C3L-04410 LSCC WXS tissue_normal CPT0284490006 CPT0284490006.WholeExome.RP-1303.bam 23739255633 BAM NA 4ebd50e7-e5a6-47d1-afec-46b8821ba6b0 d7283e9b25f3f7b09cdc10f72dfa72cc hg19 Solid Tissue Normal C3L-04410.WXS.N C3L-04410 LSCC WXS blood_normal CPT0285830002 CPT0285830002.WholeExome.RP-1303.bam 21112562710 BAM NA fc40cf54-dacf-452a-9d47-9bf283794f06 0c14ca0f16f3cb79f307af4f19fa074b hg19 Blood Derived Normal C3L-04410.WXS.T C3L-04410 LSCC WXS tumor CPT0284470006 CPT0284470006.WholeExome.RP-1303.bam 20622011364 BAM NA 3be795d8-afcf-4549-b2b7-243d1053051d 816c26ed6ca82cf2326b93a9a4a0b209 hg19 Primary Tumor @@ -13494,37 +13634,49 @@ C3L-04508.WXS.Tbm.hg38 C3L-04508 AML WXS tumor_bone_marrow CPT0260410002 fdb0ac1 C3L-04537.MethArray.Green.T C3L-04537 GBM Methylation Array tumor CPT0264330006 204367490029_R03C01_Grn.idat 13677885 IDAT Green 63333b06-e989-4723-b5bf-a3eeaa691604 463e3f424f74118223485dfe839d4792 NA Primary Tumor C3L-04537.MethArray.Red.T C3L-04537 GBM Methylation Array tumor CPT0264330006 204367490029_R03C01_Red.idat 13677885 IDAT Red 687374eb-8fe2-4377-9c33-eb11fbed82ab 6698b55000f0b861ad514dbee48e8ec8 NA Primary Tumor C3L-04537.miRNA-Seq.T C3L-04537 GBM miRNA-Seq tumor CPT0264330009 200403_UNC31-K00269_0274_AHCF7GBBXY_ATTCCT_S3_L001_R1_001.unaln.bam 160338019 BAM NA e0433688-2cf4-4012-a31c-40858a47f20c a9d726e79b842df3f130d295a107bdd5 NA Primary Tumor +C3L-04537.miRNA-Seq.T.hg38 C3L-04537 GBM miRNA-Seq tumor CPT0264330009 e2c8afe9-1334-41fe-84ea-44ffde88c54b_mirnaseq_gdc_realn.bam 175870324 BAM NA dae48e44-42b5-4715-b6cc-3bedcb382738 2e32777e3889d50fffb0062623c49eda hg38 Primary Tumor C3L-04537.RNA-Seq.R1.T C3L-04537 GBM RNA-Seq tumor CPT0264330009 200204_UNC31-K00269_0263_AHG2CJBBXY_CTTGGTAT-CCAAGTCC_S19_L005_R1_001.fastq.gz 3611841350 FASTQ NA adf59d70-7072-4025-8eba-01d2dcd6e667 9f079fe2d490cdefb9cb37efc869c0d0 NA Primary Tumor C3L-04537.RNA-Seq.R2.T C3L-04537 GBM RNA-Seq tumor CPT0264330009 200204_UNC31-K00269_0263_AHG2CJBBXY_CTTGGTAT-CCAAGTCC_S19_L005_R2_001.fastq.gz 4151095210 FASTQ NA cd035eaf-a77f-4b9b-af7d-f4c0af78fac7 af74daf39ea1442b2d6bc29a4b53813c NA Primary Tumor C3L-04537.WGS.N C3L-04537 GBM WGS blood_normal CPT0265790002 CPT0265790002.WholeGenome.RP-2158.bam 28393863499 BAM NA 4c3e04d4-4e57-430d-9ed0-3ba74a599c96 4d7648eb5647ea91c50ba4b8f8db64f6 hg19 Blood Derived Normal +C3L-04537.WGS.N.hg38 C3L-04537 GBM WGS blood_normal CPT0265790002 b2eb19a2-f110-438f-b16c-26dc0f691c14_wgs_gdc_realn.bam 84679557904 BAM NA 90c46761-ce1b-43f8-ae6a-af25020697fe a95e3329b7a11d65747272ec55ea192e hg38 Blood Derived Normal C3L-04537.WGS.T C3L-04537 GBM WGS tumor CPT0264330006 CPT0264330006.WholeGenome.RP-2158.bam 35253805632 BAM NA b7552f3d-2324-4f5d-a10d-aa1a3b3520df c92bfbb2bc6f91e49f445fd722103a15 hg19 Primary Tumor +C3L-04537.WGS.T.hg38 C3L-04537 GBM WGS tumor CPT0264330006 20533eda-81e3-40c8-842b-40b3e338127c_wgs_gdc_realn.bam 105840080534 BAM NA 14a5f061-baa1-413d-a21d-4a266877dc04 67b06b4da15fb23c1bf0c385af1a2f0f hg38 Primary Tumor C3L-04537.WXS.N C3L-04537 GBM WXS blood_normal CPT0265790002 CPT0265790002.WholeExome.RP-1303.bam 18886184900 BAM NA 084de537-e6d0-47bb-b803-18328837cf04 ad4027d5087622d5cb5de39db5b40730 hg19 Blood Derived Normal C3L-04537.WXS.T C3L-04537 GBM WXS tumor CPT0264330006 CPT0264330006.WholeExome.RP-1303.bam 16941472007 BAM NA d94de8f2-a9d7-4bcc-a5ca-7fcf6dc65790 0cb624dd9ca72d20f030f117fecd6f3c hg19 Primary Tumor C3L-04539.MethArray.Green.T C3L-04539 GBM Methylation Array tumor CPT0264350006 204372030085_R02C01_Grn.idat 13677880 IDAT Green f6094fa9-72a0-40a0-b477-635a457bd0a1 8d45a786a862677c1ba68d64ef0a678f NA Primary Tumor C3L-04539.MethArray.Red.T C3L-04539 GBM Methylation Array tumor CPT0264350006 204372030085_R02C01_Red.idat 13677880 IDAT Red 0243e79d-f860-437d-b8d3-ae877033d6a3 434542391e1717d56f9dbd89613d0408 NA Primary Tumor C3L-04539.miRNA-Seq.T C3L-04539 GBM miRNA-Seq tumor CPT0264350009 200403_UNC31-K00269_0274_AHCF7GBBXY_CAAAAG_S4_L001_R1_001.unaln.bam 175572653 BAM NA 588e9b9c-f58d-442d-8337-96f2f4a8ff5d da1711c418b4771166b969812903db74 NA Primary Tumor +C3L-04539.miRNA-Seq.T.hg38 C3L-04539 GBM miRNA-Seq tumor CPT0264350009 d7cf6ba2-3742-4f46-b660-a588eeb66304_mirnaseq_gdc_realn.bam 196058858 BAM NA 67bdfc12-9aa8-4108-ab7a-2a3baec90666 701fc9094e3355c62bcea06591320c5b hg38 Primary Tumor C3L-04539.RNA-Seq.R1.T C3L-04539 GBM RNA-Seq tumor CPT0264350009 200204_UNC31-K00269_0263_AHG2CJBBXY_TCCAACGC-TTGGACTT_S20_L005_R1_001.fastq.gz 3426488460 FASTQ NA 9b56e66a-4850-46ec-b519-5379c91aa066 e8747e07e6763ca7c23d24cd8ac16cd2 NA Primary Tumor C3L-04539.RNA-Seq.R2.T C3L-04539 GBM RNA-Seq tumor CPT0264350009 200204_UNC31-K00269_0263_AHG2CJBBXY_TCCAACGC-TTGGACTT_S20_L005_R2_001.fastq.gz 4043729957 FASTQ NA 5a856d4a-bb70-45dc-af41-53ec656ffc10 1806f53223d43577fa53667a94e8a692 NA Primary Tumor C3L-04539.WGS.N C3L-04539 GBM WGS blood_normal CPT0265800002 CPT0265800002.WholeGenome.RP-2158.bam 35537633707 BAM NA de26b2e4-b960-4ff2-bdb0-ef982fa91c77 b1bb1888ddec94689903269b8ea6d9bd hg19 Blood Derived Normal +C3L-04539.WGS.N.hg38 C3L-04539 GBM WGS blood_normal CPT0265800002 56cd7cd6-c6e0-4a44-90df-b10abcd38233_wgs_gdc_realn.bam 106937786996 BAM NA 35697bb3-4b0e-498e-86b8-045a3b37c481 ec840a40e77688a67ea020ea3280b40e hg38 Blood Derived Normal C3L-04539.WGS.T C3L-04539 GBM WGS tumor CPT0264350006 CPT0264350006.WholeGenome.RP-2158.bam 25110093183 BAM NA 9fe4e777-e8ff-4089-9f15-42ca3ac3d0e7 5c80b62b120630cc1e6f949b8891ece6 hg19 Primary Tumor +C3L-04539.WGS.T.hg38 C3L-04539 GBM WGS tumor CPT0264350006 db07518b-9ab5-4e02-b6e1-3eb0c63e8017_wgs_gdc_realn.bam 73888912902 BAM NA 340ee94a-a5d8-4417-b332-3d171f38544c 950084732e23b019fad9a7e477a07e37 hg38 Primary Tumor C3L-04539.WXS.N C3L-04539 GBM WXS blood_normal CPT0265800002 CPT0265800002.WholeExome.RP-1303.bam 22916690436 BAM NA 7ec1ce3e-b174-4d8c-b4a6-df52f55f7fbd 4267b93069c3af9e3db6f5e04763d5a6 hg19 Blood Derived Normal C3L-04539.WXS.T C3L-04539 GBM WXS tumor CPT0264350006 CPT0264350006.WholeExome.RP-1303.bam 18379018263 BAM NA c3a91aa6-8512-457b-8e07-7495071ebab8 ded3753e9ecdfa838646f0797852cf6f hg19 Primary Tumor C3L-04728.MethArray.Green.T C3L-04728 LSCC Methylation Array tumor CPT0304210006 204367490151_R05C01_Grn.idat 13677895 IDAT Green 51fca465-0585-437a-a70b-0d50796fc734 68771749b65987b647873256fb93ff3d NA Primary Tumor C3L-04728.MethArray.Red.T C3L-04728 LSCC Methylation Array tumor CPT0304210006 204367490151_R05C01_Red.idat 13677895 IDAT Red 5dde43c3-32cc-4515-b322-e3f055c045ac 13367b60ec90be4203c5cf9a9ba9c306 NA Primary Tumor C3L-04728.miRNA-Seq.T C3L-04728 LSCC miRNA-Seq tumor CPT0304210009 200224_UNC31-K00269_0267_AHC722BBXY_TAGCTT_S10_L008_R1_001.unaln.bam 223644871 BAM NA c9247f3b-2fce-49e5-9235-b17f8d74488b 2a3e59920a2721f7baba33d528ae5f8b NA Primary Tumor +C3L-04728.miRNA-Seq.T.hg38 C3L-04728 LSCC miRNA-Seq tumor CPT0304210009 d9a8f749-302b-46d9-8977-a8c1882e0abc_mirnaseq_gdc_realn.bam 247148853 BAM NA e81b44fd-5351-442b-8742-7e4b1eff7e7b f60c73fa2c3984a2c3d1d5fd74b6462a hg38 Primary Tumor C3L-04728.RNA-Seq.R1.T C3L-04728 LSCC RNA-Seq tumor CPT0304210009 200505_UNC32-K00270_0245_AHH5FVBBXY_GACCTGAA-TTGGTGAG_S10_L003_R1_001.fastq.gz 5549023600 FASTQ NA 53da8d54-81eb-4038-88b2-3196cb814a69 5f0301dca335ecbca6f6c7a81daa71b7 NA Primary Tumor C3L-04728.RNA-Seq.R2.T C3L-04728 LSCC RNA-Seq tumor CPT0304210009 200505_UNC32-K00270_0245_AHH5FVBBXY_GACCTGAA-TTGGTGAG_S10_L003_R2_001.fastq.gz 5848132575 FASTQ NA 872ca10d-39ab-43d2-a514-281d77055d1e 956bad92b3a6e4ebcf6440254973ce09 NA Primary Tumor C3L-04728.WGS.N C3L-04728 LSCC WGS blood_normal CPT0305060002 CPT0305060002.WholeGenome.RP-2158.bam 21530141327 BAM NA bb954c13-7c4d-4098-8994-fce2233295e3 48def4e16c0dc836931c639a6fd66265 hg19 Blood Derived Normal +C3L-04728.WGS.N.hg38 C3L-04728 LSCC WGS blood_normal CPT0305060002 89c144d0-e672-49fe-aa42-b3f957230089_wgs_gdc_realn.bam 63433937050 BAM NA 6fb14feb-df82-4a97-aa74-fd1c460c89c2 b219d61cb468c2b87c76abfb2a678deb hg38 Blood Derived Normal C3L-04728.WGS.T C3L-04728 LSCC WGS tumor CPT0304210006 CPT0304210006.WholeGenome.RP-2158.bam 25053735048 BAM NA b507c8f9-863c-470e-a8e8-b3b1743a13e0 6ad557444509bbf7e04befa26e8c37c1 hg19 Primary Tumor +C3L-04728.WGS.T.hg38 C3L-04728 LSCC WGS tumor CPT0304210006 774eea8f-1aca-4b74-b987-b20e71621cda_wgs_gdc_realn.bam 72794626135 BAM NA 28d030b8-d65f-4e55-be7b-cf10aafbd54b 943c11f56310c3e8234c0afaa08a74ee hg38 Primary Tumor C3L-04728.WXS.N C3L-04728 LSCC WXS blood_normal CPT0305060002 CPT0305060002.WholeExome.RP-1303.bam 22684834998 BAM NA 3441574b-3e9f-46ee-a40b-cddab978e1ce 02193c594900fedb42d6e9e51f873495 hg19 Blood Derived Normal C3L-04728.WXS.T C3L-04728 LSCC WXS tumor CPT0304210006 CPT0304210006.WholeExome.RP-1303.bam 23402829524 BAM NA 777a095c-7981-4141-82d7-c2282900d6ac 32546cf79f5419c8f68e42a7e52fd41c hg19 Primary Tumor C3L-04731.MethArray.Green.T C3L-04731 GBM Methylation Array tumor CPT0258360006 204372030072_R03C01_Grn.idat 13677880 IDAT Green 1b3b805a-00cf-4ec5-ad0d-651d2012513f 4c8dbd7b08ea2fe314d6cb3999ced24d NA Primary Tumor C3L-04731.MethArray.Red.T C3L-04731 GBM Methylation Array tumor CPT0258360006 204372030072_R03C01_Red.idat 13677880 IDAT Red 1455c5d3-26c7-4671-b7ca-7946ec497ba0 3858f73ac87d4249f225c9a376600bf4 NA Primary Tumor C3L-04731.miRNA-Seq.T C3L-04731 GBM miRNA-Seq tumor CPT0258360009 200403_UNC31-K00269_0274_AHCF7GBBXY_ATGAGC_S2_L001_R1_001.unaln.bam 163649841 BAM NA 7d68a4a1-186b-45cf-9842-1b93139f81aa 0e2fc6c3fc3d5e14cfe8ae54f9e7fe84 NA Primary Tumor +C3L-04731.miRNA-Seq.T.hg38 C3L-04731 GBM miRNA-Seq tumor CPT0258360009 27acded0-fbca-4101-ad20-cbb61017cb78_mirnaseq_gdc_realn.bam 178901159 BAM NA 433f9cf1-b2ca-4468-8451-e0f3a6c74297 e6d4007dc049a2c716e7f3001299f31a hg38 Primary Tumor C3L-04731.RNA-Seq.R1.T C3L-04731 GBM RNA-Seq tumor CPT0258360009 200204_UNC31-K00269_0263_AHG2CJBBXY_GTCGGAGC-GGTTATAA_S18_L005_R1_001.fastq.gz 2915649612 FASTQ NA fdcc07bb-3566-4ad0-b8af-832168038559 4a4e55f1119aa6ebdf20db0942ff41d1 NA Primary Tumor C3L-04731.RNA-Seq.R2.T C3L-04731 GBM RNA-Seq tumor CPT0258360009 200204_UNC31-K00269_0263_AHG2CJBBXY_GTCGGAGC-GGTTATAA_S18_L005_R2_001.fastq.gz 3439998432 FASTQ NA d82e8a6e-aaca-4d9d-b26e-96046b568d10 41c80d9f58067ca57ae52b5923be8f69 NA Primary Tumor C3L-04731.WGS.N C3L-04731 GBM WGS blood_normal CPT0258420002 CPT0258420002.WholeGenome.RP-2158.bam 24023306337 BAM NA 5bf7f78d-ac65-472b-b155-cc53b9de62b7 315efec8e111c62279fb3a5a9805ee87 hg19 Blood Derived Normal +C3L-04731.WGS.N.hg38 C3L-04731 GBM WGS blood_normal CPT0258420002 580da526-9175-4120-8b85-febc8c389b31_wgs_gdc_realn.bam 72428099741 BAM NA d1a5f165-da82-4896-bd87-83d56f133baa a39015e0c347b175963ea7c94b769014 hg38 Blood Derived Normal C3L-04731.WGS.T C3L-04731 GBM WGS tumor CPT0258360006 CPT0258360006.WholeGenome.RP-2158.bam 25501382330 BAM NA c18a3425-ebed-4e66-8bab-35f8bf4fcb29 a934642f7b3abef9bea83e736e18c9a4 hg19 Primary Tumor +C3L-04731.WGS.T.hg38 C3L-04731 GBM WGS tumor CPT0258360006 b277e95a-5dd6-4438-b9ab-b06f7abbb5ca_wgs_gdc_realn.bam 73442457570 BAM NA 487eb7fd-571b-4593-b357-bbb90037e3c8 54b3eb6740dd4bd8bdbd30b1780b5206 hg38 Primary Tumor C3L-04731.WXS.N C3L-04731 GBM WXS blood_normal CPT0258420002 CPT0258420002.WholeExome.RP-1303.bam 35813867996 BAM NA 42c91ebd-2a1f-4930-8383-b5e60d40a502 4ad2113cec871e682249d9837ed20d3d hg19 Blood Derived Normal C3L-04731.WXS.T C3L-04731 GBM WXS tumor CPT0258360006 CPT0258360006.WholeExome.RP-1303.bam 19673439486 BAM NA c4fe1c9a-c8ad-4d80-9f4e-f046c886dae5 a8efa9dbb7abd3bed9213d43d614688d hg19 Primary Tumor C3L-04746.MethArray.Green.A C3L-04746 LSCC Methylation Array tissue_normal CPT0279080006 204372030024_R04C01_Grn.idat 13677905 IDAT Green a8825ca1-fb1e-48ec-9cd6-2131c70996c8 753dbabbaa9d60d63aebd8ccce6aa33b NA Solid Tissue Normal @@ -13532,26 +13684,36 @@ C3L-04746.MethArray.Green.T C3L-04746 LSCC Methylation Array tumor CPT0279010009 C3L-04746.MethArray.Red.A C3L-04746 LSCC Methylation Array tissue_normal CPT0279080006 204372030024_R04C01_Red.idat 13677905 IDAT Red 3d44d3ca-ee6c-4bf4-965c-55ef379be7bf 3ba3ce1714c3c3c4b2d1d744b9328d22 NA Solid Tissue Normal C3L-04746.MethArray.Red.T C3L-04746 LSCC Methylation Array tumor CPT0279010009 204367490048_R06C01_Red.idat 13677885 IDAT Red 3087468d-7579-490d-b0fb-d355c044b4f3 09b610eee6ce34ec37dfcf4fdaeff7eb NA Primary Tumor C3L-04746.miRNA-Seq.A C3L-04746 LSCC miRNA-Seq tissue_normal CPT0279080009 200513_UNC31-K00269_0278_BHH7Y7BBXY_ATGTCA_S6_L005_R1_001.unaln.bam 222072342 BAM NA f9744b29-8882-4352-9ee4-409ef121a349 257767c2532bd0b807378c733038ef0e NA Solid Tissue Normal +C3L-04746.miRNA-Seq.A.hg38 C3L-04746 LSCC miRNA-Seq tissue_normal CPT0279080009 6a3d9456-8cc8-46ec-8c08-ffe28b3a39e3_mirnaseq_gdc_realn.bam 245529205 BAM NA 83191fc9-e0ab-48aa-8d4b-e1e311434ab5 4cbcdc92d54705747b805bc836daa69e hg38 Solid Tissue Normal C3L-04746.miRNA-Seq.T C3L-04746 LSCC miRNA-Seq tumor CPT0279010013 200513_UNC31-K00269_0278_BHH7Y7BBXY_GAGTGG_S12_L007_R1_001.unaln.bam 267646206 BAM NA 1be13f42-714e-4730-9c70-be63f4571026 849a0e88d6ff71e26fc868eec32c115f NA Primary Tumor +C3L-04746.miRNA-Seq.T.hg38 C3L-04746 LSCC miRNA-Seq tumor CPT0279010013 0b3b1933-2420-4ccd-82be-63b558395913_mirnaseq_gdc_realn.bam 288594484 BAM NA 96f481f5-3a99-49d9-98f3-cb4ada66922f f20249de167096fb3443a02a6db0548d hg38 Primary Tumor C3L-04746.RNA-Seq.R1.A C3L-04746 LSCC RNA-Seq tissue_normal CPT0279080009 200505_UNC32-K00270_0245_AHH5FVBBXY_GGCTTAAG-TCGTGACC_S15_L008_R1_001.fastq.gz 3452803753 FASTQ NA 6fa7166d-8384-4103-8c9f-7f5088af16d5 f07c3f9a69e4083604b46d799458429a NA Solid Tissue Normal C3L-04746.RNA-Seq.R1.T C3L-04746 LSCC RNA-Seq tumor CPT0279010013 200505_UNC31-K00269_0277_AHGFKNBBXY_ACTCGTGT-ATTGGAAC_S21_L006_R1_001.fastq.gz 3686471434 FASTQ NA eff0d265-610e-4573-9937-6ce7611a7551 2900520527d13c4caac9b336bc82d88d NA Primary Tumor C3L-04746.RNA-Seq.R2.A C3L-04746 LSCC RNA-Seq tissue_normal CPT0279080009 200505_UNC32-K00270_0245_AHH5FVBBXY_GGCTTAAG-TCGTGACC_S15_L008_R2_001.fastq.gz 3854339961 FASTQ NA 65c5378d-ec10-4518-9bf3-f9c9ae0d0e1a 9fac4559a53bbddee125489b7ea44b72 NA Solid Tissue Normal C3L-04746.RNA-Seq.R2.T C3L-04746 LSCC RNA-Seq tumor CPT0279010013 200505_UNC31-K00269_0277_AHGFKNBBXY_ACTCGTGT-ATTGGAAC_S21_L006_R2_001.fastq.gz 4157452037 FASTQ NA e75763ef-0566-46a9-853e-347fcd83ee41 c8203ec697ed4da5ea77aed4097d4e10 NA Primary Tumor C3L-04746.WGS.N C3L-04746 LSCC WGS blood_normal CPT0279170002 CPT0279170002.WholeGenome.RP-2158.bam 20565972778 BAM NA 9853ceef-16c7-48d8-975d-ba1c0dfa6173 28d3948dc0eeab605340f3d40ed052e0 hg19 Blood Derived Normal +C3L-04746.WGS.N.hg38 C3L-04746 LSCC WGS blood_normal CPT0279170002 5f8cfa01-07c2-4f48-ab0e-31ff66be67df_wgs_gdc_realn.bam 59978343142 BAM NA 0935491d-6a06-4602-977e-871773b588a6 460c2d0042d4a0294c7cae372c934086 hg38 Blood Derived Normal C3L-04746.WGS.T C3L-04746 LSCC WGS tumor CPT0279010009 CPT0279010009.WholeGenome.RP-2158.bam 23826429502 BAM NA b73d223c-517b-41cf-967a-355c01181b38 b6f9b60aa0b0011162cd21f8c44bacbc hg19 Primary Tumor +C3L-04746.WGS.T.hg38 C3L-04746 LSCC WGS tumor CPT0279010009 7c5f9092-ce2b-4a59-b8ed-f368774e6764_wgs_gdc_realn.bam 69496730556 BAM NA 801599dd-861c-45b1-8b8a-0796ff39e9a6 489d6720d1608cedda26ce15232a8e26 hg38 Primary Tumor +C3L-04746.WXS.A C3L-04746 LSCC WXS tissue_normal CPT0279080006 CPT0279080006.WholeExome.RP-1303.bam 38232874629 BAM NA bc5ae5ab-585e-4b9c-99cb-75a01cabccd7 f0fcf86d249ef01c77425f34ca3a847e hg19 Solid Tissue Normal C3L-04746.WXS.N C3L-04746 LSCC WXS blood_normal CPT0279170002 CPT0279170002.WholeExome.RP-1303.bam 21342680481 BAM NA df436629-2d6d-4892-9a03-d356f72c7981 fdacaf7a3b698a1c86f6a42ebfa55d38 hg19 Blood Derived Normal +C3L-04746.WXS.T C3L-04746 LSCC WXS tumor CPT0279010009 CPT0279010009.WholeExome.RP-1303.bam 41988640464 BAM NA caa38563-2ef8-42ee-9b55-dc3c03bf70fd 1a569113609ec9b6052de12b8ec233df hg19 Primary Tumor C3L-04749.MethArray.Green.A C3L-04749 LSCC Methylation Array tissue_normal CPT0271400009 204367400087_R08C01_Grn.idat 13677880 IDAT Green 425241c0-9d51-4160-8ef9-a6a1d44aa1c2 4b6c16046d9e8bdc15c3270ccd330b44 NA Solid Tissue Normal C3L-04749.MethArray.Green.T C3L-04749 LSCC Methylation Array tumor CPT0271380006 204372030076_R06C01_Grn.idat 13677890 IDAT Green 13b928b8-5120-4186-a8e4-12e1e8449082 22cdb99b9e12a201a7a460e2769bfc0c NA Primary Tumor C3L-04749.MethArray.Red.A C3L-04749 LSCC Methylation Array tissue_normal CPT0271400009 204367400087_R08C01_Red.idat 13677880 IDAT Red 0272218e-56be-4985-b142-1da901f9a7c0 495181bf6d6d4a325d900136955d32e7 NA Solid Tissue Normal C3L-04749.MethArray.Red.T C3L-04749 LSCC Methylation Array tumor CPT0271380006 204372030076_R06C01_Red.idat 13677890 IDAT Red 7a2254ac-9b47-4885-8ce2-183c66406f43 91464d23f9a886b3897dbc2c9c2f4a08 NA Primary Tumor C3L-04749.miRNA-Seq.A C3L-04749 LSCC miRNA-Seq tissue_normal CPT0271400006 200513_UNC31-K00269_0278_BHH7Y7BBXY_TACAGC_S43_L006_R1_001.unaln.bam 247431497 BAM NA b9e6c4a0-972a-4d3d-b390-2692804e0e77 e4383580ff26c10af5093003759b1db4 NA Solid Tissue Normal +C3L-04749.miRNA-Seq.A.hg38 C3L-04749 LSCC miRNA-Seq tissue_normal CPT0271400006 78b78ca1-df48-4b52-86eb-0a8170d61777_mirnaseq_gdc_realn.bam 275286965 BAM NA 697363af-0a8e-4935-be12-c3f47f459cf4 874b149999e818c9c54d2970ee286ca0 hg38 Solid Tissue Normal C3L-04749.miRNA-Seq.T C3L-04749 LSCC miRNA-Seq tumor CPT0271380009 200224_UNC31-K00269_0267_AHC722BBXY_GTAGAG_S17_L006_R1_001.unaln.bam 181009156 BAM NA ec01ccc8-8b6b-4bc6-abdc-3e7413c63fb8 346205a506d73732d44227dd057e7fa6 NA Primary Tumor +C3L-04749.miRNA-Seq.T.hg38 C3L-04749 LSCC miRNA-Seq tumor CPT0271380009 784f5baf-ffdb-4e82-a17e-c00621ec0944_mirnaseq_gdc_realn.bam 200820385 BAM NA 965c0262-f225-4fa1-a1e7-6544b0abe5f6 b5cb21595c7273105cd5bf23cdc1f1ae hg38 Primary Tumor C3L-04749.RNA-Seq.R1.A C3L-04749 LSCC RNA-Seq tissue_normal CPT0271400006 200505_UNC32-K00270_0246_BHH5F5BBXY_AAGATACT-ACTTACAT_S25_L007_R1_001.fastq.gz 3309872976 FASTQ NA d1935c39-b390-43d3-87d4-1fd3e222096c 5cab4015e3ecb50e3d0484e43dd9e6cf NA Solid Tissue Normal C3L-04749.RNA-Seq.R1.T C3L-04749 LSCC RNA-Seq tumor CPT0271380009 200428_UNC31-K00269_0275_AHGCJVBBXY_ACACTAAG-ATCCATAT_S1_L001_R1_001.fastq.gz 3912060536 FASTQ NA 9851d22e-75a3-4685-92f4-fceddb612a0c 956466fec5e50287c68ea89e64d26ef0 NA Primary Tumor C3L-04749.RNA-Seq.R2.A C3L-04749 LSCC RNA-Seq tissue_normal CPT0271400006 200505_UNC32-K00270_0246_BHH5F5BBXY_AAGATACT-ACTTACAT_S25_L007_R2_001.fastq.gz 3968764367 FASTQ NA c4da1660-db14-4679-955a-499096ee0978 21fb919bff4847231f9579f8d7fcd809 NA Solid Tissue Normal C3L-04749.RNA-Seq.R2.T C3L-04749 LSCC RNA-Seq tumor CPT0271380009 200428_UNC31-K00269_0275_AHGCJVBBXY_ACACTAAG-ATCCATAT_S1_L001_R2_001.fastq.gz 4338079910 FASTQ NA 1e23a930-3a62-4de6-ac26-2d39621847ec 32ffd599c14cd6676bc42c81f40ff12b NA Primary Tumor C3L-04749.WGS.N C3L-04749 LSCC WGS blood_normal CPT0271470002 CPT0271470002.WholeGenome.RP-2158.bam 24821097773 BAM NA d9735d16-e7c4-4090-9ca7-8ccf3a1a9901 b9b17b42ee90d01c1b4703e4aec23283 hg19 Blood Derived Normal +C3L-04749.WGS.N.hg38 C3L-04749 LSCC WGS blood_normal CPT0271470002 537b8662-9f16-462d-85f1-2517912d16f0_wgs_gdc_realn.bam 75596498859 BAM NA 948bad93-2b50-452c-bc20-fbaf4d175be2 96b49d70a9a93a1b53ddd87ee4a8e4e3 hg38 Blood Derived Normal C3L-04749.WGS.T C3L-04749 LSCC WGS tumor CPT0271380006 CPT0271380006.WholeGenome.RP-2158.bam 23997719812 BAM NA 24b1eb69-3e2f-49b0-82a4-354e03aa9ecb f343e6b2c044f4a144582108343a20ad hg19 Primary Tumor +C3L-04749.WGS.T.hg38 C3L-04749 LSCC WGS tumor CPT0271380006 05c2e83b-4061-4cbe-825f-2fb99b325dae_wgs_gdc_realn.bam 70736499492 BAM NA f13d050a-7955-4d6f-82ad-81b11335cdb9 5ee249674e2b064033f2baec3d8981fa hg38 Primary Tumor C3L-04749.WXS.A C3L-04749 LSCC WXS tissue_normal CPT0271400009 CPT0271400009.WholeExome.RP-1303.bam 23166405711 BAM NA deea33fc-fc78-4f86-a950-cb4ee5bc8c79 39d31ef256dccad29d47e873bc308c37 hg19 Solid Tissue Normal C3L-04749.WXS.N C3L-04749 LSCC WXS blood_normal CPT0271470002 CPT0271470002.WholeExome.RP-1303.bam 29988252705 BAM NA c5699ea9-1ea8-411d-be94-5f3caf7ff7cc b9572ba0e171575c31a4c6c44a1f663e hg19 Blood Derived Normal C3L-04749.WXS.T C3L-04749 LSCC WXS tumor CPT0271380006 CPT0271380006.WholeExome.RP-1303.bam 22618528518 BAM NA 6fcafbb7-a541-42be-8a6f-f0a3bccea7ad 75df575a838237273a28a313f87fce17 hg19 Primary Tumor @@ -13663,13 +13825,17 @@ C3L-04786.MethArray.Green.T C3L-04786 LSCC Methylation Array tumor CPT0279210009 C3L-04786.MethArray.Red.A C3L-04786 LSCC Methylation Array tissue_normal CPT0279230006 204372030014_R04C01_Red.idat 13677895 IDAT Red 07ec162d-221e-4002-b74a-0d3956e486f6 1fbd4ac949492b9d63d3fdec39abef6a NA Solid Tissue Normal C3L-04786.MethArray.Red.T C3L-04786 LSCC Methylation Array tumor CPT0279210009 204372030074_R06C01_Red.idat 13677880 IDAT Red aca1eced-0072-402b-8cc4-1cf1f2ff0c07 9a87924c2f55808e768f83fe27eeec8d NA Primary Tumor C3L-04786.miRNA-Seq.A C3L-04786 LSCC miRNA-Seq tissue_normal CPT0279230009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CCGTCC_S8_L005_R1_001.unaln.bam 218944913 BAM NA d98ab33c-9ebe-439e-8917-3c24be963558 2a3eb449ad0dd7f1003033516ef06c4d NA Solid Tissue Normal +C3L-04786.miRNA-Seq.A.hg38 C3L-04786 LSCC miRNA-Seq tissue_normal CPT0279230009 82151494-6c74-4cf5-a5a4-e3f63aa26ade_mirnaseq_gdc_realn.bam 239860815 BAM NA 14f752b3-6fed-4a9a-bf31-17c1db27b946 306d95260198555c91946a8cd86bfb04 hg38 Solid Tissue Normal C3L-04786.miRNA-Seq.T C3L-04786 LSCC miRNA-Seq tumor CPT0279210006 200224_UNC31-K00269_0267_AHC722BBXY_ACAGTG_S5_L006_R1_001.unaln.bam 220604822 BAM NA 4ffb68ad-9423-4c16-bba5-57835f450f4c 606cd844ddbdb598eeb1279313f14c9f NA Primary Tumor +C3L-04786.miRNA-Seq.T.hg38 C3L-04786 LSCC miRNA-Seq tumor CPT0279210006 4dd0d1b1-8b7d-4fc2-babd-f0f5bef45acb_mirnaseq_gdc_realn.bam 239848891 BAM NA 11669fc5-9f8b-4509-968a-91499610e459 91369f0d04b12db11c1c4e839d0b5ba2 hg38 Primary Tumor C3L-04786.RNA-Seq.R1.A C3L-04786 LSCC RNA-Seq tissue_normal CPT0279230009 200505_UNC32-K00270_0245_AHH5FVBBXY_AATCCGGA-CTACAGTT_S16_L008_R1_001.fastq.gz 4036325353 FASTQ NA cfc89afe-5f55-471c-8103-5252a5b696d1 0b6075d2b94704c081d6ea364a287895 NA Solid Tissue Normal C3L-04786.RNA-Seq.R1.T C3L-04786 LSCC RNA-Seq tumor CPT0279210006 200428_UNC32-K00270_0243_AHG3Y3BBXY_CAACAATG-CTTCACGG_S21_L006_R1_001.fastq.gz 3479865010 FASTQ NA 9ade8c4c-e0cb-4b9d-94e3-9221a03c8db9 6a3d6460676e09a8104454cd9707c1d2 NA Primary Tumor C3L-04786.RNA-Seq.R2.A C3L-04786 LSCC RNA-Seq tissue_normal CPT0279230009 200505_UNC32-K00270_0245_AHH5FVBBXY_AATCCGGA-CTACAGTT_S16_L008_R2_001.fastq.gz 4641465944 FASTQ NA a0b1ffc3-b500-4406-878d-aed70e0fe282 59c79332917d3eff2985aa0b2ef2a25c NA Solid Tissue Normal C3L-04786.RNA-Seq.R2.T C3L-04786 LSCC RNA-Seq tumor CPT0279210006 200428_UNC32-K00270_0243_AHG3Y3BBXY_CAACAATG-CTTCACGG_S21_L006_R2_001.fastq.gz 3690346414 FASTQ NA c35d2ca2-c670-4e53-abbc-ac7af4607258 9bc3f15b4d6d7d5ee85f575b4027fbac NA Primary Tumor C3L-04786.WGS.N C3L-04786 LSCC WGS blood_normal CPT0279350002 CPT0279350002.WholeGenome.RP-2158.bam 23865826101 BAM NA 54e4018b-b8d0-4519-ae9c-1939ee18b691 2dc447415a286c4645efac6de490013d hg19 Blood Derived Normal +C3L-04786.WGS.N.hg38 C3L-04786 LSCC WGS blood_normal CPT0279350002 d62e1c11-deb1-4bf9-acad-17ddda7c89b0_wgs_gdc_realn.bam 68224029568 BAM NA 75496f29-8401-4131-b320-d16cced4737b 4dd71dcf688e4d95cf1900152c54c063 hg38 Blood Derived Normal C3L-04786.WGS.T C3L-04786 LSCC WGS tumor CPT0279210009 CPT0279210009.WholeGenome.RP-2158.bam 25897885118 BAM NA 060f78df-6fe1-4633-89a2-4a97d53c48c1 2d19430da77d229a99dfcea81babd553 hg19 Primary Tumor +C3L-04786.WGS.T.hg38 C3L-04786 LSCC WGS tumor CPT0279210009 3feebd7d-0450-44eb-9c19-f112017bcf12_wgs_gdc_realn.bam 77604190824 BAM NA 6c11187b-9320-49ed-838d-692f239d9451 4e32f0d821faa7526e0389b63b42a777 hg38 Primary Tumor C3L-04786.WXS.A C3L-04786 LSCC WXS tissue_normal CPT0279230006 CPT0279230006.WholeExome.RP-1303.bam 28397456283 BAM NA 2dbe4211-9f6e-45ec-9e29-089e98f6d627 a1dbf07ed018eaac782742edddbd2598 hg19 Solid Tissue Normal C3L-04786.WXS.N C3L-04786 LSCC WXS blood_normal CPT0279350002 CPT0279350002.WholeExome.RP-1303.bam 22100950025 BAM NA ea4f14d6-73e9-4f16-816e-787f9b50ee09 3ade6b6ce3b6a6c3d64c853fb5c8ce6a hg19 Blood Derived Normal C3L-04786.WXS.T C3L-04786 LSCC WXS tumor CPT0279210009 CPT0279210009.WholeExome.RP-1303.bam 19018558188 BAM NA 0bcc5c8f-1ac0-498c-af74-487a33625516 b3d82b85f96f75bfd4ab5daf730c4c69 hg19 Primary Tumor @@ -13702,21 +13868,28 @@ C3L-04792.MethArray.Green.T C3L-04792 LSCC Methylation Array tumor CPT0297650006 C3L-04792.MethArray.Red.A C3L-04792 LSCC Methylation Array tissue_normal CPT0297670006 204372030072_R07C01_Red.idat 13677880 IDAT Red c04eddb8-fc10-496e-936c-59059d64a669 f76cb61dd5023f6208bfb829e35958f7 NA Solid Tissue Normal C3L-04792.MethArray.Red.T C3L-04792 LSCC Methylation Array tumor CPT0297650006 204372030071_R08C01_Red.idat 13677890 IDAT Red 5c20cb62-ca4f-4e38-9095-8a8d8fc213d4 a985594101db5cb7d00ef92dad0803df NA Primary Tumor C3L-04792.miRNA-Seq.A C3L-04792 LSCC miRNA-Seq tissue_normal CPT0297670009 200513_UNC31-K00269_0278_BHH7Y7BBXY_GTTTCG_S21_L005_R1_001.unaln.bam 191736809 BAM NA 23e0d790-2403-481e-8b94-d6ce0bc0b5eb f8fdbc4df055f656793f09365c2ba525 NA Solid Tissue Normal +C3L-04792.miRNA-Seq.A.hg38 C3L-04792 LSCC miRNA-Seq tissue_normal CPT0297670009 330774a2-ceef-4359-ab92-a28c80cbb747_mirnaseq_gdc_realn.bam 209889955 BAM NA 05c3435c-9a98-4bf8-bcd3-9c0ddbad9202 4ec9a9f4721d08792f76b08a0446b824 hg38 Solid Tissue Normal C3L-04792.miRNA-Seq.T C3L-04792 LSCC miRNA-Seq tumor CPT0297650009 200224_UNC31-K00269_0267_AHC722BBXY_TCGAAG_S47_L007_R1_001.unaln.bam 213001197 BAM NA c0b9bd53-207c-4bda-a6cf-4eb9be9a5884 1c2750c9c1d026ced71e21d7ecd2cb9a NA Primary Tumor +C3L-04792.miRNA-Seq.T.hg38 C3L-04792 LSCC miRNA-Seq tumor CPT0297650009 0dc29a88-6a9d-4b0e-b7b4-1c97fefeb75e_mirnaseq_gdc_realn.bam 238310191 BAM NA 0a9ab958-458c-457b-8a24-ca733ea48d56 cdcf52efdb8b19294891773dc07ee25b hg38 Primary Tumor C3L-04792.RNA-Seq.R1.A C3L-04792 LSCC RNA-Seq tissue_normal CPT0297670009 200505_UNC32-K00270_0246_BHH5F5BBXY_GGTACCTT-AAGACGTC_S8_L002_R1_001.fastq.gz 3853211006 FASTQ NA 2998a5d3-97aa-432a-9be0-36e6b7a46c38 32b1d56e26606a1a4a6f454222d0ac44 NA Solid Tissue Normal C3L-04792.RNA-Seq.R1.T C3L-04792 LSCC RNA-Seq tumor CPT0297650009 200428_UNC32-K00270_0243_AHG3Y3BBXY_GTTCCAAT-AATTCTGC_S15_L004_R1_001.fastq.gz 4296198891 FASTQ NA 1234511d-d6ff-4799-93cb-ee93a0424bf6 1b30c01af76db7d23ae09ea13bc49b2f NA Primary Tumor C3L-04792.RNA-Seq.R2.A C3L-04792 LSCC RNA-Seq tissue_normal CPT0297670009 200505_UNC32-K00270_0246_BHH5F5BBXY_GGTACCTT-AAGACGTC_S8_L002_R2_001.fastq.gz 4587257386 FASTQ NA 52ab69d3-4ae5-4074-866c-cef78151abaf 08f7a1182c30478d2a2d1e5023d5b228 NA Solid Tissue Normal C3L-04792.RNA-Seq.R2.T C3L-04792 LSCC RNA-Seq tumor CPT0297650009 200428_UNC32-K00270_0243_AHG3Y3BBXY_GTTCCAAT-AATTCTGC_S15_L004_R2_001.fastq.gz 4594352733 FASTQ NA d542e6b6-4511-4dcf-a6c2-33b1adab5f18 212b751a4d0f7104737710dc151a7099 NA Primary Tumor C3L-04792.WGS.N C3L-04792 LSCC WGS blood_normal CPT0297780002 CPT0297780002.WholeGenome.RP-2158.bam 25245438802 BAM NA 2826d306-3653-4d2f-80e3-3544fd6f8fb0 06204361571e2f0495dde1605a1c2ec1 hg19 Blood Derived Normal +C3L-04792.WGS.N.hg38 C3L-04792 LSCC WGS blood_normal CPT0297780002 d58e9015-53d6-4a74-b3dc-55c27acd8016_wgs_gdc_realn.bam 73153320417 BAM NA 2e6c3df5-9ace-47df-ad27-5c5c1ccf902c 7a774c32cd5676792798ae2fb614c84f hg38 Blood Derived Normal C3L-04792.WGS.T C3L-04792 LSCC WGS tumor CPT0297650006 CPT0297650006.WholeGenome.RP-2158.bam 27485373003 BAM NA ed9627aa-97e9-4b49-850a-100f7a771bc8 0b295e25a1012e97f32876d9e154e452 hg19 Primary Tumor +C3L-04792.WGS.T.hg38 C3L-04792 LSCC WGS tumor CPT0297650006 d283d472-cff8-47b2-835d-2888bf62bb3c_wgs_gdc_realn.bam 80550743528 BAM NA e4ba2471-cdc0-4ac0-ad6c-d63174dfa996 4cc5a89932886503174c3aa1a2d9b634 hg38 Primary Tumor C3L-04792.WXS.A C3L-04792 LSCC WXS tissue_normal CPT0297670006 CPT0297670006.WholeExome.RP-1303.bam 25422919637 BAM NA d822892f-0577-4c64-aaf1-07ead8360961 04e338ddd301709e8bd2bd4db30875ef hg19 Solid Tissue Normal C3L-04792.WXS.N C3L-04792 LSCC WXS blood_normal CPT0297780002 CPT0297780002.WholeExome.RP-1303.bam 28125500809 BAM NA c9515713-ecf2-4947-9b46-41360ca878b8 a0d0cf3e38aaa439b44ea3cc8d397a4c hg19 Blood Derived Normal C3L-04792.WXS.T C3L-04792 LSCC WXS tumor CPT0297650006 CPT0297650006.WholeExome.RP-1303.bam 26505754048 BAM NA 64477b16-df7a-4c73-8782-3510ec7b2afd 71be52ab371efc2dda8ac619efbe4c66 hg19 Primary Tumor C3L-04795.miRNA-Seq.T C3L-04795 GBM miRNA-Seq tumor CPT0257640009 200403_UNC31-K00269_0274_AHCF7GBBXY_ACTGAT_S1_L001_R1_001.unaln.bam 298863378 BAM NA 64cf5a0d-50c0-49b4-8ff4-a220d43ad1b2 1a4f200a83c0082d1053f6bb314dbbd7 NA Primary Tumor +C3L-04795.miRNA-Seq.T.hg38 C3L-04795 GBM miRNA-Seq tumor CPT0257640009 f44042cb-e293-4f34-884d-4ed796d4d746_mirnaseq_gdc_realn.bam 335243543 BAM NA 38edfdd0-d6e2-4227-9e62-42dd598e4e88 c5f46d7c55f022e6817e2f27082cdbc0 hg38 Primary Tumor C3L-04795.RNA-Seq.R1.T C3L-04795 GBM RNA-Seq tumor CPT0257640009 200204_UNC31-K00269_0263_AHG2CJBBXY_ACTAAGAT-AACCGCGG_S17_L005_R1_001.fastq.gz 3633010663 FASTQ NA 0ff10436-30c0-4571-a5f1-db72929506b8 688c644298eb23aa2d7c31f5bb943c2e NA Primary Tumor C3L-04795.RNA-Seq.R2.T C3L-04795 GBM RNA-Seq tumor CPT0257640009 200204_UNC31-K00269_0263_AHG2CJBBXY_ACTAAGAT-AACCGCGG_S17_L005_R2_001.fastq.gz 4117685899 FASTQ NA d3c4c707-2ecb-44db-9c2b-04a6f624d67f f560ddfe6756b0bb5baf8ac6ebc3a8c1 NA Primary Tumor C3L-04795.WGS.N C3L-04795 GBM WGS blood_normal CPT0257730002 CPT0257730002.WholeGenome.RP-2158.bam 21078681011 BAM NA d5594591-b0be-46d5-a50b-687a1116392c 995ab0767e58ee7fe1efedad6e9d3530 hg19 Blood Derived Normal +C3L-04795.WGS.N.hg38 C3L-04795 GBM WGS blood_normal CPT0257730002 66331f85-ba28-4eb8-9df1-60a3cd38d91a_wgs_gdc_realn.bam 59840869093 BAM NA f2cabdf1-f980-49c4-b2bf-e877bcd84a37 3bcb06c175b4d94e65cc21b849bcda1c hg38 Blood Derived Normal C3L-04795.WGS.T C3L-04795 GBM WGS tumor CPT0257640006 CPT0257640006.WholeGenome.RP-2158.bam 29876299653 BAM NA a47b409b-7dcf-4b2a-b0b0-d101f0883464 3f5e62ccaa486489891ddae53f0bb3e6 hg19 Primary Tumor +C3L-04795.WGS.T.hg38 C3L-04795 GBM WGS tumor CPT0257640006 376e0e57-4948-421b-a670-e310f4072910_wgs_gdc_realn.bam 88596718616 BAM NA 10d0d280-5380-4979-84b9-54470cf8aae8 cc656015ce0b9c9670cc4a69a4a5c834 hg38 Primary Tumor C3L-04795.WXS.N C3L-04795 GBM WXS blood_normal CPT0257730002 CPT0257730002.WholeExome.RP-1303.bam 28990985033 BAM NA 26d444b9-7835-4344-9f0c-2ad18b4c93e1 6cc6a42a07ff29b5a93c444f39489a01 hg19 Blood Derived Normal C3L-04795.WXS.T C3L-04795 GBM WXS tumor CPT0257640006 CPT0257640006.WholeExome.RP-1303.bam 22044187706 BAM NA 1b0cbbdb-5519-478f-8a0d-0ae8ed08c3d2 2a15cfe91c9120ba7e86e137d67f1763 hg19 Primary Tumor C3L-04804.MethArray.Green.A C3L-04804 LSCC Methylation Array tissue_normal CPT0271710009 204372030127_R08C01_Grn.idat 13677880 IDAT Green 2b9765b2-5c7f-4926-a80a-54bc5a8d1361 46870db7120c75ab194b79d04f735f63 NA Solid Tissue Normal @@ -13724,13 +13897,17 @@ C3L-04804.MethArray.Green.T C3L-04804 LSCC Methylation Array tumor CPT0271660006 C3L-04804.MethArray.Red.A C3L-04804 LSCC Methylation Array tissue_normal CPT0271710009 204372030127_R08C01_Red.idat 13677880 IDAT Red 163fa391-0bc9-4497-9387-66ba09a75a8d b89d93f099954e60268c4060f64705e1 NA Solid Tissue Normal C3L-04804.MethArray.Red.T C3L-04804 LSCC Methylation Array tumor CPT0271660006 204367490057_R03C01_Red.idat 13677905 IDAT Red 0d454711-f07b-4877-89d3-0c285bf2803e 2cb6d091c9be8d4cd89e6b56383c88c8 NA Primary Tumor C3L-04804.miRNA-Seq.A C3L-04804 LSCC miRNA-Seq tissue_normal CPT0271710006 200513_UNC31-K00269_0278_BHH7Y7BBXY_TATAAT_S44_L006_R1_001.unaln.bam 288986942 BAM NA 8a4b284e-c084-4a7e-9def-3dade40feeaa f60bcb0148ec7d50f9d99fc9907ca0aa NA Solid Tissue Normal +C3L-04804.miRNA-Seq.A.hg38 C3L-04804 LSCC miRNA-Seq tissue_normal CPT0271710006 ae14e750-f719-4d94-a2da-27865eb14020_mirnaseq_gdc_realn.bam 321477449 BAM NA 2b1791cd-4163-454a-ae39-ee14a93dbaa6 cacf8433520e8393eec860beb4044b07 hg38 Solid Tissue Normal C3L-04804.miRNA-Seq.T C3L-04804 LSCC miRNA-Seq tumor CPT0271660009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CACTCA_S32_L008_R1_001.unaln.bam 178949664 BAM NA d16746d6-b11f-4b67-ad79-7504dc4a04a8 265a47252633253bb0afb52def96fac7 NA Primary Tumor +C3L-04804.miRNA-Seq.T.hg38 C3L-04804 LSCC miRNA-Seq tumor CPT0271660009 ebe8d36a-a587-4369-96bc-ef167787b04e_mirnaseq_gdc_realn.bam 202434701 BAM NA e58d4af7-5a58-45f3-8745-145db6fa4e79 b49d31bdf2a248f1b7de733640e5cc85 hg38 Primary Tumor C3L-04804.RNA-Seq.R1.A C3L-04804 LSCC RNA-Seq tissue_normal CPT0271710006 200505_UNC32-K00270_0246_BHH5F5BBXY_GGAGCGTC-GTCCGTGC_S28_L007_R1_001.fastq.gz 3954974557 FASTQ NA 1dc0c8e5-af32-494f-87ce-addfc5172591 f6163e0ac884cf90fa8cb2d721a2e490 NA Solid Tissue Normal C3L-04804.RNA-Seq.R1.T C3L-04804 LSCC RNA-Seq tumor CPT0271660009 200505_UNC31-K00269_0277_AHGFKNBBXY_GTGAATAT-TCTCATTC_S31_L008_R1_001.fastq.gz 3630606497 FASTQ NA 8f1df38c-a08a-4163-9c6f-040406b7c08b ad77b41a52b17d6e781c582ba98db759 NA Primary Tumor C3L-04804.RNA-Seq.R2.A C3L-04804 LSCC RNA-Seq tissue_normal CPT0271710006 200505_UNC32-K00270_0246_BHH5F5BBXY_GGAGCGTC-GTCCGTGC_S28_L007_R2_001.fastq.gz 4879925528 FASTQ NA 73175b4a-676f-40dc-96b1-b7acbc3193fa f456b4a5e0e3fe5634e239f97c5dc05f NA Solid Tissue Normal C3L-04804.RNA-Seq.R2.T C3L-04804 LSCC RNA-Seq tumor CPT0271660009 200505_UNC31-K00269_0277_AHGFKNBBXY_GTGAATAT-TCTCATTC_S31_L008_R2_001.fastq.gz 3982146068 FASTQ NA 5a1d038c-27db-4d50-8c01-ac4f8468e8bf 0f499ecb349d8733b833d0c4de807dc4 NA Primary Tumor C3L-04804.WGS.N C3L-04804 LSCC WGS blood_normal CPT0271780002 CPT0271780002.WholeGenome.RP-2158.bam 24517687844 BAM NA 499aeed9-14f5-42b9-88df-11674f74cd4c 82751da4b019be1da3a1bc87641ed38f hg19 Blood Derived Normal +C3L-04804.WGS.N.hg38 C3L-04804 LSCC WGS blood_normal CPT0271780002 94c1986f-de49-4808-92d5-59f1854e9cab_wgs_gdc_realn.bam 73420136435 BAM NA 39910c35-c8c1-48ac-bace-b2628f125c54 19794406f8bebe1b5b27128c60dd0471 hg38 Blood Derived Normal C3L-04804.WGS.T C3L-04804 LSCC WGS tumor CPT0271660006 CPT0271660006.WholeGenome.RP-2158.bam 26118439189 BAM NA 46c9466c-2837-4522-8e4c-1840013ca0c3 d1c2c48fc300fd88c6d74801962b2bb0 hg19 Primary Tumor +C3L-04804.WGS.T.hg38 C3L-04804 LSCC WGS tumor CPT0271660006 31f213b0-bb8d-4681-b436-da192eedc9df_wgs_gdc_realn.bam 78966557835 BAM NA c30c30ef-66ac-4d2c-8328-73abf63e57bd 297a4ef332d1cc8d284910d4e97829c8 hg38 Primary Tumor C3L-04804.WXS.A C3L-04804 LSCC WXS tissue_normal CPT0271710009 CPT0271710009.WholeExome.RP-1303.bam 22814879690 BAM NA 03a4b125-5e5b-44da-a44f-2dd860c86cec fdc47d1aeec44d5ba9627adc9dc6e170 hg19 Solid Tissue Normal C3L-04804.WXS.N C3L-04804 LSCC WXS blood_normal CPT0271780002 CPT0271780002.WholeExome.RP-1303.bam 22508946655 BAM NA a87ada30-899e-4b11-8e64-e1899fde8ba6 9c829c6a28664a26240e046bfe04e8c1 hg19 Blood Derived Normal C3L-04804.WXS.T C3L-04804 LSCC WXS tumor CPT0271660006 CPT0271660006.WholeExome.RP-1303.bam 30498353188 BAM NA 077c315f-adf6-467b-b75b-bd1b92a79b46 b1e2df41259a700085af2d2f2623fca4 hg19 Primary Tumor @@ -13739,13 +13916,17 @@ C3L-04808.MethArray.Green.T C3L-04808 LSCC Methylation Array tumor CPT0298280006 C3L-04808.MethArray.Red.A C3L-04808 LSCC Methylation Array tissue_normal CPT0298310006 204372030023_R08C01_Red.idat 13677895 IDAT Red d71b521e-9c84-4e90-a68e-471e49715f47 bc83d3c47160dcdbef129a9bc84815a2 NA Solid Tissue Normal C3L-04808.MethArray.Red.T C3L-04808 LSCC Methylation Array tumor CPT0298280006 204372030070_R07C01_Red.idat 13677900 IDAT Red 2d822cdd-0349-4b15-b53b-eab011821f3a 19e83254d0bea85c62d6e1cacddb84b7 NA Primary Tumor C3L-04808.miRNA-Seq.A C3L-04808 LSCC miRNA-Seq tissue_normal CPT0298310009 200513_UNC31-K00269_0278_BHH7Y7BBXY_GGTAGC_S16_L005_R1_001.unaln.bam 216812686 BAM NA 4881423a-27a3-4e27-b557-9af5bbaee921 47d2e1c1e4b5e433e094b6e4eac751cf NA Solid Tissue Normal +C3L-04808.miRNA-Seq.A.hg38 C3L-04808 LSCC miRNA-Seq tissue_normal CPT0298310009 cd332395-ee37-463e-a513-2ba85b0e53d7_mirnaseq_gdc_realn.bam 247111078 BAM NA 62a18584-2c36-4648-90ea-a432266d924d 4cb0be3ccfd93c921bd16a2fa4a51ccf hg38 Solid Tissue Normal C3L-04808.miRNA-Seq.T C3L-04808 LSCC miRNA-Seq tumor CPT0298280009 200224_UNC31-K00269_0267_AHC722BBXY_CGATGT_S2_L006_R1_001.unaln.bam 212607497 BAM NA 2d12e9d7-a277-463b-b314-42bafaf125f7 dc2b110d28a9dcef757cc791be0d4961 NA Primary Tumor +C3L-04808.miRNA-Seq.T.hg38 C3L-04808 LSCC miRNA-Seq tumor CPT0298280009 6a73dd0b-52e1-4a79-90cd-ceaa7308fa70_mirnaseq_gdc_realn.bam 237118876 BAM NA c3c82b64-0873-418e-a936-d8a3554bc586 f55db0b3df8a62099dce4efe8cae2188 hg38 Primary Tumor C3L-04808.RNA-Seq.R1.A C3L-04808 LSCC RNA-Seq tissue_normal CPT0298310009 200505_UNC32-K00270_0246_BHH5F5BBXY_ATGAGGCC-GTTAATTG_S6_L002_R1_001.fastq.gz 4288462316 FASTQ NA 712589eb-f67d-4055-a20f-0bd599b09d5c 878f9fecbbac5f1e108a4dc59351a3c3 NA Solid Tissue Normal C3L-04808.RNA-Seq.R1.T C3L-04808 LSCC RNA-Seq tumor CPT0298280009 200428_UNC32-K00270_0243_AHG3Y3BBXY_GCGCTCTA-GCTCCGAC_S18_L005_R1_001.fastq.gz 3879878723 FASTQ NA b8010249-4903-4091-9712-b2f9e90e8cc7 283ce1e0a8414047be8e44d4fb72a098 NA Primary Tumor C3L-04808.RNA-Seq.R2.A C3L-04808 LSCC RNA-Seq tissue_normal CPT0298310009 200505_UNC32-K00270_0246_BHH5F5BBXY_ATGAGGCC-GTTAATTG_S6_L002_R2_001.fastq.gz 5191911855 FASTQ NA 148e8f13-4990-4215-8baa-c2cb4ab4974c 58b4f622a1e911a643c648c0350ba6d4 NA Solid Tissue Normal C3L-04808.RNA-Seq.R2.T C3L-04808 LSCC RNA-Seq tumor CPT0298280009 200428_UNC32-K00270_0243_AHG3Y3BBXY_GCGCTCTA-GCTCCGAC_S18_L005_R2_001.fastq.gz 4086445798 FASTQ NA dc42b8fe-573c-4d61-bc51-0c05161b88c0 1230615871e493141c1ec944a7e4c3ea NA Primary Tumor C3L-04808.WGS.N C3L-04808 LSCC WGS blood_normal CPT0298360002 CPT0298360002.WholeGenome.RP-2158.bam 19153558988 BAM NA bc7092fd-2f78-4f61-b9cc-0571ac6e2812 5e58f468cab4bd0e5ad298f7aecdfed5 hg19 Blood Derived Normal +C3L-04808.WGS.N.hg38 C3L-04808 LSCC WGS blood_normal CPT0298360002 c15ee2a6-727a-430d-b7c0-61dc832d0dc9_wgs_gdc_realn.bam 57262199273 BAM NA a78e3b98-6eae-4067-858e-c2a3835b7b21 954d6476a753f3ea0802b02ff45d9c74 hg38 Blood Derived Normal C3L-04808.WGS.T C3L-04808 LSCC WGS tumor CPT0298280006 CPT0298280006.WholeGenome.RP-2158.bam 22740077927 BAM NA 258726c5-7312-4eff-a525-63dfeff141c5 667e24695ffcf1eb133936afb9c82ebe hg19 Primary Tumor +C3L-04808.WGS.T.hg38 C3L-04808 LSCC WGS tumor CPT0298280006 d9661c5a-e609-4b7a-8ddf-03ee137c8ab6_wgs_gdc_realn.bam 68211453696 BAM NA 59d4d215-4562-4cab-b497-130d60b73149 92aa05bc63bc4894350445099c026f1f hg38 Primary Tumor C3L-04808.WXS.A C3L-04808 LSCC WXS tissue_normal CPT0298310006 CPT0298310006.WholeExome.RP-1303.bam 23872272738 BAM NA 617170fe-5a59-4c2e-acbd-227eaf287127 a7defe434ec43c38eae48e08a43733d7 hg19 Solid Tissue Normal C3L-04808.WXS.N C3L-04808 LSCC WXS blood_normal CPT0298360002 CPT0298360002.WholeExome.RP-1303.bam 22364477269 BAM NA 3ef92f33-9e03-413c-aa5a-4552b10e873d 669fe91040cbf0cb68c588312ccfd023 hg19 Blood Derived Normal C3L-04808.WXS.T C3L-04808 LSCC WXS tumor CPT0298280006 CPT0298280006.WholeExome.RP-1303.bam 33141914649 BAM NA 5f9c8604-7238-485a-9b95-4cdc6cbc499c 6248e1c18d1f9706b3056f32e4d29c38 hg19 Primary Tumor @@ -13756,9 +13937,11 @@ C3L-04815.RNA-Seq.R2.T C3L-04815 GBM RNA-Seq tumor CPT0327090008 200505_UNC31-K0 C3L-04815.WGS.N C3L-04815 GBM WGS blood_normal CPT0327200002 CPT0327200002.WholeGenome.RP-2158.bam 24108701234 BAM NA b5145261-bab8-46be-b48d-8a80b69f34dc 65122f959c4b4e92b0d5e8c347e9637d hg19 Blood Derived Normal C3L-04815.WGS.T C3L-04815 GBM WGS tumor CPT0327090006 CPT0327090006.WholeGenome.RP-2158.bam 25418013508 BAM NA 611742e4-6936-484e-ac86-9f1ef316f749 67dad132a56c8671f462cdecee9cbde7 hg19 Primary Tumor C3L-04815.WXS.N C3L-04815 GBM WXS blood_normal CPT0327200002 CPT0327200002.WholeExome.RP-1303.bam 27836915389 BAM NA 67882a3f-48ee-4b68-80bd-55cb703e0c39 7a468c4f2a40fb2c1d22c90880796396 hg19 Blood Derived Normal +C3L-04815.WXS.T C3L-04815 GBM WXS tumor CPT0327090006 CPT0327090006.WholeExome.RP-1303.bam 47856916140 BAM NA e3200c8b-9941-480f-a207-b34acaa190ed 5214f27537a7ce7632cb6a10ec20d4f5 hg19 Primary Tumor C3L-04817.MethArray.Green.T C3L-04817 GBM Methylation Array tumor CPT0327250006 204367470132_R04C01_Grn.idat 13677880 IDAT Green cc3fc42b-e851-466c-a64b-9216ae3568d6 8b98ed092cbadb8cdfd555ffdc4b05e4 NA Primary Tumor C3L-04817.MethArray.Red.T C3L-04817 GBM Methylation Array tumor CPT0327250006 204367470132_R04C01_Red.idat 13677880 IDAT Red 9d14ebcc-3f85-49bf-8c9b-76ab87d03125 0c72455d675bbc09bb07ef404c3f9c85 NA Primary Tumor C3L-04817.miRNA-Seq.T C3L-04817 GBM miRNA-Seq tumor CPT0327250009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CAGGCG_S33_L008_R1_001.unaln.bam 163277644 BAM NA 77519768-82d7-4334-a1a8-5c2611a4b841 63f9a0ec6a534f7678e3315bf6721fb9 NA Primary Tumor +C3L-04817.miRNA-Seq.T.hg38 C3L-04817 GBM miRNA-Seq tumor CPT0327250009 61ae4291-409f-4029-8316-597f87d114d6_mirnaseq_gdc_realn.bam 183101008 BAM NA 772cdde7-6d0e-4925-a789-f8c75bdf21bf 89a80cf59536cd9924b2697ddecacf08 hg38 Primary Tumor C3L-04817.RNA-Seq.R1.T C3L-04817 GBM RNA-Seq tumor CPT0327250009 200518_UNC32-K00270_0247_AHH573BBXY_AACTGTAG-ACGCCGCA_S25_L003_R1_001.fastq.gz 6357599724 FASTQ NA e3577dd8-984f-486c-9d9e-ce8d4e8889be 3f205f423ee42f5cb7ec0c0756d56af0 NA Primary Tumor C3L-04817.RNA-Seq.R2.T C3L-04817 GBM RNA-Seq tumor CPT0327250009 200518_UNC32-K00270_0247_AHH573BBXY_AACTGTAG-ACGCCGCA_S25_L003_R2_001.fastq.gz 7503411381 FASTQ NA 0a870ed5-d914-42cf-879c-b2d81c020910 d56b6909bd4e21cbeb0f546ab16317db NA Primary Tumor C3L-04817.WGS.N C3L-04817 GBM WGS blood_normal CPT0329360002 CPT0329360002.WholeGenome.RP-2158.bam 20589037834 BAM NA fce9f8b5-18c4-4bb2-b9a1-0db673d19d23 47e2c53920b883ff6bd05b8fe539628e hg19 Blood Derived Normal @@ -13768,6 +13951,7 @@ C3L-04817.WXS.T C3L-04817 GBM WXS tumor CPT0327250006 CPT0327250006.WholeExome.R C3L-04819.MethArray.Green.T C3L-04819 GBM Methylation Array tumor CPT0300330007 204372030023_R02C01_Grn.idat 13677895 IDAT Green 41e46af0-305d-4723-8754-aedc383d733f 1462dd6283f67e19d6ca052bc7295487 NA Primary Tumor C3L-04819.MethArray.Red.T C3L-04819 GBM Methylation Array tumor CPT0300330007 204372030023_R02C01_Red.idat 13677895 IDAT Red cdc77029-fd84-4da7-9f76-56a37bfe9512 13c26ab41e8464032a3c5aa07215faed NA Primary Tumor C3L-04819.miRNA-Seq.T C3L-04819 GBM miRNA-Seq tumor CPT0300330010 200513_UNC31-K00269_0278_BHH7Y7BBXY_TCGAAG_S47_L008_R1_001.unaln.bam 247622064 BAM NA 1ed49b4d-2fb4-4621-b669-2124ae89ded9 e4c306c4d3aa363b0cce6113b9a32bee NA Primary Tumor +C3L-04819.miRNA-Seq.T.hg38 C3L-04819 GBM miRNA-Seq tumor CPT0300330010 239ada33-a818-423a-898e-2b2e1d0253a2_mirnaseq_gdc_realn.bam 282104185 BAM NA 7bed5e55-5d38-44d8-af0b-5f6b97668b63 4949736b2a37b618809e3511ca82712a hg38 Primary Tumor C3L-04819.RNA-Seq.R1.T C3L-04819 GBM RNA-Seq tumor CPT0300330010 200218_UNC31-K00269_0266_AHGKHKBBXY_TAAGGTCA-TGTCGTAG_S56_L005_R1_001.fastq.gz 4374501298 FASTQ NA 083859d3-282e-4035-998d-83a4f425f9cf ccee4b255c9193e6fcbb77c7f4f0b478 NA Primary Tumor C3L-04819.RNA-Seq.R2.T C3L-04819 GBM RNA-Seq tumor CPT0300330010 200218_UNC31-K00269_0266_AHGKHKBBXY_TAAGGTCA-TGTCGTAG_S56_L005_R2_001.fastq.gz 4754062682 FASTQ NA 8e96b951-e574-4ab7-af77-0291721c10f2 429887ff2f395a865a4dd62a6b1c2e9d NA Primary Tumor C3L-04819.WGS.N C3L-04819 GBM WGS blood_normal CPT0300680002 CPT0300680002.WholeGenome.RP-2158.bam 22538740543 BAM NA 7b5a2ccc-a643-4bbc-8361-cd0588cbabf2 fe3f191a513941aeb2eb93ab75be665e hg19 Blood Derived Normal @@ -13777,13 +13961,17 @@ C3L-04819.WXS.T C3L-04819 GBM WXS tumor CPT0300330007 CPT0300330007.WholeExome.R C3L-04838.MethArray.Green.T C3L-04838 GBM Methylation Array tumor CPT0329380007 204367470131_R06C01_Grn.idat 13677880 IDAT Green cf3fa65e-9eb5-408b-aa66-d84c84fac2c5 51e114e3d6ac3c6e64b5dd48c549349e NA Primary Tumor C3L-04838.MethArray.Red.T C3L-04838 GBM Methylation Array tumor CPT0329380007 204367470131_R06C01_Red.idat 13677880 IDAT Red 9fe20c53-dada-4882-bcad-4eec1eca32be fec28822bf7789eb65d60eba8471de02 NA Primary Tumor C3L-04838.miRNA-Seq.T C3L-04838 GBM miRNA-Seq tumor CPT0329380010 200513_UNC31-K00269_0278_BHH7Y7BBXY_CAAAAG_S28_L008_R1_001.unaln.bam 144603851 BAM NA 970d261c-e984-48fe-99e8-616c64e50550 aa65755fa9dc8c2a8daa98d48e527e67 NA Primary Tumor +C3L-04838.miRNA-Seq.T.hg38 C3L-04838 GBM miRNA-Seq tumor CPT0329380010 f975781b-04eb-4f81-a267-f9efa5d030c4_mirnaseq_gdc_realn.bam 169295647 BAM NA 7e14dc7c-aebc-4648-8c10-41c44173723f 59b3dc9b487800c09de3bbdf20e37920 hg38 Primary Tumor C3L-04838.RNA-Seq.R1.T C3L-04838 GBM RNA-Seq tumor CPT0329380010 200505_UNC31-K00269_0277_AHGFKNBBXY_GACGTCTT-GGTTCACC_S27_L007_R1_001.fastq.gz 4656797411 FASTQ NA 73658b9b-94b2-4b47-ac91-89ae815b22ae 21a5bd7d90386ac151cca80d002d7b69 NA Primary Tumor C3L-04838.RNA-Seq.R2.T C3L-04838 GBM RNA-Seq tumor CPT0329380010 200505_UNC31-K00269_0277_AHGFKNBBXY_GACGTCTT-GGTTCACC_S27_L007_R2_001.fastq.gz 5166364306 FASTQ NA 52fafe76-c371-49f2-a86c-366d79d9d5c5 433a11448a74b520978e4630bbe733bc NA Primary Tumor C3L-04838.WGS.N C3L-04838 GBM WGS blood_normal CPT0329530002 CPT0329530002.WholeGenome.RP-2158.bam 23458458005 BAM NA 085d7478-803f-4bfb-81dc-0af1b087c20d 0d87d5a072f95c78b66896ae823feb84 hg19 Blood Derived Normal C3L-04838.WGS.T C3L-04838 GBM WGS tumor CPT0329380007 CPT0329380007.WholeGenome.RP-2158.bam 21352974464 BAM NA 628713b5-a9ad-4a0f-bb4b-cd5cd7cc0a27 022832bf799d0a7413bc2fb397ad37ba hg19 Primary Tumor +C3L-04838.WXS.N C3L-04838 GBM WXS blood_normal CPT0329530002 CPT0329530002.WholeExome.RP-1303.bam 43918090236 BAM NA 4be236b8-4702-49df-926e-2511e5fed750 4b4ac036bd983d516e3ec09846182654 hg19 Blood Derived Normal +C3L-04838.WXS.T C3L-04838 GBM WXS tumor CPT0329380007 CPT0329380007.WholeExome.RP-1303.bam 45378917155 BAM NA a3e1f194-503c-4530-90c3-f4cd2fb848f0 3579f4235916258860539bcd7160e7b5 hg19 Primary Tumor C3L-04843.MethArray.Green.T C3L-04843 GBM Methylation Array tumor CPT0329590006 204372030106_R05C01_Grn.idat 13677885 IDAT Green fc664367-0450-4210-b0c0-32953d26619c c34710747e8361b5a1720f2f47204a83 NA Primary Tumor C3L-04843.MethArray.Red.T C3L-04843 GBM Methylation Array tumor CPT0329590006 204372030106_R05C01_Red.idat 13677885 IDAT Red a4350bd7-a768-4072-8477-81b693aa39b9 7e770a2441dc2138b3b6bd23917980e3 NA Primary Tumor C3L-04843.miRNA-Seq.T C3L-04843 GBM miRNA-Seq tumor CPT0329590009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CAACTA_S29_L008_R1_001.unaln.bam 250439366 BAM NA fa10c05a-c87c-43cc-b088-4864057b869d b0130eb501b3ac759323cceedbfc6f22 NA Primary Tumor +C3L-04843.miRNA-Seq.T.hg38 C3L-04843 GBM miRNA-Seq tumor CPT0329590009 515d1e32-f651-4724-bb81-61811c6521bd_mirnaseq_gdc_realn.bam 285186134 BAM NA 1cb7f97e-d7fe-40d4-8404-95cf05c3014d 8090a6854834a71861f556799f1d5e50 hg38 Primary Tumor C3L-04843.RNA-Seq.R1.T C3L-04843 GBM RNA-Seq tumor CPT0329590009 200505_UNC31-K00269_0277_AHGFKNBBXY_TGCGAGAC-CATTGTTG_S32_L008_R1_001.fastq.gz 4080113834 FASTQ NA b2976a2a-0485-4bcd-8c55-3b7d1a6b0414 bcf89a21b7f8b83a8be606deb5334234 NA Primary Tumor C3L-04843.RNA-Seq.R2.T C3L-04843 GBM RNA-Seq tumor CPT0329590009 200505_UNC31-K00269_0277_AHGFKNBBXY_TGCGAGAC-CATTGTTG_S32_L008_R2_001.fastq.gz 4589850953 FASTQ NA 97ea2622-ed5e-42d5-b3cf-135be69cd9c3 7c9778bca1b0914e1d36eb85016b3267 NA Primary Tumor C3L-04843.WGS.N C3L-04843 GBM WGS blood_normal CPT0329700002 CPT0329700002.WholeGenome.RP-2158.bam 29138716308 BAM NA a0e1a1e7-1321-4e9e-95de-91f1c18cafde cddb630671b78138724952e4d031fcea hg19 Blood Derived Normal @@ -13864,13 +14052,17 @@ C3L-04854.MethArray.Green.T C3L-04854 LSCC Methylation Array tumor CPT0289110007 C3L-04854.MethArray.Red.A C3L-04854 LSCC Methylation Array tissue_normal CPT0289170006 204367490151_R08C01_Red.idat 13677895 IDAT Red 0812e217-aa0e-4004-aae1-35a95bdc9b13 9fd562434a496db14c28e13b2f7c584c NA Solid Tissue Normal C3L-04854.MethArray.Red.T C3L-04854 LSCC Methylation Array tumor CPT0289110007 204372030070_R05C01_Red.idat 13677904 IDAT Red aecaf259-ee6a-4062-a125-5c4c0c44e978 5dbdd2f57ab8ef98aeb8ada38fa57458 NA Primary Tumor C3L-04854.miRNA-Seq.A C3L-04854 LSCC miRNA-Seq tissue_normal CPT0289170009 200513_UNC31-K00269_0278_BHH7Y7BBXY_ATTCCT_S27_L006_R1_001.unaln.bam 164233246 BAM NA 1a6394b8-50ba-4ce2-a2e3-d4daff47e7af 867861623cbdd892fbd0b28dedb1eb13 NA Solid Tissue Normal +C3L-04854.miRNA-Seq.A.hg38 C3L-04854 LSCC miRNA-Seq tissue_normal CPT0289170009 89f35920-847b-4909-90fc-a1f7c160e93b_mirnaseq_gdc_realn.bam 186654989 BAM NA db87d560-cdc5-48dc-bbf8-b64617a751e9 ab29d4a244ff83ad137ce25b3aa1fa86 hg38 Solid Tissue Normal C3L-04854.miRNA-Seq.T C3L-04854 LSCC miRNA-Seq tumor CPT0289110010 200224_UNC31-K00269_0267_AHC722BBXY_GTTTCG_S21_L006_R1_001.unaln.bam 206767089 BAM NA 118327e9-ff5c-47c9-a0ca-98b91e75522e abb15b0eb11e19d384b775d7557942dc NA Primary Tumor +C3L-04854.miRNA-Seq.T.hg38 C3L-04854 LSCC miRNA-Seq tumor CPT0289110010 a8301e68-62f5-42b0-8341-500158c05709_mirnaseq_gdc_realn.bam 227836886 BAM NA 68c3a257-3fc8-4f4e-836b-917de6e58879 695f9659a6cb830ad63e1e618cd480b8 hg38 Primary Tumor C3L-04854.RNA-Seq.R1.A C3L-04854 LSCC RNA-Seq tissue_normal CPT0289170009 200505_UNC32-K00270_0246_BHH5F5BBXY_CTTGGTAT-CCAAGTCC_S10_L003_R1_001.fastq.gz 3975190285 FASTQ NA e210dc35-2884-413e-bf8b-e12fd56ba168 c60a4e62bb8b150c8aaea353f6096edb NA Solid Tissue Normal C3L-04854.RNA-Seq.R1.T C3L-04854 LSCC RNA-Seq tumor CPT0289110010 200428_UNC31-K00269_0275_AHGCJVBBXY_GCCACAGG-CATGCCAT_S5_L002_R1_001.fastq.gz 3631461374 FASTQ NA f6dedc7f-4441-4178-b55f-33b8c3fa5d3c 92753ed5456798ff2af1d16062eae30c NA Primary Tumor C3L-04854.RNA-Seq.R2.A C3L-04854 LSCC RNA-Seq tissue_normal CPT0289170009 200505_UNC32-K00270_0246_BHH5F5BBXY_CTTGGTAT-CCAAGTCC_S10_L003_R2_001.fastq.gz 4833262411 FASTQ NA 45b60f43-be80-4b02-a2cf-edcac84968c4 e91ce44002f569984bab5d48c91982ac NA Solid Tissue Normal C3L-04854.RNA-Seq.R2.T C3L-04854 LSCC RNA-Seq tumor CPT0289110010 200428_UNC31-K00269_0275_AHGCJVBBXY_GCCACAGG-CATGCCAT_S5_L002_R2_001.fastq.gz 3882433863 FASTQ NA edbb4e5b-328b-4b64-86be-375330e674b2 f878dbef818e5fd9c3208c54cbd5f0ef NA Primary Tumor C3L-04854.WGS.N C3L-04854 LSCC WGS blood_normal CPT0289270002 CPT0289270002.WholeGenome.RP-2158.bam 21471712355 BAM NA 8fd6041b-d9aa-4c0c-9a42-b324dd126928 dc0d2145665b3eca46ae8dd5b7b4e083 hg19 Blood Derived Normal +C3L-04854.WGS.N.hg38 C3L-04854 LSCC WGS blood_normal CPT0289270002 d6b4852d-f75b-437d-9a33-41f25cad0437_wgs_gdc_realn.bam 63989641478 BAM NA 4e87e15b-8d04-47e2-a208-34ad0ecedaed ace79db7e563705380fea35dffe19c20 hg38 Blood Derived Normal C3L-04854.WGS.T C3L-04854 LSCC WGS tumor CPT0289110007 CPT0289110007.WholeGenome.RP-2158.bam 26573114416 BAM NA 3b05623a-f6f5-414e-a24f-69e4673d0f80 dbaea88b7ce683d70b9639b8c18a18dc hg19 Primary Tumor +C3L-04854.WGS.T.hg38 C3L-04854 LSCC WGS tumor CPT0289110007 e5c108a5-8b09-4dd6-9273-e5da4f818bf7_wgs_gdc_realn.bam 79050662634 BAM NA 8724bd37-e8e2-4f2f-b8e9-ef1912d56040 6bda9fbcefe5fb80429ce48bbcb055f8 hg38 Primary Tumor C3L-04854.WXS.A C3L-04854 LSCC WXS tissue_normal CPT0289170006 CPT0289170006.WholeExome.RP-1303.bam 23690888225 BAM NA a3a27570-5661-417c-ab92-4d3c14981786 359c80946a3bb98b00247ccca057d13c hg19 Solid Tissue Normal C3L-04854.WXS.N C3L-04854 LSCC WXS blood_normal CPT0289270002 CPT0289270002.WholeExome.RP-1303.bam 29328801530 BAM NA c4c7123f-a7cd-4f73-8748-bcb9d7a8514c ae675666fb12cdc5566003c2b8b4521d hg19 Blood Derived Normal C3L-04854.WXS.T C3L-04854 LSCC WXS tumor CPT0289110007 CPT0289110007.WholeExome.RP-1303.bam 18756010392 BAM NA 8bb58c6a-a3d3-4ee1-b412-95cde0ac0a92 dc729e5f3bfbd0349e7beb06d8c0e342 hg19 Primary Tumor @@ -13879,10 +14071,13 @@ C3L-04856.MethArray.Green.T C3L-04856 LSCC Methylation Array tumor CPT0289330006 C3L-04856.MethArray.Red.A C3L-04856 LSCC Methylation Array tissue_normal CPT0289420006 204372030164_R08C01_Red.idat 13677880 IDAT Red 523100fc-f66b-449e-acd2-f7e3859d91e8 0af499cd20970b11e629b92772dd3558 NA Solid Tissue Normal C3L-04856.MethArray.Red.T C3L-04856 LSCC Methylation Array tumor CPT0289330006 204372030011_R06C01_Red.idat 13677890 IDAT Red a417653b-cd5d-4a0c-a818-5e2588f57466 14c4f606b1e3e47d19694a175c65d232 NA Primary Tumor C3L-04856.miRNA-Seq.T C3L-04856 LSCC miRNA-Seq tumor CPT0289330009 200224_UNC31-K00269_0267_AHC722BBXY_CGTACG_S22_L006_R1_001.unaln.bam 163739169 BAM NA efee3a28-4d65-4e74-96b9-21e26cd127ed 46c119dc81545e48c679dae2353f659e NA Primary Tumor +C3L-04856.miRNA-Seq.T.hg38 C3L-04856 LSCC miRNA-Seq tumor CPT0289330009 fad7449c-b011-455d-b9e2-b9e9d574a013_mirnaseq_gdc_realn.bam 179281313 BAM NA 9032c90a-56e2-4cc5-9842-00c46b88da37 72a9edfcc04dd277827d7e2c9a76a728 hg38 Primary Tumor C3L-04856.RNA-Seq.R1.T C3L-04856 LSCC RNA-Seq tumor CPT0289330009 200428_UNC31-K00269_0275_AHGCJVBBXY_ATTGTGAA-TGCATTGC_S6_L002_R1_001.fastq.gz 3782200705 FASTQ NA 9f9f631e-d684-4940-88d5-2e80f0feac26 58944e11bd5eb5479a3300e42dad7ebe NA Primary Tumor C3L-04856.RNA-Seq.R2.T C3L-04856 LSCC RNA-Seq tumor CPT0289330009 200428_UNC31-K00269_0275_AHGCJVBBXY_ATTGTGAA-TGCATTGC_S6_L002_R2_001.fastq.gz 3990363868 FASTQ NA ae42bf00-7b1c-4d7d-95eb-bf93b4d1a727 157a153208caf15e47d974da669f1e01 NA Primary Tumor C3L-04856.WGS.N C3L-04856 LSCC WGS blood_normal CPT0289530002 CPT0289530002.WholeGenome.RP-2158.bam 25005609704 BAM NA d41c4029-eb6d-41d2-a618-08cbbaa1111d 716e3f51bee1f6324276b305a87c588f hg19 Blood Derived Normal +C3L-04856.WGS.N.hg38 C3L-04856 LSCC WGS blood_normal CPT0289530002 6aef6afc-a1f6-4f73-978f-39455316c95a_wgs_gdc_realn.bam 73268514213 BAM NA 7cda4212-99fa-42df-937b-7eb1e7f90ad3 28813f0abe7169d5789ce204712bc0c8 hg38 Blood Derived Normal C3L-04856.WGS.T C3L-04856 LSCC WGS tumor CPT0289330006 CPT0289330006.WholeGenome.RP-2158.bam 25366672311 BAM NA cac3d6d7-8dad-43ee-b596-bd3098f022ab a6624dbee473cb543459876601eac0fc hg19 Primary Tumor +C3L-04856.WGS.T.hg38 C3L-04856 LSCC WGS tumor CPT0289330006 efa93229-0fa2-44fb-8ff0-71219ba65905_wgs_gdc_realn.bam 74056184684 BAM NA 910050cb-db5c-462d-83df-055da02b27a4 4ae868b2b788c00b86525b6dd25ae27e hg38 Primary Tumor C3L-04856.WXS.A C3L-04856 LSCC WXS tissue_normal CPT0289420006 CPT0289420006.WholeExome.RP-1303.bam 22425950194 BAM NA cf0b8a54-81a7-4124-9ad2-3c19d59899ef 1cc0185b8e268a420a209e65fe6b4c11 hg19 Solid Tissue Normal C3L-04856.WXS.N C3L-04856 LSCC WXS blood_normal CPT0289530002 CPT0289530002.WholeExome.RP-1303.bam 20472371739 BAM NA cd99199b-d8e6-453c-8d3b-60048b35d7cf 019b253466beef75af2aaa4a3d4c8f60 hg19 Blood Derived Normal C3L-04856.WXS.T C3L-04856 LSCC WXS tumor CPT0289330006 CPT0289330006.WholeExome.RP-1303.bam 23213915949 BAM NA 329e4d21-54cf-40e4-82e4-c17b18f08fc4 1a15e43c2d266897b5d917f3e1e49fd8 hg19 Primary Tumor @@ -13891,27 +14086,36 @@ C3L-04861.MethArray.Green.T C3L-04861 LSCC Methylation Array tumor CPT0289560006 C3L-04861.MethArray.Red.A C3L-04861 LSCC Methylation Array tissue_normal CPT0289600006 204372030015_R08C01_Red.idat 13677905 IDAT Red 909b8915-b483-431a-9533-9f5d64fba92f 42a2de2a6e1b46e9a199eb3a9b5775b5 NA Solid Tissue Normal C3L-04861.MethArray.Red.T C3L-04861 LSCC Methylation Array tumor CPT0289560006 204367470127_R07C01_Red.idat 13677890 IDAT Red cc62b838-a265-45cb-8cbc-90827a2d07ba 1b486122fa59f6d26b44e0376f409d63 NA Primary Tumor C3L-04861.miRNA-Seq.A C3L-04861 LSCC miRNA-Seq tissue_normal CPT0289600009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CAAAAG_S28_L006_R1_001.unaln.bam 192533018 BAM NA 1d068a4b-e9dd-461e-a738-a0dd8024e6e5 df66f78ed00140d78c75073af0ed75e7 NA Solid Tissue Normal +C3L-04861.miRNA-Seq.A.hg38 C3L-04861 LSCC miRNA-Seq tissue_normal CPT0289600009 3cb84c11-8a0a-41e5-b48c-12f7b52d2090_mirnaseq_gdc_realn.bam 211138254 BAM NA b537707b-8c8c-4229-9b42-8158fa6051a2 eafc16e5dc28d95971544e96e46b7345 hg38 Solid Tissue Normal C3L-04861.miRNA-Seq.T C3L-04861 LSCC miRNA-Seq tumor CPT0289560009 200224_UNC31-K00269_0267_AHC722BBXY_GAGTGG_S23_L006_R1_001.unaln.bam 221384567 BAM NA ee37b7d7-4671-4821-8af8-f3d82d44b75c e51e102d79a0d134792a2b2a7dac2407 NA Primary Tumor +C3L-04861.miRNA-Seq.T.hg38 C3L-04861 LSCC miRNA-Seq tumor CPT0289560009 0518d91d-2768-49a4-b339-76e2b83bcf49_mirnaseq_gdc_realn.bam 248559750 BAM NA 300fabe3-599e-4e41-9474-88a23f44dad2 2b3412877b91faa6256d02c75391ceb7 hg38 Primary Tumor C3L-04861.RNA-Seq.R1.A C3L-04861 LSCC RNA-Seq tissue_normal CPT0289600009 200505_UNC32-K00270_0246_BHH5F5BBXY_TCCAACGC-TTGGACTT_S12_L003_R1_001.fastq.gz 4056010431 FASTQ NA e383fa02-0d44-4d97-a7ca-a5f047102b98 93661a0bcae87dba473af0a9bf1d9f30 NA Solid Tissue Normal C3L-04861.RNA-Seq.R1.T C3L-04861 LSCC RNA-Seq tumor CPT0289560009 200428_UNC31-K00269_0275_AHGCJVBBXY_ACTCGTGT-ATTGGAAC_S7_L002_R1_001.fastq.gz 3796378318 FASTQ NA 4740154b-84b2-4e0b-89ba-a8acf8a35938 e2235773bf574fe1adcc8a5973402622 NA Primary Tumor C3L-04861.RNA-Seq.R2.A C3L-04861 LSCC RNA-Seq tissue_normal CPT0289600009 200505_UNC32-K00270_0246_BHH5F5BBXY_TCCAACGC-TTGGACTT_S12_L003_R2_001.fastq.gz 5075923519 FASTQ NA ecc97835-799a-456c-9901-244f0947c7eb 3f25e75ed5361b4d842728be1581b087 NA Solid Tissue Normal C3L-04861.RNA-Seq.R2.T C3L-04861 LSCC RNA-Seq tumor CPT0289560009 200428_UNC31-K00269_0275_AHGCJVBBXY_ACTCGTGT-ATTGGAAC_S7_L002_R2_001.fastq.gz 4044369499 FASTQ NA 3753c93c-35c0-43a3-b8b7-6d8a7a8ab028 5b11a1b70af90e32aaf849ca08aa64ec NA Primary Tumor C3L-04861.WGS.N C3L-04861 LSCC WGS blood_normal CPT0289710002 CPT0289710002.WholeGenome.RP-2158.bam 29698919285 BAM NA 9aa41222-d684-4b66-943f-d0fd3ffc3bea df9c00f331129cccb664535c9bf52122 hg19 Blood Derived Normal +C3L-04861.WGS.N.hg38 C3L-04861 LSCC WGS blood_normal CPT0289710002 587a77b0-d172-490c-991d-1c6fdcb4c093_wgs_gdc_realn.bam 88702414451 BAM NA 189d7b19-780a-4bcc-ab76-aa8fc677b27b bdce1bb876b05f2023241d13afcd2484 hg38 Blood Derived Normal C3L-04861.WGS.T C3L-04861 LSCC WGS tumor CPT0289560006 CPT0289560006.WholeGenome.RP-2158.bam 25594847520 BAM NA eabdf2c8-2b33-4fbd-b0ea-d8009e308a5a 7382caf9f788977f6092f892de968cfd hg19 Primary Tumor +C3L-04861.WGS.T.hg38 C3L-04861 LSCC WGS tumor CPT0289560006 a70a2f42-2ae8-48b7-bb9e-db2dfe15c8c4_wgs_gdc_realn.bam 74453335894 BAM NA fa24097d-6c63-4b2e-8c7c-aeee3b72050b 89f7c66bd90ef19ca7106fc30e40d2a0 hg38 Primary Tumor C3L-04861.WXS.A C3L-04861 LSCC WXS tissue_normal CPT0289600006 CPT0289600006.WholeExome.RP-1303.bam 23272794108 BAM NA f2360740-03ae-4f37-9f1e-11d4e0d8c637 58a5ea16d803d72b1a26a6a3f1ca32eb hg19 Solid Tissue Normal C3L-04861.WXS.N C3L-04861 LSCC WXS blood_normal CPT0289710002 CPT0289710002.WholeExome.RP-1303.bam 22124582605 BAM NA 5e00461d-6514-4ecc-a086-0d23f0a835fc 74f0e3fcc35363629ffe9f955f58e3d6 hg19 Blood Derived Normal +C3L-04861.WXS.T C3L-04861 LSCC WXS tumor CPT0289560006 CPT0289560006.WholeExome.RP-1303.bam 51283462008 BAM NA c0292300-627b-47fa-b345-d5917aad7901 5369bc1b8829dfe787be7703936817c9 hg19 Primary Tumor C3L-04866.MethArray.Green.A C3L-04866 LSCC Methylation Array tissue_normal CPT0255430006 204372030014_R06C01_Grn.idat 13677895 IDAT Green 5c7f9cfb-3277-4224-9da4-1ca638f619ad 1ef69c3451320013a59365805d8baf85 NA Solid Tissue Normal C3L-04866.MethArray.Green.T C3L-04866 LSCC Methylation Array tumor CPT0255420006 204367490043_R06C01_Grn.idat 13677880 IDAT Green e63e12b6-7efc-4637-acba-c77fd4ef5cba d73e40d2d1257cdd5b5fd5e062b0a909 NA Primary Tumor C3L-04866.MethArray.Red.A C3L-04866 LSCC Methylation Array tissue_normal CPT0255430006 204372030014_R06C01_Red.idat 13677895 IDAT Red 4668ffdc-523f-46e1-bfd9-40a3307111c6 51a6ad373eed4d21d2de50820f24ce46 NA Solid Tissue Normal C3L-04866.MethArray.Red.T C3L-04866 LSCC Methylation Array tumor CPT0255420006 204367490043_R06C01_Red.idat 13677880 IDAT Red f7b7ae72-a175-4708-a3c6-045d03a9bf11 e053c703e750b0407ff7ad772ea386c7 NA Primary Tumor C3L-04866.miRNA-Seq.A C3L-04866 LSCC miRNA-Seq tissue_normal CPT0255430009 200513_UNC31-K00269_0278_BHH7Y7BBXY_GCCAAT_S14_L007_R1_001.unaln.bam 283938365 BAM NA ec164068-73da-46d7-a9b8-c29bd6da8a71 dcb1219d0ac51641088f0d7461b68533 NA Solid Tissue Normal +C3L-04866.miRNA-Seq.A.hg38 C3L-04866 LSCC miRNA-Seq tissue_normal CPT0255430009 3b9e7be4-230a-4520-82c3-18578f83600f_mirnaseq_gdc_realn.bam 315603629 BAM NA 8d8a3cbc-fec8-4f1c-9810-15c31e7f9d4d 8f03ec188dbce0f3060e4b6c07ad3ee6 hg38 Solid Tissue Normal C3L-04866.miRNA-Seq.T C3L-04866 LSCC miRNA-Seq tumor CPT0255420009 200224_UNC31-K00269_0267_AHC722BBXY_TAATCG_S42_L007_R1_001.unaln.bam 223534305 BAM NA 289c7cfb-7486-45ce-96a2-5d8ea64bf3c4 972acd4739d7db17e74483319a50723c NA Primary Tumor +C3L-04866.miRNA-Seq.T.hg38 C3L-04866 LSCC miRNA-Seq tumor CPT0255420009 4c804429-afc8-4c00-bb4e-ede228b64183_mirnaseq_gdc_realn.bam 248946602 BAM NA 9e19915a-8e6b-444e-97a7-8b544fa2fc2d eb15aa9dd138d6d3b3c65ff1251c49ce hg38 Primary Tumor C3L-04866.RNA-Seq.R1.A C3L-04866 LSCC RNA-Seq tissue_normal CPT0255430009 200505_UNC31-K00269_0277_AHGFKNBBXY_TGGTGGCA-TCCTGTAA_S8_L002_R1_001.fastq.gz 3747384627 FASTQ NA 20067dc4-1b7a-433b-8261-91bf2ba952fe fad0bf47fdd6147b3b89ad27de582ee6 NA Solid Tissue Normal C3L-04866.RNA-Seq.R1.T C3L-04866 LSCC RNA-Seq tumor CPT0255420009 200428_UNC32-K00270_0243_AHG3Y3BBXY_GCGCAAGC-TCACGCCG_S10_L003_R1_001.fastq.gz 3879397988 FASTQ NA 6bde87a0-821b-4c0d-8346-f9ec89d3ee6e 80775610a6d3669eb25a4a5f0be6d990 NA Primary Tumor C3L-04866.RNA-Seq.R2.A C3L-04866 LSCC RNA-Seq tissue_normal CPT0255430009 200505_UNC31-K00269_0277_AHGFKNBBXY_TGGTGGCA-TCCTGTAA_S8_L002_R2_001.fastq.gz 4197482715 FASTQ NA 3f986b3d-e2bc-42b9-a91e-7c3969a6177f d8a08371866c1665ec5373a2a8a114ef NA Solid Tissue Normal C3L-04866.RNA-Seq.R2.T C3L-04866 LSCC RNA-Seq tumor CPT0255420009 200428_UNC32-K00270_0243_AHG3Y3BBXY_GCGCAAGC-TCACGCCG_S10_L003_R2_001.fastq.gz 4125265787 FASTQ NA d07eefdf-b5cf-4d00-a0d5-a808bfe25fb8 177b539a139fec558cf58b6ac7def804 NA Primary Tumor C3L-04866.WGS.N C3L-04866 LSCC WGS blood_normal CPT0269240002 CPT0269240002.WholeGenome.RP-2158.bam 26984518666 BAM NA 2b508c6c-a82b-4f70-8ed9-13b2b879c134 4eff9bf9b7241f3d4f784b418cf0cd3b hg19 Blood Derived Normal +C3L-04866.WGS.N.hg38 C3L-04866 LSCC WGS blood_normal CPT0269240002 70bb1e58-a17c-4f61-b263-94f490da2e9c_wgs_gdc_realn.bam 79600797309 BAM NA f11a5195-8153-43a1-ba5b-681000d65a1c 12604376025bda452257fca560a2d44b hg38 Blood Derived Normal C3L-04866.WGS.T C3L-04866 LSCC WGS tumor CPT0255420006 CPT0255420006.WholeGenome.RP-2158.bam 23735728134 BAM NA c9ed18a4-a511-40d9-8298-875409a6d59c 374b84550f2fb631f25882bace0185e6 hg19 Primary Tumor +C3L-04866.WGS.T.hg38 C3L-04866 LSCC WGS tumor CPT0255420006 9bf9f218-3b59-4645-8b74-292e13639580_wgs_gdc_realn.bam 67519279374 BAM NA 56041f11-39a5-4bad-b4c8-76cdbe79669f fbe2fa37253805fa3c66cef5043fc7f4 hg38 Primary Tumor C3L-04866.WXS.A C3L-04866 LSCC WXS tissue_normal CPT0255430006 CPT0255430006.WholeExome.RP-1303.bam 23365117645 BAM NA 036ce600-c131-4ad3-8126-ebe4d05f7c75 38d1156231ce6de0e7894f151fe2cf93 hg19 Solid Tissue Normal C3L-04866.WXS.N C3L-04866 LSCC WXS blood_normal CPT0269240002 CPT0269240002.WholeExome.RP-1303.bam 22476834793 BAM NA 75894906-be52-4c8d-b1b6-d3a66f1bc0cb 197728f1696ddd62209278a610fa1b2e hg19 Blood Derived Normal C3L-04866.WXS.T C3L-04866 LSCC WXS tumor CPT0255420006 CPT0255420006.WholeExome.RP-1303.bam 26538230408 BAM NA 53874e57-a335-46a3-8671-91486bf009ae 1cbe5daceca839beff8b123199836d15 hg19 Primary Tumor @@ -13920,54 +14124,74 @@ C3L-04868.MethArray.Green.T C3L-04868 LSCC Methylation Array tumor CPT0252940006 C3L-04868.MethArray.Red.A C3L-04868 LSCC Methylation Array tissue_normal CPT0252960009 204372030087_R08C01_Red.idat 13677880 IDAT Red 1f6f12e7-2763-4bb9-a9f8-193e11ffcbc5 ba9352701dc23b2ed833abdb988a4dec NA Solid Tissue Normal C3L-04868.MethArray.Red.T C3L-04868 LSCC Methylation Array tumor CPT0252940006 204367470127_R05C01_Red.idat 13677890 IDAT Red 44c8d7f4-e656-444b-a342-8d795d7d57fa e6192b64d8f3a98b47c7d3aef9746519 NA Primary Tumor C3L-04868.miRNA-Seq.A C3L-04868 LSCC miRNA-Seq tissue_normal CPT0252960006 200513_UNC31-K00269_0278_BHH7Y7BBXY_GACGAC_S41_L006_R1_001.unaln.bam 229147650 BAM NA 7bc9357c-d17b-4034-8e11-2b8e39d42f8a 0fb6949f1589194ba723723c14b244be NA Solid Tissue Normal +C3L-04868.miRNA-Seq.A.hg38 C3L-04868 LSCC miRNA-Seq tissue_normal CPT0252960006 d6d02fe9-3a3d-4b62-9aaa-80a844da95e6_mirnaseq_gdc_realn.bam 254167565 BAM NA 335b0781-fda3-487c-bb57-9226bba9e7b3 e6b8a3f51cafb3b9178b8c715e91240b hg38 Solid Tissue Normal C3L-04868.miRNA-Seq.T C3L-04868 LSCC miRNA-Seq tumor CPT0252940009 200224_UNC31-K00269_0267_AHC722BBXY_ATTCCT_S27_L007_R1_001.unaln.bam 161639240 BAM NA 7823198e-6569-4c0f-ac30-ae521fd6123e d591e14b843b0059ec03ee1d18433d51 NA Primary Tumor +C3L-04868.miRNA-Seq.T.hg38 C3L-04868 LSCC miRNA-Seq tumor CPT0252940009 7654ed03-dff3-467b-890a-0cebb7fc8d59_mirnaseq_gdc_realn.bam 177255435 BAM NA e34edbcc-2412-4df0-b80e-5e125f746d02 d77ad88dd1a1c2596e373d68a2c02bfc hg38 Primary Tumor C3L-04868.RNA-Seq.R1.A C3L-04868 LSCC RNA-Seq tissue_normal CPT0252960006 200505_UNC32-K00270_0246_BHH5F5BBXY_ATATGGAT-CTGTATTA_S26_L007_R1_001.fastq.gz 4515297792 FASTQ NA d631702e-a9e8-428f-94f6-af371554432e 415ee39c97237621ff3362fb36348a94 NA Solid Tissue Normal C3L-04868.RNA-Seq.R1.T C3L-04868 LSCC RNA-Seq tumor CPT0252940009 200428_UNC31-K00269_0276_BHH5TMBBXY_CTTGGTAT-CCAAGTCC_S11_L003_R1_001.fastq.gz 3691927643 FASTQ NA ca162531-b8ee-4f2d-9e6b-1b62145949d4 e414b3abe16d769d1ef931d0b761b653 NA Primary Tumor C3L-04868.RNA-Seq.R2.A C3L-04868 LSCC RNA-Seq tissue_normal CPT0252960006 200505_UNC32-K00270_0246_BHH5F5BBXY_ATATGGAT-CTGTATTA_S26_L007_R2_001.fastq.gz 5456454667 FASTQ NA b3cb045f-cbee-4b2b-a2b7-b9240a36b6b5 ddb2b811332f65df3927e030ff3f55a6 NA Solid Tissue Normal C3L-04868.RNA-Seq.R2.T C3L-04868 LSCC RNA-Seq tumor CPT0252940009 200428_UNC31-K00269_0276_BHH5TMBBXY_CTTGGTAT-CCAAGTCC_S11_L003_R2_001.fastq.gz 4102057523 FASTQ NA ef34ca3b-b988-42ce-afb5-6c263eaf3e20 0cc17af699af383f132701cda1658ce0 NA Primary Tumor C3L-04868.WGS.N C3L-04868 LSCC WGS blood_normal CPT0253060002 CPT0253060002.WholeGenome.RP-2158.bam 23500774792 BAM NA 9ca33398-5326-4ee7-9909-9a76de2d2683 37f9c2c350375dea3326b87fe1cb5cf2 hg19 Blood Derived Normal +C3L-04868.WGS.N.hg38 C3L-04868 LSCC WGS blood_normal CPT0253060002 391d5226-dbaa-4631-961b-cc74dfb50e18_wgs_gdc_realn.bam 69484426572 BAM NA ddc24ca0-210e-492c-bd82-a8896da3c6a1 a24b10c816b908ae9b66b0c4af7c8754 hg38 Blood Derived Normal C3L-04868.WGS.T C3L-04868 LSCC WGS tumor CPT0252940006 CPT0252940006.WholeGenome.RP-2158.bam 23172859578 BAM NA caec68e3-a988-41fe-8dc4-05c366488121 4614ff3a75f78d1ce1fd2e2b13a2b30d hg19 Primary Tumor +C3L-04868.WGS.T.hg38 C3L-04868 LSCC WGS tumor CPT0252940006 43603349-f8cc-43ba-b8ce-6c6662369372_wgs_gdc_realn.bam 67272381958 BAM NA be8f3dad-edd3-4543-8f20-ed43e68d8186 b5de721ac27de353fc74726a9c07a6ae hg38 Primary Tumor C3L-04868.WXS.A C3L-04868 LSCC WXS tissue_normal CPT0252960009 CPT0252960009.WholeExome.RP-1303.bam 18743101513 BAM NA 69133439-edb8-4013-b444-d766796ce35c 14a64ca2e064684fb7048fc099df6843 hg19 Solid Tissue Normal C3L-04868.WXS.N C3L-04868 LSCC WXS blood_normal CPT0253060002 CPT0253060002.WholeExome.RP-1303.bam 24951127155 BAM NA 2491ecfb-6336-4fa0-b5eb-581b588495d8 2d2b560698b551be71e14e1dd9d0a79f hg19 Blood Derived Normal +C3L-04868.WXS.T C3L-04868 LSCC WXS tumor CPT0252940006 CPT0252940006.WholeExome.RP-1303.bam 33625447274 BAM NA 30eddb31-76cc-4c0b-8056-b03330a09caf 6d1bb56b0ec5aa759a5560d88f93c425 hg19 Primary Tumor C3L-04871.MethArray.Green.A C3L-04871 LSCC Methylation Array tissue_normal CPT0269330006 204367470124_R06C01_Grn.idat 13677880 IDAT Green 0b4175c0-2ab7-49fb-a533-7024a82ef2b1 16733685c6ac610279effb19006b63c6 NA Solid Tissue Normal C3L-04871.MethArray.Green.T C3L-04871 LSCC Methylation Array tumor CPT0269290006 204372030014_R02C01_Grn.idat 13677895 IDAT Green 32751113-f246-4791-800e-c0caec030a00 a90e576d60cd31ebaba1d8fa51ed7db1 NA Primary Tumor C3L-04871.MethArray.Red.A C3L-04871 LSCC Methylation Array tissue_normal CPT0269330006 204367470124_R06C01_Red.idat 13677880 IDAT Red ceef0ca1-63c8-476d-9997-7e8c0ba9151a 64426b4cd63b60f22d0fd9d935f7489e NA Solid Tissue Normal C3L-04871.MethArray.Red.T C3L-04871 LSCC Methylation Array tumor CPT0269290006 204372030014_R02C01_Red.idat 13677895 IDAT Red f563850b-462f-491b-8751-b39eed7af436 6803fe7126965b7fe21671854033385f NA Primary Tumor C3L-04871.miRNA-Seq.A C3L-04871 LSCC miRNA-Seq tissue_normal CPT0269330009 200513_UNC31-K00269_0278_BHH7Y7BBXY_GTCCGC_S18_L007_R1_001.unaln.bam 205922092 BAM NA 7c17aea3-17e9-46a0-b752-a0567717d3a8 00f8c1f363b9eb0de447cfca7ed5a86b NA Solid Tissue Normal +C3L-04871.miRNA-Seq.A.hg38 C3L-04871 LSCC miRNA-Seq tissue_normal CPT0269330009 16ed3190-9dda-495c-9a6d-dc8a828f90cc_mirnaseq_gdc_realn.bam 230850515 BAM NA b6000134-a5e8-4077-b0ec-b1cc2873261b b123983d7b9a6d7d8ea15f392c27c4fc hg38 Solid Tissue Normal C3L-04871.miRNA-Seq.T C3L-04871 LSCC miRNA-Seq tumor CPT0269290009 200224_UNC31-K00269_0267_AHC722BBXY_CCGTCC_S16_L006_R1_001.unaln.bam 234950644 BAM NA 34936c80-5618-4d8a-90d3-9b5f7bc41058 011ad2bcce7cf2d36eb8fbd22b0c86e2 NA Primary Tumor +C3L-04871.miRNA-Seq.T.hg38 C3L-04871 LSCC miRNA-Seq tumor CPT0269290009 24271d4a-6e19-46f7-8245-4d6400a9d39f_mirnaseq_gdc_realn.bam 262124518 BAM NA 04f16660-d92f-412e-8527-c062f7de85b7 8eba84ab61d26e91d518c77fd21dbe5b hg38 Primary Tumor C3L-04871.RNA-Seq.R1.A C3L-04871 LSCC RNA-Seq tissue_normal CPT0269330009 200505_UNC31-K00269_0277_AHGFKNBBXY_GTGTCGGA-GCTTGCGC_S19_L005_R1_001.fastq.gz 3538087308 FASTQ NA b37be0c1-1600-4417-bd99-db6225ce1526 0ae263c0b027ddff20d1a343a0af83ef NA Solid Tissue Normal C3L-04871.RNA-Seq.R1.T C3L-04871 LSCC RNA-Seq tumor CPT0269290009 200428_UNC32-K00270_0243_AHG3Y3BBXY_CCATTCGA-GTTGTCCG_S32_L008_R1_001.fastq.gz 3857917556 FASTQ NA bcc382c1-29b4-4989-918f-69976c6a71ad 584eb0bff9ea3bde553a0f5178e7b032 NA Primary Tumor C3L-04871.RNA-Seq.R2.A C3L-04871 LSCC RNA-Seq tissue_normal CPT0269330009 200505_UNC31-K00269_0277_AHGFKNBBXY_GTGTCGGA-GCTTGCGC_S19_L005_R2_001.fastq.gz 4032901461 FASTQ NA 79e8deb7-9e77-452c-93ce-558f96c4c755 57e4c7cd03a0e317df5a7a7f71edaac0 NA Solid Tissue Normal C3L-04871.RNA-Seq.R2.T C3L-04871 LSCC RNA-Seq tumor CPT0269290009 200428_UNC32-K00270_0243_AHG3Y3BBXY_CCATTCGA-GTTGTCCG_S32_L008_R2_001.fastq.gz 4158031134 FASTQ NA 04cf2d38-a9fb-413a-b32a-15cfa33a2166 e9dddea653ff233157ff187040ab7887 NA Primary Tumor C3L-04871.WGS.N C3L-04871 LSCC WGS blood_normal CPT0269420002 CPT0269420002.WholeGenome.RP-2158.bam 26218863830 BAM NA 2045a7d4-81e4-4716-ad5f-831917e388a7 0ef8c627e8d0301044c7fac0eb346923 hg19 Blood Derived Normal +C3L-04871.WGS.N.hg38 C3L-04871 LSCC WGS blood_normal CPT0269420002 a2db28ad-4a19-4289-bb64-24390da5be1e_wgs_gdc_realn.bam 78200378403 BAM NA e78b9def-1b4a-4c79-a3bf-0408441713a6 d06ffc1eb9aebe047c60e033f3fa6784 hg38 Blood Derived Normal C3L-04871.WGS.T C3L-04871 LSCC WGS tumor CPT0269290006 CPT0269290006.WholeGenome.RP-2158.bam 28066513578 BAM NA 35033de2-00a5-40ee-9d1e-032e90fe1014 e456c88ec73fa83624bc1d7e82dfe6cf hg19 Primary Tumor +C3L-04871.WGS.T.hg38 C3L-04871 LSCC WGS tumor CPT0269290006 066c9bba-638b-4ffe-85ff-363bfd12f2de_wgs_gdc_realn.bam 81095957935 BAM NA 002259e0-1438-474e-9b3b-ecda15bfd01f 662ca7fe7688bf537e13cfa3fdbcd040 hg38 Primary Tumor C3L-04871.WXS.A C3L-04871 LSCC WXS tissue_normal CPT0269330006 CPT0269330006.WholeExome.RP-1303.bam 27343100608 BAM NA 49c31e44-7568-4eba-928c-64735b4b4eb3 d4844c35a79aa281c908d5d154865768 hg19 Solid Tissue Normal C3L-04871.WXS.N C3L-04871 LSCC WXS blood_normal CPT0269420002 CPT0269420002.WholeExome.RP-1303.bam 22611642099 BAM NA a4da1c12-7b9e-4db7-97df-d9cd1801ba8b 81aaaec6566852fabbcf47139c9bbba5 hg19 Blood Derived Normal +C3L-04871.WXS.T C3L-04871 LSCC WXS tumor CPT0269290006 CPT0269290006.WholeExome.RP-1303.bam 41753232816 BAM NA 4937d0aa-f7c1-4a39-8e5b-55bbc9cdd16b 7c1c91f26b280ab576c64cf68725fa7b hg19 Primary Tumor C3L-04872.MethArray.Green.A C3L-04872 LSCC Methylation Array tissue_normal CPT0268240006 204372030076_R08C01_Grn.idat 13677890 IDAT Green f0a087f3-8ee0-46b7-ac33-1e46873d58fb a823f5f5d5df942f7e89b7a3cf513928 NA Solid Tissue Normal C3L-04872.MethArray.Green.T C3L-04872 LSCC Methylation Array tumor CPT0268190006 204367490061_R06C01_Grn.idat 13677885 IDAT Green e7e6ed24-c0c6-4a79-805d-059682bece04 eae61a4d4db264ef6db9dfa74033e089 NA Primary Tumor C3L-04872.MethArray.Red.A C3L-04872 LSCC Methylation Array tissue_normal CPT0268240006 204372030076_R08C01_Red.idat 13677890 IDAT Red 63419a6f-57ee-4f71-9deb-ab7a9bf0c2fc 2b2bbf474399e251cee9c4c0b6d919dd NA Solid Tissue Normal C3L-04872.MethArray.Red.T C3L-04872 LSCC Methylation Array tumor CPT0268190006 204367490061_R06C01_Red.idat 13677885 IDAT Red 55328ff0-7e0c-4919-9b55-7c7cb8fe0142 c4c3b56ed7c4abda6e2692fff2b57b6e NA Primary Tumor C3L-04872.miRNA-Seq.A C3L-04872 LSCC miRNA-Seq tissue_normal CPT0268240009 200513_UNC31-K00269_0278_BHH7Y7BBXY_GTAGAG_S17_L007_R1_001.unaln.bam 224440633 BAM NA 501d0a5e-e285-471a-9c77-458a48142680 b3563494f3bdcc63f095032bc37d5a0e NA Solid Tissue Normal +C3L-04872.miRNA-Seq.A.hg38 C3L-04872 LSCC miRNA-Seq tissue_normal CPT0268240009 c65cc1b1-fbd9-4ca9-82b6-ceb5e617158c_mirnaseq_gdc_realn.bam 249589107 BAM NA 313e161e-b66f-4b25-a4a4-d6fd4fb15fb8 59fcd8b260654e7027c3c45f719d950e hg38 Solid Tissue Normal C3L-04872.miRNA-Seq.T C3L-04872 LSCC miRNA-Seq tumor CPT0268190009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CACGAT_S31_L008_R1_001.unaln.bam 213095930 BAM NA 2b967150-a242-4bd8-bcbf-dde773f68376 d111fc708b724e2ebc10b8a5de7210fe NA Primary Tumor +C3L-04872.miRNA-Seq.T.hg38 C3L-04872 LSCC miRNA-Seq tumor CPT0268190009 7e501903-e1f7-4199-be84-95edea9c5a57_mirnaseq_gdc_realn.bam 237597097 BAM NA 977e92f0-0ee0-4272-b2a7-b306862a4129 7b361a2438dd52e8b2fab45a192b9da2 hg38 Primary Tumor C3L-04872.RNA-Seq.R1.A C3L-04872 LSCC RNA-Seq tissue_normal CPT0268240009 200505_UNC31-K00269_0277_AHGFKNBBXY_ACACTAAG-ATCCATAT_S17_L005_R1_001.fastq.gz 4349949102 FASTQ NA 8655c5ea-5ef9-42e0-bee0-9731723f1c28 b17897a7868704dabfb9af33c1d6dd2c NA Solid Tissue Normal C3L-04872.RNA-Seq.R1.T C3L-04872 LSCC RNA-Seq tumor CPT0268190009 200505_UNC31-K00269_0277_AHGFKNBBXY_ACAGGCGC-CTCTGCCT_S29_L008_R1_001.fastq.gz 3698420557 FASTQ NA 94f914c3-18e6-41d0-b4d8-35d7e99cddc9 8c15acd560b7c9773ebb3c8dcc9b1e4c NA Primary Tumor C3L-04872.RNA-Seq.R2.A C3L-04872 LSCC RNA-Seq tissue_normal CPT0268240009 200505_UNC31-K00269_0277_AHGFKNBBXY_ACACTAAG-ATCCATAT_S17_L005_R2_001.fastq.gz 4947695883 FASTQ NA a28cea4c-f0f3-407c-a8ed-34f29aae8a99 4126da6ba4133a155b16f5a857e8f280 NA Solid Tissue Normal C3L-04872.RNA-Seq.R2.T C3L-04872 LSCC RNA-Seq tumor CPT0268190009 200505_UNC31-K00269_0277_AHGFKNBBXY_ACAGGCGC-CTCTGCCT_S29_L008_R2_001.fastq.gz 4217739880 FASTQ NA aca625af-fd49-4223-a531-7018beea2e58 606325e5950b21613123e0a2ca2abd97 NA Primary Tumor C3L-04872.WGS.N C3L-04872 LSCC WGS blood_normal CPT0268330002 CPT0268330002.WholeGenome.RP-2158.bam 34651736800 BAM NA f73aff23-b6ee-462f-8f55-b95235fff974 50bb5a25030e3df47ef397d70caefbe5 hg19 Blood Derived Normal +C3L-04872.WGS.N.hg38 C3L-04872 LSCC WGS blood_normal CPT0268330002 684ec18f-3d8f-4bfd-88d9-264ebaf87fa4_wgs_gdc_realn.bam 105158711822 BAM NA 1833b881-3ebe-46be-adfe-bffa4185cddf 10625140854449396bab971776ade5e0 hg38 Blood Derived Normal C3L-04872.WGS.T C3L-04872 LSCC WGS tumor CPT0268190006 CPT0268190006.WholeGenome.RP-2158.bam 24981323028 BAM NA 4dbf0932-423f-4b0e-ad6a-0e7885f1e507 d4a679671e2a5526eb3688094fc9403f hg19 Primary Tumor +C3L-04872.WGS.T.hg38 C3L-04872 LSCC WGS tumor CPT0268190006 36c2492a-a296-4bff-9e6e-3e00aae2dc2b_wgs_gdc_realn.bam 76238037119 BAM NA 3e40b43b-5757-40d7-a5a2-02210f457a40 9c5f9b80eaf35b8362ae473ff7cba289 hg38 Primary Tumor +C3L-04872.WXS.A C3L-04872 LSCC WXS tissue_normal CPT0268240006 CPT0268240006.WholeExome.RP-1303.bam 39055575442 BAM NA 1724591c-1dc7-4ebf-b7ce-12776f707fd1 c02781f978978717126752faf14a473a hg19 Solid Tissue Normal C3L-04872.WXS.N C3L-04872 LSCC WXS blood_normal CPT0268330002 CPT0268330002.WholeExome.RP-1303.bam 23255592628 BAM NA 86fd29e2-d1be-4666-ab6a-4b73b590920b b4687deb492100cd984565593562ebcd hg19 Blood Derived Normal +C3L-04872.WXS.T C3L-04872 LSCC WXS tumor CPT0268190006 CPT0268190006.WholeExome.RP-1303.bam 18196315726 BAM NA 9862a218-91e0-4548-bbd2-744ac818d59a 6b1ea64fb5bada653fa6b23c638220ab hg19 Primary Tumor C3L-04873.MethArray.Green.A C3L-04873 LSCC Methylation Array tissue_normal CPT0267860006 204372030164_R07C01_Grn.idat 13677880 IDAT Green cbd5359b-759e-4c2f-be90-1169ddd10daa 403b6cd4c8615832ed25f867545e535a NA Solid Tissue Normal C3L-04873.MethArray.Green.T C3L-04873 LSCC Methylation Array tumor CPT0267850006 204372030085_R05C01_Grn.idat 13677880 IDAT Green c41bb0d7-3b23-45b3-beaa-ed6f59b4a8ed 8637208cfaa59b5565cc51400829c0ee NA Primary Tumor C3L-04873.MethArray.Red.A C3L-04873 LSCC Methylation Array tissue_normal CPT0267860006 204372030164_R07C01_Red.idat 13677880 IDAT Red b3cae102-a807-4535-91ed-d0d6666f8582 4fac9e0552c37f75b0c55d12de800a69 NA Solid Tissue Normal C3L-04873.MethArray.Red.T C3L-04873 LSCC Methylation Array tumor CPT0267850006 204372030085_R05C01_Red.idat 13677880 IDAT Red 7bceb29c-ce0e-4a25-9471-a9b112629755 66e91793143b81fec70c10e690d0be5f NA Primary Tumor C3L-04873.miRNA-Seq.A C3L-04873 LSCC miRNA-Seq tissue_normal CPT0267860009 200513_UNC31-K00269_0278_BHH7Y7BBXY_ATGTCA_S6_L007_R1_001.unaln.bam 215073873 BAM NA ccc64fd0-9119-4e84-b0b7-badc0fcc2091 839ec656db3796eda3e83373fde871f4 NA Solid Tissue Normal +C3L-04873.miRNA-Seq.A.hg38 C3L-04873 LSCC miRNA-Seq tissue_normal CPT0267860009 817185b0-cd61-48f5-ba54-f3717fa884ba_mirnaseq_gdc_realn.bam 243528811 BAM NA da53d6bc-3f59-4518-8a4b-177b0a29823c 5c75b6789e87a2be0c8b0ccf89686c59 hg38 Solid Tissue Normal C3L-04873.miRNA-Seq.T C3L-04873 LSCC miRNA-Seq tumor CPT0267850009 200224_UNC31-K00269_0267_AHC722BBXY_AGTTCC_S14_L006_R1_001.unaln.bam 199360917 BAM NA e31a13b4-02da-42cd-880b-f4149178dc5d c481f65fae8904d031e6b531c9794824 NA Primary Tumor +C3L-04873.miRNA-Seq.T.hg38 C3L-04873 LSCC miRNA-Seq tumor CPT0267850009 7a2c99b9-233b-4830-bdcd-657f3688c4d5_mirnaseq_gdc_realn.bam 224099379 BAM NA 3317d158-0494-455b-a093-71a591886ad3 16679dec31515c207e57a5e458ac198a hg38 Primary Tumor C3L-04873.RNA-Seq.R1.A C3L-04873 LSCC RNA-Seq tissue_normal CPT0267860009 200505_UNC31-K00269_0277_AHGFKNBBXY_TTGCCTAG-ACCACTTA_S16_L004_R1_001.fastq.gz 3267021647 FASTQ NA 4f261355-af5a-4fc3-845b-deee97490d06 9c998163d8b3500a9a30e9deba5f9970 NA Solid Tissue Normal C3L-04873.RNA-Seq.R1.T C3L-04873 LSCC RNA-Seq tumor CPT0267850009 200428_UNC32-K00270_0243_AHG3Y3BBXY_TAAGGTCA-TGTCGTAG_S30_L008_R1_001.fastq.gz 4118044352 FASTQ NA 20817190-6ba3-46e2-97b8-3524fb0f249d c62e59b11ec933fbab678c77f6fc7f3f NA Primary Tumor C3L-04873.RNA-Seq.R2.A C3L-04873 LSCC RNA-Seq tissue_normal CPT0267860009 200505_UNC31-K00269_0277_AHGFKNBBXY_TTGCCTAG-ACCACTTA_S16_L004_R2_001.fastq.gz 3661427471 FASTQ NA 5bfe4050-1028-4139-9fa0-0de52e10513f 8e290353c7c553f20a3c4d1dc99d73cb NA Solid Tissue Normal C3L-04873.RNA-Seq.R2.T C3L-04873 LSCC RNA-Seq tumor CPT0267850009 200428_UNC32-K00270_0243_AHG3Y3BBXY_TAAGGTCA-TGTCGTAG_S30_L008_R2_001.fastq.gz 4391222005 FASTQ NA a0f52148-128b-417a-bc26-eaff29f1ba80 c83c95266db04107e4e5eddf3da6bb96 NA Primary Tumor C3L-04873.WGS.N C3L-04873 LSCC WGS blood_normal CPT0267970002 CPT0267970002.WholeGenome.RP-2158.bam 27770798027 BAM NA 6e9b251f-aac4-4ca8-8aa2-94939f3944c9 398f0810d4e79f56d90037d662c34fb3 hg19 Blood Derived Normal +C3L-04873.WGS.N.hg38 C3L-04873 LSCC WGS blood_normal CPT0267970002 82f03f91-8421-4e4c-a257-2bde3ae9ec4a_wgs_gdc_realn.bam 83761394148 BAM NA 273c5dee-0424-4279-9eb2-fdd9b5b6d9ec 92b40d5aba4838c72b3d53d81b53c809 hg38 Blood Derived Normal C3L-04873.WGS.T C3L-04873 LSCC WGS tumor CPT0267850006 CPT0267850006.WholeGenome.RP-2158.bam 23683876538 BAM NA 2493af4b-02d6-401b-b65d-0e62639e0232 0f2f1db9acfa8bf04af271e65da06234 hg19 Primary Tumor +C3L-04873.WGS.T.hg38 C3L-04873 LSCC WGS tumor CPT0267850006 04f1ed3d-fb02-4257-ac35-bb8607019cce_wgs_gdc_realn.bam 70441640431 BAM NA aff9f748-72c3-45fe-b67b-aac0fdcb92e4 8506b3a0ce05d0cedc1580d27f78577a hg38 Primary Tumor C3L-04873.WXS.A C3L-04873 LSCC WXS tissue_normal CPT0267860006 CPT0267860006.WholeExome.RP-1303.bam 22379338179 BAM NA d8b3c54e-dd10-46a7-a4ee-b0e6f0a938c4 2180424896ab482d40d884950ac2f034 hg19 Solid Tissue Normal C3L-04873.WXS.N C3L-04873 LSCC WXS blood_normal CPT0267970002 CPT0267970002.WholeExome.RP-1303.bam 18720837432 BAM NA facf7952-5290-4a3f-bb0c-fc860c54b8ab beeeb76c35b6ed4a83715802280933b8 hg19 Blood Derived Normal C3L-04873.WXS.T C3L-04873 LSCC WXS tumor CPT0267850006 CPT0267850006.WholeExome.RP-1303.bam 23833247155 BAM NA d0b36001-fc8e-45bd-9d06-95da96158263 7d48afbf8d5e276613d9624140345e6c hg19 Primary Tumor @@ -13976,13 +14200,17 @@ C3L-04874.MethArray.Green.T C3L-04874 LSCC Methylation Array tumor CPT0268010006 C3L-04874.MethArray.Red.A C3L-04874 LSCC Methylation Array tissue_normal CPT0268060006 204367470124_R07C01_Red.idat 13677880 IDAT Red ada4d209-2f1b-450d-aea0-e2d855df5c19 50cf7484e5411bb98294f76126b18828 NA Solid Tissue Normal C3L-04874.MethArray.Red.T C3L-04874 LSCC Methylation Array tumor CPT0268010006 204367460011_R05C01_Red.idat 13677880 IDAT Red 97f0fb00-8344-45bb-bead-69f4b60dc1f7 cdea31e0e857079d40218bd68b429068 NA Primary Tumor C3L-04874.miRNA-Seq.A C3L-04874 LSCC miRNA-Seq tissue_normal CPT0268060009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CCGTCC_S8_L007_R1_001.unaln.bam 203423638 BAM NA 8c9ce3a9-d399-4b3a-a415-e3e5b7c4a5d8 de078394ed671d57edbd7118a533811b NA Solid Tissue Normal +C3L-04874.miRNA-Seq.A.hg38 C3L-04874 LSCC miRNA-Seq tissue_normal CPT0268060009 f4176045-f3a0-411d-b198-72175e63b5ba_mirnaseq_gdc_realn.bam 228145568 BAM NA 9b2c4a53-a17e-40cd-8c8f-750e5bd944ea 558ad09dc1760b20b187aed69511551e hg38 Solid Tissue Normal C3L-04874.miRNA-Seq.T C3L-04874 LSCC miRNA-Seq tumor CPT0268010009 200224_UNC31-K00269_0267_AHC722BBXY_ATGTCA_S15_L006_R1_001.unaln.bam 257877724 BAM NA a18a1b5d-245e-469d-951e-65f7c1bca04d ec123fc307a7869a3e6790518e955033 NA Primary Tumor +C3L-04874.miRNA-Seq.T.hg38 C3L-04874 LSCC miRNA-Seq tumor CPT0268010009 9de2d273-d6e7-47a0-a628-eb6bc9b3a2e0_mirnaseq_gdc_realn.bam 280343130 BAM NA b978c3f3-4377-4420-ae18-cbb221ae8502 8142724d71d80f152e7e49b22899e4ac hg38 Primary Tumor C3L-04874.RNA-Seq.R1.A C3L-04874 LSCC RNA-Seq tissue_normal CPT0268060009 200505_UNC31-K00269_0277_AHGFKNBBXY_CCATTCGA-GTTGTCCG_S13_L004_R1_001.fastq.gz 4590335158 FASTQ NA 7742eec6-bdb8-4f41-8397-ef82eadf8e7f 1654e5b234ed531a733e6a75e8653c6e NA Solid Tissue Normal C3L-04874.RNA-Seq.R1.T C3L-04874 LSCC RNA-Seq tumor CPT0268010009 200428_UNC32-K00270_0243_AHG3Y3BBXY_TTGCCTAG-ACCACTTA_S31_L008_R1_001.fastq.gz 3696908014 FASTQ NA 88ca160f-a81f-4bef-9f80-13517f1e6b75 a8ce459b2c7aae68d8f87dc84ded8293 NA Primary Tumor C3L-04874.RNA-Seq.R2.A C3L-04874 LSCC RNA-Seq tissue_normal CPT0268060009 200505_UNC31-K00269_0277_AHGFKNBBXY_CCATTCGA-GTTGTCCG_S13_L004_R2_001.fastq.gz 5111805431 FASTQ NA 3747b899-498f-45a5-8c6f-684299021505 c64c58b363303c763a4ca4b4fe9d6bb4 NA Solid Tissue Normal C3L-04874.RNA-Seq.R2.T C3L-04874 LSCC RNA-Seq tumor CPT0268010009 200428_UNC32-K00270_0243_AHG3Y3BBXY_TTGCCTAG-ACCACTTA_S31_L008_R2_001.fastq.gz 4002016917 FASTQ NA 1b6e6435-3038-41a9-9faf-683d6e37dbfe c2badd236e84c6b15149af5ae0387a05 NA Primary Tumor C3L-04874.WGS.N C3L-04874 LSCC WGS blood_normal CPT0268150002 CPT0268150002.WholeGenome.RP-2158.bam 26957184911 BAM NA ef812784-db07-40be-b8fa-0b8ff7d1dba9 b5a486deef8bfb32d1b10bab88a153b1 hg19 Blood Derived Normal +C3L-04874.WGS.N.hg38 C3L-04874 LSCC WGS blood_normal CPT0268150002 953cc737-9263-4e67-be03-67fe6d20bb08_wgs_gdc_realn.bam 83536921005 BAM NA a3c24b09-97d6-4f8e-a53a-08976f7312a7 c773fa2917d68b7f602b34a05be6503a hg38 Blood Derived Normal C3L-04874.WGS.T C3L-04874 LSCC WGS tumor CPT0268010006 CPT0268010006.WholeGenome.RP-2158.bam 26810039619 BAM NA cf1029b8-5e50-4b2d-98d9-33ff5d24745d 0632651113768137e8dac034e96b2300 hg19 Primary Tumor +C3L-04874.WGS.T.hg38 C3L-04874 LSCC WGS tumor CPT0268010006 4d122972-e702-4224-9825-9d97013cac46_wgs_gdc_realn.bam 79090522046 BAM NA 09d88d3e-7e17-4371-b1f6-0f9627d89f4f 63a75d52421341a8027aacc5384d8e2e hg38 Primary Tumor C3L-04874.WXS.A C3L-04874 LSCC WXS tissue_normal CPT0268060006 CPT0268060006.WholeExome.RP-1303.bam 25247341808 BAM NA 064ebb6e-ab76-4a63-ab75-2dcab1676a33 b7989ba8441b6c5275020ef3ce6a9873 hg19 Solid Tissue Normal C3L-04874.WXS.N C3L-04874 LSCC WXS blood_normal CPT0268150002 CPT0268150002.WholeExome.RP-1303.bam 29016340716 BAM NA 15c5c425-5dfc-4dbb-8afd-cfd33714274b fa26574e25c787f0ee162b897a1c0840 hg19 Blood Derived Normal C3L-04874.WXS.T C3L-04874 LSCC WXS tumor CPT0268010006 CPT0268010006.WholeExome.RP-1303.bam 22456291052 BAM NA 5825af56-076b-4c97-a001-1d7c72f38a0d fb8339ac8e0e95f48764be3ba1b713aa hg19 Primary Tumor @@ -13991,40 +14219,55 @@ C3L-04878.MethArray.Green.T C3L-04878 LSCC Methylation Array tumor CPT0255240006 C3L-04878.MethArray.Red.A C3L-04878 LSCC Methylation Array tissue_normal CPT0255260006 204367460011_R07C01_Red.idat 13677880 IDAT Red c0a8ab19-6dbf-4b37-ae52-bd8625e50a4f 1a56388ee8cbac99cfcb2046fe77e4ae NA Solid Tissue Normal C3L-04878.MethArray.Red.T C3L-04878 LSCC Methylation Array tumor CPT0255240006 204367490057_R06C01_Red.idat 13677905 IDAT Red ec74d8db-dc59-4593-85c3-677473ee06d8 624b794928c5747742c47ad8acc2b98c NA Primary Tumor C3L-04878.miRNA-Seq.A C3L-04878 LSCC miRNA-Seq tissue_normal CPT0255260009 200513_UNC31-K00269_0278_BHH7Y7BBXY_ACAGTG_S1_L007_R1_001.unaln.bam 252119796 BAM NA d209d425-5683-4d28-9da6-234da87b4398 0995ee9d0ecdd03b5dd8180597721bcc NA Solid Tissue Normal +C3L-04878.miRNA-Seq.A.hg38 C3L-04878 LSCC miRNA-Seq tissue_normal CPT0255260009 f47c07e7-6d7e-4c19-90c8-802b2d92c1c8_mirnaseq_gdc_realn.bam 279595817 BAM NA f861d1d9-e571-4661-83f3-37ff53d7c8c5 49ab6ea70304ae84e2c377574c1133b8 hg38 Solid Tissue Normal C3L-04878.miRNA-Seq.T C3L-04878 LSCC miRNA-Seq tumor CPT0255240009 200513_UNC31-K00269_0278_BHH7Y7BBXY_GGTAGC_S16_L007_R1_001.unaln.bam 203902828 BAM NA 3d90aa3c-b946-4a81-84cd-224d597c8d43 c35f4a41e708c9e80cb1ecb503bd55c2 NA Primary Tumor +C3L-04878.miRNA-Seq.T.hg38 C3L-04878 LSCC miRNA-Seq tumor CPT0255240009 c9ec5f61-33a1-409a-b74b-3024265552bd_mirnaseq_gdc_realn.bam 228598500 BAM NA e4ead1f4-50b1-4426-930b-774bb96ca2ec cd5e522c1911411cc06dfd5ab06da2f3 hg38 Primary Tumor C3L-04878.RNA-Seq.R1.A C3L-04878 LSCC RNA-Seq tissue_normal CPT0255260009 200505_UNC31-K00269_0277_AHGFKNBBXY_CAACAATG-CTTCACGG_S6_L002_R1_001.fastq.gz 3590768876 FASTQ NA 0eae0b0a-3b86-409a-a7b4-0287abc1e9f0 5865033e8eb0918dc066a6020481d32a NA Solid Tissue Normal C3L-04878.RNA-Seq.R1.T C3L-04878 LSCC RNA-Seq tumor CPT0255240009 200505_UNC31-K00269_0277_AHGFKNBBXY_GTCTACAC-GCCAAGGT_S24_L006_R1_001.fastq.gz 4588674714 FASTQ NA d499e349-70b5-4acb-a097-643e4ceef9c3 d328f1dcc1b51e55b33d31e82ab83dc2 NA Primary Tumor C3L-04878.RNA-Seq.R2.A C3L-04878 LSCC RNA-Seq tissue_normal CPT0255260009 200505_UNC31-K00269_0277_AHGFKNBBXY_CAACAATG-CTTCACGG_S6_L002_R2_001.fastq.gz 4028352591 FASTQ NA eef84db7-0743-4761-be20-4fa8736b4034 4ab20dcf74f24d8a7e02f4341667fbc2 NA Solid Tissue Normal C3L-04878.RNA-Seq.R2.T C3L-04878 LSCC RNA-Seq tumor CPT0255240009 200505_UNC31-K00269_0277_AHGFKNBBXY_GTCTACAC-GCCAAGGT_S24_L006_R2_001.fastq.gz 5160688434 FASTQ NA 61bdea9c-2adf-472d-8f95-85800d2e2ec4 44313257b91cb26a022002e4d1453d73 NA Primary Tumor C3L-04878.WGS.N C3L-04878 LSCC WGS blood_normal CPT0255360002 CPT0255360002.WholeGenome.RP-2158.bam 24848420863 BAM NA 7eb956f8-37a4-4f14-bf28-18d99110c807 ed4ad8bc347fe252985ebb6bad4c7dc3 hg19 Blood Derived Normal +C3L-04878.WGS.N.hg38 C3L-04878 LSCC WGS blood_normal CPT0255360002 9a24adbe-9814-4111-ad5c-be83ee688559_wgs_gdc_realn.bam 73320254134 BAM NA 5d3c329c-f915-45fd-9d44-ab657947b05a b7f7e9a7266fc05f8bca0beed9c0715b hg38 Blood Derived Normal C3L-04878.WGS.T C3L-04878 LSCC WGS tumor CPT0255240006 CPT0255240006.WholeGenome.RP-2158.bam 46451037455 BAM NA a70cacfa-0661-40d9-a4fd-0d912c3355bd aa566aa80c683791e5de7984d2fa3284 hg19 Primary Tumor +C3L-04878.WGS.T.hg38 C3L-04878 LSCC WGS tumor CPT0255240006 6ece0a12-2fd2-48ca-bbce-14090dded31d_wgs_gdc_realn.bam 132044860943 BAM NA 8adc8708-db6d-4478-8f6c-220011c1e560 389f9a9d47175f2c0cde53fa9f96e2e7 hg38 Primary Tumor +C3L-04878.WXS.A C3L-04878 LSCC WXS tissue_normal CPT0255260006 CPT0255260006.WholeExome.RP-1303.bam 38551556852 BAM NA 9b802bb9-2675-483e-9ae8-80dd25226307 0572a907a29f347edc184c02bc44ac76 hg19 Solid Tissue Normal C3L-04878.WXS.N C3L-04878 LSCC WXS blood_normal CPT0255360002 CPT0255360002.WholeExome.RP-1303.bam 21395236546 BAM NA b6ecc3b9-ba2f-40ac-b8de-bbeed107db36 96cfa1b561ebbacd594f18b5914a85c6 hg19 Blood Derived Normal +C3L-04878.WXS.T C3L-04878 LSCC WXS tumor CPT0255240006 CPT0255240006.WholeExome.RP-1303.bam 42223872489 BAM NA 230f486f-d728-4079-bf4b-7d371a8dd486 88ebec1bb61cc63ce419daccee95f444 hg19 Primary Tumor C3L-04880.MethArray.Green.A C3L-04880 LSCC Methylation Array tissue_normal CPT0253480006 204372030079_R08C01_Grn.idat 13677880 IDAT Green 4b951416-a09e-4177-830a-b682ac806b8d 1c3ddf40e940c246f691ac9342ccb498 NA Solid Tissue Normal C3L-04880.MethArray.Green.T C3L-04880 LSCC Methylation Array tumor CPT0253470006 204367470157_R04C01_Grn.idat 13677880 IDAT Green 1337f910-2459-44d9-a9c4-ac40fe7fbfff 3f57c5ad29bd34ccd21d6ba5e0f46c5d NA Primary Tumor C3L-04880.MethArray.Red.A C3L-04880 LSCC Methylation Array tissue_normal CPT0253480006 204372030079_R08C01_Red.idat 13677880 IDAT Red 7b1c87a8-bbbc-439a-87b8-d39cb61e7975 581486f56e46abb062b646274827c0da NA Solid Tissue Normal C3L-04880.MethArray.Red.T C3L-04880 LSCC Methylation Array tumor CPT0253470006 204367470157_R04C01_Red.idat 13677880 IDAT Red 0361a1ad-8a0c-4653-84bb-6d01e89adaa1 778a64804fdd27609b6ec2e465049d00 NA Primary Tumor C3L-04880.miRNA-Seq.A C3L-04880 LSCC miRNA-Seq tissue_normal CPT0253480009 200513_UNC31-K00269_0278_BHH7Y7BBXY_TCGAAG_S47_L006_R1_001.unaln.bam 240633738 BAM NA 4bff370d-3f48-4070-9d96-e41d5d26f60e 63c14752b83ea58c162a319a847c0ec5 NA Solid Tissue Normal +C3L-04880.miRNA-Seq.A.hg38 C3L-04880 LSCC miRNA-Seq tissue_normal CPT0253480009 7e014f14-93d9-4274-9d22-5c402e23bd92_mirnaseq_gdc_realn.bam 268251774 BAM NA 3947aa35-001f-402c-8554-d29453f93667 daaa854a9aa7949eb853450b286d88b2 hg38 Solid Tissue Normal C3L-04880.miRNA-Seq.T C3L-04880 LSCC miRNA-Seq tumor CPT0253470009 200224_UNC31-K00269_0267_AHC722BBXY_CAACTA_S29_L007_R1_001.unaln.bam 256466083 BAM NA 5dcbcb08-9dec-46ef-a3b6-77094bfc3572 34f2e98831cd827bd67cf28286e342c0 NA Primary Tumor +C3L-04880.miRNA-Seq.T.hg38 C3L-04880 LSCC miRNA-Seq tumor CPT0253470009 df476473-7d60-4a83-8152-8fac3d7c5330_mirnaseq_gdc_realn.bam 281482737 BAM NA 4ff45129-c852-48df-a2c5-aeb976e29ede 052c71bb5dd237c89fe77be53f0d8d18 hg38 Primary Tumor C3L-04880.RNA-Seq.R1.A C3L-04880 LSCC RNA-Seq tissue_normal CPT0253480009 200505_UNC32-K00270_0246_BHH5F5BBXY_GTTCCAAT-AATTCTGC_S32_L008_R1_001.fastq.gz 4395587682 FASTQ NA 1d0e3440-e377-4cf2-b1e1-69b467e581c9 abbbfc30f4efa7cf01c3bcc7eefcc94c NA Solid Tissue Normal C3L-04880.RNA-Seq.R1.T C3L-04880 LSCC RNA-Seq tumor CPT0253470009 200428_UNC31-K00269_0276_BHH5TMBBXY_CCGTGAAG-CAGTGGAT_S13_L004_R1_001.fastq.gz 3271028811 FASTQ NA 3e430357-3552-49c5-a783-44fe28641208 53f04777700eb070116756da3515d8ff NA Primary Tumor C3L-04880.RNA-Seq.R2.A C3L-04880 LSCC RNA-Seq tissue_normal CPT0253480009 200505_UNC32-K00270_0246_BHH5F5BBXY_GTTCCAAT-AATTCTGC_S32_L008_R2_001.fastq.gz 5473367389 FASTQ NA a6622f25-84c9-48e2-bca1-73b5d176648d 7e4cd746a2a61c4d5ddd096c5083b058 NA Solid Tissue Normal C3L-04880.RNA-Seq.R2.T C3L-04880 LSCC RNA-Seq tumor CPT0253470009 200428_UNC31-K00269_0276_BHH5TMBBXY_CCGTGAAG-CAGTGGAT_S13_L004_R2_001.fastq.gz 3513897709 FASTQ NA 607a4186-d2e9-4176-8d0b-4aaaa6d49250 65bec1d735321a8efb0d2a24653da454 NA Primary Tumor C3L-04880.WGS.N C3L-04880 LSCC WGS blood_normal CPT0253590002 CPT0253590002.WholeGenome.RP-2158.bam 26459494415 BAM NA 5da2c091-2d7e-4972-8cc7-c5eab0d39737 a84406b1c4fd86bb0be48311e6a7b972 hg19 Blood Derived Normal +C3L-04880.WGS.N.hg38 C3L-04880 LSCC WGS blood_normal CPT0253590002 aedbe9f5-5a65-4d32-9583-36c12c019c25_wgs_gdc_realn.bam 77856755373 BAM NA 4b24c115-f177-402c-9301-cd422a5aad9a 531d295b1f5e8b661193257fa9810047 hg38 Blood Derived Normal C3L-04880.WGS.T C3L-04880 LSCC WGS tumor CPT0253470006 CPT0253470006.WholeGenome.RP-2158.bam 19965291697 BAM NA 4c8261c7-0626-4d67-8000-c7d0b5543be0 3acb6e5cc655e78488ad9c56605322d0 hg19 Primary Tumor +C3L-04880.WGS.T.hg38 C3L-04880 LSCC WGS tumor CPT0253470006 4fb41834-716f-4c81-a12e-ec631bd9757e_wgs_gdc_realn.bam 58213704449 BAM NA d9d7bc96-f9b4-49f1-bc4c-a86f23e562de 4f50d29262ed0429b4c4442b2a0538f3 hg38 Primary Tumor C3L-04880.WXS.A C3L-04880 LSCC WXS tissue_normal CPT0253480006 CPT0253480006.WholeExome.RP-1303.bam 33670093953 BAM NA 1e28f14a-c0cc-4c93-b375-cd6897e0c8d5 909d7c2d11ebad719703b55ffd98649a hg19 Solid Tissue Normal +C3L-04880.WXS.N C3L-04880 LSCC WXS blood_normal CPT0253590002 CPT0253590002.WholeExome.RP-1303.bam 22026892288 BAM NA c0e1589c-56f3-4841-85e4-819530ec2f5a 1e86be63fb19405068bbe56f76f08c0b hg19 Blood Derived Normal C3L-04880.WXS.T C3L-04880 LSCC WXS tumor CPT0253470006 CPT0253470006.WholeExome.RP-1303.bam 24731425868 BAM NA e68e4b98-ca9a-40bb-8daa-0d7e6ee55377 fce59fce1ada942f022612f416bf589e hg19 Primary Tumor C3L-04883.MethArray.Green.A C3L-04883 LSCC Methylation Array tissue_normal CPT0253670006 204372030161_R07C01_Grn.idat 13677880 IDAT Green eb10c93c-1e53-4e23-a0f4-2a6f1b9bd6e0 2967e648a705f069091d7ed266ea5f9a NA Solid Tissue Normal C3L-04883.MethArray.Green.T C3L-04883 LSCC Methylation Array tumor CPT0253630006 204372030023_R05C01_Grn.idat 13677895 IDAT Green 1c0d236d-8240-4323-9d76-5b74e2d63f6e e25fa355e2f49edc07fa29b4f9811433 NA Primary Tumor C3L-04883.MethArray.Red.A C3L-04883 LSCC Methylation Array tissue_normal CPT0253670006 204372030161_R07C01_Red.idat 13677880 IDAT Red 3d2fff5d-d63f-4b13-aa89-fac16debd1f5 4d3e5429c779114bfbd822b6f141b0ac NA Solid Tissue Normal C3L-04883.MethArray.Red.T C3L-04883 LSCC Methylation Array tumor CPT0253630006 204372030023_R05C01_Red.idat 13677895 IDAT Red 9f464078-67dd-4ea0-849b-77b326e1cbea 3779dfa4e54f012bab441fbaeaef2987 NA Primary Tumor C3L-04883.miRNA-Seq.A C3L-04883 LSCC miRNA-Seq tissue_normal CPT0253670009 200513_UNC31-K00269_0278_BHH7Y7BBXY_TCGGCA_S48_L006_R1_001.unaln.bam 233582558 BAM NA 226ea2cf-91c8-4430-8a61-84f9baed08c4 56c8ea627888a94f24e227e76bb2d9b9 NA Solid Tissue Normal +C3L-04883.miRNA-Seq.A.hg38 C3L-04883 LSCC miRNA-Seq tissue_normal CPT0253670009 4a33edd1-55fe-4e8a-b18f-ba02099714b3_mirnaseq_gdc_realn.bam 266134817 BAM NA add655c1-aaff-4ae4-840c-d4796386d9d7 6729b1b19a8c1ce825b51affcce55424 hg38 Solid Tissue Normal C3L-04883.miRNA-Seq.T C3L-04883 LSCC miRNA-Seq tumor CPT0253630013 200325_UNC31-K00269_0272_AHHC2NBBXY_TCATTC_S21_L001_R1_001.unaln.bam 172304920 BAM NA b83ed21b-3eca-43e1-8d17-c6ccdea6a9f1 86fb3611d3e48ce15fb1362e615cadc6 NA Primary Tumor +C3L-04883.miRNA-Seq.T.hg38 C3L-04883 LSCC miRNA-Seq tumor CPT0253630013 db271d01-a7f3-4049-a2fd-0fe44a88805b_mirnaseq_gdc_realn.bam 192206320 BAM NA 67633cee-d9c9-4e01-8b5e-b286fdfaf286 afd47a782978b7fb267e7aa659f71f72 hg38 Primary Tumor C3L-04883.RNA-Seq.R1.A C3L-04883 LSCC RNA-Seq tissue_normal CPT0253670009 200505_UNC32-K00270_0246_BHH5F5BBXY_ACCTTGGC-GGCCTCAT_S29_L008_R1_001.fastq.gz 3159378545 FASTQ NA ff5812ee-f6d4-40dd-8c4a-fcf956d9c9aa 9af62120288dfe5d03ec2a7fca0e963d NA Solid Tissue Normal C3L-04883.RNA-Seq.R1.T C3L-04883 LSCC RNA-Seq tumor CPT0253630013 200428_UNC31-K00269_0275_AHGCJVBBXY_TACTCATA-CCTGTGGC_S29_L008_R1_001.fastq.gz 3733715364 FASTQ NA 0b7f7e47-594f-4ad3-b45f-34b2a1666fda 90b674f89607fcb0d1ef01bfe9b0a18b NA Primary Tumor C3L-04883.RNA-Seq.R2.A C3L-04883 LSCC RNA-Seq tissue_normal CPT0253670009 200505_UNC32-K00270_0246_BHH5F5BBXY_ACCTTGGC-GGCCTCAT_S29_L008_R2_001.fastq.gz 4047572137 FASTQ NA 078f549a-e1ee-482c-bf00-eb731eb4f8d1 d546f6243031eca29403fb1f7cd581c5 NA Solid Tissue Normal C3L-04883.RNA-Seq.R2.T C3L-04883 LSCC RNA-Seq tumor CPT0253630013 200428_UNC31-K00269_0275_AHGCJVBBXY_TACTCATA-CCTGTGGC_S29_L008_R2_001.fastq.gz 3864111802 FASTQ NA 1bce6eab-a43b-422e-bc9a-4e6a7f4053c5 1d41b6bcfadc1abce51f3bbf5a9fb473 NA Primary Tumor C3L-04883.WGS.N C3L-04883 LSCC WGS blood_normal CPT0253770002 CPT0253770002.WholeGenome.RP-2158.bam 24553953880 BAM NA d27a522f-e9ea-4d98-a28f-05c27cf76020 106ef1d2ba431041ce861679d574d940 hg19 Blood Derived Normal +C3L-04883.WGS.N.hg38 C3L-04883 LSCC WGS blood_normal CPT0253770002 a759674b-f5b7-4d18-8019-f1538c01206c_wgs_gdc_realn.bam 74370034798 BAM NA 8edd72ad-d390-4eac-b045-89c157968bcb f1e7042d40d03a56f0512804c5c0c9f1 hg38 Blood Derived Normal C3L-04883.WGS.T C3L-04883 LSCC WGS tumor CPT0253630006 CPT0253630006.WholeGenome.RP-2158.bam 28765276823 BAM NA 650e265a-f988-4c91-9451-0a506cd46f38 f196479dc87fc1b31a211195d9608865 hg19 Primary Tumor +C3L-04883.WGS.T.hg38 C3L-04883 LSCC WGS tumor CPT0253630006 3aa9b82b-f84c-4726-b2b4-ada4bf65547c_wgs_gdc_realn.bam 86462965526 BAM NA 824af069-89df-4627-8a57-5a5b826430aa 07001b6620b52f190226180ad5193911 hg38 Primary Tumor C3L-04883.WXS.A C3L-04883 LSCC WXS tissue_normal CPT0253670006 CPT0253670006.WholeExome.RP-1303.bam 21031542775 BAM NA 238fc677-7a9b-4ecf-92e4-966c7af90308 218ce1a4712e4ddfee5c7fb6a9e4c777 hg19 Solid Tissue Normal C3L-04883.WXS.N C3L-04883 LSCC WXS blood_normal CPT0253770002 CPT0253770002.WholeExome.RP-1303.bam 23909458894 BAM NA 9a993c0e-095e-488d-9952-4e7defc71905 0fd84921f266796df691f74256f3ebe5 hg19 Blood Derived Normal C3L-04883.WXS.T C3L-04883 LSCC WXS tumor CPT0253630006 CPT0253630006.WholeExome.RP-1303.bam 24339447151 BAM NA 6e6bf468-52e8-47d8-bb2b-f4a8446a1ee1 be6f7023f7805e33df7914c6ba05ca12 hg19 Primary Tumor @@ -14033,7 +14276,9 @@ C3L-04887.MethArray.Green.T C3L-04887 LSCC Methylation Array tumor CPT0253280006 C3L-04887.MethArray.Red.A C3L-04887 LSCC Methylation Array tissue_normal CPT0253320006 204372030014_R07C01_Red.idat 13677895 IDAT Red 5f1a00c2-23d3-43ae-b607-a8778db0978a 3cfadaa31da0ff8f44800d65bbc44ba8 NA Solid Tissue Normal C3L-04887.MethArray.Red.T C3L-04887 LSCC Methylation Array tumor CPT0253280006 204367470157_R05C01_Red.idat 13677880 IDAT Red e700635f-54f4-4b3b-bee3-3c97c07fd4ea b4c45921626e10a60839935da4b8e18b NA Primary Tumor C3L-04887.miRNA-Seq.A C3L-04887 LSCC miRNA-Seq tissue_normal CPT0253320009 200513_UNC31-K00269_0278_BHH7Y7BBXY_TCCCGA_S46_L006_R1_001.unaln.bam 206102985 BAM NA 126070eb-f4cd-471f-a189-0616ba9d00ae af03efc27168e973546ea09b1f2fdc3b NA Solid Tissue Normal +C3L-04887.miRNA-Seq.A.hg38 C3L-04887 LSCC miRNA-Seq tissue_normal CPT0253320009 d02e77f5-301c-4032-92fc-6778d3683710_mirnaseq_gdc_realn.bam 230248996 BAM NA 1746d937-9061-40c6-a928-2c785267a898 790e76cb186ffd6f499dc74e96c24cb8 hg38 Solid Tissue Normal C3L-04887.miRNA-Seq.T C3L-04887 LSCC miRNA-Seq tumor CPT0253280009 200224_UNC31-K00269_0267_AHC722BBXY_CAAAAG_S28_L007_R1_001.unaln.bam 188271545 BAM NA bba25f7f-a651-49d6-b7f4-4d4d492cf913 772a8cb65e580b4012bb0f7fe926d75a NA Primary Tumor +C3L-04887.miRNA-Seq.T.hg38 C3L-04887 LSCC miRNA-Seq tumor CPT0253280009 208a85fa-664e-44a2-94d5-633762f24e91_mirnaseq_gdc_realn.bam 209568619 BAM NA 739a985e-b451-4803-b9dd-685b85b1688f 24b526083adbdec4d6a497cfe5296cce hg38 Primary Tumor C3L-04887.RNA-Seq.R1.A C3L-04887 LSCC RNA-Seq tissue_normal CPT0253320009 200505_UNC32-K00270_0246_BHH5F5BBXY_GCAATGCA-GGAACGTT_S31_L008_R1_001.fastq.gz 3774059091 FASTQ NA 7f9d157c-47cc-484c-b95d-106872361319 be4a0d2e016cd9eb8f77c8338be80302 NA Solid Tissue Normal C3L-04887.RNA-Seq.R1.T C3L-04887 LSCC RNA-Seq tumor CPT0253280009 200428_UNC31-K00269_0276_BHH5TMBBXY_TCCAACGC-TTGGACTT_S12_L003_R1_001.fastq.gz 3678355601 FASTQ NA c6488efc-f8d4-4787-a5fe-b1d9826b2f1a 2f14616893c8c6fd4da26d599e5c7284 NA Primary Tumor C3L-04887.RNA-Seq.R2.A C3L-04887 LSCC RNA-Seq tissue_normal CPT0253320009 200505_UNC32-K00270_0246_BHH5F5BBXY_GCAATGCA-GGAACGTT_S31_L008_R2_001.fastq.gz 4691084386 FASTQ NA 1fd26213-56e3-4a31-80bb-1a34a7f104f1 920ef785ccfa599db5aeef6511a5561b NA Solid Tissue Normal @@ -14041,6 +14286,7 @@ C3L-04887.RNA-Seq.R2.T C3L-04887 LSCC RNA-Seq tumor CPT0253280009 200428_UNC31-K C3L-04887.WGS.N C3L-04887 LSCC WGS blood_normal CPT0253410002 CPT0253410002.WholeGenome.RP-2158.bam 29189595327 BAM NA a37e2e04-cd19-4797-80c2-28747f6e75a9 758ad934eaef03266808ff39e3d4b564 hg19 Blood Derived Normal C3L-04887.WGS.N C3L-04887 LSCC WGS blood_normal CPT0253410002 CPT0253410002.WholeGenome.RP-2158.bam 29241738931 BAM NA 1aab6bdf-e132-429f-9e7a-f865c216a0c2 ba325d3e9c7f90281ab83aa481a82cbe hg19 Blood Derived Normal C3L-04887.WGS.T C3L-04887 LSCC WGS tumor CPT0253280006 CPT0253280006.WholeGenome.RP-2158.bam 28364211537 BAM NA b4fbe6a1-22e9-4bf3-99ca-b35ec4b43ccd efdf2f451f12008902cf0f79951ce2e5 hg19 Primary Tumor +C3L-04887.WGS.T.hg38 C3L-04887 LSCC WGS tumor CPT0253280006 0651482e-849b-42f0-9be2-ca88eee9c2a3_wgs_gdc_realn.bam 83234656114 BAM NA bc592ed5-c7b8-4882-bd0e-d13a78aed20d 6534da0a77cfa45d535cd95e8d30e101 hg38 Primary Tumor C3L-04887.WXS.A C3L-04887 LSCC WXS tissue_normal CPT0253320006 CPT0253320006.WholeExome.RP-1303.bam 26869120119 BAM NA d5ab7ad5-d536-4876-9b97-1f85576245c7 fe358c0c9d5ca6a0ea5df57adf593697 hg19 Solid Tissue Normal C3L-04887.WXS.N C3L-04887 LSCC WXS blood_normal CPT0253410002 CPT0253410002.WholeExome.RP-1303.bam 25845856122 BAM NA 040ee52f-f34c-4fcd-8117-ddfec80bf026 64cff2b7070b2aac5e74af9db1c42c35 hg19 Blood Derived Normal C3L-04887.WXS.T C3L-04887 LSCC WXS tumor CPT0253280006 CPT0253280006.WholeExome.RP-1303.bam 18822691383 BAM NA d69bc50b-d2d3-46bd-86e9-fcf21b7f8c9a 53182dae6c0057e3c9327e7442134320 hg19 Primary Tumor @@ -14049,13 +14295,17 @@ C3L-04888.MethArray.Green.T C3L-04888 LSCC Methylation Array tumor CPT0254190006 C3L-04888.MethArray.Red.A C3L-04888 LSCC Methylation Array tissue_normal CPT0254220006 204372030127_R07C01_Red.idat 13677880 IDAT Red 946d159c-89b0-4032-b7f5-cdc033b1a9bc d57740e6f84e505eed9aebb38b90e58a NA Solid Tissue Normal C3L-04888.MethArray.Red.T C3L-04888 LSCC Methylation Array tumor CPT0254190006 204372030139_R05C01_Red.idat 13677880 IDAT Red 330e766a-d2ef-413b-a16a-e69762940a5b 51b03d7f6c86f54fba41aa2ecd1f3634 NA Primary Tumor C3L-04888.miRNA-Seq.A C3L-04888 LSCC miRNA-Seq tissue_normal CPT0254220009 200513_UNC31-K00269_0278_BHH7Y7BBXY_TTAGGC_S24_L007_R1_001.unaln.bam 231430370 BAM NA 8b6a465d-3f3d-487b-84e1-780f64e1bb8e 96e147b0aa71f331af2b2455cb193460 NA Solid Tissue Normal +C3L-04888.miRNA-Seq.A.hg38 C3L-04888 LSCC miRNA-Seq tissue_normal CPT0254220009 88c8a8b1-5992-44a9-8a62-a76411009b8b_mirnaseq_gdc_realn.bam 257125033 BAM NA 3f4f6029-2018-43bb-bc0e-6b487cd67e47 4c14b673fc6f1990953110a883e1c646 hg38 Solid Tissue Normal C3L-04888.miRNA-Seq.T C3L-04888 LSCC miRNA-Seq tumor CPT0254190009 200224_UNC31-K00269_0267_AHC722BBXY_CACTCA_S32_L007_R1_001.unaln.bam 234244879 BAM NA 570c32ee-f2e3-4756-92f7-2f3d61086880 35b5a5eca14b69f887c26fb04975c354 NA Primary Tumor +C3L-04888.miRNA-Seq.T.hg38 C3L-04888 LSCC miRNA-Seq tumor CPT0254190009 a24146c7-9a8c-4ef6-b344-9412cdb61cc7_mirnaseq_gdc_realn.bam 262392851 BAM NA ad3dda41-6bbf-4ee6-b407-d2dc926ec6af 158b221b19cbc688f26d75daf3312041 hg38 Primary Tumor C3L-04888.RNA-Seq.R1.A C3L-04888 LSCC RNA-Seq tissue_normal CPT0254220009 200505_UNC31-K00269_0277_AHGFKNBBXY_AACAGGTT-ATACCAAG_S1_L001_R1_001.fastq.gz 3746396808 FASTQ NA 2ee25616-d457-4e76-bebe-3a10ff073b3d 48ce7160ab4d2017ccbb0b04d39f3b15 NA Solid Tissue Normal C3L-04888.RNA-Seq.R1.T C3L-04888 LSCC RNA-Seq tumor CPT0254190009 200428_UNC31-K00269_0276_BHH5TMBBXY_AATGCCTC-TCGATCCA_S16_L004_R1_001.fastq.gz 4704855751 FASTQ NA 29bd9170-cb70-4973-8fbb-7d1ee12d86d2 1cf04d2df19bff694780ba35aeb089b4 NA Primary Tumor C3L-04888.RNA-Seq.R2.A C3L-04888 LSCC RNA-Seq tissue_normal CPT0254220009 200505_UNC31-K00269_0277_AHGFKNBBXY_AACAGGTT-ATACCAAG_S1_L001_R2_001.fastq.gz 4180707908 FASTQ NA eeafd62f-8a54-4036-a906-1de79beffa90 6e59ec4a324e4cefb822479bcb43fbdc NA Solid Tissue Normal C3L-04888.RNA-Seq.R2.T C3L-04888 LSCC RNA-Seq tumor CPT0254190009 200428_UNC31-K00269_0276_BHH5TMBBXY_AATGCCTC-TCGATCCA_S16_L004_R2_001.fastq.gz 5039303678 FASTQ NA 1eab0026-17bc-4e7a-9184-3e0612798272 e027ca8f5298a7bd9cd1ed669230cee9 NA Primary Tumor C3L-04888.WGS.N C3L-04888 LSCC WGS blood_normal CPT0254310002 CPT0254310002.WholeGenome.RP-2158.bam 26253581394 BAM NA b2d8010e-d8a8-48b6-b4f8-dcdc18c41399 51e2b17ee89ed023b1561fc33de59049 hg19 Blood Derived Normal +C3L-04888.WGS.N.hg38 C3L-04888 LSCC WGS blood_normal CPT0254310002 4fb6deda-0533-4e32-9ccb-5e10d36c9ff1_wgs_gdc_realn.bam 76922524747 BAM NA fc9b8c98-999c-4644-8658-7bb34c36513b cd63a1968b9e8e64f9d42c55ce6d2fa5 hg38 Blood Derived Normal C3L-04888.WGS.T C3L-04888 LSCC WGS tumor CPT0254190006 CPT0254190006.WholeGenome.RP-2158.bam 30154002169 BAM NA 50b292ad-31dd-4f70-9efb-05aa968e64dd 61cb9a0ed180463e48811a212e76dc91 hg19 Primary Tumor +C3L-04888.WGS.T.hg38 C3L-04888 LSCC WGS tumor CPT0254190006 c3b26a8b-5ea1-40f1-97c6-b5a07db8d558_wgs_gdc_realn.bam 91240677303 BAM NA 15c27f47-6aef-4abd-adaa-12766157c472 61f758cccc353954a379b91c28d91548 hg38 Primary Tumor C3L-04888.WXS.A C3L-04888 LSCC WXS tissue_normal CPT0254220006 CPT0254220006.WholeExome.RP-1303.bam 20583692172 BAM NA 991df4be-92bc-421c-957f-b55bc1eaf575 f6e3aeeb2fd5721eaebbccd46ebcafb0 hg19 Solid Tissue Normal C3L-04888.WXS.N C3L-04888 LSCC WXS blood_normal CPT0254310002 CPT0254310002.WholeExome.RP-1303.bam 25861636484 BAM NA 21004fe8-9192-46fa-92f0-6959f83b7bab ec6bc30a2c7b44346e768bae8610e434 hg19 Blood Derived Normal C3L-04888.WXS.T C3L-04888 LSCC WXS tumor CPT0254190006 CPT0254190006.WholeExome.RP-1303.bam 29653630464 BAM NA efbee664-9b89-417f-99ed-d8c2708b2dca 48a89c463dd54cb1032feb3269ec1f4a hg19 Primary Tumor @@ -14064,13 +14314,17 @@ C3L-04889.MethArray.Green.T C3L-04889 LSCC Methylation Array tumor CPT0267670006 C3L-04889.MethArray.Red.A C3L-04889 LSCC Methylation Array tissue_normal CPT0267700006 204372030087_R07C01_Red.idat 13677880 IDAT Red 6f66a507-3b1f-4f26-a29f-e650c4a8f4b4 b82b08a634d9f94698f8c986a028c613 NA Solid Tissue Normal C3L-04889.MethArray.Red.T C3L-04889 LSCC Methylation Array tumor CPT0267670006 204367490082_R05C01_Red.idat 13677900 IDAT Red c89bf7e3-0394-4f74-b7b2-72911fe2e7bc ffce9d52f17e3f8e080c659f8df503a9 NA Primary Tumor C3L-04889.miRNA-Seq.A C3L-04889 LSCC miRNA-Seq tissue_normal CPT0267700009 200513_UNC31-K00269_0278_BHH7Y7BBXY_AGTTCC_S4_L007_R1_001.unaln.bam 204001591 BAM NA 9de8bdef-1121-40b5-a804-4596cc33f565 689775963bed915061b28c000da9c9e3 NA Solid Tissue Normal +C3L-04889.miRNA-Seq.A.hg38 C3L-04889 LSCC miRNA-Seq tissue_normal CPT0267700009 2083e07b-b411-4988-aabd-02d3ff33631a_mirnaseq_gdc_realn.bam 228887025 BAM NA 3886a057-c679-40f2-8535-f72fc45dd419 22bef25d33af31745008d5c2cf23348d hg38 Solid Tissue Normal C3L-04889.miRNA-Seq.T C3L-04889 LSCC miRNA-Seq tumor CPT0267670009 200224_UNC31-K00269_0267_AHC722BBXY_AGTCAA_S13_L006_R1_001.unaln.bam 227953235 BAM NA 2262edab-3d16-4cd8-8013-c39abe882f2d b681cef1e992b8eb1a67f657757304ac NA Primary Tumor +C3L-04889.miRNA-Seq.T.hg38 C3L-04889 LSCC miRNA-Seq tumor CPT0267670009 eaf92313-9abf-46b5-bfda-6f1ca9a90a03_mirnaseq_gdc_realn.bam 248714832 BAM NA 2324052c-da43-4128-b89f-c5baa3b405f5 8be2a59dff8dd6590f70c01936fe71e8 hg38 Primary Tumor C3L-04889.RNA-Seq.R1.A C3L-04889 LSCC RNA-Seq tissue_normal CPT0267700009 200505_UNC31-K00269_0277_AHGFKNBBXY_TAAGGTCA-TGTCGTAG_S15_L004_R1_001.fastq.gz 4003967585 FASTQ NA 118ec532-9720-42b4-8294-d45af9626739 701cc2f7d5c5c4cf6ab5947e00827553 NA Solid Tissue Normal C3L-04889.RNA-Seq.R1.T C3L-04889 LSCC RNA-Seq tumor CPT0267670009 200428_UNC32-K00270_0243_AHG3Y3BBXY_CGGAACTG-CACTACGA_S29_L008_R1_001.fastq.gz 3797742630 FASTQ NA c87b369f-d2b6-46f4-bcca-290a7a5b8b08 6e13a5627d3879d56f35feb90380f796 NA Primary Tumor C3L-04889.RNA-Seq.R2.A C3L-04889 LSCC RNA-Seq tissue_normal CPT0267700009 200505_UNC31-K00269_0277_AHGFKNBBXY_TAAGGTCA-TGTCGTAG_S15_L004_R2_001.fastq.gz 4410790939 FASTQ NA 729a5650-c170-412b-ab2f-8e93883b4eae c09143b47acef6eac82076b1600add9f NA Solid Tissue Normal C3L-04889.RNA-Seq.R2.T C3L-04889 LSCC RNA-Seq tumor CPT0267670009 200428_UNC32-K00270_0243_AHG3Y3BBXY_CGGAACTG-CACTACGA_S29_L008_R2_001.fastq.gz 4104660907 FASTQ NA 324c04ab-2b75-4417-90c8-01debcd8df70 08f0a866d88b54eebdd7ae0a6e63addb NA Primary Tumor C3L-04889.WGS.N C3L-04889 LSCC WGS blood_normal CPT0267790002 CPT0267790002.WholeGenome.RP-2158.bam 25689343028 BAM NA 85fc8b87-8297-4e43-bdaf-3f5ed87c23a2 3f8d1a643b3465d730172a5f8ecdcb88 hg19 Blood Derived Normal +C3L-04889.WGS.N.hg38 C3L-04889 LSCC WGS blood_normal CPT0267790002 a53c2467-4e6f-4d84-a6b8-5c26eca640ca_wgs_gdc_realn.bam 75817414984 BAM NA d5a6e3b7-70c9-49fa-a2a1-66a924932a1f b596742dc702a8679356c15ac5191616 hg38 Blood Derived Normal C3L-04889.WGS.T C3L-04889 LSCC WGS tumor CPT0267670006 CPT0267670006.WholeGenome.RP-2158.bam 24753593308 BAM NA 1911ae31-f68a-46e3-a610-e6e77e8fbcb1 3e086a549d9bfe576546fd7be9f8f1a7 hg19 Primary Tumor +C3L-04889.WGS.T.hg38 C3L-04889 LSCC WGS tumor CPT0267670006 4bfb9da1-f676-4dbd-b71a-ef9a54bf2bb8_wgs_gdc_realn.bam 72875650257 BAM NA 247ecd00-dc1d-4d7f-815b-d53768c379b0 c98210e64d2465d4eb6255c734ed91c1 hg38 Primary Tumor C3L-04889.WXS.A C3L-04889 LSCC WXS tissue_normal CPT0267700006 CPT0267700006.WholeExome.RP-1303.bam 19215035059 BAM NA 819bfe54-ef80-4c19-9a3e-40a26ecc9775 00a132a3f85b2011abe3a0ae07d93695 hg19 Solid Tissue Normal C3L-04889.WXS.N C3L-04889 LSCC WXS blood_normal CPT0267790002 CPT0267790002.WholeExome.RP-1303.bam 26975737133 BAM NA 741d9ce6-034d-4c14-9599-5fb9e3e7c2d7 b5bb29ea590fcae52554e17947833c1c hg19 Blood Derived Normal C3L-04889.WXS.T C3L-04889 LSCC WXS tumor CPT0267670006 CPT0267670006.WholeExome.RP-1303.bam 23154056179 BAM NA 486d04ac-def6-45e7-8b1b-5846c8534b96 ff4421b4610465f435b49d811c486a46 hg19 Primary Tumor @@ -14079,6 +14333,7 @@ C3L-04912.MethArray.Green.T C3L-04912 LSCC Methylation Array tumor CPT0254350006 C3L-04912.MethArray.Red.A C3L-04912 LSCC Methylation Array tissue_normal CPT0254400006 204372030085_R08C01_Red.idat 13677880 IDAT Red 2b9b1ac4-1c7a-4e3a-90e2-a17486e31d15 5d8b248b29838015d2b0d64751155de1 NA Solid Tissue Normal C3L-04912.MethArray.Red.T C3L-04912 LSCC Methylation Array tumor CPT0254350006 204372030079_R05C01_Red.idat 13677880 IDAT Red 044345af-eef2-41cc-afd4-565d282f6ef5 279966cee856504c2f37394a639ee9fa NA Primary Tumor C3L-04912.miRNA-Seq.A C3L-04912 LSCC miRNA-Seq tissue_normal CPT0254400009 200513_UNC31-K00269_0278_BHH7Y7BBXY_TGACCA_S23_L007_R1_001.unaln.bam 261205736 BAM NA 53b7acc9-abdc-43b5-913b-4bbec104f0b7 8fdcbe05ec7dd42d53770b0d99fc8263 NA Solid Tissue Normal +C3L-04912.miRNA-Seq.A.hg38 C3L-04912 LSCC miRNA-Seq tissue_normal CPT0254400009 f5e30b7b-70e4-47a3-b654-51bd00144977_mirnaseq_gdc_realn.bam 294712586 BAM NA 5943f382-b99b-4c21-ba28-3ea24bf519f8 1a38d9872fec5cb04cd29c75d6c0e2c5 hg38 Solid Tissue Normal C3L-04912.miRNA-Seq.T C3L-04912 LSCC miRNA-Seq tumor CPT0254350009 200224_UNC31-K00269_0267_AHC722BBXY_CAGGCG_S33_L007_R1_001.unaln.bam 153277532 BAM NA 7ecb8141-2188-4a64-8ea5-e7ed6a20e1eb 2516c17faf8c4a463faff5b05bda6deb NA Primary Tumor C3L-04912.miRNA-Seq.T C3L-04912 LSCC miRNA-Seq tumor CPT0254350009 200526_UNC32-K00270_0248_BHH7WFBBXY_CAGGCG_S4_L001_R1_001.unaln.bam 168440443 BAM NA 343f92d5-4124-4231-8700-92a3990424c7 823610fd9e03ab58452ad383975290d7 NA Primary Tumor C3L-04912.RNA-Seq.R1.A C3L-04912 LSCC RNA-Seq tissue_normal CPT0254400009 200505_UNC31-K00269_0277_AHGFKNBBXY_GGTGAACC-GCGTTGGA_S4_L001_R1_001.fastq.gz 3587377683 FASTQ NA 036496c6-d921-4da0-a332-7c70a5475890 b5302feb5071433391d81d6630c38591 NA Solid Tissue Normal @@ -14086,7 +14341,9 @@ C3L-04912.RNA-Seq.R1.T C3L-04912 LSCC RNA-Seq tumor CPT0254350009 200428_UNC32-K C3L-04912.RNA-Seq.R2.A C3L-04912 LSCC RNA-Seq tissue_normal CPT0254400009 200505_UNC31-K00269_0277_AHGFKNBBXY_GGTGAACC-GCGTTGGA_S4_L001_R2_001.fastq.gz 4113520732 FASTQ NA 1a3fc70a-ecd1-45d6-a44d-cc124aafdbb3 f61f775c9972d616f108cf234e3f156b NA Solid Tissue Normal C3L-04912.RNA-Seq.R2.T C3L-04912 LSCC RNA-Seq tumor CPT0254350009 200428_UNC32-K00270_0243_AHG3Y3BBXY_TACCGAGG-CCTGAACT_S1_L001_R2_001.fastq.gz 3923198924 FASTQ NA 8b0cb2b2-bd84-4f90-a21c-42eb722d5545 da22980ee6135a1b2bdd625d9dd4bc44 NA Primary Tumor C3L-04912.WGS.N C3L-04912 LSCC WGS blood_normal CPT0254490002 CPT0254490002.WholeGenome.RP-2158.bam 32121951882 BAM NA e80b8a5b-a8f3-47b0-ac58-23f3fc09c711 f85d8899c3d0b8b543119392deba95dc hg19 Blood Derived Normal +C3L-04912.WGS.N.hg38 C3L-04912 LSCC WGS blood_normal CPT0254490002 00c8e708-0b26-4993-a88c-77f89ee28cff_wgs_gdc_realn.bam 93877810004 BAM NA 7bcb216f-65c8-426f-8151-d03834b16ccb 62eb0710442958cb73445c8fa54b2e4e hg38 Blood Derived Normal C3L-04912.WGS.T C3L-04912 LSCC WGS tumor CPT0254350006 CPT0254350006.WholeGenome.RP-2158.bam 24090676120 BAM NA 35091386-0e2d-4abf-bebd-33426f47adf6 6b2aadb1ce1fe2f112a9ff4097009566 hg19 Primary Tumor +C3L-04912.WGS.T.hg38 C3L-04912 LSCC WGS tumor CPT0254350006 1acb5add-1160-4bcb-8121-aad43a85ae38_wgs_gdc_realn.bam 72176061076 BAM NA 9e2f0f6f-9196-435a-ace9-917e80e5f254 b0f73ad975bd32ba103fe1aa4ab4da90 hg38 Primary Tumor C3L-04912.WXS.A C3L-04912 LSCC WXS tissue_normal CPT0254400006 CPT0254400006.WholeExome.RP-1303.bam 22048583718 BAM NA 277193b6-c8cf-416d-8f50-50e52bea3fcd f7b993336122dd36baaea6f28db1d762 hg19 Solid Tissue Normal C3L-04912.WXS.N C3L-04912 LSCC WXS blood_normal CPT0254490002 CPT0254490002.WholeExome.RP-1303.bam 24533875733 BAM NA 2da1efb2-8d01-42b8-8585-d0a39b43f9d1 0c42980bb14128e2a17c15be5c61f97b hg19 Blood Derived Normal C3L-04912.WXS.T C3L-04912 LSCC WXS tumor CPT0254350006 CPT0254350006.WholeExome.RP-1303.bam 22538882838 BAM NA 1be982f5-b457-4df5-89d2-5d0a6c3f61eb 3fede06fdbb62ab72ea97c7b0efd0177 hg19 Primary Tumor @@ -14095,13 +14352,17 @@ C3L-04916.MethArray.Green.T C3L-04916 LSCC Methylation Array tumor CPT0253820006 C3L-04916.MethArray.Red.A C3L-04916 LSCC Methylation Array tissue_normal CPT0253860006 204367470131_R08C01_Red.idat 13677880 IDAT Red 01fecba0-9698-48f1-ad88-9639a5821308 70c382ad4c296f76a6d0806876a9e760 NA Solid Tissue Normal C3L-04916.MethArray.Red.T C3L-04916 LSCC Methylation Array tumor CPT0253820006 204367490056_R05C01_Red.idat 13677895 IDAT Red db816541-f766-43aa-9bf1-dcc38b0670af 15aa15844c0e466fac41f088c6b8c322 NA Primary Tumor C3L-04916.miRNA-Seq.A C3L-04916 LSCC miRNA-Seq tissue_normal CPT0253860009 200513_UNC31-K00269_0278_BHH7Y7BBXY_ATCACG_S5_L007_R1_001.unaln.bam 218899294 BAM NA c0acae60-0cb4-4efd-9288-a20a6da094b8 3b2501e4479d35ce846ae0f9e63a6ab8 NA Solid Tissue Normal +C3L-04916.miRNA-Seq.A.hg38 C3L-04916 LSCC miRNA-Seq tissue_normal CPT0253860009 bc73a744-bfc8-402c-b4f9-4f841397cec8_mirnaseq_gdc_realn.bam 244716330 BAM NA 0fc8227a-b774-499b-9d6f-8d9126748a9b 2ea3eca7a5153d4b92f02d4935b60302 hg38 Solid Tissue Normal C3L-04916.miRNA-Seq.T C3L-04916 LSCC miRNA-Seq tumor CPT0253820009 200224_UNC31-K00269_0267_AHC722BBXY_CACCGG_S30_L007_R1_001.unaln.bam 193871673 BAM NA 0904ad3f-cc9e-4a93-bfa6-79eaea1873bf c0545c72642711a28b0dd00a813aae87 NA Primary Tumor +C3L-04916.miRNA-Seq.T.hg38 C3L-04916 LSCC miRNA-Seq tumor CPT0253820009 e39a35af-0a4c-4b34-9c98-161cdab47f17_mirnaseq_gdc_realn.bam 214894132 BAM NA afc8adc7-e87e-46a1-8ec0-58ab9f3e72d2 83df8b4ea683e15642f5dd896151843a hg38 Primary Tumor C3L-04916.RNA-Seq.R1.A C3L-04916 LSCC RNA-Seq tissue_normal CPT0253860009 200505_UNC31-K00269_0277_AHGFKNBBXY_ATATCTCG-ATCTTAGT_S2_L001_R1_001.fastq.gz 4247172933 FASTQ NA b67de956-fe78-45f8-8813-35042c29c81b 1623dc8cad427495ded52e7229f2c9d8 NA Solid Tissue Normal C3L-04916.RNA-Seq.R1.T C3L-04916 LSCC RNA-Seq tumor CPT0253820009 200428_UNC31-K00269_0276_BHH5TMBBXY_TTACAGGA-TGACAAGC_S14_L004_R1_001.fastq.gz 3753245339 FASTQ NA db28b53c-8f86-46dd-b62b-989f8909d92e 16952691e0dcd8c975a2c9a7ff1fe3ff NA Primary Tumor C3L-04916.RNA-Seq.R2.A C3L-04916 LSCC RNA-Seq tissue_normal CPT0253860009 200505_UNC31-K00269_0277_AHGFKNBBXY_ATATCTCG-ATCTTAGT_S2_L001_R2_001.fastq.gz 4773647924 FASTQ NA 9370ba3d-5ec0-49b8-abc8-2efa8fa4644f aed9037ead72a286a74a1e2b78831212 NA Solid Tissue Normal C3L-04916.RNA-Seq.R2.T C3L-04916 LSCC RNA-Seq tumor CPT0253820009 200428_UNC31-K00269_0276_BHH5TMBBXY_TTACAGGA-TGACAAGC_S14_L004_R2_001.fastq.gz 4043813321 FASTQ NA f7f37873-fe64-4257-8d45-c77aa913b746 5ffa67307f39209ba7885bea7bd723dc NA Primary Tumor C3L-04916.WGS.N C3L-04916 LSCC WGS blood_normal CPT0253950002 CPT0253950002.WholeGenome.RP-2158.bam 27211685550 BAM NA 64f33867-6b66-4106-b028-84200d62ffe3 d40c95c7b24f1e5aa0d4b1d077264f66 hg19 Blood Derived Normal +C3L-04916.WGS.N.hg38 C3L-04916 LSCC WGS blood_normal CPT0253950002 19045df1-920b-4394-9a2c-7efac1afdbce_wgs_gdc_realn.bam 83404250762 BAM NA 0c3c18a9-693d-4d7c-811e-43a69ccb9861 6219f8552a4819e0e11e6623780b8b6e hg38 Blood Derived Normal C3L-04916.WGS.T C3L-04916 LSCC WGS tumor CPT0253820006 CPT0253820006.WholeGenome.RP-2158.bam 23192852802 BAM NA a31bba1d-0dd8-4405-a947-63f8798dad8e 16b04c6b2a69d0b9e1df2d89638ddbf5 hg19 Primary Tumor +C3L-04916.WGS.T.hg38 C3L-04916 LSCC WGS tumor CPT0253820006 fd157e5a-efff-4dbc-9fcb-41a6355a4016_wgs_gdc_realn.bam 69638483654 BAM NA d7cd46cd-09c5-4e20-9e40-bc70e8caaf92 a2dcba242fd272fbf54e4ef9c718bddc hg38 Primary Tumor C3L-04916.WXS.A C3L-04916 LSCC WXS tissue_normal CPT0253860006 CPT0253860006.WholeExome.RP-1303.bam 23372757396 BAM NA 69362b88-851a-412a-8687-5263ed8b44d8 2e6415c00a19c347a83184ed930f059b hg19 Solid Tissue Normal C3L-04916.WXS.N C3L-04916 LSCC WXS blood_normal CPT0253950002 CPT0253950002.WholeExome.RP-1303.bam 28394706546 BAM NA a74f2836-c0f0-4731-af06-0aea9298e166 4138e4a9494f341ed263a2e172a16601 hg19 Blood Derived Normal C3L-04916.WXS.T C3L-04916 LSCC WXS tumor CPT0253820006 CPT0253820006.WholeExome.RP-1303.bam 23094598277 BAM NA 1fcbdeb9-8e3b-4179-a100-fdf28e89906c 9f3e697681b66a2522c2559b8922b06c hg19 Primary Tumor @@ -14110,27 +14371,36 @@ C3L-04921.MethArray.Green.T C3L-04921 LSCC Methylation Array tumor CPT0252750006 C3L-04921.MethArray.Red.A C3L-04921 LSCC Methylation Array tissue_normal CPT0252770009 204367470131_R07C01_Red.idat 13677880 IDAT Red 02160c12-5bbd-45a7-b774-360d980df290 0e1b37758cd380602091335f4754588d NA Solid Tissue Normal C3L-04921.MethArray.Red.T C3L-04921 LSCC Methylation Array tumor CPT0252750006 204372030011_R04C01_Red.idat 13677890 IDAT Red 05413ff9-be16-4ca3-bfa8-5507e3590c39 d0391761d62cb8f07d7142aafb76d300 NA Primary Tumor C3L-04921.miRNA-Seq.A C3L-04921 LSCC miRNA-Seq tissue_normal CPT0252770006 200513_UNC31-K00269_0278_BHH7Y7BBXY_CTCAGA_S40_L006_R1_001.unaln.bam 179834472 BAM NA 4b248c48-d029-473e-bf14-a93efe4a7eb7 881171039011fe6046c558c23839c1db NA Solid Tissue Normal +C3L-04921.miRNA-Seq.A.hg38 C3L-04921 LSCC miRNA-Seq tissue_normal CPT0252770006 55c05fa7-1b33-4ce6-afbe-dfde2fe7d6f5_mirnaseq_gdc_realn.bam 202404036 BAM NA 16058bfc-17bd-417b-a01a-594c1daad293 97a549f2c9f708db677e4c9e7beb324c hg38 Solid Tissue Normal C3L-04921.miRNA-Seq.T C3L-04921 LSCC miRNA-Seq tumor CPT0252750013 200325_UNC31-K00269_0272_AHHC2NBBXY_CTCAGA_S16_L001_R1_001.unaln.bam 168810704 BAM NA 2e31a7c2-f5ce-465b-adb5-61bb7cfce6ff e11e1095220d27564356c1fc5437d249 NA Primary Tumor +C3L-04921.miRNA-Seq.T.hg38 C3L-04921 LSCC miRNA-Seq tumor CPT0252750013 d736bee0-7cf3-4d03-a840-3e8f35074d67_mirnaseq_gdc_realn.bam 183859694 BAM NA 678b5cc6-0d79-49f4-8f52-e15b81f9aedf 8df9e3f2bcf12707d65fc9867e26014b hg38 Primary Tumor C3L-04921.RNA-Seq.R1.A C3L-04921 LSCC RNA-Seq tissue_normal CPT0252770006 200505_UNC32-K00270_0246_BHH5F5BBXY_CGGACAAC-TCCGGATT_S21_L006_R1_001.fastq.gz 4162750082 FASTQ NA a90e194a-4b94-4312-a3f4-69ac0c520e90 199b6300fb45c0a4edc93e6a6c9ba109 NA Solid Tissue Normal C3L-04921.RNA-Seq.R1.T C3L-04921 LSCC RNA-Seq tumor CPT0252750013 200428_UNC31-K00269_0275_AHGCJVBBXY_TCTGTTGG-TCGAATGG_S24_L006_R1_001.fastq.gz 3672634106 FASTQ NA 4ed05607-7dec-4e7e-86c3-01b85e9c96e4 c487a79b13192a7ac62347d46feaa249 NA Primary Tumor C3L-04921.RNA-Seq.R2.A C3L-04921 LSCC RNA-Seq tissue_normal CPT0252770006 200505_UNC32-K00270_0246_BHH5F5BBXY_CGGACAAC-TCCGGATT_S21_L006_R2_001.fastq.gz 5149041292 FASTQ NA 242152e6-2216-45db-a8a3-df068b26d22f 27ce5bebfba9323318cd1651680c35d4 NA Solid Tissue Normal C3L-04921.RNA-Seq.R2.T C3L-04921 LSCC RNA-Seq tumor CPT0252750013 200428_UNC31-K00269_0275_AHGCJVBBXY_TCTGTTGG-TCGAATGG_S24_L006_R2_001.fastq.gz 3857705611 FASTQ NA 079c546b-c03b-4638-8cea-0d3fb3b6326c ba02468840987eaf2c07ce223970289f NA Primary Tumor C3L-04921.WGS.N C3L-04921 LSCC WGS blood_normal CPT0252880002 CPT0252880002.WholeGenome.RP-2158.bam 21698223377 BAM NA 5e234217-beb3-4049-a5de-019d6994afa0 6b5c9c2ac5023985670ce7c2acc34f05 hg19 Blood Derived Normal +C3L-04921.WGS.N.hg38 C3L-04921 LSCC WGS blood_normal CPT0252880002 bc1c32a3-372a-45bf-a6bd-1374ff7922fb_wgs_gdc_realn.bam 64859253722 BAM NA e666531d-597f-4ea1-8ebb-96f4d3cc4ade e91b39cfbdbb357d059b8cd51b14c15a hg38 Blood Derived Normal C3L-04921.WGS.T C3L-04921 LSCC WGS tumor CPT0252750006 CPT0252750006.WholeGenome.RP-2158.bam 29474446084 BAM NA 2a0ab715-a72e-4dae-8806-807f0b13f613 9a69942825ad93b93bd1547d5fe664c2 hg19 Primary Tumor +C3L-04921.WGS.T.hg38 C3L-04921 LSCC WGS tumor CPT0252750006 2437fa18-5a93-4db0-b3ae-08396dc784d9_wgs_gdc_realn.bam 87060632436 BAM NA 4344ed3f-54ff-422a-8362-6ecbc704951b 435030b366c0e2919c0b65bfec96076f hg38 Primary Tumor C3L-04921.WXS.A C3L-04921 LSCC WXS tissue_normal CPT0252770009 CPT0252770009.WholeExome.RP-1303.bam 25680271224 BAM NA 98c21908-2f64-4fbc-8d5a-1a9b7b2dc29d 43d65b341e14362176a63c07a4d74e86 hg19 Solid Tissue Normal C3L-04921.WXS.N C3L-04921 LSCC WXS blood_normal CPT0252880002 CPT0252880002.WholeExome.RP-1303.bam 26037100352 BAM NA ac2cfa3b-7d1f-4123-bd04-2aac87168bbd 4e3fb07f10cb68904707aa94acd0f172 hg19 Blood Derived Normal +C3L-04921.WXS.T C3L-04921 LSCC WXS tumor CPT0252750006 CPT0252750006.WholeExome.RP-1303.bam 34993491158 BAM NA 6876b181-7c0d-42c9-a45d-2680b9dc61fd 05cca6868cff270745b781fc47b1c876 hg19 Primary Tumor C3L-04922.MethArray.Green.A C3L-04922 LSCC Methylation Array tissue_normal CPT0254030006 204367490082_R08C01_Grn.idat 13677900 IDAT Green e38dd1f8-4439-4387-ab71-28eda4c8eaeb b0404b22a8539a0ca198f279a3ea9a98 NA Solid Tissue Normal C3L-04922.MethArray.Green.T C3L-04922 LSCC Methylation Array tumor CPT0254010006 204367490093_R06C01_Grn.idat 13677900 IDAT Green 3134e037-739a-43ec-a261-4260c8031321 9dae13d58916a96766b5159868559098 NA Primary Tumor C3L-04922.MethArray.Red.A C3L-04922 LSCC Methylation Array tissue_normal CPT0254030006 204367490082_R08C01_Red.idat 13677900 IDAT Red 1418ae93-39ad-48c5-b42d-06f5568c6b27 a0763b7beb352032cd5c9c7242448f0c NA Solid Tissue Normal C3L-04922.MethArray.Red.T C3L-04922 LSCC Methylation Array tumor CPT0254010006 204367490093_R06C01_Red.idat 13677900 IDAT Red 0234b349-6d84-4c8b-8879-e853bed8c32a 81ddc5d7cc0e1bf13ba27d1c0ea287e3 NA Primary Tumor C3L-04922.miRNA-Seq.A C3L-04922 LSCC miRNA-Seq tissue_normal CPT0254030009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CGATGT_S9_L007_R1_001.unaln.bam 264992137 BAM NA cecc7fb7-152e-4f3d-a48d-93c2532beafa e997b479d644c6e41681d27121e8d297 NA Solid Tissue Normal +C3L-04922.miRNA-Seq.A.hg38 C3L-04922 LSCC miRNA-Seq tissue_normal CPT0254030009 eaa5d6c2-d828-470a-887e-0082f7752891_mirnaseq_gdc_realn.bam 295487736 BAM NA 6c6be620-75b8-4c03-b2d0-4d5bf90cd4ad 6ee569b15a9837187f9ed1b4386a7016 hg38 Solid Tissue Normal C3L-04922.miRNA-Seq.T C3L-04922 LSCC miRNA-Seq tumor CPT0254010009 200224_UNC31-K00269_0267_AHC722BBXY_CACGAT_S31_L007_R1_001.unaln.bam 257275759 BAM NA 41a2e164-6e29-4370-a814-a85950523016 f34c293cd35f95814b6511a6d5ce0d06 NA Primary Tumor +C3L-04922.miRNA-Seq.T.hg38 C3L-04922 LSCC miRNA-Seq tumor CPT0254010009 6bc88405-3f2d-4a2f-b407-b320cdf48cec_mirnaseq_gdc_realn.bam 286934142 BAM NA 6e51edd3-7e9b-4358-97f9-619b662c0fa0 19e96e5a5870cee2248b3b402134000a hg38 Primary Tumor C3L-04922.RNA-Seq.R1.A C3L-04922 LSCC RNA-Seq tissue_normal CPT0254030009 200505_UNC31-K00269_0277_AHGFKNBBXY_GCGCTCTA-GCTCCGAC_S3_L001_R1_001.fastq.gz 3975133314 FASTQ NA 88c980d2-f9dd-4f81-bb9f-6907d229b055 af91ba8a17cf26af322578586d367cb1 NA Solid Tissue Normal C3L-04922.RNA-Seq.R1.T C3L-04922 LSCC RNA-Seq tumor CPT0254010009 200428_UNC31-K00269_0276_BHH5TMBBXY_GGCATTCT-CTAGCTTG_S15_L004_R1_001.fastq.gz 3578547939 FASTQ NA 47f8b8c4-4dc0-41d8-a0bc-b943d8ecaaed 83477b0ca4d550518e61872e53096262 NA Primary Tumor C3L-04922.RNA-Seq.R2.A C3L-04922 LSCC RNA-Seq tissue_normal CPT0254030009 200505_UNC31-K00269_0277_AHGFKNBBXY_GCGCTCTA-GCTCCGAC_S3_L001_R2_001.fastq.gz 4482970352 FASTQ NA 80027f20-5747-4f1a-84c7-efe9ef7d3bfd c6ab63e37e2b48b74cbe3321e3c95eba NA Solid Tissue Normal C3L-04922.RNA-Seq.R2.T C3L-04922 LSCC RNA-Seq tumor CPT0254010009 200428_UNC31-K00269_0276_BHH5TMBBXY_GGCATTCT-CTAGCTTG_S15_L004_R2_001.fastq.gz 3904371477 FASTQ NA 0ab6b521-f980-4560-8c83-39e7d958f5ba d224f663d144f836be733959637b0393 NA Primary Tumor C3L-04922.WGS.N C3L-04922 LSCC WGS blood_normal CPT0254130002 CPT0254130002.WholeGenome.RP-2158.bam 27961183031 BAM NA 414cfcca-07d1-4f9f-b9b4-a2d182329812 5c958d6a855f85463e7dd29a3c419582 hg19 Blood Derived Normal +C3L-04922.WGS.N.hg38 C3L-04922 LSCC WGS blood_normal CPT0254130002 23ce6b7b-bb94-4a97-95e9-d63cd0bea5e5_wgs_gdc_realn.bam 84359189370 BAM NA 23d7cd43-f08c-4a94-97d2-0ffea5a7cbb5 881a0ea44ee61a0dbb869c52f76560f5 hg38 Blood Derived Normal C3L-04922.WGS.T C3L-04922 LSCC WGS tumor CPT0254010006 CPT0254010006.WholeGenome.RP-2158.bam 27440633992 BAM NA fb552bf8-b4b5-44e6-a542-8b106c32a66f 5bdf959641b5c574f7c8574d3254370f hg19 Primary Tumor +C3L-04922.WGS.T.hg38 C3L-04922 LSCC WGS tumor CPT0254010006 d0cab13b-f2df-4901-97cd-7a8556661410_wgs_gdc_realn.bam 80665752293 BAM NA d3898ded-3f45-4fd3-bb20-c7a9e84aebf6 a5ac06b8a0581312d6351840aea32994 hg38 Primary Tumor C3L-04922.WXS.A C3L-04922 LSCC WXS tissue_normal CPT0254030006 CPT0254030006.WholeExome.RP-1303.bam 22611964465 BAM NA 54735bc5-dec0-4ef4-af07-24db22fb397f 97cc42a0bc1f2d50bf1c0492a9e3f8b1 hg19 Solid Tissue Normal C3L-04922.WXS.N C3L-04922 LSCC WXS blood_normal CPT0254130002 CPT0254130002.WholeExome.RP-1303.bam 26999676590 BAM NA 502a8081-e150-4590-be4d-226fc5e6b13d 888c11f46898e2812cb87b33584f876e hg19 Blood Derived Normal C3L-04922.WXS.T C3L-04922 LSCC WXS tumor CPT0254010006 CPT0254010006.WholeExome.RP-1303.bam 21149593006 BAM NA 5ee82b78-3b25-43b9-934f-f09b83b82c2b abc4ec87ab0f0e94ee9da2bdef2b2058 hg19 Primary Tumor @@ -14139,13 +14409,17 @@ C3L-05020.MethArray.Green.T C3L-05020 LSCC Methylation Array tumor CPT0262460006 C3L-05020.MethArray.Red.A C3L-05020 LSCC Methylation Array tissue_normal CPT0262510006 204367490084_R04C01_Red.idat 13677890 IDAT Red 1e3bf5c0-86ca-4133-b5ec-f335899c6b76 b76920e92379d6a83ce976102f03d636 NA Solid Tissue Normal C3L-05020.MethArray.Red.T C3L-05020 LSCC Methylation Array tumor CPT0262460006 204372030074_R05C01_Red.idat 13677880 IDAT Red 69fbc2e0-00bf-4bd6-ac7b-fb47cb1af225 be8280b630cec377995015cd121cae44 NA Primary Tumor C3L-05020.miRNA-Seq.A C3L-05020 LSCC miRNA-Seq tissue_normal CPT0262510009 200513_UNC31-K00269_0278_BHH7Y7BBXY_TTAGGC_S24_L005_R1_001.unaln.bam 244487184 BAM NA 6879950b-772f-4394-a216-49c0882c8bdb a35f3040a0585c93ed7d6f70b9b8615a NA Solid Tissue Normal +C3L-05020.miRNA-Seq.A.hg38 C3L-05020 LSCC miRNA-Seq tissue_normal CPT0262510009 02449727-14fd-4a39-8708-c8022e46721e_mirnaseq_gdc_realn.bam 274033428 BAM NA e89744a0-b737-43fc-8e8b-7df52dbca536 4440dbe049845a173d25ac2ecdb4bb9e hg38 Solid Tissue Normal C3L-05020.miRNA-Seq.T C3L-05020 LSCC miRNA-Seq tumor CPT0262460009 200224_UNC31-K00269_0267_AHC722BBXY_ATGTCA_S15_L008_R1_001.unaln.bam 245912467 BAM NA b208fcf2-0c9d-4e9f-a140-c00c3b7d41f3 0ca1c6d89998bd4ae64b1bb8a6bc62f5 NA Primary Tumor +C3L-05020.miRNA-Seq.T.hg38 C3L-05020 LSCC miRNA-Seq tumor CPT0262460009 a55ce9af-0f05-4d9e-b825-bf6e6168e05f_mirnaseq_gdc_realn.bam 268517353 BAM NA 3739804e-62af-4ba0-b474-d93def2206f9 17ee24d5e53a71544356021a664dad70 hg38 Primary Tumor C3L-05020.RNA-Seq.R1.A C3L-05020 LSCC RNA-Seq tissue_normal CPT0262510009 200505_UNC32-K00270_0245_AHH5FVBBXY_GGACTTGG-CGCAGACG_S3_L005_R1_001.fastq.gz 3405898536 FASTQ NA f5ab75f7-4feb-46d2-ac3e-52984334b00e 35f8b2d0af872f72a2c41c4c9686d309 NA Solid Tissue Normal C3L-05020.RNA-Seq.R1.T C3L-05020 LSCC RNA-Seq tumor CPT0262460009 200505_UNC32-K00270_0245_AHH5FVBBXY_GGCTTAAG-TCGTGACC_S15_L004_R1_001.fastq.gz 3458601880 FASTQ NA f56cde44-a302-4e05-af29-99b841a4c531 efe0682d3738cdf0e1d10dbff797f030 NA Primary Tumor C3L-05020.RNA-Seq.R2.A C3L-05020 LSCC RNA-Seq tissue_normal CPT0262510009 200505_UNC32-K00270_0245_AHH5FVBBXY_GGACTTGG-CGCAGACG_S3_L005_R2_001.fastq.gz 3610606327 FASTQ NA 9d873937-00f9-4770-8b8e-71354acc37bd b708013e51a9c2e907308ac88ab2d832 NA Solid Tissue Normal C3L-05020.RNA-Seq.R2.T C3L-05020 LSCC RNA-Seq tumor CPT0262460009 200505_UNC32-K00270_0245_AHH5FVBBXY_GGCTTAAG-TCGTGACC_S15_L004_R2_001.fastq.gz 3703763631 FASTQ NA b3c3cc55-f3ce-4488-9edd-0e3451544107 1ba52d5c26c42623e3e670b3e51de1d3 NA Primary Tumor C3L-05020.WGS.N C3L-05020 LSCC WGS blood_normal CPT0263780002 CPT0263780002.WholeGenome.RP-2158.bam 26323199236 BAM NA 664050ec-fee9-42dc-8903-5fe8c6b6a1d8 8dc7a90590477bfa4ff54f863074de96 hg19 Blood Derived Normal +C3L-05020.WGS.N.hg38 C3L-05020 LSCC WGS blood_normal CPT0263780002 9a5e7de2-a3e2-4837-b944-c4f71db5be2f_wgs_gdc_realn.bam 77638470623 BAM NA 82895603-0b17-4f96-b192-987c98e5be51 18656630f9f000e90070deb7a8472cb9 hg38 Blood Derived Normal C3L-05020.WGS.T C3L-05020 LSCC WGS tumor CPT0262460006 CPT0262460006.WholeGenome.RP-2158.bam 25718538719 BAM NA 048fff88-b8b1-43fd-9df5-0c9b13db65fe f470042fc7cd3ee5efcfe1c783b4d61c hg19 Primary Tumor +C3L-05020.WGS.T.hg38 C3L-05020 LSCC WGS tumor CPT0262460006 816c3a90-a426-4ad7-947b-b338d7b7d45d_wgs_gdc_realn.bam 76737362255 BAM NA 701a8e2f-d44a-4890-b736-125d2e8792ee 47b2da64d1a744189ddc88aa77dae8fd hg38 Primary Tumor C3L-05020.WXS.A C3L-05020 LSCC WXS tissue_normal CPT0262510006 CPT0262510006.WholeExome.RP-1303.bam 20180583695 BAM NA bcde3d53-2c50-451d-ab72-0f4063c84a5f cdb2e9f074037af86363e6199ae4f233 hg19 Solid Tissue Normal C3L-05020.WXS.N C3L-05020 LSCC WXS blood_normal CPT0263780002 CPT0263780002.WholeExome.RP-1303.bam 24858044942 BAM NA 788eb82d-4e29-4c8b-9805-47a72af3ecfb a8f6e2c32edfa636b4ca6af014a063fd hg19 Blood Derived Normal C3L-05020.WXS.T C3L-05020 LSCC WXS tumor CPT0262460006 CPT0262460006.WholeExome.RP-1303.bam 26091171819 BAM NA d664228c-afbf-40df-8a30-867a96666d25 ec9f77ced04ff4183529ce96703fd644 hg19 Primary Tumor @@ -14154,12 +14428,15 @@ C3L-05022.MethArray.Green.T C3L-05022 LSCC Methylation Array tumor CPT0274960006 C3L-05022.MethArray.Red.A C3L-05022 LSCC Methylation Array tissue_normal CPT0275010006 204367400087_R07C01_Red.idat 13677880 IDAT Red f6b47ea6-b89d-42ca-a046-d71489d4e555 38465b844862f201e632be53a9ff3c5b NA Solid Tissue Normal C3L-05022.MethArray.Red.T C3L-05022 LSCC Methylation Array tumor CPT0274960006 204372030090_R04C01_Red.idat 13677880 IDAT Red 302db99f-5510-4de1-89cf-5e67dd32fe45 10909fe4748763ca7d8330d8ffc79ca1 NA Primary Tumor C3L-05022.miRNA-Seq.A C3L-05022 LSCC miRNA-Seq tissue_normal CPT0275010009 200513_UNC31-K00269_0278_BHH7Y7BBXY_TGACCA_S23_L005_R1_001.unaln.bam 260915964 BAM NA 49d3ba55-2377-43ba-ab75-d97802cf4d0e fc577de26657bfb3a09f09baa615a4c9 NA Solid Tissue Normal +C3L-05022.miRNA-Seq.A.hg38 C3L-05022 LSCC miRNA-Seq tissue_normal CPT0275010009 c4de58a1-0e14-4ee8-9ba1-390f28b2d53a_mirnaseq_gdc_realn.bam 289901167 BAM NA d97eacc0-62ac-476c-a434-c61eede0644f 5edaaf5c905770c443c30bbcf9d322cb hg38 Solid Tissue Normal C3L-05022.miRNA-Seq.T C3L-05022 LSCC miRNA-Seq tumor CPT0274960009 200224_UNC31-K00269_0267_AHC722BBXY_CCGTCC_S16_L008_R1_001.unaln.bam 281311755 BAM NA f1127c44-595f-4e4a-afc6-428f024acca2 5fc790a1da3217e531014e8f4fc1e153 NA Primary Tumor +C3L-05022.miRNA-Seq.T.hg38 C3L-05022 LSCC miRNA-Seq tumor CPT0274960009 42811ed2-abb9-4d04-a0f4-cacb17339e59_mirnaseq_gdc_realn.bam 310163774 BAM NA b2f46963-d645-458b-8d46-657b0a30a7a7 6c64e6cc608cb60dbf44e7888d6349aa hg38 Primary Tumor C3L-05022.RNA-Seq.R1.A C3L-05022 LSCC RNA-Seq tissue_normal CPT0275010009 200505_UNC32-K00270_0245_AHH5FVBBXY_AAGTCCAA-TATGAGTA_S4_L005_R1_001.fastq.gz 3958739243 FASTQ NA bef01d6f-1e3d-4082-8717-e9efcf6430f7 c5c360a9adbd5202b6001eab443588d1 NA Solid Tissue Normal C3L-05022.RNA-Seq.R1.T C3L-05022 LSCC RNA-Seq tumor CPT0274960009 200505_UNC32-K00270_0245_AHH5FVBBXY_AATCCGGA-CTACAGTT_S16_L004_R1_001.fastq.gz 4451704090 FASTQ NA fa0e4fbb-9a10-4dca-9e54-ae9915a506ca e14b17bb00f8114f809ee82570f9a47d NA Primary Tumor C3L-05022.RNA-Seq.R2.A C3L-05022 LSCC RNA-Seq tissue_normal CPT0275010009 200505_UNC32-K00270_0245_AHH5FVBBXY_AAGTCCAA-TATGAGTA_S4_L005_R2_001.fastq.gz 4207828548 FASTQ NA 9a2e01f8-b26f-494f-b0bc-03d622bdf34e 160665a43a1b34320f3f02809ef4f62f NA Solid Tissue Normal C3L-05022.RNA-Seq.R2.T C3L-05022 LSCC RNA-Seq tumor CPT0274960009 200505_UNC32-K00270_0245_AHH5FVBBXY_AATCCGGA-CTACAGTT_S16_L004_R2_001.fastq.gz 4874032343 FASTQ NA e3d4a9ce-c37c-4578-9eca-9d6719f10efa 862b2812a1ec86b1eb25073f32c14f17 NA Primary Tumor C3L-05022.WGS.N C3L-05022 LSCC WGS blood_normal CPT0273480002 CPT0273480002.WholeGenome.RP-2158.bam 24664061553 BAM NA c6195cca-32d9-4180-af27-6ed4deeb828d b105d1bd51dbfb280b3e28f318d943b9 hg19 Blood Derived Normal +C3L-05022.WGS.N.hg38 C3L-05022 LSCC WGS blood_normal CPT0273480002 bfb047a9-b14c-4ede-9c1b-79978ee288f4_wgs_gdc_realn.bam 73737561516 BAM NA e06ef31f-a018-4db4-9f1b-b160bd3d0533 c4d45defcf1c2f292578dc7830484361 hg38 Blood Derived Normal C3L-05022.WGS.T C3L-05022 LSCC WGS tumor CPT0274960006 CPT0274960006.WholeGenome.RP-2158.bam 30134145444 BAM NA d7dfe5fa-ec4f-4075-aaed-9e3a7d3d85e8 0c3688c2ed197eb04e4a4e2a32a40798 hg19 Primary Tumor C3L-05022.WGS.T C3L-05022 LSCC WGS tumor CPT0274960006 CPT0274960006.WholeGenome.RP-2158.bam 30181890872 BAM NA 201af3c2-e107-4d5c-bcb2-a2ea3b202100 374f04ef59cab6c983b1cc844c1482be hg19 Primary Tumor C3L-05022.WXS.A C3L-05022 LSCC WXS tissue_normal CPT0275010006 CPT0275010006.WholeExome.RP-1303.bam 23075889681 BAM NA fdb6e82e-7991-470f-aa6b-ce8068a2939f 82bec9d2eec3c6b8f3353e5c2ba4d1ba hg19 Solid Tissue Normal @@ -14170,13 +14447,17 @@ C3L-05145.MethArray.Green.T C3L-05145 LSCC Methylation Array tumor CPT0296990006 C3L-05145.MethArray.Red.A C3L-05145 LSCC Methylation Array tissue_normal CPT0297120006 204372030014_R05C01_Red.idat 13677895 IDAT Red ea4dcb69-047c-4206-9f4b-32b4303cf94a cd08d7ee3ff4ad3889517f6f4e2fa578 NA Solid Tissue Normal C3L-05145.MethArray.Red.T C3L-05145 LSCC Methylation Array tumor CPT0296990006 204372030071_R03C01_Red.idat 13677890 IDAT Red ef02b7eb-14f4-4dd9-a2a9-b07384212319 2664661857a03e42b38cd19f41828ceb NA Primary Tumor C3L-05145.miRNA-Seq.A C3L-05145 LSCC miRNA-Seq tissue_normal CPT0297120009 200513_UNC31-K00269_0278_BHH7Y7BBXY_GTGAAA_S19_L005_R1_001.unaln.bam 245362138 BAM NA 3618840a-deb4-4e95-a67b-a8f829877638 b64021ab92279a45d590fac7797542d6 NA Solid Tissue Normal +C3L-05145.miRNA-Seq.A.hg38 C3L-05145 LSCC miRNA-Seq tissue_normal CPT0297120009 8da5d881-ab4a-4651-8d95-fe40477cba9c_mirnaseq_gdc_realn.bam 272620643 BAM NA 922b515e-4ed5-4e7d-b674-f181a0b295d4 a5438eeb30aa084883eb5860a77abf6a hg38 Solid Tissue Normal C3L-05145.miRNA-Seq.T C3L-05145 LSCC miRNA-Seq tumor CPT0296990009 200224_UNC31-K00269_0267_AHC722BBXY_TCATTC_S45_L007_R1_001.unaln.bam 181281986 BAM NA ea46e1dc-656e-49ac-b425-45cb9eb93bf8 395f06eeb0f28228a157455c4095394d NA Primary Tumor +C3L-05145.miRNA-Seq.T.hg38 C3L-05145 LSCC miRNA-Seq tumor CPT0296990009 906921c0-7be5-4643-80ea-064fa2eaae2f_mirnaseq_gdc_realn.bam 199968133 BAM NA 5071d4e0-4897-48eb-9f35-5e58c39f7f7b 326a44d726e5eae2e6aef7ad90b1ebd5 hg38 Primary Tumor C3L-05145.RNA-Seq.R1.A C3L-05145 LSCC RNA-Seq tissue_normal CPT0297120009 200505_UNC32-K00270_0246_BHH5F5BBXY_ATGTAAGT-ACTCTATG_S1_L001_R1_001.fastq.gz 4135338522 FASTQ NA 8bb9aec1-8ad1-4c7a-bb5c-b06d1d2e7d60 9d46ffa784c8d576d275734148a5f79f NA Solid Tissue Normal C3L-05145.RNA-Seq.R1.T C3L-05145 LSCC RNA-Seq tumor CPT0296990009 200428_UNC32-K00270_0243_AHG3Y3BBXY_ATGGCATG-AAGGTACC_S13_L004_R1_001.fastq.gz 3402545997 FASTQ NA 8cc89418-7fb5-4ced-8cb0-57380227d1da 7f47a1db480b85d0aff263bf68439eb8 NA Primary Tumor C3L-05145.RNA-Seq.R2.A C3L-05145 LSCC RNA-Seq tissue_normal CPT0297120009 200505_UNC32-K00270_0246_BHH5F5BBXY_ATGTAAGT-ACTCTATG_S1_L001_R2_001.fastq.gz 4993363659 FASTQ NA 5d6ef432-bab5-4b99-98e8-c0f2290f12f7 08741edc11e248901b16d7d844089831 NA Solid Tissue Normal C3L-05145.RNA-Seq.R2.T C3L-05145 LSCC RNA-Seq tumor CPT0296990009 200428_UNC32-K00270_0243_AHG3Y3BBXY_ATGGCATG-AAGGTACC_S13_L004_R2_001.fastq.gz 3646675574 FASTQ NA 5f94f5a5-fa3a-4976-972b-044ec97b853d d7329ff090c4eb86355c81e279184da1 NA Primary Tumor C3L-05145.WGS.N C3L-05145 LSCC WGS blood_normal CPT0297190002 CPT0297190002.WholeGenome.RP-2158.bam 31177574695 BAM NA 29a8d6c4-7bbd-4a4c-9cc9-5647c8d00a1d e4d12ae63dea50468bae7cffd5973723 hg19 Blood Derived Normal +C3L-05145.WGS.N.hg38 C3L-05145 LSCC WGS blood_normal CPT0297190002 876141d5-19d4-4daf-9415-07d0edb645da_wgs_gdc_realn.bam 94886173994 BAM NA 13daaafc-c444-40ce-b023-af39bd2306a2 a2f023098c723f7522243e9673407b0e hg38 Blood Derived Normal C3L-05145.WGS.T C3L-05145 LSCC WGS tumor CPT0296990006 CPT0296990006.WholeGenome.RP-2158.bam 27984798543 BAM NA 3490fa29-008f-44ff-b76b-fac182542f77 e63a3cf84a79dcceb0a7e817e81a1c74 hg19 Primary Tumor +C3L-05145.WGS.T.hg38 C3L-05145 LSCC WGS tumor CPT0296990006 01ccd04c-f42e-4b22-a3a3-c54dcbad40cc_wgs_gdc_realn.bam 84529226057 BAM NA 6eb74828-fb73-4de6-968c-833bc1f06b38 d5c5c498eab7b252b8e804b726f09228 hg38 Primary Tumor C3L-05145.WXS.A C3L-05145 LSCC WXS tissue_normal CPT0297120006 CPT0297120006.WholeExome.RP-1303.bam 27669291063 BAM NA 47360df6-1e53-4fc0-a7fc-73f0387f6bdb 300275af71ba45f73795b67d343cb1f9 hg19 Solid Tissue Normal C3L-05145.WXS.N C3L-05145 LSCC WXS blood_normal CPT0297190002 CPT0297190002.WholeExome.RP-1303.bam 25464554719 BAM NA 52ad52f8-5848-427f-a7d8-ac908754266e da8e95c94102ea11a122b9cea6526dd6 hg19 Blood Derived Normal C3L-05145.WXS.T C3L-05145 LSCC WXS tumor CPT0296990006 CPT0296990006.WholeExome.RP-1303.bam 25498273813 BAM NA ce6fc164-8385-46cd-a759-febf945b50b6 f48bd8f1b324adc42b5044d0d6d8c85c hg19 Primary Tumor @@ -14185,27 +14466,36 @@ C3L-05148.MethArray.Green.T C3L-05148 LSCC Methylation Array tumor CPT0278900009 C3L-05148.MethArray.Red.A C3L-05148 LSCC Methylation Array tissue_normal CPT0278920006 204372030022_R04C01_Red.idat 13677905 IDAT Red 709076fa-8891-438d-909e-1074036bbc09 bf547af77fa414687bfd96a406a393ff NA Solid Tissue Normal C3L-05148.MethArray.Red.T C3L-05148 LSCC Methylation Array tumor CPT0278900009 204372030076_R05C01_Red.idat 13677890 IDAT Red 441b6d64-c177-43bd-8b6a-80694fa1d42b 86a5c455290e097b6f32a00dc4f349d3 NA Primary Tumor C3L-05148.miRNA-Seq.A C3L-05148 LSCC miRNA-Seq tissue_normal CPT0278920009 200513_UNC31-K00269_0278_BHH7Y7BBXY_AGTTCC_S4_L005_R1_001.unaln.bam 222703925 BAM NA dddb86c8-2eb9-4517-9b75-b067e889c225 6d0bfedc29dbb8c90723bf14b75b96bc NA Solid Tissue Normal +C3L-05148.miRNA-Seq.A.hg38 C3L-05148 LSCC miRNA-Seq tissue_normal CPT0278920009 2c676eb7-4ae1-4a16-aab9-0e3387a6e0a6_mirnaseq_gdc_realn.bam 249871930 BAM NA 665403f3-3602-4a7b-8246-7364a4ef7f6f ffc25b62166929dabaea4b21a029df2d hg38 Solid Tissue Normal C3L-05148.miRNA-Seq.T C3L-05148 LSCC miRNA-Seq tumor CPT0278900006 200224_UNC31-K00269_0267_AHC722BBXY_TGACCA_S4_L006_R1_001.unaln.bam 248400241 BAM NA 66b146b6-d8f9-4add-b0d3-361a820a18b9 89738cbaa26e83b71e986aa9d35eba8e NA Primary Tumor +C3L-05148.miRNA-Seq.T.hg38 C3L-05148 LSCC miRNA-Seq tumor CPT0278900006 3e8a0b36-3a6f-4441-9c15-8dfb0977a8f6_mirnaseq_gdc_realn.bam 271787631 BAM NA 33b06b47-aa51-4fad-af81-c00e7d9dd3c7 da649d712a7d065fb64639944526342e hg38 Primary Tumor C3L-05148.RNA-Seq.R1.A C3L-05148 LSCC RNA-Seq tissue_normal CPT0278920009 200505_UNC32-K00270_0245_AHH5FVBBXY_TTGGACTC-GGAAGCAG_S14_L008_R1_001.fastq.gz 4305299688 FASTQ NA bb2fb91b-0a34-4ec2-ab6e-68a21aa1e3a6 036f2f2041f03d70b77e0f96de04ca72 NA Solid Tissue Normal C3L-05148.RNA-Seq.R1.T C3L-05148 LSCC RNA-Seq tumor CPT0278900006 200428_UNC32-K00270_0243_AHG3Y3BBXY_GGTGAACC-GCGTTGGA_S20_L005_R1_001.fastq.gz 3041948461 FASTQ NA af114fd2-b8b1-48fd-bbae-965cd6ecc918 9f3fc4bc8d7d998d729ffd64b1bcc99c NA Primary Tumor C3L-05148.RNA-Seq.R2.A C3L-05148 LSCC RNA-Seq tissue_normal CPT0278920009 200505_UNC32-K00270_0245_AHH5FVBBXY_TTGGACTC-GGAAGCAG_S14_L008_R2_001.fastq.gz 4797159486 FASTQ NA 53a00811-67fa-4991-9b18-fa784319d987 691a5bd1d8dee588d5f3b5f2b3ee7608 NA Solid Tissue Normal C3L-05148.RNA-Seq.R2.T C3L-05148 LSCC RNA-Seq tumor CPT0278900006 200428_UNC32-K00270_0243_AHG3Y3BBXY_GGTGAACC-GCGTTGGA_S20_L005_R2_001.fastq.gz 3201920741 FASTQ NA c95f3058-14e1-4708-a812-b8114e516f1c 534e6d8becceee41a1beb97d3579d7a0 NA Primary Tumor C3L-05148.WGS.N C3L-05148 LSCC WGS blood_normal CPT0278990002 CPT0278990002.WholeGenome.RP-2158.bam 29836582535 BAM NA e189b041-d5a6-4dd2-88c5-e6b4c22fc251 8f19565754ebc3a294551126f90c8a8c hg19 Blood Derived Normal +C3L-05148.WGS.N.hg38 C3L-05148 LSCC WGS blood_normal CPT0278990002 ab27f25f-6b76-4a14-be5a-4897d759a848_wgs_gdc_realn.bam 90006842825 BAM NA 99d55ea8-dde2-427d-9e42-1f122702d349 7758a2ce2fb6102798feaca5e613396b hg38 Blood Derived Normal C3L-05148.WGS.T C3L-05148 LSCC WGS tumor CPT0278900009 CPT0278900009.WholeGenome.RP-2158.bam 23216766508 BAM NA 41f7ee5c-da0b-4cae-a78e-c80e0a5255cb 98c2e3253f37ea32ec048db880eb01d3 hg19 Primary Tumor +C3L-05148.WGS.T.hg38 C3L-05148 LSCC WGS tumor CPT0278900009 fd7fff26-2c02-43f1-b56f-81fccd132dbc_wgs_gdc_realn.bam 68509068022 BAM NA 8addce24-cadb-40bf-9a5a-7171feaf5dd3 dc5f07991a1043fafa3e92cede8f9df1 hg38 Primary Tumor C3L-05148.WXS.A C3L-05148 LSCC WXS tissue_normal CPT0278920006 CPT0278920006.WholeExome.RP-1303.bam 26528568031 BAM NA c70423f7-0300-49f1-aadd-89a917e6544c a6f6a1704eede37712ceac94af0e5bd1 hg19 Solid Tissue Normal C3L-05148.WXS.N C3L-05148 LSCC WXS blood_normal CPT0278990002 CPT0278990002.WholeExome.RP-1303.bam 24646543150 BAM NA 9cdf4723-b6c6-48b8-a822-c19ca833ba69 00fab83d5f0755b97c3bc9bc4d8b1136 hg19 Blood Derived Normal +C3L-05148.WXS.T C3L-05148 LSCC WXS tumor CPT0278900009 CPT0278900009.WholeExome.RP-1303.bam 37401707555 BAM NA e3b2877d-f332-4128-bc11-8dc546f1bb9e bb161899b0fb2b129e92d4006cb5fbad hg19 Primary Tumor C3L-05150.MethArray.Green.A C3L-05150 LSCC Methylation Array tissue_normal CPT0277940006 204372030070_R08C01_Grn.idat 13677900 IDAT Green b7e93fc2-a8c2-408b-8939-c80fc27b8bda 6139221ca91c9e5ade539bb3a251f2aa NA Solid Tissue Normal C3L-05150.MethArray.Green.T C3L-05150 LSCC Methylation Array tumor CPT0277920009 204367400087_R06C01_Grn.idat 13677880 IDAT Green e49ac7c9-576e-402f-8d22-a57d5b0474d9 e4aa0b4936a7cc7e1e82a73b3dfb1311 NA Primary Tumor C3L-05150.MethArray.Red.A C3L-05150 LSCC Methylation Array tissue_normal CPT0277940006 204372030070_R08C01_Red.idat 13677900 IDAT Red ee2ea3c2-7b09-402b-b9ec-e38dc7f05a22 0cbe9d0af4a9a2dbff0c6858e9103923 NA Solid Tissue Normal C3L-05150.MethArray.Red.T C3L-05150 LSCC Methylation Array tumor CPT0277920009 204367400087_R06C01_Red.idat 13677880 IDAT Red 19169300-fb51-430e-89ea-c78ddc768240 8b7a5331cbed5e3dd6d205620625c731 NA Primary Tumor C3L-05150.miRNA-Seq.A C3L-05150 LSCC miRNA-Seq tissue_normal CPT0277940009 200513_UNC31-K00269_0278_BHH7Y7BBXY_AGTCAA_S3_L005_R1_001.unaln.bam 232618859 BAM NA 8324c9d5-b03d-440c-9686-f54489ad24cb dababe677eafab1b3877a37d4d761199 NA Solid Tissue Normal +C3L-05150.miRNA-Seq.A.hg38 C3L-05150 LSCC miRNA-Seq tissue_normal CPT0277940009 8e930c81-fb0e-4c18-8a70-329884b362b4_mirnaseq_gdc_realn.bam 255902931 BAM NA 0c225fde-e318-4f9b-9e24-004a5f6cbe10 6fbee99c5aa0ac1fbca809cb92522711 hg38 Solid Tissue Normal C3L-05150.miRNA-Seq.T C3L-05150 LSCC miRNA-Seq tumor CPT0277920006 200224_UNC31-K00269_0267_AHC722BBXY_TTAGGC_S3_L006_R1_001.unaln.bam 203756659 BAM NA 896c25fc-775f-4a71-8aaf-7f43bde7d8c2 12d62086a1e43eeb1f7d598de89063bc NA Primary Tumor +C3L-05150.miRNA-Seq.T.hg38 C3L-05150 LSCC miRNA-Seq tumor CPT0277920006 eb3ec794-3743-45fc-9767-9534255ce4b0_mirnaseq_gdc_realn.bam 223779809 BAM NA b11d1962-fe69-4d80-bdff-62f4428944b5 cc0b35018d7d645e3a54ce86aaed08cf hg38 Primary Tumor C3L-05150.RNA-Seq.R1.A C3L-05150 LSCC RNA-Seq tissue_normal CPT0277940009 200505_UNC32-K00270_0245_AHH5FVBBXY_CCAAGTCT-AAGGATGA_S13_L008_R1_001.fastq.gz 4023851157 FASTQ NA af0a2ae8-1213-4f55-b0aa-3400671c912b 3b1264abb5e7fda32978349307ed0c50 NA Solid Tissue Normal C3L-05150.RNA-Seq.R1.T C3L-05150 LSCC RNA-Seq tumor CPT0277920006 200428_UNC32-K00270_0243_AHG3Y3BBXY_AACAGGTT-ATACCAAG_S19_L005_R1_001.fastq.gz 4037503113 FASTQ NA 8fcf53e9-43d9-43c0-8df2-9f87b28ada7e a0602f0e4f67335c01329131a8d62daa NA Primary Tumor C3L-05150.RNA-Seq.R2.A C3L-05150 LSCC RNA-Seq tissue_normal CPT0277940009 200505_UNC32-K00270_0245_AHH5FVBBXY_CCAAGTCT-AAGGATGA_S13_L008_R2_001.fastq.gz 4510871326 FASTQ NA a45c7b13-759f-40cd-8f23-20187e682376 478f6ce516d0277437ec401d334c2615 NA Solid Tissue Normal C3L-05150.RNA-Seq.R2.T C3L-05150 LSCC RNA-Seq tumor CPT0277920006 200428_UNC32-K00270_0243_AHG3Y3BBXY_AACAGGTT-ATACCAAG_S19_L005_R2_001.fastq.gz 4226601737 FASTQ NA 1183ebe9-4e91-440d-8fad-fbe57a12f3fa fa9302b4989621fc341df49d928d5cfa NA Primary Tumor C3L-05150.WGS.N C3L-05150 LSCC WGS blood_normal CPT0278010002 CPT0278010002.WholeGenome.RP-2158.bam 25019707852 BAM NA 5b5988f0-d7b2-42db-9056-424626d5a763 01b3e2b6bd805492754b9ecf7bc7fcb9 hg19 Blood Derived Normal +C3L-05150.WGS.N.hg38 C3L-05150 LSCC WGS blood_normal CPT0278010002 70f3bcdb-e8fd-4054-b659-dfa5e4def710_wgs_gdc_realn.bam 73719380386 BAM NA 0cc84dab-4866-4121-aac6-08c250d8727a 6afa7bc5233c503b48d6ef07a2069d26 hg38 Blood Derived Normal C3L-05150.WGS.T C3L-05150 LSCC WGS tumor CPT0277920009 CPT0277920009.WholeGenome.RP-2158.bam 30018505319 BAM NA aacd0bc4-b71d-41f0-b6de-d81ea37b1607 2189aa6682c9f31525f3469638ba02bf hg19 Primary Tumor +C3L-05150.WGS.T.hg38 C3L-05150 LSCC WGS tumor CPT0277920009 1645ce61-f1b1-4d70-b60f-ef20b644bf3e_wgs_gdc_realn.bam 90232145319 BAM NA 62869dd2-c112-46cb-9fea-79204061f30a 9ec800f9d57f3ba870a04fcb39ac5106 hg38 Primary Tumor C3L-05150.WXS.A C3L-05150 LSCC WXS tissue_normal CPT0277940006 CPT0277940006.WholeExome.RP-1303.bam 19323806295 BAM NA 67523238-ffb3-40f7-8535-3e37aa2a6dbc 77a1a43e7fffb4117feba03786730586 hg19 Solid Tissue Normal C3L-05150.WXS.N C3L-05150 LSCC WXS blood_normal CPT0278010002 CPT0278010002.WholeExome.RP-1303.bam 28230546190 BAM NA 651b29de-2ff3-4749-a5a6-7e01b95dfbd4 9224e86db6d62b05c9f7ea2bb7e9de01 hg19 Blood Derived Normal C3L-05150.WXS.T C3L-05150 LSCC WXS tumor CPT0277920009 CPT0277920009.WholeExome.RP-1303.bam 22431760642 BAM NA 64fdf012-973d-45a2-8a96-08aa0c57506e adb790000ffa84ff426fbb017b9bb80d hg19 Primary Tumor @@ -14214,21 +14504,28 @@ C3L-05172.MethArray.Green.T C3L-05172 LSCC Methylation Array tumor CPT0297320006 C3L-05172.MethArray.Red.A C3L-05172 LSCC Methylation Array tissue_normal CPT0297360006 204367400148_R07C01_Red.idat 13677880 IDAT Red d8e8a044-c649-4701-87c4-d174821ed388 f2f9e39a2a220f2835de4f816c4a5992 NA Solid Tissue Normal C3L-05172.MethArray.Red.T C3L-05172 LSCC Methylation Array tumor CPT0297320006 204372030127_R06C01_Red.idat 13677880 IDAT Red 266bfa37-0b8e-4ed5-bceb-49c359fbf521 90c0d05091c04fb7908bce0383740b3d NA Primary Tumor C3L-05172.miRNA-Seq.A C3L-05172 LSCC miRNA-Seq tissue_normal CPT0297360009 200513_UNC31-K00269_0278_BHH7Y7BBXY_GTGGCC_S20_L005_R1_001.unaln.bam 251785864 BAM NA 74fdef89-0196-4630-8ad8-b4624297d6b3 dd80b9e747dedfda5cbfaf6cd55fb28a NA Solid Tissue Normal +C3L-05172.miRNA-Seq.A.hg38 C3L-05172 LSCC miRNA-Seq tissue_normal CPT0297360009 7bc4be93-4d22-4b64-92bd-8be3b5935b6f_mirnaseq_gdc_realn.bam 279423564 BAM NA d7ed63d6-f26e-42f3-bffd-8b1f07568b04 8477df22bfb56376479303e3588d14b0 hg38 Solid Tissue Normal C3L-05172.miRNA-Seq.T C3L-05172 LSCC miRNA-Seq tumor CPT0297320009 200224_UNC31-K00269_0267_AHC722BBXY_TCCCGA_S46_L007_R1_001.unaln.bam 197772926 BAM NA 13452f59-74ee-4b97-b355-c105758e6097 ed12a4ecb383745eb3c74d07c9743aeb NA Primary Tumor +C3L-05172.miRNA-Seq.T.hg38 C3L-05172 LSCC miRNA-Seq tumor CPT0297320009 f3222863-0f84-4926-8dfd-6233c0ba92ae_mirnaseq_gdc_realn.bam 224629784 BAM NA ae429d8c-9bcf-46f1-91e2-e358d80aa09d 26aac9bf5bc220c151173f4a70f57469 hg38 Primary Tumor C3L-05172.RNA-Seq.R1.A C3L-05172 LSCC RNA-Seq tissue_normal CPT0297360009 200505_UNC32-K00270_0246_BHH5F5BBXY_GCACGGAC-GTCTCGCA_S3_L001_R1_001.fastq.gz 3707732955 FASTQ NA 819fbd4a-e5f1-4d53-bbf7-8b9d3cb9565d b96dfbe5d1e90628072d6ed11df3ee6f NA Solid Tissue Normal C3L-05172.RNA-Seq.R1.T C3L-05172 LSCC RNA-Seq tumor CPT0297320009 200428_UNC32-K00270_0243_AHG3Y3BBXY_GCAATGCA-GGAACGTT_S14_L004_R1_001.fastq.gz 2621957559 FASTQ NA f31993fe-df52-42b8-9be6-ce9297eb6d51 2f12d44b289d4fd5d57c9a0f3580074a NA Primary Tumor C3L-05172.RNA-Seq.R2.A C3L-05172 LSCC RNA-Seq tissue_normal CPT0297360009 200505_UNC32-K00270_0246_BHH5F5BBXY_GCACGGAC-GTCTCGCA_S3_L001_R2_001.fastq.gz 4578052186 FASTQ NA 209a6677-1a54-45fd-8105-9533e9e36511 07075722d1aa7b0eaa22269d645150d1 NA Solid Tissue Normal C3L-05172.RNA-Seq.R2.T C3L-05172 LSCC RNA-Seq tumor CPT0297320009 200428_UNC32-K00270_0243_AHG3Y3BBXY_GCAATGCA-GGAACGTT_S14_L004_R2_001.fastq.gz 2760954111 FASTQ NA bcc70605-36f2-47a9-8f4e-c6a2c97f62ce 85c577006ca647d7486975fa9cc42515 NA Primary Tumor C3L-05172.WGS.N C3L-05172 LSCC WGS blood_normal CPT0297430002 CPT0297430002.WholeGenome.RP-2158.bam 23178518008 BAM NA dc99c33b-4166-4ffd-b1b1-6a3b8163483f 64c8e01c251833dc68f6e1a3469d932b hg19 Blood Derived Normal +C3L-05172.WGS.N.hg38 C3L-05172 LSCC WGS blood_normal CPT0297430002 b9fc8052-a489-40d8-a755-bfb51c9fb52e_wgs_gdc_realn.bam 68180485289 BAM NA 68752f3f-4795-4299-ab31-8ad5af5ae616 985efc0822537676d4e1ceefef569f0d hg38 Blood Derived Normal C3L-05172.WGS.T C3L-05172 LSCC WGS tumor CPT0297320006 CPT0297320006.WholeGenome.RP-2158.bam 29724775421 BAM NA b6cf2f2c-1fd1-4b12-a3b3-7c4914af63af 98dd7af734347d0f5d4b4631271ad048 hg19 Primary Tumor +C3L-05172.WGS.T.hg38 C3L-05172 LSCC WGS tumor CPT0297320006 0a416131-f6b7-460a-9591-ef8ffe154266_wgs_gdc_realn.bam 86958238016 BAM NA c15bd281-e096-402a-9482-44882e3eef7f 6e32113973ab1de5a74368371d55ba18 hg38 Primary Tumor C3L-05172.WXS.A C3L-05172 LSCC WXS tissue_normal CPT0297360006 CPT0297360006.WholeExome.RP-1303.bam 19195981861 BAM NA 34cce4cc-ef1d-4b89-83d8-880bb93f03a4 beb8877c4f38b0dcfd3a60f8aae7b9fb hg19 Solid Tissue Normal C3L-05172.WXS.N C3L-05172 LSCC WXS blood_normal CPT0297430002 CPT0297430002.WholeExome.RP-1303.bam 31473073088 BAM NA 5f9e1ac9-1089-43db-9f85-e2518f4498b3 846b3f77d20be84aee699fab64d1a826 hg19 Blood Derived Normal +C3L-05172.WXS.T C3L-05172 LSCC WXS tumor CPT0297320006 CPT0297320006.WholeExome.RP-1303.bam 49995416534 BAM NA 6a696c6b-46a8-4a0c-a201-c7241e60b918 fdee3c7e879c53cd3d2cd4af927cfff3 hg19 Primary Tumor C3L-05176.MethArray.Green.A C3L-05176 LSCC Methylation Array tissue_normal CPT0297850006 204367400148_R08C01_Grn.idat 13677880 IDAT Green e2abc6d1-7ba9-4657-9504-8f30362a9047 c5b88ee972bb4ed8ba6a2eb2cf5c2106 NA Solid Tissue Normal C3L-05176.MethArray.Green.T C3L-05176 LSCC Methylation Array tumor CPT0297810006 204372030127_R05C01_Grn.idat 13677880 IDAT Green ee3fdee9-200d-4b02-ab3d-85cffedd6050 08268624565fb1ef14a19066e8fecbcb NA Primary Tumor C3L-05176.MethArray.Red.A C3L-05176 LSCC Methylation Array tissue_normal CPT0297850006 204367400148_R08C01_Red.idat 13677880 IDAT Red 8fc6a5e3-56fb-496a-9fc0-95ea59747a10 eeb963c24e00461e430c30bcad0ef7d0 NA Solid Tissue Normal C3L-05176.MethArray.Red.T C3L-05176 LSCC Methylation Array tumor CPT0297810006 204372030127_R05C01_Red.idat 13677880 IDAT Red ae1fcac6-81f4-4ab9-90d7-f94086117301 d9cf6ae9645e55cbf67f0cc604dc1fa0 NA Primary Tumor C3L-05176.miRNA-Seq.A C3L-05176 LSCC miRNA-Seq tissue_normal CPT0297850009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CGTACG_S10_L005_R1_001.unaln.bam 191035152 BAM NA 06731481-e6ab-4f02-8ee6-0c747c496b85 d434f8d53ce6834a0201a1952d6d5622 NA Solid Tissue Normal +C3L-05176.miRNA-Seq.A.hg38 C3L-05176 LSCC miRNA-Seq tissue_normal CPT0297850009 b4df2c81-2d78-49fa-a0b9-f1cff2d099bf_mirnaseq_gdc_realn.bam 212830645 BAM NA 2b972157-0a16-426b-bcc6-893817fa19aa ceeee5910fa99b3798b8d92e1b7037d5 hg38 Solid Tissue Normal C3L-05176.miRNA-Seq.T C3L-05176 LSCC miRNA-Seq tumor CPT0297810009 200224_UNC31-K00269_0267_AHC722BBXY_TCGGCA_S48_L007_R1_001.unaln.bam 228755461 BAM NA f8fc81c6-ab12-44b2-a832-4b676f24ea5f d2db65bd5cb0855bfdce17d008c0a330 NA Primary Tumor +C3L-05176.miRNA-Seq.T.hg38 C3L-05176 LSCC miRNA-Seq tumor CPT0297810009 0823bfb1-ba0f-4e59-a49c-ee19dadb5bcd_mirnaseq_gdc_realn.bam 257510902 BAM NA 24027047-7354-4190-b35b-336d4012dfdc 3019e74c7d4ec4465fce1c1492eabdc2 hg38 Primary Tumor C3L-05176.RNA-Seq.R1.A C3L-05176 LSCC RNA-Seq tissue_normal CPT0297850009 200505_UNC32-K00270_0246_BHH5F5BBXY_AACGTTCC-GGAGTACT_S5_L002_R1_001.fastq.gz 3558919849 FASTQ NA 6514b654-ce55-43d0-aef0-a041ee796908 1946ecdc176c0a7306f5bfdf9f6db864 NA Solid Tissue Normal C3L-05176.RNA-Seq.R1.T C3L-05176 LSCC RNA-Seq tumor CPT0297810009 200428_UNC32-K00270_0243_AHG3Y3BBXY_ACCTTGGC-GGCCTCAT_S16_L004_R1_001.fastq.gz 5137036658 FASTQ NA 9a0bd005-e1bb-48d1-a21c-f820577a17c0 2dcf2740cabf3b98e935b8b119f2c934 NA Primary Tumor C3L-05176.RNA-Seq.R2.A C3L-05176 LSCC RNA-Seq tissue_normal CPT0297850009 200505_UNC32-K00270_0246_BHH5F5BBXY_AACGTTCC-GGAGTACT_S5_L002_R2_001.fastq.gz 4310578591 FASTQ NA ab6848cd-7f4a-4034-8aae-1a79e80cc707 ed930ae0f8c374084213dae2ae754e50 NA Solid Tissue Normal @@ -14236,20 +14533,26 @@ C3L-05176.RNA-Seq.R2.T C3L-05176 LSCC RNA-Seq tumor CPT0297810009 200428_UNC32-K C3L-05176.WGS.N C3L-05176 LSCC WGS blood_normal CPT0297920002 CPT0297920002.WholeGenome.RP-2158.bam 29225582987 BAM NA 156826c1-8077-43a5-a20f-d922277786cc 633ebc16cc7d7e68a7672ca996926c06 hg19 Blood Derived Normal C3L-05176.WGS.N C3L-05176 LSCC WGS blood_normal CPT0297920002 CPT0297920002.WholeGenome.RP-2158.bam 29269475686 BAM NA 9537f307-3a43-4e73-b368-57469bba720d a2178da93f50120aedb702373cd10df8 hg19 Blood Derived Normal C3L-05176.WGS.T C3L-05176 LSCC WGS tumor CPT0297810006 CPT0297810006.WholeGenome.RP-2158.bam 25526132758 BAM NA e7142303-d0a3-4928-a756-ab00e9bd88b8 e9fab4a4f9dc7beff441e96717efe82d hg19 Primary Tumor +C3L-05176.WGS.T.hg38 C3L-05176 LSCC WGS tumor CPT0297810006 7132ca08-c95c-4cd9-83b7-3cf6bfbfa2cf_wgs_gdc_realn.bam 74038074122 BAM NA c0c48786-513b-4ad2-838d-21269fa48404 9fee5ed6fc29eceb3a2c92cf9a8e41c6 hg38 Primary Tumor C3L-05176.WXS.A C3L-05176 LSCC WXS tissue_normal CPT0297850006 CPT0297850006.WholeExome.RP-1303.bam 20000359769 BAM NA 537135fc-bb55-42ac-afb7-fead2451ac75 11f96929fd02051a3abfd1dc93c513c5 hg19 Solid Tissue Normal C3L-05176.WXS.N C3L-05176 LSCC WXS blood_normal CPT0297920002 CPT0297920002.WholeExome.RP-1303.bam 29055113175 BAM NA a868fc10-fef3-4508-9467-5095fcd12c17 34d77950d79b788b421de08b87044c0a hg19 Blood Derived Normal +C3L-05176.WXS.T C3L-05176 LSCC WXS tumor CPT0297810006 CPT0297810006.WholeExome.RP-1303.bam 34419652620 BAM NA 20c2298a-f94b-4327-9976-4a391e0f87e2 40963ea8b4ae3631e75fb914e8d23955 hg19 Primary Tumor C3L-05212.MethArray.Green.A C3L-05212 LSCC Methylation Array tissue_normal CPT0296760006 204367490048_R07C01_Grn.idat 13677885 IDAT Green 18c87ff3-9152-4260-97ba-7245a1f45593 fbcd6e4f54d887a14627effd61e19414 NA Solid Tissue Normal C3L-05212.MethArray.Green.T C3L-05212 LSCC Methylation Array tumor CPT0296710006 204367400148_R06C01_Grn.idat 13677880 IDAT Green 9bba17cc-0dce-4e18-a35a-68972aa975f6 69b7812f5f1cb742ea465116c5ffe250 NA Primary Tumor C3L-05212.MethArray.Red.A C3L-05212 LSCC Methylation Array tissue_normal CPT0296760006 204367490048_R07C01_Red.idat 13677885 IDAT Red ae7edef1-c1d7-4032-bb46-6c2f9b9a46d5 8cf1c6d0f48b7850b8a6f2b1f47e93ad NA Solid Tissue Normal C3L-05212.MethArray.Red.T C3L-05212 LSCC Methylation Array tumor CPT0296710006 204367400148_R06C01_Red.idat 13677880 IDAT Red b2d373c6-96cd-421e-b4c5-c65779ce9af7 18ee75a7fd0ab053cc2c21902208f601 NA Primary Tumor C3L-05212.miRNA-Seq.A C3L-05212 LSCC miRNA-Seq tissue_normal CPT0296760009 200513_UNC31-K00269_0278_BHH7Y7BBXY_GTCCGC_S18_L005_R1_001.unaln.bam 235665526 BAM NA f0c1c5fb-b8a4-4238-8621-dddb8697160f 8de8de1d9b28962b6725fcfdb0181848 NA Solid Tissue Normal +C3L-05212.miRNA-Seq.A.hg38 C3L-05212 LSCC miRNA-Seq tissue_normal CPT0296760009 dde2fde7-62b3-4480-a126-04b9f20b4462_mirnaseq_gdc_realn.bam 263072653 BAM NA 5df75c12-420b-4cd5-9428-ea3e98c7c552 1696d895b628ced73cd8195146892ddb hg38 Solid Tissue Normal C3L-05212.miRNA-Seq.T C3L-05212 LSCC miRNA-Seq tumor CPT0296710009 200224_UNC31-K00269_0267_AHC722BBXY_TATAAT_S44_L007_R1_001.unaln.bam 291326509 BAM NA c31a76c1-3ed6-4572-93c9-a0a987c03424 5b560e3ae988847626bdeda6ec194c7d NA Primary Tumor +C3L-05212.miRNA-Seq.T.hg38 C3L-05212 LSCC miRNA-Seq tumor CPT0296710009 6b4d3edf-2a93-4970-a3de-f80cad4feb82_mirnaseq_gdc_realn.bam 317091984 BAM NA 00ffb5ed-4fba-4d1b-bca4-f802eec34c29 5d4fe1574a0389ab85e481a02b41a0f0 hg38 Primary Tumor C3L-05212.RNA-Seq.R1.A C3L-05212 LSCC RNA-Seq tissue_normal CPT0296760009 200505_UNC32-K00270_0246_BHH5F5BBXY_CGGCGTGA-GCGCCTGT_S2_L001_R1_001.fastq.gz 4085267116 FASTQ NA e649107d-a626-49b3-94b4-c455ab9f0139 6f34d7023b44e1cc75b2b5a1f9de5329 NA Solid Tissue Normal C3L-05212.RNA-Seq.R1.T C3L-05212 LSCC RNA-Seq tumor CPT0296710009 200518_UNC32-K00270_0247_AHH573BBXY_GGAGCGTC-GTCCGTGC_S27_L003_R1_001.fastq.gz 5371243966 FASTQ NA 749d881c-92f4-4ba1-8a5d-3b95fa4a5938 6dff6b2c18ff8a15bd5339ca3054d1da NA Primary Tumor C3L-05212.RNA-Seq.R2.A C3L-05212 LSCC RNA-Seq tissue_normal CPT0296760009 200505_UNC32-K00270_0246_BHH5F5BBXY_CGGCGTGA-GCGCCTGT_S2_L001_R2_001.fastq.gz 5169036395 FASTQ NA fa735290-d0e0-456f-b2aa-e48b0b39a19d 51974718c1b14b499d8c774a84c066f6 NA Solid Tissue Normal C3L-05212.RNA-Seq.R2.T C3L-05212 LSCC RNA-Seq tumor CPT0296710009 200518_UNC32-K00270_0247_AHH573BBXY_GGAGCGTC-GTCCGTGC_S27_L003_R2_001.fastq.gz 6365162923 FASTQ NA 65ebc622-bb9d-4a16-a8e3-4bc1ddbfde3d fc0014ce369cfacd334c6ad4659877ab NA Primary Tumor C3L-05212.WGS.N C3L-05212 LSCC WGS blood_normal CPT0296830002 CPT0296830002.WholeGenome.RP-2158.bam 22568046114 BAM NA bd31848e-ef07-4d14-a60b-b63e4039e1bc 2ad9c885dfaff36bdbe6b524eca7e275 hg19 Blood Derived Normal +C3L-05212.WGS.N.hg38 C3L-05212 LSCC WGS blood_normal CPT0296830002 bf747777-536e-4fc9-bac9-e55b29857ab1_wgs_gdc_realn.bam 67352781148 BAM NA 730b7bba-f95b-41c5-9280-824de58d9c4d 981939eb35815e60c0a87f06e4eeb65f hg38 Blood Derived Normal C3L-05212.WGS.T C3L-05212 LSCC WGS tumor CPT0296710006 CPT0296710006.WholeGenome.RP-2158.bam 20184063318 BAM NA 40904e59-e895-41d1-9207-4374cb0b9c3d ba5a5a2b4b2992aabd62123cdb1fe9c1 hg19 Primary Tumor +C3L-05212.WGS.T.hg38 C3L-05212 LSCC WGS tumor CPT0296710006 437c43df-b54f-4e38-adbb-0d6f941261a0_wgs_gdc_realn.bam 59590387959 BAM NA cab17baa-cddb-4a5b-8112-f12d52e71b88 36bff901b5872030f76a4183792ace1d hg38 Primary Tumor C3L-05212.WXS.A C3L-05212 LSCC WXS tissue_normal CPT0296760006 CPT0296760006.WholeExome.RP-1303.bam 24078532732 BAM NA ccca121a-8694-4234-86d9-93a718bb17f1 fc07109987d2868aa848bb4ce565510e hg19 Solid Tissue Normal C3L-05212.WXS.N C3L-05212 LSCC WXS blood_normal CPT0296830002 CPT0296830002.WholeExome.RP-1303.bam 22491075979 BAM NA 7a1e8cec-2e2e-4e67-97d6-0556ba0f1df2 449d059123b48f21c3abde3eb1a31822 hg19 Blood Derived Normal C3L-05212.WXS.T C3L-05212 LSCC WXS tumor CPT0296710006 CPT0296710006.WholeExome.RP-1303.bam 23604910148 BAM NA e0a57216-ddf9-4370-9278-5f5d920a2b5a 81cf3653ea0a35ec23dd5cfcfb5c5407 hg19 Primary Tumor @@ -14258,13 +14561,17 @@ C3L-05221.MethArray.Green.T C3L-05221 LSCC Methylation Array tumor CPT0298140006 C3L-05221.MethArray.Red.A C3L-05221 LSCC Methylation Array tissue_normal CPT0298170006 204367490030_R07C01_Red.idat 13677885 IDAT Red b0f07918-48eb-47e2-bb24-5e5bd1f0c1c0 3686679ca095ed533597fbd1d4cc1e1c NA Solid Tissue Normal C3L-05221.MethArray.Red.T C3L-05221 LSCC Methylation Array tumor CPT0298140006 204372030070_R06C01_Red.idat 13677904 IDAT Red 19739f8c-2983-4b17-9171-1e42e4df67a4 c5f3c9911bb9a7aaff13402b293ad87f NA Primary Tumor C3L-05221.miRNA-Seq.A C3L-05221 LSCC miRNA-Seq tissue_normal CPT0298170009 200513_UNC31-K00269_0278_BHH7Y7BBXY_GAGTGG_S12_L005_R1_001.unaln.bam 257197536 BAM NA ec5d15d5-a3f0-43c7-932c-9d95e92eb471 291f38405f8c505aeaa4ac68e50e1482 NA Solid Tissue Normal +C3L-05221.miRNA-Seq.A.hg38 C3L-05221 LSCC miRNA-Seq tissue_normal CPT0298170009 c196831a-1a99-4dc9-b365-e29021961b62_mirnaseq_gdc_realn.bam 294895764 BAM NA c3049936-7ad8-4a12-befc-c607e0985cff ebbab817fcb96fd190bd77672210710e hg38 Solid Tissue Normal C3L-05221.miRNA-Seq.T C3L-05221 LSCC miRNA-Seq tumor CPT0298140009 200224_UNC31-K00269_0267_AHC722BBXY_ATCACG_S1_L006_R1_001.unaln.bam 206646803 BAM NA dff2e1d3-37c3-4658-8796-3b68c6595d2f 926225a8c8d8d1e34783447b7b67db02 NA Primary Tumor +C3L-05221.miRNA-Seq.T.hg38 C3L-05221 LSCC miRNA-Seq tumor CPT0298140009 c37de72e-2f9b-4fed-8fac-218feffcfb2d_mirnaseq_gdc_realn.bam 224476452 BAM NA 07ee17cb-e3aa-41c1-842a-0c710374c2cd 323b1dea1450eb0b58bdf1d79a3b2309 hg38 Primary Tumor C3L-05221.RNA-Seq.R1.A C3L-05221 LSCC RNA-Seq tissue_normal CPT0298170009 200505_UNC32-K00270_0246_BHH5F5BBXY_GCAGAATT-ACCGGCCA_S7_L002_R1_001.fastq.gz 3650803514 FASTQ NA fe41e3b3-3dfe-471a-909c-0cf299ff0708 9c8b748ef62ccceadadb70b7f4c80b87 NA Solid Tissue Normal C3L-05221.RNA-Seq.R1.T C3L-05221 LSCC RNA-Seq tumor CPT0298140009 200428_UNC32-K00270_0243_AHG3Y3BBXY_ATATCTCG-ATCTTAGT_S17_L005_R1_001.fastq.gz 4646995701 FASTQ NA f8f144f4-7082-4c4e-bbfc-422b4dfebf80 e0ea6adf4d9090de329c7025c7da07d6 NA Primary Tumor C3L-05221.RNA-Seq.R2.A C3L-05221 LSCC RNA-Seq tissue_normal CPT0298170009 200505_UNC32-K00270_0246_BHH5F5BBXY_GCAGAATT-ACCGGCCA_S7_L002_R2_001.fastq.gz 4367339220 FASTQ NA 7650893e-2e98-4ac1-adbb-1e02d942a61d 733a3fab6e7528cc415c3623e1167fb4 NA Solid Tissue Normal C3L-05221.RNA-Seq.R2.T C3L-05221 LSCC RNA-Seq tumor CPT0298140009 200428_UNC32-K00270_0243_AHG3Y3BBXY_ATATCTCG-ATCTTAGT_S17_L005_R2_001.fastq.gz 4922576827 FASTQ NA ef16c400-6f72-4338-943e-25fe26327a3d 83c78f0346e1cd2b010bcfa360d5158f NA Primary Tumor C3L-05221.WGS.N C3L-05221 LSCC WGS blood_normal CPT0298260002 CPT0298260002.WholeGenome.RP-2158.bam 22543254031 BAM NA 6fc63f53-736e-4508-8f63-fd2228c5c161 af9a936f245fb8331427f1437e0d111e hg19 Blood Derived Normal +C3L-05221.WGS.N.hg38 C3L-05221 LSCC WGS blood_normal CPT0298260002 7efd2357-2f36-4670-a8ab-4ec4a050505c_wgs_gdc_realn.bam 66900222214 BAM NA bc4fff91-13c2-4c76-b669-6f556586d88e 39c3ac32b2328ef22d2864da975d06f5 hg38 Blood Derived Normal C3L-05221.WGS.T C3L-05221 LSCC WGS tumor CPT0298140006 CPT0298140006.WholeGenome.RP-2158.bam 26197423404 BAM NA 8c282023-004c-43b1-95e6-e441ac94356e 8cdfcfd6bb4bb0dce5029a55c9389177 hg19 Primary Tumor +C3L-05221.WGS.T.hg38 C3L-05221 LSCC WGS tumor CPT0298140006 9bce91ec-f097-488c-9886-3163d276fbb8_wgs_gdc_realn.bam 77795009663 BAM NA 72499411-41a2-4232-a610-13c98262b69e 7855edacfb8517960464be9557d5fa56 hg38 Primary Tumor C3L-05221.WXS.A C3L-05221 LSCC WXS tissue_normal CPT0298170006 CPT0298170006.WholeExome.RP-1303.bam 20840313599 BAM NA cc3f2cef-cdb2-4998-9875-6b15f0295d66 b6371335b40542b9cfe7741383ed08e4 hg19 Solid Tissue Normal C3L-05221.WXS.N C3L-05221 LSCC WXS blood_normal CPT0298260002 CPT0298260002.WholeExome.RP-1303.bam 32315288661 BAM NA b18d9853-dab7-476b-b102-1319c3b66d54 b976b11d36ac61690b94f4d393e50e82 hg19 Blood Derived Normal C3L-05221.WXS.T C3L-05221 LSCC WXS tumor CPT0298140006 CPT0298140006.WholeExome.RP-1303.bam 20914443903 BAM NA 47b2be8a-9dca-4a1b-88d0-886683fc7d53 1504c114940bf4898e3cf082ed9a8c8e hg19 Primary Tumor @@ -14273,7 +14580,9 @@ C3L-05225.MethArray.Green.T C3L-05225 LSCC Methylation Array tumor CPT0296570006 C3L-05225.MethArray.Red.A C3L-05225 LSCC Methylation Array tissue_normal CPT0296620006 204367490043_R08C01_Red.idat 13677880 IDAT Red 962c368a-e66f-4fdd-a327-191bade4ad46 b1680b921cb1ad13c8cd54b5a17a4de0 NA Solid Tissue Normal C3L-05225.MethArray.Red.T C3L-05225 LSCC Methylation Array tumor CPT0296570006 204367470127_R06C01_Red.idat 13677890 IDAT Red 489ddbdd-0ac6-4dee-b207-57348b451a9f 7fd7c10b6ff475430587c95161db8027 NA Primary Tumor C3L-05225.miRNA-Seq.A C3L-05225 LSCC miRNA-Seq tissue_normal CPT0296620009 200513_UNC31-K00269_0278_BHH7Y7BBXY_GTAGAG_S17_L005_R1_001.unaln.bam 214693904 BAM NA 382f9835-1260-45bc-b737-9e11cdd1be4f 12dbd31fea9ae888825f91866646d411 NA Solid Tissue Normal +C3L-05225.miRNA-Seq.A.hg38 C3L-05225 LSCC miRNA-Seq tissue_normal CPT0296620009 c3edcb7c-7d8f-4592-8110-6a612c194ed1_mirnaseq_gdc_realn.bam 241073081 BAM NA 72c885d8-c0e3-4280-9a23-79b869f4587b 7d2947180819212272477aeccaffb8cc hg38 Solid Tissue Normal C3L-05225.miRNA-Seq.T C3L-05225 LSCC miRNA-Seq tumor CPT0296570009 200224_UNC31-K00269_0267_AHC722BBXY_TACAGC_S43_L007_R1_001.unaln.bam 209078641 BAM NA dcd7b867-b5ef-40cd-bd22-11ea8393c1df 6a4432dcfcf943dd8120c725660a6ea6 NA Primary Tumor +C3L-05225.miRNA-Seq.T.hg38 C3L-05225 LSCC miRNA-Seq tumor CPT0296570009 fa422711-a088-4ddc-b5c3-05158f13e275_mirnaseq_gdc_realn.bam 231859610 BAM NA 4bcd04dd-cd7e-412d-b407-db8cba3bd8b8 2f7ebf51b9d250f2fe790d8a73491f4d hg38 Primary Tumor C3L-05225.RNA-Seq.R1.A C3L-05225 LSCC RNA-Seq tissue_normal CPT0296620009 200505_UNC32-K00270_0246_BHH5F5BBXY_TAATACAG-ATATTCAC_S4_L001_R1_001.fastq.gz 3442419307 FASTQ NA 63c26280-83e5-40ef-90fa-dea67fca8d54 3b585578bc90a18e52d864419d0879a3 NA Solid Tissue Normal C3L-05225.RNA-Seq.R1.T C3L-05225 LSCC RNA-Seq tumor CPT0296570009 200428_UNC32-K00270_0243_AHG3Y3BBXY_AAGATACT-ACTTACAT_S11_L003_R1_001.fastq.gz 3827548599 FASTQ NA e06570ec-7adf-4b8e-80ff-f70a7eec89b0 67663c6fefe4d4073c1a73b5702e5328 NA Primary Tumor C3L-05225.RNA-Seq.R2.A C3L-05225 LSCC RNA-Seq tissue_normal CPT0296620009 200505_UNC32-K00270_0246_BHH5F5BBXY_TAATACAG-ATATTCAC_S4_L001_R2_001.fastq.gz 4166052663 FASTQ NA 2656afbf-4bb5-47df-882d-696754d8467c 974a43467ca2811f8eaa5eb525612995 NA Solid Tissue Normal @@ -14281,6 +14590,8 @@ C3L-05225.RNA-Seq.R2.T C3L-05225 LSCC RNA-Seq tumor CPT0296570009 200428_UNC32-K C3L-05225.WGS.N C3L-05225 LSCC WGS blood_normal CPT0296690002 CPT0296690002.WholeGenome.RP-2158.bam 24312447365 BAM NA a82d3175-e8fd-49cc-9690-82aaf509900c f7a0efcc5025ea374d50d01484a13186 hg19 Blood Derived Normal C3L-05225.WGS.N C3L-05225 LSCC WGS blood_normal CPT0296690002 CPT0296690002.WholeGenome.RP-2158.bam 24349130461 BAM NA 8b8d2e54-0b9f-4416-9222-064df84934f2 8f36aba81e2c64ba144afde152f85b32 hg19 Blood Derived Normal C3L-05225.WGS.T C3L-05225 LSCC WGS tumor CPT0296570006 CPT0296570006.WholeGenome.RP-2158.bam 24721244623 BAM NA 09238d79-48b5-4c48-9bb2-1d590a96fdb7 186acfe93838890615d3a7cd95cea1d9 hg19 Primary Tumor +C3L-05225.WGS.T.hg38 C3L-05225 LSCC WGS tumor CPT0296570006 81cdcf02-73f2-42cc-9306-818c9c6869ae_wgs_gdc_realn.bam 72293079183 BAM NA 03956b75-1a7a-4dda-aec7-6efa70957bc1 20bc654bb10d11a16ace40fbda068dc8 hg38 Primary Tumor +C3L-05225.WXS.A C3L-05225 LSCC WXS tissue_normal CPT0296620006 CPT0296620006.WholeExome.RP-1303.bam 34160697217 BAM NA d51787a4-cf91-41ca-a2ce-308282e93fd0 fccbccbac01a2184672cc2a8075281ea hg19 Solid Tissue Normal C3L-05225.WXS.N C3L-05225 LSCC WXS blood_normal CPT0296690002 CPT0296690002.WholeExome.RP-1303.bam 23421613179 BAM NA ff3e74d6-38f7-47cb-8ac2-ab3179fab838 c94fcc8a130221e9936adcfe21f14a6f hg19 Blood Derived Normal C3L-05225.WXS.T C3L-05225 LSCC WXS tumor CPT0296570006 CPT0296570006.WholeExome.RP-1303.bam 19475882881 BAM NA 987e1444-ba3d-41f6-b6c2-ed0e9392416f 20deaa0b8dbf19f272d23fa389b477d3 hg19 Primary Tumor C3L-05369.MethArray.Green.A C3L-05369 LSCC Methylation Array tissue_normal CPT0294480006 204372030015_R04C01_Grn.idat 13677905 IDAT Green f5a79f0d-1a10-43d8-963c-685f261d9d66 b9796189bbec29d0836d54392b69c525 NA Solid Tissue Normal @@ -14288,13 +14599,17 @@ C3L-05369.MethArray.Green.T C3L-05369 LSCC Methylation Array tumor CPT0294450006 C3L-05369.MethArray.Red.A C3L-05369 LSCC Methylation Array tissue_normal CPT0294480006 204372030015_R04C01_Red.idat 13677905 IDAT Red e2441776-a26a-483c-8d57-aebbd971647f 5896f469e52418e090c9bc7232d3c67b NA Solid Tissue Normal C3L-05369.MethArray.Red.T C3L-05369 LSCC Methylation Array tumor CPT0294450006 204367470131_R05C01_Red.idat 13677880 IDAT Red 9ec5ad37-2dcb-497f-92e4-bb1cbf9dfc07 4d566258ad83d849a7b30ed7f882c294 NA Primary Tumor C3L-05369.miRNA-Seq.A C3L-05369 LSCC miRNA-Seq tissue_normal CPT0294480009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CGGAAT_S37_L006_R1_001.unaln.bam 298923371 BAM NA 4fc9cbb0-1abc-43ba-85f7-c50da2f7fc16 1b8014bcbb16192bfbbe9346b6fa503d NA Solid Tissue Normal +C3L-05369.miRNA-Seq.A.hg38 C3L-05369 LSCC miRNA-Seq tissue_normal CPT0294480009 a6045ff1-f560-4245-9d6a-6c33fac9c855_mirnaseq_gdc_realn.bam 332144186 BAM NA b6b24ec4-5596-4143-8bfd-6f3a1e800ed0 f0e62c0691ef252cb0e48a5a14dfb235 hg38 Solid Tissue Normal C3L-05369.miRNA-Seq.T C3L-05369 LSCC miRNA-Seq tumor CPT0294450009 200325_UNC31-K00269_0272_AHHC2NBBXY_TACAGC_S19_L001_R1_001.unaln.bam 214404384 BAM NA 41f91b2e-603c-47dd-98a9-284aeffd84af 22c1f68524de7eea20da8408dd4e4e83 NA Primary Tumor +C3L-05369.miRNA-Seq.T.hg38 C3L-05369 LSCC miRNA-Seq tumor CPT0294450009 cb095284-9f4b-4911-859b-68d96f6b1eeb_mirnaseq_gdc_realn.bam 236555962 BAM NA 32dc2d41-e5a9-4461-8a87-2d461d71b89e 5ee4a44672d96e7cc50b8c499c27e611 hg38 Primary Tumor C3L-05369.RNA-Seq.R1.A C3L-05369 LSCC RNA-Seq tissue_normal CPT0294480009 200505_UNC32-K00270_0246_BHH5F5BBXY_TCGTAGTG-AGACTTGG_S24_L006_R1_001.fastq.gz 3843385000 FASTQ NA 23c565cb-ff39-4479-ba64-97c7208229d7 c326656ebb885bd7cf3e7a395ec4403c NA Solid Tissue Normal C3L-05369.RNA-Seq.R1.T C3L-05369 LSCC RNA-Seq tumor CPT0294450009 200428_UNC31-K00269_0275_AHGCJVBBXY_GTATGTTC-AACAGGAA_S27_L007_R1_001.fastq.gz 3566418089 FASTQ NA ba9f0249-aaf6-4c46-8dc5-ec1a00ac7f7c db5b8aaa4e8591fdce377da5724599bb NA Primary Tumor C3L-05369.RNA-Seq.R2.A C3L-05369 LSCC RNA-Seq tissue_normal CPT0294480009 200505_UNC32-K00270_0246_BHH5F5BBXY_TCGTAGTG-AGACTTGG_S24_L006_R2_001.fastq.gz 4754527121 FASTQ NA 9a8c552c-380a-4986-9f2d-f753e921b4fd 3d06eab17b5b4caab970444411d022c9 NA Solid Tissue Normal C3L-05369.RNA-Seq.R2.T C3L-05369 LSCC RNA-Seq tumor CPT0294450009 200428_UNC31-K00269_0275_AHGCJVBBXY_GTATGTTC-AACAGGAA_S27_L007_R2_001.fastq.gz 3657828327 FASTQ NA 341a6501-69f2-414c-895f-a6f6b917dc1e 84dd6b96e268586e1f41adf6cfc1302d NA Primary Tumor C3L-05369.WGS.N C3L-05369 LSCC WGS blood_normal CPT0294570002 CPT0294570002.WholeGenome.RP-2158.bam 24966812548 BAM NA d45011cb-cc8f-4973-bcb0-09c7332b85f5 af07abd4d3ad41b1582b3bdeeacdae3f hg19 Blood Derived Normal +C3L-05369.WGS.N.hg38 C3L-05369 LSCC WGS blood_normal CPT0294570002 60330a1e-b890-4080-b328-a426cc600b86_wgs_gdc_realn.bam 74854230798 BAM NA fd313034-153a-492c-9e39-5991db231b8b 9f1fe9867e3b7d7a945c7896f757fc91 hg38 Blood Derived Normal C3L-05369.WGS.T C3L-05369 LSCC WGS tumor CPT0294450006 CPT0294450006.WholeGenome.RP-2158.bam 26784354118 BAM NA 293e5adf-8355-4331-9748-4fba8f0e393f 2d1d61d3933f123dd44333cf92567900 hg19 Primary Tumor +C3L-05369.WGS.T.hg38 C3L-05369 LSCC WGS tumor CPT0294450006 d9f0103e-5df7-4f8e-a564-57886f38b001_wgs_gdc_realn.bam 76677003279 BAM NA 7a47cd4e-a586-4eb0-a8ce-65488b2b034e 82e0a2029667b28f5975d5f8a481301a hg38 Primary Tumor C3L-05369.WXS.A C3L-05369 LSCC WXS tissue_normal CPT0294480006 CPT0294480006.WholeExome.RP-1303.bam 21216108412 BAM NA 72a6bde7-9cd0-41c3-9afe-e03494e1b812 7b7813483f9d623753d32c139ed4107a hg19 Solid Tissue Normal C3L-05369.WXS.N C3L-05369 LSCC WXS blood_normal CPT0294570002 CPT0294570002.WholeExome.RP-1303.bam 26241030335 BAM NA ba00f75e-adf8-4546-9997-f8ed0f657a0e 7e888b3b58e637f6dcf829e0fcec2172 hg19 Blood Derived Normal C3L-05369.WXS.T C3L-05369 LSCC WXS tumor CPT0294450006 CPT0294450006.WholeExome.RP-1303.bam 24727318124 BAM NA ca9120ab-aa99-497f-b095-0d2a4f95437f e9571f202624f830b3d2b125900370d8 hg19 Primary Tumor @@ -14320,13 +14635,17 @@ C3L-05392.MethArray.Green.T C3L-05392 LSCC Methylation Array tumor CPT0291630006 C3L-05392.MethArray.Red.A C3L-05392 LSCC Methylation Array tissue_normal CPT0291650006 204367490043_R07C01_Red.idat 13677880 IDAT Red b2c69dca-9b74-41ab-9278-da57c9db35ae e2d663a9a85f6ea6e0b4180e23118ca7 NA Solid Tissue Normal C3L-05392.MethArray.Red.T C3L-05392 LSCC Methylation Array tumor CPT0291630006 204367490093_R07C01_Red.idat 13677900 IDAT Red df4bac2f-67e7-4eda-8fdd-b489b0a22be6 20a2c24c3d5ba6fe50e5024b68d714d3 NA Primary Tumor C3L-05392.miRNA-Seq.A C3L-05392 LSCC miRNA-Seq tissue_normal CPT0291650009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CAGGCG_S33_L006_R1_001.unaln.bam 175455034 BAM NA be6d8666-d594-42b9-8543-e05ab2312ece 6ca50302dc2d060332b5a4e5ff0b1bf4 NA Solid Tissue Normal +C3L-05392.miRNA-Seq.A.hg38 C3L-05392 LSCC miRNA-Seq tissue_normal CPT0291650009 6b65d0b5-e056-4859-812b-4e7633bc7209_mirnaseq_gdc_realn.bam 197979085 BAM NA edbdaca7-16fc-4954-84a1-b2a2feae2803 a5c639033b6d8a939f63ed58f6b9c155 hg38 Solid Tissue Normal C3L-05392.miRNA-Seq.T C3L-05392 LSCC miRNA-Seq tumor CPT0291630009 200325_UNC31-K00269_0272_AHHC2NBBXY_CAAAAG_S4_L001_R1_001.unaln.bam 198358022 BAM NA ecde02aa-9c6c-4174-b417-48c67d74e720 7cbeb32b4d5f32cfdc48f0e2bd1024b4 NA Primary Tumor +C3L-05392.miRNA-Seq.T.hg38 C3L-05392 LSCC miRNA-Seq tumor CPT0291630009 5df162d1-cfe4-401b-8b2d-9c1400d6b387_mirnaseq_gdc_realn.bam 222906673 BAM NA 7ccbc0dc-368f-42d6-bbba-8adb04ff5e12 3b0510a29338ee3419b0e4eeeaa4b25d hg38 Primary Tumor C3L-05392.RNA-Seq.R1.A C3L-05392 LSCC RNA-Seq tissue_normal CPT0291650009 200505_UNC32-K00270_0246_BHH5F5BBXY_TACCGAGG-CCTGAACT_S20_L005_R1_001.fastq.gz 3855943575 FASTQ NA 359e3754-8a38-4bb2-ab30-f45104721810 de0695cc9f97993699daf35d522085a1 NA Solid Tissue Normal C3L-05392.RNA-Seq.R1.T C3L-05392 LSCC RNA-Seq tumor CPT0291630009 200428_UNC31-K00269_0275_AHGCJVBBXY_GACGTCTT-GGTTCACC_S12_L003_R1_001.fastq.gz 4109366063 FASTQ NA a09393b8-579c-4c23-aaf9-0601c79d9bca d6456fd8df3cd39b593e4e5dab0aa77c NA Primary Tumor C3L-05392.RNA-Seq.R2.A C3L-05392 LSCC RNA-Seq tissue_normal CPT0291650009 200505_UNC32-K00270_0246_BHH5F5BBXY_TACCGAGG-CCTGAACT_S20_L005_R2_001.fastq.gz 4857414271 FASTQ NA dca97796-2c4c-4d14-8074-a9614c031baf d3d6c7efd1f417555f754850af3ea80f NA Solid Tissue Normal C3L-05392.RNA-Seq.R2.T C3L-05392 LSCC RNA-Seq tumor CPT0291630009 200428_UNC31-K00269_0275_AHGCJVBBXY_GACGTCTT-GGTTCACC_S12_L003_R2_001.fastq.gz 4321086964 FASTQ NA 1c3d507a-a999-446e-a60c-f1d0861764ee 47fbe7de7ecf697f6ad76056d2c6a565 NA Primary Tumor C3L-05392.WGS.N C3L-05392 LSCC WGS blood_normal CPT0291760002 CPT0291760002.WholeGenome.RP-2158.bam 24914133422 BAM NA d83e9394-8f7d-4a75-a2ab-15aa2988911c e6cf8a01411897fbe046ea58c57128d4 hg19 Blood Derived Normal +C3L-05392.WGS.N.hg38 C3L-05392 LSCC WGS blood_normal CPT0291760002 74d7b8bf-5f4b-4e3e-841e-5d59c2afba8a_wgs_gdc_realn.bam 73845649668 BAM NA 1b5199ab-2746-4ae7-ba6a-aacdf07a0429 e0364f88436f2896171333cf650d34b1 hg38 Blood Derived Normal C3L-05392.WGS.T C3L-05392 LSCC WGS tumor CPT0291630006 CPT0291630006.WholeGenome.RP-2158.bam 23806348550 BAM NA 3b63f153-6139-448d-aef3-3834c5f9f27c cc3c4954a67be5a3b9211643ff7f5f23 hg19 Primary Tumor +C3L-05392.WGS.T.hg38 C3L-05392 LSCC WGS tumor CPT0291630006 345fba5f-2345-40ab-9d42-ffd0a47db599_wgs_gdc_realn.bam 71296704798 BAM NA 309533ab-d9a0-45eb-af78-d80eca0bcd5f ccec747f641b5dd8b204caf275e2212a hg38 Primary Tumor C3L-05392.WXS.A C3L-05392 LSCC WXS tissue_normal CPT0291650006 CPT0291650006.WholeExome.RP-1303.bam 25155561823 BAM NA 6f53d7a2-54bd-4caf-9fd5-2ecb4fbdee15 ba50b4d25bf71300949d596103af541d hg19 Solid Tissue Normal C3L-05392.WXS.N C3L-05392 LSCC WXS blood_normal CPT0291760002 CPT0291760002.WholeExome.RP-1303.bam 26780582386 BAM NA 224a3baa-7897-43e0-8319-8853697dcf5f f02e52426903dd8474b19b58128ece08 hg19 Blood Derived Normal C3L-05392.WXS.T C3L-05392 LSCC WXS tumor CPT0291630006 CPT0291630006.WholeExome.RP-1303.bam 24036915098 BAM NA df4e4b90-f2c6-4fb8-8aa3-a404b6c15a87 84424b1924cb49b718245a9f9da69ced hg19 Primary Tumor @@ -14335,6 +14654,7 @@ C3L-05393.MethArray.Green.T C3L-05393 LSCC Methylation Array tumor CPT0290280006 C3L-05393.MethArray.Red.A C3L-05393 LSCC Methylation Array tissue_normal CPT0290320006 204367490029_R07C01_Red.idat 13677885 IDAT Red 75a7dbe6-12ee-4d3c-a4a2-8a30413e30ee bb59f2925686e4f846e0cd96763845fb NA Solid Tissue Normal C3L-05393.MethArray.Red.T C3L-05393 LSCC Methylation Array tumor CPT0290280006 204372030015_R07C01_Red.idat 13677905 IDAT Red 05d068c9-a079-484f-bbfa-4f58f5dd38c2 6dde0520e389091a5dee473171d1fd63 NA Primary Tumor C3L-05393.miRNA-Seq.A C3L-05393 LSCC miRNA-Seq tissue_normal CPT0290320009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CACGAT_S31_L006_R1_001.unaln.bam 292359300 BAM NA ee36f3a8-9d30-4382-91ee-8aa98c19cebf 73ca64516b58e619ad4e0931e32f071b NA Solid Tissue Normal +C3L-05393.miRNA-Seq.A.hg38 C3L-05393 LSCC miRNA-Seq tissue_normal CPT0290320009 fc22af7e-9c49-4ee2-baa1-a926f0df35f1_mirnaseq_gdc_realn.bam 324474160 BAM NA 1ea3360d-adba-441f-8e71-4a9c14c8ff79 4fe23e6af1fd82c63bb8c1765d6cb601 hg38 Solid Tissue Normal C3L-05393.miRNA-Seq.T C3L-05393 LSCC miRNA-Seq tumor CPT0290280009 200325_UNC31-K00269_0272_AHHC2NBBXY_ATGAGC_S2_L001_R1_001.unaln.bam 161582929 BAM NA 6d56707f-1228-46cb-b2c7-5fac92d9b03f 7881c758956d5b763ea025dfdc28a444 NA Primary Tumor C3L-05393.miRNA-Seq.T C3L-05393 LSCC miRNA-Seq tumor CPT0290280009 200526_UNC32-K00270_0248_BHH7WFBBXY_ATGAGC_S1_L001_R1_001.unaln.bam 143249433 BAM NA bf4ed63a-209e-4a22-8004-f80b0352815b bb5ca3eb0f19c1d6eaae6f6d1555ff2c NA Primary Tumor C3L-05393.RNA-Seq.R1.A C3L-05393 LSCC RNA-Seq tissue_normal CPT0290320009 200505_UNC32-K00270_0246_BHH5F5BBXY_GGCATTCT-CTAGCTTG_S15_L004_R1_001.fastq.gz 3453640744 FASTQ NA b4c58689-6157-4915-a5e8-e2d2016488ee 1f5960d4090eb4d76ca5a6a6058a60fd NA Solid Tissue Normal @@ -14344,6 +14664,7 @@ C3L-05393.RNA-Seq.R2.T C3L-05393 LSCC RNA-Seq tumor CPT0290280009 200428_UNC31-K C3L-05393.WGS.N C3L-05393 LSCC WGS blood_normal CPT0291290002 CPT0291290002.WholeGenome.RP-2158.bam 36053093360 BAM NA 62bf051a-4479-441c-8a19-c39bfc635713 9422a363b0424cab8eeeeed9473c3b52 hg19 Blood Derived Normal C3L-05393.WGS.N C3L-05393 LSCC WGS blood_normal CPT0291290002 CPT0291290002.WholeGenome.RP-2158.bam 36111111145 BAM NA 70d39eb6-7162-4cb4-b839-0ccadfa3b5f8 12e26ba310b2e5108423e7d8c6e053b8 hg19 Blood Derived Normal C3L-05393.WGS.T C3L-05393 LSCC WGS tumor CPT0290280006 CPT0290280006.WholeGenome.RP-2158.bam 25554045184 BAM NA 77545a0a-f712-4f77-90f3-3e11dec9f6bd eb6fcccc15dd0406b50acd61be9818e7 hg19 Primary Tumor +C3L-05393.WGS.T.hg38 C3L-05393 LSCC WGS tumor CPT0290280006 07739423-62a4-4b10-a9ce-de37a40ece88_wgs_gdc_realn.bam 75911524851 BAM NA 33ef5b1e-3163-41e2-b8f3-056172b5e654 13a6324db5995caed6d4db10fc68a5e7 hg38 Primary Tumor C3L-05393.WXS.A C3L-05393 LSCC WXS tissue_normal CPT0290320006 CPT0290320006.WholeExome.RP-1303.bam 27268091527 BAM NA 4dab4f9c-7079-4b23-a877-b148ffdcdb7a cbea451992780be27aee421e67a74c0d hg19 Solid Tissue Normal C3L-05393.WXS.N C3L-05393 LSCC WXS blood_normal CPT0291290002 CPT0291290002.WholeExome.RP-1303.bam 25291640186 BAM NA 203b0362-1004-4bc8-8c1c-9ccca51ec425 4375cc2bede9fa54d2277c4bf6dc81bb hg19 Blood Derived Normal C3L-05393.WXS.T C3L-05393 LSCC WXS tumor CPT0290280006 CPT0290280006.WholeExome.RP-1303.bam 22510925701 BAM NA a9b6e06f-b1ad-414e-aa53-5de5b616ecaa ae68a7814f2d70cc4ca7d15930e92b97 hg19 Primary Tumor @@ -14352,6 +14673,7 @@ C3L-05394.MethArray.Green.T C3L-05394 LSCC Methylation Array tumor CPT0291310006 C3L-05394.MethArray.Red.A C3L-05394 LSCC Methylation Array tissue_normal CPT0291470006 204367490029_R08C01_Red.idat 13677885 IDAT Red c5430109-4558-4e10-9908-185184863b37 72f675f6282dcef54f30fa94407f4099 NA Solid Tissue Normal C3L-05394.MethArray.Red.T C3L-05394 LSCC Methylation Array tumor CPT0291310006 204372030024_R07C01_Red.idat 13677905 IDAT Red 18c77e2f-50fb-4e93-b9e5-b53ed82c8fe0 536f4339199ee1131ab4eb2b1cec7499 NA Primary Tumor C3L-05394.miRNA-Seq.A C3L-05394 LSCC miRNA-Seq tissue_normal CPT0291470009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CACTCA_S32_L006_R1_001.unaln.bam 261587417 BAM NA 1289c18c-0ac7-4850-81d2-4826d65e9722 bc50f3f747242db0fd6d291e776909ed NA Solid Tissue Normal +C3L-05394.miRNA-Seq.A.hg38 C3L-05394 LSCC miRNA-Seq tissue_normal CPT0291470009 541dd904-eb6e-46bd-8ac6-e81b5af2d5f9_mirnaseq_gdc_realn.bam 294014583 BAM NA 86b19e89-f3ee-43d2-8b4d-d0d69661792a b8334d7febc1ad966977c35f094b71bc hg38 Solid Tissue Normal C3L-05394.miRNA-Seq.T C3L-05394 LSCC miRNA-Seq tumor CPT0291310009 200325_UNC31-K00269_0272_AHHC2NBBXY_ATTCCT_S3_L001_R1_001.unaln.bam 148926599 BAM NA f618b210-587b-494f-abb0-ea39465b3588 db5a87ef32e31828ff97169398ff734f NA Primary Tumor C3L-05394.miRNA-Seq.T C3L-05394 LSCC miRNA-Seq tumor CPT0291310009 200526_UNC32-K00270_0248_BHH7WFBBXY_ATTCCT_S2_L001_R1_001.unaln.bam 135528627 BAM NA 417a9012-f772-4948-862e-49080422e1e8 82128a37050178dc0f95e709db56f313 NA Primary Tumor C3L-05394.RNA-Seq.R1.A C3L-05394 LSCC RNA-Seq tissue_normal CPT0291470009 200505_UNC32-K00270_0246_BHH5F5BBXY_AATGCCTC-TCGATCCA_S13_L004_R1_001.fastq.gz 3695094357 FASTQ NA d45c61c9-dbeb-4b69-99f2-cb3fc507d2e4 82c743e6cdd2e02235ea4d60185d9834 NA Solid Tissue Normal @@ -14359,7 +14681,10 @@ C3L-05394.RNA-Seq.R1.T C3L-05394 LSCC RNA-Seq tumor CPT0291310009 200428_UNC31-K C3L-05394.RNA-Seq.R2.A C3L-05394 LSCC RNA-Seq tissue_normal CPT0291470009 200505_UNC32-K00270_0246_BHH5F5BBXY_AATGCCTC-TCGATCCA_S13_L004_R2_001.fastq.gz 4457552008 FASTQ NA 76e1c6df-9cd5-4ba2-857f-48fb3a3f24a3 b0ee10eb8cdbc8cfa719292784c5dced NA Solid Tissue Normal C3L-05394.RNA-Seq.R2.T C3L-05394 LSCC RNA-Seq tumor CPT0291310009 200428_UNC31-K00269_0275_AHGCJVBBXY_AGTACTCC-AACCTGTT_S11_L003_R2_001.fastq.gz 3889134637 FASTQ NA 8e103b76-ff3a-4295-9043-aeab73954d21 b74fd579b2b67dc9a7530493d8814f19 NA Primary Tumor C3L-05394.WGS.N C3L-05394 LSCC WGS blood_normal CPT0291580002 CPT0291580002.WholeGenome.RP-2158.bam 29237077219 BAM NA e8168ade-b21c-4f25-944c-9ec9071fd3dc ea5a3be1f942e20cd514dfccb7c090f6 hg19 Blood Derived Normal +C3L-05394.WGS.N.hg38 C3L-05394 LSCC WGS blood_normal CPT0291580002 9b3dd1c0-f10d-41a8-8dfd-3a069eb847ce_wgs_gdc_realn.bam 86067227450 BAM NA b5981ecb-e6bb-4c3b-aaf1-2cac92483bf8 34982803bf99f590821ac21a62c5e8ca hg38 Blood Derived Normal C3L-05394.WGS.T C3L-05394 LSCC WGS tumor CPT0291310006 CPT0291310006.WholeGenome.RP-2158.bam 24070384674 BAM NA 390b128b-7731-40b1-8234-7d768dd895b4 648e80223fb66ae733991c434050ee25 hg19 Primary Tumor +C3L-05394.WGS.T.hg38 C3L-05394 LSCC WGS tumor CPT0291310006 72bc503d-d1c6-443a-a983-db1eb773c3d6_wgs_gdc_realn.bam 68332351002 BAM NA a02b7815-fd4e-4a5c-b42a-3d4e5bb59346 649dd1e47f9ce538248920f5a3f5797b hg38 Primary Tumor +C3L-05394.WXS.A C3L-05394 LSCC WXS tissue_normal CPT0291470006 CPT0291470006.WholeExome.RP-1303.bam 39540660403 BAM NA c732a001-9eb7-4e51-94e5-7b3bddb24755 c4cd7d908f91c3e9db15a84793888236 hg19 Solid Tissue Normal C3L-05394.WXS.N C3L-05394 LSCC WXS blood_normal CPT0291580002 CPT0291580002.WholeExome.RP-1303.bam 30922185737 BAM NA 9ed66654-d524-4de7-8881-2619947b9fbb b288857a41691f08df2f4e8fb52465f8 hg19 Blood Derived Normal C3L-05394.WXS.T C3L-05394 LSCC WXS tumor CPT0291310006 CPT0291310006.WholeExome.RP-1303.bam 19228086514 BAM NA bd129931-5108-4d8e-81fe-d28447171d9a 592d7de405b077b39e7ed2ceed92e7aa hg19 Primary Tumor C3L-05397.MethArray.Green.A C3L-05397 LSCC Methylation Array tissue_normal CPT0289970006 204372030139_R07C01_Grn.idat 13677880 IDAT Green f71f8223-a362-42df-a4c2-d80ace5e7668 d25a333ec16e3011c6f99ec17428dd1e NA Solid Tissue Normal @@ -14367,13 +14692,17 @@ C3L-05397.MethArray.Green.T C3L-05397 LSCC Methylation Array tumor CPT0289940006 C3L-05397.MethArray.Red.A C3L-05397 LSCC Methylation Array tissue_normal CPT0289970006 204372030139_R07C01_Red.idat 13677880 IDAT Red d3c1b475-221a-42a1-9c64-affebaf397e2 89d2e54312c5dc600ed0a7be76727de6 NA Solid Tissue Normal C3L-05397.MethArray.Red.T C3L-05397 LSCC Methylation Array tumor CPT0289940006 204367470157_R06C01_Red.idat 13677880 IDAT Red e9ff38d3-2060-400c-9cf4-706d0c9f1567 282a4defbf9a4ebf689a6538a8ff0b67 NA Primary Tumor C3L-05397.miRNA-Seq.A C3L-05397 LSCC miRNA-Seq tissue_normal CPT0289970009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CACCGG_S30_L006_R1_001.unaln.bam 215175819 BAM NA 84d9c207-1aff-4a0c-9cda-8b61ae10c019 bfae984677c3cc89e9e523f8e9619906 NA Solid Tissue Normal +C3L-05397.miRNA-Seq.A.hg38 C3L-05397 LSCC miRNA-Seq tissue_normal CPT0289970009 63467abd-b13f-4657-8dbd-e6452e2c3325_mirnaseq_gdc_realn.bam 242562457 BAM NA 0f7a95ff-4115-4541-abba-309000996323 4edaed7b411bb9ce3b2b31ca6fa83061 hg38 Solid Tissue Normal C3L-05397.miRNA-Seq.T C3L-05397 LSCC miRNA-Seq tumor CPT0289940009 200325_UNC31-K00269_0272_AHHC2NBBXY_ACTGAT_S1_L001_R1_001.unaln.bam 233867305 BAM NA b3bffd97-e745-428d-9c86-692ec242a210 141052f6622cfaad53d6861fdf26c4c4 NA Primary Tumor +C3L-05397.miRNA-Seq.T.hg38 C3L-05397 LSCC miRNA-Seq tumor CPT0289940009 cd9281fd-a48e-4338-a0d1-2c1535d94336_mirnaseq_gdc_realn.bam 266074621 BAM NA c8c8bad5-7f93-4e19-90b1-9e9c5f19b8d7 2a3d02393a0509af19333e32e5c02959 hg38 Primary Tumor C3L-05397.RNA-Seq.R1.A C3L-05397 LSCC RNA-Seq tissue_normal CPT0289970009 200505_UNC32-K00270_0246_BHH5F5BBXY_TTACAGGA-TGACAAGC_S16_L004_R1_001.fastq.gz 4417718201 FASTQ NA 1b529f0d-edb3-4bf6-8dfe-ca4a677128d0 445d2393e882fdcda66b6660938bfae6 NA Solid Tissue Normal C3L-05397.RNA-Seq.R1.T C3L-05397 LSCC RNA-Seq tumor CPT0289940009 200428_UNC31-K00269_0275_AHGCJVBBXY_CAATTAAC-CGAGATAT_S9_L003_R1_001.fastq.gz 4063269281 FASTQ NA bb6600c1-f592-415f-9155-f9960a85e71d c594ef69c71838a0d93d7f7541bc2be0 NA Primary Tumor C3L-05397.RNA-Seq.R2.A C3L-05397 LSCC RNA-Seq tissue_normal CPT0289970009 200505_UNC32-K00270_0246_BHH5F5BBXY_TTACAGGA-TGACAAGC_S16_L004_R2_001.fastq.gz 5301940546 FASTQ NA 22fa13f7-d267-4e8b-a38f-cf0bfcab2b04 dff1759f45b2a79721ca5abe6070e140 NA Solid Tissue Normal C3L-05397.RNA-Seq.R2.T C3L-05397 LSCC RNA-Seq tumor CPT0289940009 200428_UNC31-K00269_0275_AHGCJVBBXY_CAATTAAC-CGAGATAT_S9_L003_R2_001.fastq.gz 4215380053 FASTQ NA c0b8ab1b-0380-4814-98bb-1f51e2cfefec f8fc95585f169192d886be7e58d158ec NA Primary Tumor C3L-05397.WGS.N C3L-05397 LSCC WGS blood_normal CPT0290060002 CPT0290060002.WholeGenome.RP-2158.bam 20043165656 BAM NA ac8c750b-5805-4927-94cb-9cd7864b7135 cebd6e5bc8654b2d55339f3775950859 hg19 Blood Derived Normal +C3L-05397.WGS.N.hg38 C3L-05397 LSCC WGS blood_normal CPT0290060002 b722d6b5-e10d-4dc5-8cbf-4aacdcfbb671_wgs_gdc_realn.bam 58919124493 BAM NA 051ce0e0-be4e-4962-b5e0-6ec0e635ea84 4fd98483194ec3ea8eb44cc28f713ebe hg38 Blood Derived Normal C3L-05397.WGS.T C3L-05397 LSCC WGS tumor CPT0289940006 CPT0289940006.WholeGenome.RP-2158.bam 28240835053 BAM NA 0cf704f0-b7c4-46f9-be72-065803dea054 0981ba86a0a23ee4f11ca9f863c4492f hg19 Primary Tumor +C3L-05397.WGS.T.hg38 C3L-05397 LSCC WGS tumor CPT0289940006 4bf7649f-7956-4173-a0b0-ba1eff0a0d4c_wgs_gdc_realn.bam 83225735323 BAM NA 286bfa90-9947-4972-9dd2-f0a5fe7734b4 1be19d37bc00d3fee418430aef827cd7 hg38 Primary Tumor C3L-05397.WXS.A C3L-05397 LSCC WXS tissue_normal CPT0289970006 CPT0289970006.WholeExome.RP-1303.bam 19556400616 BAM NA 1b91f3eb-52d9-4665-9125-c3d336dafeca 7b1a9f9a0082d0db89b96ba92c4edabd hg19 Solid Tissue Normal C3L-05397.WXS.N C3L-05397 LSCC WXS blood_normal CPT0290060002 CPT0290060002.WholeExome.RP-1303.bam 27642083555 BAM NA 9a220737-17e2-498c-bd75-5bd068e34e93 f87fea6518d63dfc3e8d0bef74690d82 hg19 Blood Derived Normal C3L-05397.WXS.T C3L-05397 LSCC WXS tumor CPT0289940006 CPT0289940006.WholeExome.RP-1303.bam 29432979706 BAM NA 4406282a-186e-4eee-a331-f7832bae201c 8b1ee5033c630bce61bbc167dbf562c3 hg19 Primary Tumor @@ -14382,12 +14711,15 @@ C3L-05398.MethArray.Green.T C3L-05398 LSCC Methylation Array tumor CPT0289770006 C3L-05398.MethArray.Red.A C3L-05398 LSCC Methylation Array tissue_normal CPT0289780006 204367490066_R08C01_Red.idat 13677900 IDAT Red 87157b6d-b6bb-46d8-bb94-f13b38a0213d adb38cd15ef721eb1045e867ffadc7fe NA Solid Tissue Normal C3L-05398.MethArray.Red.T C3L-05398 LSCC Methylation Array tumor CPT0289770006 204367490030_R05C01_Red.idat 13677885 IDAT Red 12409130-5ff9-49a5-bf97-81e9a1018425 04462a33d38f290c23411b9e9a723894 NA Primary Tumor C3L-05398.miRNA-Seq.A C3L-05398 LSCC miRNA-Seq tissue_normal CPT0289780009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CAACTA_S29_L006_R1_001.unaln.bam 254959213 BAM NA 19714bee-4277-4547-8b8e-352e7f57afe9 19e04a2ecc0e41ee7e55884663de1b97 NA Solid Tissue Normal +C3L-05398.miRNA-Seq.A.hg38 C3L-05398 LSCC miRNA-Seq tissue_normal CPT0289780009 c6ef0b24-64c9-4615-81e8-a721c058b08f_mirnaseq_gdc_realn.bam 282678508 BAM NA 08c31a82-d751-4ed7-aea7-0f2b152d4f54 5cd5aa956a18ae54c037cf2468dd2bc3 hg38 Solid Tissue Normal C3L-05398.miRNA-Seq.T C3L-05398 LSCC miRNA-Seq tumor CPT0289770009 200224_UNC31-K00269_0267_AHC722BBXY_GGTAGC_S24_L006_R1_001.unaln.bam 209853782 BAM NA faf6655c-3b07-4a33-bb38-e2b65612e852 b5706589cc0e49275169b4189fc5c239 NA Primary Tumor +C3L-05398.miRNA-Seq.T.hg38 C3L-05398 LSCC miRNA-Seq tumor CPT0289770009 0f86b032-ad3c-4b3d-8a3e-24543c9c18dc_mirnaseq_gdc_realn.bam 231977990 BAM NA cb1cab26-0c9c-4080-8ad6-a410e0f4b1f5 dede333cd823d4d14b88a0e0141b5022 hg38 Primary Tumor C3L-05398.RNA-Seq.R1.A C3L-05398 LSCC RNA-Seq tissue_normal CPT0289780009 200505_UNC32-K00270_0246_BHH5F5BBXY_CCGTGAAG-CAGTGGAT_S14_L004_R1_001.fastq.gz 4347614522 FASTQ NA 559e0a4d-43e7-4356-8844-a67519deb855 b8a24e8d813eaa182abd4af8acfadc95 NA Solid Tissue Normal C3L-05398.RNA-Seq.R1.T C3L-05398 LSCC RNA-Seq tumor CPT0289770009 200428_UNC31-K00269_0275_AHGCJVBBXY_GTCTACAC-GCCAAGGT_S8_L002_R1_001.fastq.gz 4516879160 FASTQ NA a764f9f2-fbb8-412e-a9d6-ddbe753b6c34 4b4d895e771c3ac3a51928696b48ce56 NA Primary Tumor C3L-05398.RNA-Seq.R2.A C3L-05398 LSCC RNA-Seq tissue_normal CPT0289780009 200505_UNC32-K00270_0246_BHH5F5BBXY_CCGTGAAG-CAGTGGAT_S14_L004_R2_001.fastq.gz 5305242192 FASTQ NA 518ff125-0abf-4891-9441-934761829e97 6c0511574fbf79f558bf7eaa39784d9f NA Solid Tissue Normal C3L-05398.RNA-Seq.R2.T C3L-05398 LSCC RNA-Seq tumor CPT0289770009 200428_UNC31-K00269_0275_AHGCJVBBXY_GTCTACAC-GCCAAGGT_S8_L002_R2_001.fastq.gz 4841907943 FASTQ NA efe1ce9f-52c4-4fe9-973a-4f8fdee733cd 61dbb12da6d389d6e65f0e56f3cdb8d9 NA Primary Tumor C3L-05398.WGS.N C3L-05398 LSCC WGS blood_normal CPT0289890002 CPT0289890002.WholeGenome.RP-2158.bam 22166431043 BAM NA afe82521-b42a-4564-a57d-60a3c973d526 9593638f0233431b9771c57d37191951 hg19 Blood Derived Normal +C3L-05398.WGS.N.hg38 C3L-05398 LSCC WGS blood_normal CPT0289890002 b2d4cbfa-fc45-4f6c-b41d-675846d7c828_wgs_gdc_realn.bam 65940184957 BAM NA f3085b9f-ee54-42e0-8e81-374a8cdbee7a c77414e792da1050339d90fe33133356 hg38 Blood Derived Normal C3L-05398.WGS.T C3L-05398 LSCC WGS tumor CPT0289770006 CPT0289770006.WholeGenome.RP-2158.bam 35078359327 BAM NA 29e6c3e4-832f-420f-a93e-2333cf07d63c 6aabbe7a31cd3472494df69113a1e91d hg19 Primary Tumor C3L-05398.WGS.T C3L-05398 LSCC WGS tumor CPT0289770006 CPT0289770006.WholeGenome.RP-2158.bam 35133235492 BAM NA 7b405845-2218-4029-9702-3363067a5c59 5f8f2b693f3e64169d97ba6ad64bca4c hg19 Primary Tumor C3L-05398.WXS.A C3L-05398 LSCC WXS tissue_normal CPT0289780006 CPT0289780006.WholeExome.RP-1303.bam 19832566311 BAM NA 97d462dc-0034-4e26-8ad3-7d148acb4048 5099014ad6554ddcfad3be8891d80821 hg19 Solid Tissue Normal @@ -14398,27 +14730,36 @@ C3L-05399.MethArray.Green.T C3L-05399 LSCC Methylation Array tumor CPT0292150009 C3L-05399.MethArray.Red.A C3L-05399 LSCC Methylation Array tissue_normal CPT0292210006 204367490084_R08C01_Red.idat 13677890 IDAT Red ece08d1d-a570-48bb-ab95-aaeed5e8399a 5d968694f7833f640aa35c526e573f29 NA Solid Tissue Normal C3L-05399.MethArray.Red.T C3L-05399 LSCC Methylation Array tumor CPT0292150009 204367490090_R05C01_Red.idat 13677885 IDAT Red 575a9a8d-2dea-43f3-b33c-26ed7a783769 062bdf52e7f94cacc52eb0c5a3fce98b NA Primary Tumor C3L-05399.miRNA-Seq.A C3L-05399 LSCC miRNA-Seq tissue_normal CPT0292210009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CATTTT_S35_L006_R1_001.unaln.bam 246593540 BAM NA 7a25d892-dd46-42fe-87ae-3c0d8f6de190 7bbf7317ec2baec9b4137a61313fd11a NA Solid Tissue Normal +C3L-05399.miRNA-Seq.A.hg38 C3L-05399 LSCC miRNA-Seq tissue_normal CPT0292210009 08cb4000-0b8f-4c9a-bfa2-a9b748fb296b_mirnaseq_gdc_realn.bam 275549651 BAM NA 04fc4299-3fc6-4fa7-b490-579e42ec465e d31c3a2c87cb351cb6e0b1635afaf502 hg38 Solid Tissue Normal C3L-05399.miRNA-Seq.T C3L-05399 LSCC miRNA-Seq tumor CPT0292150006 200224_UNC31-K00269_0267_AHC722BBXY_GCCAAT_S6_L006_R1_001.unaln.bam 256427944 BAM NA df259b80-70fc-4d88-8e11-f673b9183e99 cafcdb2a4b3746bcc3530ff2ecfdcfdc NA Primary Tumor +C3L-05399.miRNA-Seq.T.hg38 C3L-05399 LSCC miRNA-Seq tumor CPT0292150006 5c939937-4bfa-4ada-bc15-0ea949ba843f_mirnaseq_gdc_realn.bam 285826870 BAM NA 17e8cfd0-2f7a-4254-8f25-272d63502c3a bfa6c0ad19cbf65b357dbd9b8c89e062 hg38 Primary Tumor C3L-05399.RNA-Seq.R1.A C3L-05399 LSCC RNA-Seq tissue_normal CPT0292210009 200505_UNC32-K00270_0246_BHH5F5BBXY_AGCCTCAT-AGTAGAGA_S17_L005_R1_001.fastq.gz 4375558197 FASTQ NA 54b80256-8772-4b8d-9a7f-ebe7fd0df3f9 b41e20884df30ff3d9379e19023aed26 NA Solid Tissue Normal C3L-05399.RNA-Seq.R1.T C3L-05399 LSCC RNA-Seq tumor CPT0292150006 200428_UNC32-K00270_0243_AHG3Y3BBXY_TGGTGGCA-TCCTGTAA_S22_L006_R1_001.fastq.gz 3771340480 FASTQ NA 3cc607b5-5a8e-4109-ac61-0059723dbfa6 722bc509d4a5918124de4778b06d0849 NA Primary Tumor C3L-05399.RNA-Seq.R2.A C3L-05399 LSCC RNA-Seq tissue_normal CPT0292210009 200505_UNC32-K00270_0246_BHH5F5BBXY_AGCCTCAT-AGTAGAGA_S17_L005_R2_001.fastq.gz 5243812287 FASTQ NA 8d4dbbef-5e02-4842-aeec-e5c0ab187b00 0734dfd836ed6fc484c675a6b76d6336 NA Solid Tissue Normal C3L-05399.RNA-Seq.R2.T C3L-05399 LSCC RNA-Seq tumor CPT0292150006 200428_UNC32-K00270_0243_AHG3Y3BBXY_TGGTGGCA-TCCTGTAA_S22_L006_R2_001.fastq.gz 3965071810 FASTQ NA 896aac7d-de87-4317-ab43-c555fae45f42 d408ea1fa04b5885c6d41c20390f1145 NA Primary Tumor C3L-05399.WGS.N C3L-05399 LSCC WGS blood_normal CPT0292300002 CPT0292300002.WholeGenome.RP-2158.bam 29098002847 BAM NA f4cf7ae7-71fe-47b2-b355-32ec611bab04 ed1ecc10769cb4801cc5558776f91a30 hg19 Blood Derived Normal +C3L-05399.WGS.N.hg38 C3L-05399 LSCC WGS blood_normal CPT0292300002 b7a0ca13-78c2-4771-a5ed-4cf45eeb5b64_wgs_gdc_realn.bam 84751565821 BAM NA dd68a938-11e8-40d0-b712-e83bde34b0bf 33f33a1a541438b04e7ab25047670b21 hg38 Blood Derived Normal C3L-05399.WGS.T C3L-05399 LSCC WGS tumor CPT0292150009 CPT0292150009.WholeGenome.RP-2158.bam 28893837928 BAM NA b0cab097-d50e-4eca-a5a4-f794bca0288c 254307958ba942f644c3936031a1b491 hg19 Primary Tumor +C3L-05399.WGS.T.hg38 C3L-05399 LSCC WGS tumor CPT0292150009 c2f89f93-a3b2-468e-b80c-a997cbb57d30_wgs_gdc_realn.bam 85471524467 BAM NA 85ba706e-0a65-4b72-ac67-50864ea65870 648e271d936b5231e89790631698214f hg38 Primary Tumor C3L-05399.WXS.A C3L-05399 LSCC WXS tissue_normal CPT0292210006 CPT0292210006.WholeExome.RP-1303.bam 19598352377 BAM NA 51d7a3c5-c897-4ca8-a5a8-ac1df00d4b91 69619567c09049d88f332218441c1cb9 hg19 Solid Tissue Normal +C3L-05399.WXS.N C3L-05399 LSCC WXS blood_normal CPT0292300002 CPT0292300002.WholeExome.RP-1303.bam 52531235106 BAM NA b9e1541b-420f-4c8f-9aa4-3ea9732607e6 17d66f0fd9908be6e30ec1a305e4e580 hg19 Blood Derived Normal C3L-05399.WXS.T C3L-05399 LSCC WXS tumor CPT0292150009 CPT0292150009.WholeExome.RP-1303.bam 18100035542 BAM NA bb80f316-fe41-47d5-8159-d3d79be1dd81 c9b8061c210080d2a83451dd5e665d65 hg19 Primary Tumor C3L-05411.MethArray.Green.A C3L-05411 LSCC Methylation Array tissue_normal CPT0294290006 204372030023_R07C01_Grn.idat 13677895 IDAT Green bbc7541e-0daf-4ef3-ae41-edc6460fdf2c 15457df52b4c434e9ebffcf4536620b6 NA Solid Tissue Normal C3L-05411.MethArray.Green.T C3L-05411 LSCC Methylation Array tumor CPT0293160006 204372030013_R05C01_Grn.idat 13677895 IDAT Green cc0a69f1-0af1-44d7-b3b6-7528492ce610 776ae4c72cdd9b41dbb6181e0dd9b116 NA Primary Tumor C3L-05411.MethArray.Red.A C3L-05411 LSCC Methylation Array tissue_normal CPT0294290006 204372030023_R07C01_Red.idat 13677895 IDAT Red ecf872d8-23bc-4668-b25e-2f79ad61d7ab 23b9ecf52343ef80e203852b9ca0e438 NA Solid Tissue Normal C3L-05411.MethArray.Red.T C3L-05411 LSCC Methylation Array tumor CPT0293160006 204372030013_R05C01_Red.idat 13677895 IDAT Red d94fc078-d252-40b8-adf7-fb945d638907 a991d2b6a5231baef6b03b18cb6981b4 NA Primary Tumor C3L-05411.miRNA-Seq.A C3L-05411 LSCC miRNA-Seq tissue_normal CPT0294290009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CCAACA_S36_L006_R1_001.unaln.bam 269057680 BAM NA 1d7385ea-e700-48fb-a323-e260e0db87a5 239d1bec258b98e9ae1eea94572a3009 NA Solid Tissue Normal +C3L-05411.miRNA-Seq.A.hg38 C3L-05411 LSCC miRNA-Seq tissue_normal CPT0294290009 33b214a7-e157-4d31-abde-627c50d76713_mirnaseq_gdc_realn.bam 301914047 BAM NA 464567ec-27db-4e9f-8d01-325863113294 57b6650edfd32930295ad314b1dd73c7 hg38 Solid Tissue Normal C3L-05411.miRNA-Seq.T C3L-05411 LSCC miRNA-Seq tumor CPT0293160009 200325_UNC31-K00269_0272_AHHC2NBBXY_GACGAC_S17_L001_R1_001.unaln.bam 227657933 BAM NA 049338ba-5110-4839-9bf8-bbc9cb0edece 28398fe2352469cc2f060e8f2aa24f53 NA Primary Tumor +C3L-05411.miRNA-Seq.T.hg38 C3L-05411 LSCC miRNA-Seq tumor CPT0293160009 8c83d60f-98d3-4be1-93b2-63c47802e40a_mirnaseq_gdc_realn.bam 245528846 BAM NA 22636ca5-07f5-46fe-a9f8-fde9791def46 a8aa1151571a6c748c2c70e35b6736db hg38 Primary Tumor C3L-05411.RNA-Seq.R1.A C3L-05411 LSCC RNA-Seq tissue_normal CPT0294290009 200505_UNC32-K00270_0246_BHH5F5BBXY_GATTCTGC-GACGAGAG_S19_L005_R1_001.fastq.gz 3405054575 FASTQ NA 3342b740-1f04-480f-ae1d-17341e98ca9c e36ab2e1455c26a56d7941f4b6bc7230 NA Solid Tissue Normal C3L-05411.RNA-Seq.R1.T C3L-05411 LSCC RNA-Seq tumor CPT0293160009 200428_UNC31-K00269_0275_AHGCJVBBXY_TATCGCAC-CTTAGTGT_S25_L007_R1_001.fastq.gz 4245426142 FASTQ NA 07570cfe-95d4-4547-8a49-cd0f32374d58 0136716eb226361f36c4e77326e86b72 NA Primary Tumor C3L-05411.RNA-Seq.R2.A C3L-05411 LSCC RNA-Seq tissue_normal CPT0294290009 200505_UNC32-K00270_0246_BHH5F5BBXY_GATTCTGC-GACGAGAG_S19_L005_R2_001.fastq.gz 4128482183 FASTQ NA 14c35597-59b5-44df-8544-f586ecdd6ec1 bfab8a1bd0869c59b0efcc61d514f9ca NA Solid Tissue Normal C3L-05411.RNA-Seq.R2.T C3L-05411 LSCC RNA-Seq tumor CPT0293160009 200428_UNC31-K00269_0275_AHGCJVBBXY_TATCGCAC-CTTAGTGT_S25_L007_R2_001.fastq.gz 4377701426 FASTQ NA 78f30461-f5e1-4177-a3c4-4b4b1c55ad62 efdbb535018865096ae737c0a74c31a0 NA Primary Tumor C3L-05411.WGS.N C3L-05411 LSCC WGS blood_normal CPT0294390002 CPT0294390002.WholeGenome.RP-2158.bam 20306842382 BAM NA 2fb8bd38-6383-4b84-a2fa-a50a00d2f3b7 eb6f4c8d561d3f0878e591d0462c8a79 hg19 Blood Derived Normal +C3L-05411.WGS.N.hg38 C3L-05411 LSCC WGS blood_normal CPT0294390002 1cf403f3-2850-4007-b4c2-996b29398e5f_wgs_gdc_realn.bam 59429608256 BAM NA 02318ce0-ed93-4b52-8861-f1bad1b7927f 827896e74e77e3166f6bbb6731f35a3a hg38 Blood Derived Normal C3L-05411.WGS.T C3L-05411 LSCC WGS tumor CPT0293160006 CPT0293160006.WholeGenome.RP-2158.bam 22658753532 BAM NA f056e279-87b9-4570-b509-a22a26f90d15 23c801c10b4af93220eefa8d91e7b7cc hg19 Primary Tumor +C3L-05411.WGS.T.hg38 C3L-05411 LSCC WGS tumor CPT0293160006 bbc687be-ab91-452e-a017-229e2202463f_wgs_gdc_realn.bam 68111853652 BAM NA 93a1dc32-4c45-44e1-bf2b-5680b7a955b9 eb19765f08cf7ceeaae71d13b1247a45 hg38 Primary Tumor C3L-05411.WXS.A C3L-05411 LSCC WXS tissue_normal CPT0294290006 CPT0294290006.WholeExome.RP-1303.bam 23111264672 BAM NA f4f098f3-22bc-4c5a-8019-87eefba52bc4 ed7cd4fba60717e09c766c39eb84f869 hg19 Solid Tissue Normal C3L-05411.WXS.N C3L-05411 LSCC WXS blood_normal CPT0294390002 CPT0294390002.WholeExome.RP-1303.bam 25141306514 BAM NA 21adfdc3-55f0-4b3e-a75d-421851b9c011 88d93ca5f15485174fbde647286bbe7a hg19 Blood Derived Normal C3L-05411.WXS.T C3L-05411 LSCC WXS tumor CPT0293160006 CPT0293160006.WholeExome.RP-1303.bam 28796980033 BAM NA 69e466fc-0c93-462d-a702-99e5d8c956fa f17373010a3e8e384935d7fc0738cd8a hg19 Primary Tumor @@ -14427,13 +14768,17 @@ C3L-05417.MethArray.Green.T C3L-05417 LSCC Methylation Array tumor CPT0328450006 C3L-05417.MethArray.Red.A C3L-05417 LSCC Methylation Array tissue_normal CPT0328490006 204367490056_R08C01_Red.idat 13677895 IDAT Red 1220adfa-be55-48d7-a8f4-34c0342fd52f e2eb2c1c5cbb4b7f12fb2f1ecf339e69 NA Solid Tissue Normal C3L-05417.MethArray.Red.T C3L-05417 LSCC Methylation Array tumor CPT0328450006 204367490084_R05C01_Red.idat 13677890 IDAT Red 6f9b985f-5626-4030-97e2-171175bda3d3 11ead99ae4d8a717d33eac9ddb8046c8 NA Primary Tumor C3L-05417.miRNA-Seq.A C3L-05417 LSCC miRNA-Seq tissue_normal CPT0328490009 200513_UNC31-K00269_0278_BHH7Y7BBXY_ATGAGC_S26_L006_R1_001.unaln.bam 172910619 BAM NA 93f4b83c-cf41-4fcf-800c-8751b028f5ff e1f9cadcc5df42329123ceaa6b1a7c39 NA Solid Tissue Normal +C3L-05417.miRNA-Seq.A.hg38 C3L-05417 LSCC miRNA-Seq tissue_normal CPT0328490009 7b6568f2-d2f8-496b-8965-e50c61dabb8d_mirnaseq_gdc_realn.bam 188351234 BAM NA a91ddb39-b62d-411e-9639-d583ddf2de07 338bd0d0461be34c8c65aa3181a12f7a hg38 Solid Tissue Normal C3L-05417.miRNA-Seq.T C3L-05417 LSCC miRNA-Seq tumor CPT0328450009 200513_UNC31-K00269_0278_BHH7Y7BBXY_TCATTC_S45_L006_R1_001.unaln.bam 186403407 BAM NA 6eb0206d-c576-4309-824e-7fc06b94e3b0 0905b3e29560749de4d6e43c1e71ef02 NA Primary Tumor +C3L-05417.miRNA-Seq.T.hg38 C3L-05417 LSCC miRNA-Seq tumor CPT0328450009 f306f1de-ae6e-49b6-ae75-47f89122a04d_mirnaseq_gdc_realn.bam 205717521 BAM NA 377a346b-e261-4f32-9c3a-82953eecf03a a2e2f1e9fa6a465bccbf957fa87049b1 hg38 Primary Tumor C3L-05417.RNA-Seq.R1.A C3L-05417 LSCC RNA-Seq tissue_normal CPT0328490009 200505_UNC32-K00270_0246_BHH5F5BBXY_GTCGGAGC-GGTTATAA_S11_L003_R1_001.fastq.gz 3275553191 FASTQ NA 47b8fcfb-4b58-4787-8d6f-f5b583d4de85 81b33c9737b53f749c2f6cfe5a16f9da NA Solid Tissue Normal C3L-05417.RNA-Seq.R1.T C3L-05417 LSCC RNA-Seq tumor CPT0328450009 200505_UNC32-K00270_0246_BHH5F5BBXY_ATGGCATG-AAGGTACC_S30_L008_R1_001.fastq.gz 4088607192 FASTQ NA 5920b4ba-74d8-4ccb-8183-fc1c4fc07b8d 49599a5fd637b39fe60abd9e481ffd12 NA Primary Tumor C3L-05417.RNA-Seq.R2.A C3L-05417 LSCC RNA-Seq tissue_normal CPT0328490009 200505_UNC32-K00270_0246_BHH5F5BBXY_GTCGGAGC-GGTTATAA_S11_L003_R2_001.fastq.gz 4086797292 FASTQ NA 987d6444-de01-4a5e-8fd7-b634ed325946 f21ee00a7268548edfc3cdb137377993 NA Solid Tissue Normal C3L-05417.RNA-Seq.R2.T C3L-05417 LSCC RNA-Seq tumor CPT0328450009 200505_UNC32-K00270_0246_BHH5F5BBXY_ATGGCATG-AAGGTACC_S30_L008_R2_001.fastq.gz 5175218640 FASTQ NA d727d5e2-2348-44a1-bfd4-6560fe45cf58 afb63e2944b2c5471c71ffe580f59ccc NA Primary Tumor C3L-05417.WGS.N C3L-05417 LSCC WGS blood_normal CPT0328590002 CPT0328590002.WholeGenome.RP-2158.bam 32329743122 BAM NA cd63e13c-c29e-4b71-b869-7c05f20cbb2d 78239c03adca13d8a851c68627ae914a hg19 Blood Derived Normal +C3L-05417.WGS.N.hg38 C3L-05417 LSCC WGS blood_normal CPT0328590002 e23f6a2d-a1b0-4d06-8422-e974a789d4c9_wgs_gdc_realn.bam 98268443888 BAM NA de2db24a-2b8b-46a0-80dd-d624854d697b ef2ed42197d185b504f1d971500d3e76 hg38 Blood Derived Normal C3L-05417.WGS.T C3L-05417 LSCC WGS tumor CPT0328450006 CPT0328450006.WholeGenome.RP-2158.bam 25818367007 BAM NA 98939581-465f-4811-ab8f-6dec3e8982b3 cb2508c1981f68dcf6868bd675c51a85 hg19 Primary Tumor +C3L-05417.WGS.T.hg38 C3L-05417 LSCC WGS tumor CPT0328450006 216d2dbb-6bc1-4860-ab70-6fe360188711_wgs_gdc_realn.bam 73162076025 BAM NA ae569a6e-4c00-49af-b9cb-523c4af30ba9 d5b8543ef4d05c3cc099f61541a0dd99 hg38 Primary Tumor C3L-05417.WXS.A C3L-05417 LSCC WXS tissue_normal CPT0328490006 CPT0328490006.WholeExome.RP-1303.bam 21746804577 BAM NA 3a95f3a5-b4ea-4ca0-88a0-1c61694398dc a437cd7fcbf9866d8f4ffb8c981e6c42 hg19 Solid Tissue Normal C3L-05417.WXS.N C3L-05417 LSCC WXS blood_normal CPT0328590002 CPT0328590002.WholeExome.RP-1303.bam 19303925202 BAM NA 6060588b-41e7-4dd9-9664-94e289138d58 2449ee6a2484e1400572af0d950329c5 hg19 Blood Derived Normal C3L-05417.WXS.T C3L-05417 LSCC WXS tumor CPT0328450006 CPT0328450006.WholeExome.RP-1303.bam 20982682894 BAM NA 99a34aa7-6a5c-4630-b95a-b4a74b4946c7 138f96e82811672999838c8de251b773 hg19 Primary Tumor @@ -14442,13 +14787,17 @@ C3L-05420.MethArray.Green.T C3L-05420 LSCC Methylation Array tumor CPT0291980006 C3L-05420.MethArray.Red.A C3L-05420 LSCC Methylation Array tissue_normal CPT0292020006 204367490048_R08C01_Red.idat 13677885 IDAT Red 758edcf0-55f0-4dbf-9e69-d5c5bff78352 bd606855aeba11272855ed9f2f5c8fbe NA Solid Tissue Normal C3L-05420.MethArray.Red.T C3L-05420 LSCC Methylation Array tumor CPT0291980006 204367490043_R05C01_Red.idat 13677880 IDAT Red 9afc67a0-5cfe-48ec-a756-15586f9f5209 feed436a35ba17a96388c477f1e46771 NA Primary Tumor C3L-05420.miRNA-Seq.A C3L-05420 LSCC miRNA-Seq tissue_normal CPT0292020009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CATGGC_S34_L006_R1_001.unaln.bam 234287785 BAM NA 4d27d9ef-e49a-4fef-a2a7-f2d8e9cf37ee 8ad75342afa25acc07d4df4e1b33aa6c NA Solid Tissue Normal +C3L-05420.miRNA-Seq.A.hg38 C3L-05420 LSCC miRNA-Seq tissue_normal CPT0292020009 d5ddd596-21a2-4470-a89b-acf47035a3f0_mirnaseq_gdc_realn.bam 263638212 BAM NA 6960c0ad-945a-4677-a37e-c2bd451b77aa 426a7761a723814fae359c1f11451f76 hg38 Solid Tissue Normal C3L-05420.miRNA-Seq.T C3L-05420 LSCC miRNA-Seq tumor CPT0291980009 200325_UNC31-K00269_0272_AHHC2NBBXY_CACCGG_S6_L001_R1_001.unaln.bam 249602173 BAM NA 82e6d604-6f17-4851-ad6b-4fe435fe9fb4 bce53c2790882897b3a1565591e649ba NA Primary Tumor +C3L-05420.miRNA-Seq.T.hg38 C3L-05420 LSCC miRNA-Seq tumor CPT0291980009 e1a0938f-0147-487d-8114-7c9c92babfff_mirnaseq_gdc_realn.bam 269847098 BAM NA d63ed244-083f-4167-b763-ad28d8253ba5 063b566daaa8e4ef11105ee13353b055 hg38 Primary Tumor C3L-05420.RNA-Seq.R1.A C3L-05420 LSCC RNA-Seq tissue_normal CPT0292020009 200505_UNC32-K00270_0246_BHH5F5BBXY_CGTTAGAA-TTCAGGTC_S18_L005_R1_001.fastq.gz 3846356115 FASTQ NA 0e305113-918e-44db-b305-707f5caf6fe2 739152f4ab0cff5ef45919070ef88499 NA Solid Tissue Normal C3L-05420.RNA-Seq.R1.T C3L-05420 LSCC RNA-Seq tumor CPT0291980009 200428_UNC31-K00269_0275_AHGCJVBBXY_CATAGAGT-TGCCACCA_S14_L004_R1_001.fastq.gz 3695335244 FASTQ NA c00ad80f-877c-4092-8150-37a3277af987 d41bd516abcdd563f98d591aa527fbfc NA Primary Tumor C3L-05420.RNA-Seq.R2.A C3L-05420 LSCC RNA-Seq tissue_normal CPT0292020009 200505_UNC32-K00270_0246_BHH5F5BBXY_CGTTAGAA-TTCAGGTC_S18_L005_R2_001.fastq.gz 4873807125 FASTQ NA 0cd31933-c48b-4ad4-8fb4-002b4db21496 fe8027dbef56655d3fe79eee466b91e8 NA Solid Tissue Normal C3L-05420.RNA-Seq.R2.T C3L-05420 LSCC RNA-Seq tumor CPT0291980009 200428_UNC31-K00269_0275_AHGCJVBBXY_CATAGAGT-TGCCACCA_S14_L004_R2_001.fastq.gz 3904269143 FASTQ NA c2735bdb-f91e-4e67-a535-fd0210870666 d224af1bd0515d5b821f954153f15fe9 NA Primary Tumor C3L-05420.WGS.N C3L-05420 LSCC WGS blood_normal CPT0292120002 CPT0292120002.WholeGenome.RP-2158.bam 29184075501 BAM NA eeb6c62f-88d6-46e7-8a7d-7c5627fca1cf 133aef7885e3856c549b9e537cc0a470 hg19 Blood Derived Normal +C3L-05420.WGS.N.hg38 C3L-05420 LSCC WGS blood_normal CPT0292120002 1a3a6a41-a4d3-4b76-9184-5cede7fcb0bf_wgs_gdc_realn.bam 86668734517 BAM NA eb81c000-0d62-401f-83f3-6bebe143f74f 542cf7f9c563507659f03e4ac5202f7b hg38 Blood Derived Normal C3L-05420.WGS.T C3L-05420 LSCC WGS tumor CPT0291980006 CPT0291980006.WholeGenome.RP-2158.bam 23944172250 BAM NA cf84cdb6-12cf-4d2c-8cc5-7cf576db0d9f 6edee1b626c463cfd9d8806db8d75eb5 hg19 Primary Tumor +C3L-05420.WGS.T.hg38 C3L-05420 LSCC WGS tumor CPT0291980006 7d038235-f19b-4a5c-9fff-f7fd27f8acbb_wgs_gdc_realn.bam 71263591027 BAM NA c3dfec9d-0f22-434f-82ce-08a0a919146f 8fabd3211163c3ff9646b55cfddce775 hg38 Primary Tumor C3L-05420.WXS.A C3L-05420 LSCC WXS tissue_normal CPT0292020006 CPT0292020006.WholeExome.RP-1303.bam 20508112154 BAM NA 5c189c9d-d16f-47e2-a395-8770b69822d2 57ae4d5e6f7e230d9c09af1e4d1efe80 hg19 Solid Tissue Normal C3L-05420.WXS.N C3L-05420 LSCC WXS blood_normal CPT0292120002 CPT0292120002.WholeExome.RP-1303.bam 27636108898 BAM NA 7c309a74-07f2-4d54-88d1-04b716acede6 5eb0daf18ea9d94210b3d492f380aaa5 hg19 Blood Derived Normal C3L-05420.WXS.T C3L-05420 LSCC WXS tumor CPT0291980006 CPT0291980006.WholeExome.RP-1303.bam 30760178958 BAM NA 3519efb0-cd3d-42b9-b39d-3875684a6249 cff104abbe30c530658259f02d1d05cb hg19 Primary Tumor @@ -14457,6 +14806,7 @@ C3L-05422.MethArray.Green.T C3L-05422 LSCC Methylation Array tumor CPT0282750006 C3L-05422.MethArray.Red.A C3L-05422 LSCC Methylation Array tissue_normal CPT0282760006 204367470157_R07C01_Red.idat 13677880 IDAT Red 25cbad9a-9e39-4e5e-bf09-af24960de3db 885296fda016299165928bfd6aa21ae2 NA Solid Tissue Normal C3L-05422.MethArray.Red.T C3L-05422 LSCC Methylation Array tumor CPT0282750006 204372030011_R05C01_Red.idat 13677890 IDAT Red 026ab295-640b-4eb1-9fcd-7193054b73f2 24f9870300bbb47e0b3fde10497f37fd NA Primary Tumor C3L-05422.miRNA-Seq.A C3L-05422 LSCC miRNA-Seq tissue_normal CPT0282760009 200513_UNC31-K00269_0278_BHH7Y7BBXY_TAGCTT_S22_L005_R1_001.unaln.bam 241429224 BAM NA 66f62135-ee2e-430c-beea-05ab9c3fd9ea 4d311577c0bc71b0fd980220ea2b70a4 NA Solid Tissue Normal +C3L-05422.miRNA-Seq.A.hg38 C3L-05422 LSCC miRNA-Seq tissue_normal CPT0282760009 ae215573-c2ad-4153-adf7-6b715401eb1d_mirnaseq_gdc_realn.bam 265323216 BAM NA e1a490f6-a07e-4905-9aec-011940f3d1b8 8aa6442fa832a73adf32e2a0b7e41f96 hg38 Solid Tissue Normal C3L-05422.miRNA-Seq.T C3L-05422 LSCC miRNA-Seq tumor CPT0282750009 200224_UNC31-K00269_0267_AHC722BBXY_GTCCGC_S18_L006_R1_001.unaln.bam 146024716 BAM NA 7db14e54-f5e1-44a9-8c6c-2fa854e77f6c 8777248151df24581a40d8cd16ceeeea NA Primary Tumor C3L-05422.miRNA-Seq.T C3L-05422 LSCC miRNA-Seq tumor CPT0282750009 200526_UNC32-K00270_0248_BHH7WFBBXY_GTCCGC_S14_L001_R1_001.unaln.bam 138996698 BAM NA 577aecd2-8b8d-471a-b9be-7f6f1045506a 1db07931a12aff824ff922f073970332 NA Primary Tumor C3L-05422.RNA-Seq.R1.A C3L-05422 LSCC RNA-Seq tissue_normal CPT0282760009 200505_UNC32-K00270_0245_AHH5FVBBXY_GACCTGAA-TTGGTGAG_S10_L007_R1_001.fastq.gz 4180932305 FASTQ NA edf97ae2-81b1-4e6f-9cde-b240d6c53e2d a5adfbcd9c8b724ad9faf8a8720cbeff NA Solid Tissue Normal @@ -14464,7 +14814,9 @@ C3L-05422.RNA-Seq.R1.T C3L-05422 LSCC RNA-Seq tumor CPT0282750009 200428_UNC31-K C3L-05422.RNA-Seq.R2.A C3L-05422 LSCC RNA-Seq tissue_normal CPT0282760009 200505_UNC32-K00270_0245_AHH5FVBBXY_GACCTGAA-TTGGTGAG_S10_L007_R2_001.fastq.gz 4412938656 FASTQ NA d9ee245f-9d2e-4b9b-a400-6b63d59023e2 9c01eb15a282ce766d226b9a7ac1d0f0 NA Solid Tissue Normal C3L-05422.RNA-Seq.R2.T C3L-05422 LSCC RNA-Seq tumor CPT0282750009 200428_UNC31-K00269_0275_AHGCJVBBXY_GTGTCGGA-GCTTGCGC_S2_L001_R2_001.fastq.gz 3953983587 FASTQ NA bdb1fa42-9e3e-4d2c-81ff-6bc23edfff98 e6a04f53ecd09463f7c5433ad5ccfaa7 NA Primary Tumor C3L-05422.WGS.N C3L-05422 LSCC WGS blood_normal CPT0282870002 CPT0282870002.WholeGenome.RP-2158.bam 20527970747 BAM NA 53c13f63-138e-40ab-9e08-b81eeceebc01 1a58a6c570761dd6b22df8494f069ca7 hg19 Blood Derived Normal +C3L-05422.WGS.N.hg38 C3L-05422 LSCC WGS blood_normal CPT0282870002 58dbf06a-1bc2-493f-905b-956771ec2bc8_wgs_gdc_realn.bam 60388857773 BAM NA 493be082-54f7-41a0-b48b-8282e4c88bcd 1e775aba3d149b7c145ee7fc26c2be92 hg38 Blood Derived Normal C3L-05422.WGS.T C3L-05422 LSCC WGS tumor CPT0282750006 CPT0282750006.WholeGenome.RP-2158.bam 21849410222 BAM NA 19aee1e9-f55a-4d5e-9714-a6785cc901d1 131523ea97ef6f558f134d9e428bf8f9 hg19 Primary Tumor +C3L-05422.WGS.T.hg38 C3L-05422 LSCC WGS tumor CPT0282750006 e1adca1b-d3ed-4a3c-9461-ba555f6dc9d5_wgs_gdc_realn.bam 64155383213 BAM NA 2f28496f-496d-4306-a731-b78675e1c6f5 8a9ece80062a0144f57e16f0e73c4a20 hg38 Primary Tumor C3L-05422.WXS.A C3L-05422 LSCC WXS tissue_normal CPT0282760006 CPT0282760006.WholeExome.RP-1303.bam 24151527536 BAM NA f80c05e1-c7bc-479f-ba63-ae2ea88863ac 39beb78883083b42fa5e3b18aec7e076 hg19 Solid Tissue Normal C3L-05422.WXS.N C3L-05422 LSCC WXS blood_normal CPT0282870002 CPT0282870002.WholeExome.RP-1303.bam 23894423966 BAM NA 27416987-3453-46d0-a825-9825f82f5632 15972ab29783aca213d27829f579b0a9 hg19 Blood Derived Normal C3L-05422.WXS.T C3L-05422 LSCC WXS tumor CPT0282750006 CPT0282750006.WholeExome.RP-1303.bam 27829649619 BAM NA d5f95c55-28e2-4c56-a9d7-af2fb8b5be47 fc6a2d772c7b8d456d0107c47469fb99 hg19 Primary Tumor @@ -14473,13 +14825,18 @@ C3L-05423.MethArray.Green.T C3L-05423 LSCC Methylation Array tumor CPT0282910006 C3L-05423.MethArray.Red.A C3L-05423 LSCC Methylation Array tissue_normal CPT0282940006 204367490057_R07C01_Red.idat 13677905 IDAT Red ae984167-376d-45ec-a5eb-87c076eb32ca 1ed738f1cab32230a4472b868cd8dc6e NA Solid Tissue Normal C3L-05423.MethArray.Red.T C3L-05423 LSCC Methylation Array tumor CPT0282910006 204367490066_R06C01_Red.idat 13677900 IDAT Red 3fd3a015-7cca-49e1-bdea-f012fb5448e2 07836d23702cff32e8381d7864e863ee NA Primary Tumor C3L-05423.miRNA-Seq.A C3L-05423 LSCC miRNA-Seq tissue_normal CPT0282940009 200513_UNC31-K00269_0278_BHH7Y7BBXY_GGCTAC_S15_L005_R1_001.unaln.bam 220905639 BAM NA b4c29137-3e9c-480d-ac67-1092063ff911 9fe4dc20310d2a69b8c0ec2a571be166 NA Solid Tissue Normal +C3L-05423.miRNA-Seq.A.hg38 C3L-05423 LSCC miRNA-Seq tissue_normal CPT0282940009 67ecec66-0c7f-4502-a7aa-e741905e25ee_mirnaseq_gdc_realn.bam 243275197 BAM NA 18cba86f-8020-4991-80b1-b17dfa90fe53 08f8a85307775e840b164695859a2aa1 hg38 Solid Tissue Normal C3L-05423.miRNA-Seq.T C3L-05423 LSCC miRNA-Seq tumor CPT0282910009 200224_UNC31-K00269_0267_AHC722BBXY_GTGAAA_S19_L006_R1_001.unaln.bam 262297533 BAM NA 1cc09d1a-848e-4eae-a5e1-65ec251dc813 0f4f5946a00e9c770266c5414b0ea3ed NA Primary Tumor +C3L-05423.miRNA-Seq.T.hg38 C3L-05423 LSCC miRNA-Seq tumor CPT0282910009 24658a12-f698-4ee6-8f5c-234bf16a0d14_mirnaseq_gdc_realn.bam 282307073 BAM NA 6daf2460-533e-4da3-9fed-1d6954b3c4cc e5d11fe5c2d8a55cf1561d78e9166a21 hg38 Primary Tumor C3L-05423.RNA-Seq.R1.A C3L-05423 LSCC RNA-Seq tissue_normal CPT0282940009 200505_UNC32-K00270_0245_AHH5FVBBXY_TCTCTACT-CGCGGTTC_S11_L007_R1_001.fastq.gz 4415304198 FASTQ NA 3b34808d-b27f-4482-a1ff-4d2e87b188b6 772f62b80e958d1798f37bf285b20d70 NA Solid Tissue Normal C3L-05423.RNA-Seq.R1.T C3L-05423 LSCC RNA-Seq tumor CPT0282910009 200428_UNC31-K00269_0275_AHGCJVBBXY_TTCCTGTT-AGTATCTT_S3_L001_R1_001.fastq.gz 4489332453 FASTQ NA d0ac19b2-1a83-4bb5-970f-85d1c79c2624 d20247e8fe1b44f2977f38645238d67d NA Primary Tumor C3L-05423.RNA-Seq.R2.A C3L-05423 LSCC RNA-Seq tissue_normal CPT0282940009 200505_UNC32-K00270_0245_AHH5FVBBXY_TCTCTACT-CGCGGTTC_S11_L007_R2_001.fastq.gz 4774818539 FASTQ NA 81c7c5ab-c5e6-4df6-ae8e-fbefa9d7d1a0 afc7ea02ebf843b5bdea909cd6a89141 NA Solid Tissue Normal C3L-05423.RNA-Seq.R2.T C3L-05423 LSCC RNA-Seq tumor CPT0282910009 200428_UNC31-K00269_0275_AHGCJVBBXY_TTCCTGTT-AGTATCTT_S3_L001_R2_001.fastq.gz 4942844948 FASTQ NA c18b79e3-24ae-4e53-974e-2878757e4e00 16addfd396e311a877bb41b5ceb3ca75 NA Primary Tumor C3L-05423.WGS.N C3L-05423 LSCC WGS blood_normal CPT0283050002 CPT0283050002.WholeGenome.RP-2158.bam 22150583479 BAM NA 8eacf8d6-cb46-4406-b9d5-b5e1cb181811 17e947c7ccaa811c7ad179ce6ba13f7d hg19 Blood Derived Normal +C3L-05423.WGS.N.hg38 C3L-05423 LSCC WGS blood_normal CPT0283050002 473dfbc7-4094-4cb5-9f0e-152bdcc320d3_wgs_gdc_realn.bam 66453981376 BAM NA 2168c0d3-9223-43d5-8288-7580f45353be c0705eee3f92fa5d8689335ba767872e hg38 Blood Derived Normal C3L-05423.WGS.T C3L-05423 LSCC WGS tumor CPT0282910006 CPT0282910006.WholeGenome.RP-2158.bam 24643260116 BAM NA 897e4ec6-9dc6-40eb-90cb-369c300baa76 cf399450618b3cc855f2f47ce117a9eb hg19 Primary Tumor +C3L-05423.WGS.T.hg38 C3L-05423 LSCC WGS tumor CPT0282910006 8f8f8717-6151-4224-99ce-d7b74db7fe3e_wgs_gdc_realn.bam 74516106560 BAM NA 0ea222ee-5ab4-4e63-8bfa-71829ea50d62 1d671acddba64afda2f60482e636f23f hg38 Primary Tumor +C3L-05423.WXS.A C3L-05423 LSCC WXS tissue_normal CPT0282940006 CPT0282940006.WholeExome.RP-1303.bam 30693215316 BAM NA 089c8215-8560-44a0-8b60-894e7a7bf15e 22f3672df89dd9bff6df3c20a54e7e02 hg19 Solid Tissue Normal C3L-05423.WXS.N C3L-05423 LSCC WXS blood_normal CPT0283050002 CPT0283050002.WholeExome.RP-1303.bam 24460226474 BAM NA 99bca1c2-26dd-4f6b-819d-4f74df6f3ae7 df467a62e5a32262850596986bdae55f hg19 Blood Derived Normal C3L-05423.WXS.T C3L-05423 LSCC WXS tumor CPT0282910006 CPT0282910006.WholeExome.RP-1303.bam 20960949642 BAM NA a7ffe73a-d310-4fbc-8dec-eda3c02efa1d 29f235d9e7ed4a4a8fbd1c6658e56238 hg19 Primary Tumor C3L-05427.MethArray.Green.A C3L-05427 LSCC Methylation Array tissue_normal CPT0284190006 204367470127_R08C01_Grn.idat 13677890 IDAT Green c59739c1-6d64-413d-9699-e9fc2c3e1396 49af47e58c45d899f47437ceec16ba92 NA Solid Tissue Normal @@ -14487,13 +14844,17 @@ C3L-05427.MethArray.Green.T C3L-05427 LSCC Methylation Array tumor CPT0284130006 C3L-05427.MethArray.Red.A C3L-05427 LSCC Methylation Array tissue_normal CPT0284190006 204367470127_R08C01_Red.idat 13677890 IDAT Red a6b80daa-77e3-4715-89ec-4ededde4a8e8 8362dafeb9ac056b26f469751ffce46c NA Solid Tissue Normal C3L-05427.MethArray.Red.T C3L-05427 LSCC Methylation Array tumor CPT0284130006 204372030090_R06C01_Red.idat 13677880 IDAT Red e8bc377d-ace0-4427-beea-c1646c1f8c91 2be81390ffb8f42e4c6d81dc10103f3c NA Primary Tumor C3L-05427.miRNA-Seq.A C3L-05427 LSCC miRNA-Seq tissue_normal CPT0284190009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CTTGTA_S11_L005_R1_001.unaln.bam 245084783 BAM NA b8cddc57-1064-405e-94bd-a09276462aa9 b876a4e8bddca377045ae35952cb1f36 NA Solid Tissue Normal +C3L-05427.miRNA-Seq.A.hg38 C3L-05427 LSCC miRNA-Seq tissue_normal CPT0284190009 0269e8d7-0019-49cd-944f-e1bf88b5db0d_mirnaseq_gdc_realn.bam 269402093 BAM NA 1c7b9c8a-c17d-4ba2-98a1-7d89a52159bd cb9144598f1086a9063b2a579af6314e hg38 Solid Tissue Normal C3L-05427.miRNA-Seq.T C3L-05427 LSCC miRNA-Seq tumor CPT0284130009 200224_UNC31-K00269_0267_AHC722BBXY_GTGGCC_S20_L006_R1_001.unaln.bam 249618803 BAM NA a3bd39fa-7b10-4d61-a08f-d2417de4a5a5 6d02efd3363b303b1904456f866e26ee NA Primary Tumor +C3L-05427.miRNA-Seq.T.hg38 C3L-05427 LSCC miRNA-Seq tumor CPT0284130009 b8e972d6-c1a1-4e51-817e-3a7e59f61408_mirnaseq_gdc_realn.bam 272874656 BAM NA d5fff9ef-452e-4c33-bc55-8e5862981b11 ad3c9d6597dcd9a518d8e11c104619ff hg38 Primary Tumor C3L-05427.RNA-Seq.R1.A C3L-05427 LSCC RNA-Seq tissue_normal CPT0284190009 200505_UNC32-K00270_0245_AHH5FVBBXY_CTCTCGTC-TATAACCT_S12_L007_R1_001.fastq.gz 3970850364 FASTQ NA 482b9386-177c-4b58-911b-71dcf0bc091e d5bcb11c75e7805eab47f8b377709f6b NA Solid Tissue Normal C3L-05427.RNA-Seq.R1.T C3L-05427 LSCC RNA-Seq tumor CPT0284130009 200428_UNC31-K00269_0275_AHGCJVBBXY_CCTTCACC-GACGCTCC_S4_L001_R1_001.fastq.gz 3152343958 FASTQ NA 1e71dff6-a4f6-4b2f-997b-97333d743138 13b58788ddeaebf60f6560ff1d214f3b NA Primary Tumor C3L-05427.RNA-Seq.R2.A C3L-05427 LSCC RNA-Seq tissue_normal CPT0284190009 200505_UNC32-K00270_0245_AHH5FVBBXY_CTCTCGTC-TATAACCT_S12_L007_R2_001.fastq.gz 4257470120 FASTQ NA 05e7e5ac-bda1-4b39-9be2-13a7ed728760 35f96b78b2854625d31f132962e503f9 NA Solid Tissue Normal C3L-05427.RNA-Seq.R2.T C3L-05427 LSCC RNA-Seq tumor CPT0284130009 200428_UNC31-K00269_0275_AHGCJVBBXY_CCTTCACC-GACGCTCC_S4_L001_R2_001.fastq.gz 3502760688 FASTQ NA 0985bf86-4c08-4c25-b649-faf95cb52e85 c0652aec66606cc7e4f0f11ef16be5b7 NA Primary Tumor C3L-05427.WGS.N C3L-05427 LSCC WGS blood_normal CPT0284290002 CPT0284290002.WholeGenome.RP-2158.bam 32294248540 BAM NA 74d939ff-9663-4484-ab5d-b95e8af97548 c3847962e4f1417c6a4a014708c54bdb hg19 Blood Derived Normal +C3L-05427.WGS.N.hg38 C3L-05427 LSCC WGS blood_normal CPT0284290002 e5dcd75a-3cd2-41b2-8297-a1fce506b09a_wgs_gdc_realn.bam 96467113094 BAM NA 28017ff1-f4d8-485f-b4fd-a52523420749 ce00db170ed1c9f28e54d8452890e8d0 hg38 Blood Derived Normal C3L-05427.WGS.T C3L-05427 LSCC WGS tumor CPT0284130006 CPT0284130006.WholeGenome.RP-2158.bam 31112324564 BAM NA a56bfc48-fb37-40a3-868d-e1ed0cb7b763 029a7667b029945119db5dd32355017b hg19 Primary Tumor +C3L-05427.WGS.T.hg38 C3L-05427 LSCC WGS tumor CPT0284130006 9a304621-e269-441a-97e1-ada9ebee23ab_wgs_gdc_realn.bam 90804062569 BAM NA 4329ac2a-b1af-4698-9bc5-8cf6776181b4 5833de3b1eb6d7ca6abce2b7ce4c04b9 hg38 Primary Tumor C3L-05427.WXS.A C3L-05427 LSCC WXS tissue_normal CPT0284190006 CPT0284190006.WholeExome.RP-1303.bam 20287751058 BAM NA c2f9d846-ab71-4646-8b1f-75c2383861a7 51730ae31362f3be0f7f9cba32cb1b34 hg19 Solid Tissue Normal C3L-05427.WXS.N C3L-05427 LSCC WXS blood_normal CPT0284290002 CPT0284290002.WholeExome.RP-1303.bam 23338885419 BAM NA 584090ba-e625-49c7-80b1-5dd9e1efc009 658de42e80b3ec61c7e5c67bdf4d142b hg19 Blood Derived Normal C3L-05427.WXS.T C3L-05427 LSCC WXS tumor CPT0284130006 CPT0284130006.WholeExome.RP-1303.bam 24334654519 BAM NA a7d58a6e-31c5-418d-bb3e-f2e58ab7e6b8 1cc632cfc4596f6bb9032d17c20e3df9 hg19 Primary Tumor @@ -14502,19 +14863,26 @@ C3L-05428.MethArray.Green.T C3L-05428 LSCC Methylation Array tumor CPT0291810006 C3L-05428.MethArray.Red.A C3L-05428 LSCC Methylation Array tissue_normal CPT0291840006 204372030013_R08C01_Red.idat 13677895 IDAT Red ec90d70d-9efc-488e-9ead-f67cf77edbb4 ffb48d1d0e85c44e5dc363afe7b1ec9e NA Solid Tissue Normal C3L-05428.MethArray.Red.T C3L-05428 LSCC Methylation Array tumor CPT0291810006 204372030090_R05C01_Red.idat 13677880 IDAT Red 9458439d-314f-4510-8ff9-29361752a5ef d7034f5f394b96eb1e525115cbba6338 NA Primary Tumor C3L-05428.miRNA-Seq.T C3L-05428 LSCC miRNA-Seq tumor CPT0291810009 200325_UNC31-K00269_0272_AHHC2NBBXY_CAACTA_S5_L001_R1_001.unaln.bam 267387157 BAM NA 5c302e2a-c45b-4638-b95a-0c536c939b90 d4ac39d9ba14932e2b10ef1e46abea76 NA Primary Tumor +C3L-05428.miRNA-Seq.T.hg38 C3L-05428 LSCC miRNA-Seq tumor CPT0291810009 84acd2a0-dc88-4125-b5ac-cb038ac723ea_mirnaseq_gdc_realn.bam 298961510 BAM NA 66e2fdad-5f58-4147-84de-3ca1cb8b9cd1 ba6519bb7c3d18680990e610586c2831 hg38 Primary Tumor C3L-05428.RNA-Seq.R1.T C3L-05428 LSCC RNA-Seq tumor CPT0291810009 200428_UNC31-K00269_0275_AHGCJVBBXY_TGCGAGAC-CATTGTTG_S13_L004_R1_001.fastq.gz 3442364882 FASTQ NA 5fabb5b3-0d33-4be8-92c3-d3239d33d978 73e5e1734fd71bce85adf761ac8bd02d NA Primary Tumor C3L-05428.RNA-Seq.R2.T C3L-05428 LSCC RNA-Seq tumor CPT0291810009 200428_UNC31-K00269_0275_AHGCJVBBXY_TGCGAGAC-CATTGTTG_S13_L004_R2_001.fastq.gz 3624151545 FASTQ NA e5c5af32-42c1-4e4f-97f3-4bda6ed36973 4f2e492be320a4598ce0df0585fddff2 NA Primary Tumor C3L-05428.WGS.N C3L-05428 LSCC WGS blood_normal CPT0291940005 CPT0291940005.WholeGenome.RP-2158.bam 26713109649 BAM NA f858d924-8cfd-4b5e-8817-93efe7375be9 49ce2827bce31f04ce3aaf96f27864cc hg19 Blood Derived Normal +C3L-05428.WGS.N.hg38 C3L-05428 LSCC WGS blood_normal CPT0291940005 dce0b2ca-d48b-4e22-9e36-27c8e5e416f5_wgs_gdc_realn.bam 78704546334 BAM NA 8c8aa6d0-c603-40c5-ad5e-96c12012e21e 284ce87e66a06080f97dbd32e0e6773e hg38 Blood Derived Normal C3L-05428.WGS.T C3L-05428 LSCC WGS tumor CPT0291810006 CPT0291810006.WholeGenome.RP-2158.bam 24519926345 BAM NA b3c235ca-3f1c-4789-be85-a9d6cd5ada65 e51265c932893abf3901fffff6a1a925 hg19 Primary Tumor +C3L-05428.WGS.T.hg38 C3L-05428 LSCC WGS tumor CPT0291810006 d15d106b-64ab-4e62-a0f3-dd22920946b7_wgs_gdc_realn.bam 71384825686 BAM NA 30a31e54-8637-431b-ad11-88efc4c79940 2602b01ea3e41a9720b5d3156c349d98 hg38 Primary Tumor +C3L-05428.WXS.A C3L-05428 LSCC WXS tissue_normal CPT0291840006 CPT0291840006.WholeExome.RP-1303.bam 41017629080 BAM NA 085e18c3-0d71-486f-b6d0-28838ac1ec99 5985041855e7cd48cd696d9bcf419b66 hg19 Solid Tissue Normal C3L-05428.WXS.N C3L-05428 LSCC WXS blood_normal CPT0291940005 CPT0291940005.WholeExome.RP-1303.bam 19821060847 BAM NA e54401a7-aa02-4622-b779-42b358b01c34 4a9e14f66bf6119c504958cb4363e27d hg19 Blood Derived Normal C3L-05428.WXS.T C3L-05428 LSCC WXS tumor CPT0291810006 CPT0291810006.WholeExome.RP-1303.bam 23608371967 BAM NA ac1ecbfd-471b-44a9-b30c-ffb502e82c03 1143dca543fa1105e2da62f32c6f87c6 hg19 Primary Tumor C3L-05571.MethArray.Green.T C3L-05571 UCEC Methylation Array tumor CPT0275270009 204372030024_R01C01_Grn.idat 13677905 IDAT Green 94b106fb-b0c9-4e73-917f-f9792591e6ec d6ed0930b2680bf5233e71cd3ebd4d1e NA Primary Tumor C3L-05571.MethArray.Red.T C3L-05571 UCEC Methylation Array tumor CPT0275270009 204372030024_R01C01_Red.idat 13677905 IDAT Red 7ef175a4-38e0-46ab-8634-93b3c4926cbc 3e030b20324cb1f88c2a3750d2421bdb NA Primary Tumor C3L-05571.miRNA-Seq.T C3L-05571 UCEC miRNA-Seq tumor CPT0275270006 200513_UNC31-K00269_0278_BHH7Y7BBXY_GACGAC_S41_L008_R1_001.unaln.bam 252365298 BAM NA 68c3bd9e-8acb-4f9f-976e-f7f1bf8ac0ae 1c23c36fb9b06a8aa42e4c82cf7ed060 NA Primary Tumor +C3L-05571.miRNA-Seq.T.hg38 C3L-05571 UCEC miRNA-Seq tumor CPT0275270006 4d4fc8c8-6fcf-43c1-949c-8efc153cd3cc_mirnaseq_gdc_realn.bam 277898639 BAM NA e3dbc3e5-624a-408e-84fc-7246980d86e6 1d74fae8408096b00aa52e1dec0937cf hg38 Primary Tumor C3L-05571.RNA-Seq.R1.T C3L-05571 UCEC RNA-Seq tumor CPT0275270006 200218_UNC31-K00269_0266_AHGKHKBBXY_GAATGAGA-GAGGCATT_S68_L008_R1_001.fastq.gz 3538685411 FASTQ NA 81f527a8-8a38-474b-a8e7-fd70b107bfc4 e7fa4f00a627383f222ebbaeefae034e NA Primary Tumor C3L-05571.RNA-Seq.R2.T C3L-05571 UCEC RNA-Seq tumor CPT0275270006 200218_UNC31-K00269_0266_AHGKHKBBXY_GAATGAGA-GAGGCATT_S68_L008_R2_001.fastq.gz 3740963385 FASTQ NA 9ee12b8b-d9df-4948-80c5-cc88369fd22f 9cb9a7315c51c7d088f507b8e0c3834a NA Primary Tumor C3L-05571.WGS.N C3L-05571 UCEC WGS blood_normal CPT0273520002 CPT0273520002.WholeGenome.RP-2158.bam 25405372434 BAM NA 76a015af-21d8-4fac-814f-82ab77d46413 c39376f063dae6ab7f3750335eaf1d4a hg19 Blood Derived Normal +C3L-05571.WGS.N.hg38 C3L-05571 UCEC WGS blood_normal CPT0273520002 2154e8df-970e-44cf-a0d9-ee0a6cc3a8f6_wgs_gdc_realn.bam 72991842163 BAM NA 04fe5225-2758-4691-b709-934aa7656050 04eda63fbb1eb1e66d7ed63b3a4a93f0 hg38 Blood Derived Normal C3L-05571.WGS.T C3L-05571 UCEC WGS tumor CPT0275270009 CPT0275270009.WholeGenome.RP-2158.bam 25934538376 BAM NA 55d91490-d181-4c83-a94f-2738bb68cc17 4ec1624d6c4a0e4a51b2df67e7bab03d hg19 Primary Tumor +C3L-05571.WGS.T.hg38 C3L-05571 UCEC WGS tumor CPT0275270009 63c942b4-6dcf-4ed7-8c57-d9216fb8ac87_wgs_gdc_realn.bam 76185528314 BAM NA 0a1d1971-388c-472e-a6ac-c3608817ee7d c25ebbdffc502d7918284784112aaf03 hg38 Primary Tumor C3L-05571.WXS.N C3L-05571 UCEC WXS blood_normal CPT0273520002 CPT0273520002.WholeExome.RP-1303.bam 20950292307 BAM NA 395be3f7-e961-4046-9d16-7fad53804df5 8047280f8c519f485ff98fb746c892d6 hg19 Blood Derived Normal C3L-05571.WXS.T C3L-05571 UCEC WXS tumor CPT0275270009 CPT0275270009.WholeExome.RP-1303.bam 20077678617 BAM NA 8f9927db-71ec-4605-a7e3-fe7f77aa1437 8742ce9e6ec204e90056444fc7a561c9 hg19 Primary Tumor C3L-05693.MethArray.Green.A C3L-05693 LSCC Methylation Array tissue_normal CPT0284550006 204367490030_R08C01_Grn.idat 13677885 IDAT Green 9d3d131f-4256-4ff0-91c0-c4407cbbf318 277fe3cc547cbb5a9591a11dbb7d9685 NA Solid Tissue Normal @@ -14522,32 +14890,42 @@ C3L-05693.MethArray.Green.T C3L-05693 LSCC Methylation Array tumor CPT0284540006 C3L-05693.MethArray.Red.A C3L-05693 LSCC Methylation Array tissue_normal CPT0284550006 204367490030_R08C01_Red.idat 13677885 IDAT Red ac3a8f4b-08a0-49ff-bdcb-06e712ea0447 dd8183f80aceca2d2f620516f6c458df NA Solid Tissue Normal C3L-05693.MethArray.Red.T C3L-05693 LSCC Methylation Array tumor CPT0284540006 204372030139_R06C01_Red.idat 13677880 IDAT Red 1e3e0991-ad53-4f63-aae2-a52f66ca8051 884859ca3fc3a9cd844a9b5f930f5fcc NA Primary Tumor C3L-05693.miRNA-Seq.A C3L-05693 LSCC miRNA-Seq tissue_normal CPT0284550009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CAGATC_S7_L005_R1_001.unaln.bam 256275635 BAM NA 30403d01-d93a-47b5-94a4-c5d8afbc1b11 620650e379e1a07565ae8c67f0ef02eb NA Solid Tissue Normal +C3L-05693.miRNA-Seq.A.hg38 C3L-05693 LSCC miRNA-Seq tissue_normal CPT0284550009 3fa78d4c-98cc-4a62-8c89-7c3ddd1b357c_mirnaseq_gdc_realn.bam 281220743 BAM NA b302bb62-00ef-4705-bcc1-8f51b08efc43 9ab73f5e6d37e6599eb462f5c835b167 hg38 Solid Tissue Normal C3L-05693.miRNA-Seq.T C3L-05693 LSCC miRNA-Seq tumor CPT0284540009 200224_UNC31-K00269_0267_AHC722BBXY_CATGGC_S34_L007_R1_001.unaln.bam 204402100 BAM NA 8e258968-f076-44f4-899f-0578ade428b1 4a5cb6587b60da98e9d3beec350382ec NA Primary Tumor +C3L-05693.miRNA-Seq.T.hg38 C3L-05693 LSCC miRNA-Seq tumor CPT0284540009 98b48f0e-f2aa-43c3-a71e-6ec7f41e6522_mirnaseq_gdc_realn.bam 225150733 BAM NA 0b139a09-16d8-457d-950c-34b4a9c69f20 93bdbfe79e5cb0490ecf963e1a802a26 hg38 Primary Tumor C3L-05693.RNA-Seq.R1.A C3L-05693 LSCC RNA-Seq tissue_normal CPT0284550009 200505_UNC32-K00270_0245_AHH5FVBBXY_CAAGCTAG-ACATAGCG_S7_L006_R1_001.fastq.gz 4007300060 FASTQ NA 41d75bd4-c284-404f-9997-d77ab8824fde ef1e903535526ab7625e66824ebd3e36 NA Solid Tissue Normal C3L-05693.RNA-Seq.R1.T C3L-05693 LSCC RNA-Seq tumor CPT0284540009 200428_UNC32-K00270_0243_AHG3Y3BBXY_CGTTAGAA-TTCAGGTC_S2_L001_R1_001.fastq.gz 5135433715 FASTQ NA 72528177-da54-44e1-9b6d-3461942f09a3 697b17a8253cb873741c675b1b694011 NA Primary Tumor C3L-05693.RNA-Seq.R2.A C3L-05693 LSCC RNA-Seq tissue_normal CPT0284550009 200505_UNC32-K00270_0245_AHH5FVBBXY_CAAGCTAG-ACATAGCG_S7_L006_R2_001.fastq.gz 4306863459 FASTQ NA 7e52534b-ef33-46e8-938e-4141a128b64d f1e048da2b169e544f4c8390176cbe56 NA Solid Tissue Normal C3L-05693.RNA-Seq.R2.T C3L-05693 LSCC RNA-Seq tumor CPT0284540009 200428_UNC32-K00270_0243_AHG3Y3BBXY_CGTTAGAA-TTCAGGTC_S2_L001_R2_001.fastq.gz 5795875630 FASTQ NA fa73de66-06cd-4ffb-8d4e-a8bc87ac14db a4c0f2d1219e914638374725cbf49327 NA Primary Tumor C3L-05693.WGS.N C3L-05693 LSCC WGS blood_normal CPT0285840002 CPT0285840002.WholeGenome.RP-2158.bam 22708174541 BAM NA 28f3e606-589c-40a5-a74d-0e40c054d11c 9e6f59b2332a465e3ec24b74b01d7af8 hg19 Blood Derived Normal +C3L-05693.WGS.N.hg38 C3L-05693 LSCC WGS blood_normal CPT0285840002 75cf68ed-fd4e-4592-b25c-85c9263a2adb_wgs_gdc_realn.bam 66841189471 BAM NA 0fa3b175-51f3-439d-b80a-7cfe8ed0fbb8 1ed33fd0af00da6317b9cb9cb8115540 hg38 Blood Derived Normal C3L-05693.WGS.T C3L-05693 LSCC WGS tumor CPT0284540006 CPT0284540006.WholeGenome.RP-2158.bam 22594747192 BAM NA 37c561fd-6a83-419b-81cd-1832e1a8195e 1bfbc220f37c4e552fa7add212955de8 hg19 Primary Tumor +C3L-05693.WGS.T.hg38 C3L-05693 LSCC WGS tumor CPT0284540006 7fde45f8-250d-45d1-827c-9f5313c7e614_wgs_gdc_realn.bam 63760329856 BAM NA 86f6ff64-28d1-4a9a-a636-7510c36b6fca 787407892ac61cba3b6983facf38a2d4 hg38 Primary Tumor C3L-05693.WXS.A C3L-05693 LSCC WXS tissue_normal CPT0284550006 CPT0284550006.WholeExome.RP-1303.bam 27792646981 BAM NA c0b47db4-4092-40a7-b001-b60b03ab8ea3 ecda53efeb376d52886528304fd8a3e3 hg19 Solid Tissue Normal C3L-05693.WXS.N C3L-05693 LSCC WXS blood_normal CPT0285840002 CPT0285840002.WholeExome.RP-1303.bam 27629240514 BAM NA bc520d29-d5bd-4a67-900a-f4390d2b2a64 3a58e2a2cd700f2eca9115d04ef3f2e3 hg19 Blood Derived Normal C3L-05693.WXS.T C3L-05693 LSCC WXS tumor CPT0284540006 CPT0284540006.WholeExome.RP-1303.bam 20527228697 BAM NA 502c3c14-0dfd-4475-bb7e-e577a1d1fd54 e7e48e2db9f44f133c136524e17cb436 hg19 Primary Tumor C3L-05848.MethArray.Green.T C3L-05848 UCEC Methylation Array tumor CPT0288750009 204372030106_R06C01_Grn.idat 13677885 IDAT Green 0a065a8b-c02c-4b0b-b6a3-4e251a8c4ad4 9558bde51f725c60484b03d5cdb0df62 NA Primary Tumor C3L-05848.MethArray.Red.T C3L-05848 UCEC Methylation Array tumor CPT0288750009 204372030106_R06C01_Red.idat 13677885 IDAT Red b4c3d582-0793-4f9b-9ec4-897dba398e85 03be4c8aed9fac92cb60fb38ecf9d196 NA Primary Tumor C3L-05848.miRNA-Seq.T C3L-05848 UCEC miRNA-Seq tumor CPT0288750006 200513_UNC31-K00269_0278_BHH7Y7BBXY_TAATCG_S42_L008_R1_001.unaln.bam 194402343 BAM NA eb251cc7-d9e3-4755-b1d5-f71ef8dbde73 1affa8e420f5b522ac6a6e461f39cff8 NA Primary Tumor +C3L-05848.miRNA-Seq.T.hg38 C3L-05848 UCEC miRNA-Seq tumor CPT0288750006 ac7e0cd3-76ef-4112-b477-b55de7dfbf35_mirnaseq_gdc_realn.bam 211461102 BAM NA bf128935-81ed-4151-9e03-b97d6b46d5ed 843570f4183035b0cc87774adb9e44bc hg38 Primary Tumor C3L-05848.RNA-Seq.R1.T C3L-05848 UCEC RNA-Seq tumor CPT0288750006 200218_UNC31-K00269_0266_AHGKHKBBXY_TGCGGCGT-CCTCGGTA_S61_L007_R1_001.fastq.gz 4848554227 FASTQ NA a20970a5-0b49-4d46-b295-01241bc3bddf 0828dbbb1aab50ffe8838d8ead7e1ac5 NA Primary Tumor C3L-05848.RNA-Seq.R2.T C3L-05848 UCEC RNA-Seq tumor CPT0288750006 200218_UNC31-K00269_0266_AHGKHKBBXY_TGCGGCGT-CCTCGGTA_S61_L007_R2_001.fastq.gz 5280894738 FASTQ NA a1e74ea4-3a49-425b-9958-e27affeb1742 5069041bffd07e6f5237160e69784be1 NA Primary Tumor C3L-05848.WGS.N C3L-05848 UCEC WGS blood_normal CPT0297030002 CPT0297030002.WholeGenome.RP-2158.bam 22123037304 BAM NA c46afebd-b2b5-4bd2-a465-59767618650c 3e4c03af9aef5dabc6070fd964d2c386 hg19 Blood Derived Normal +C3L-05848.WGS.N.hg38 C3L-05848 UCEC WGS blood_normal CPT0297030002 7d7cb0ec-0300-463a-bf17-b3b5126d3cba_wgs_gdc_realn.bam 64633587295 BAM NA b9d8dbc3-28d5-4a81-99c1-88246d743f56 9ac5302cfb94d79f29658c872cbcfc7f hg38 Blood Derived Normal C3L-05848.WGS.T C3L-05848 UCEC WGS tumor CPT0288750009 CPT0288750009.WholeGenome.RP-2158.bam 25131159601 BAM NA e2914989-c6d8-44cf-8d69-6d01e9e1ad7b c2e022413d75838d5cf0dc479ca86ad7 hg19 Primary Tumor +C3L-05848.WGS.T.hg38 C3L-05848 UCEC WGS tumor CPT0288750009 4371e677-059d-4c39-9ec3-fdbad29b064e_wgs_gdc_realn.bam 76555436982 BAM NA 11884c29-689e-4c70-adfb-9490351d8c07 664807c9efdafffacfcbc743ea87beaa hg38 Primary Tumor C3L-05848.WXS.N C3L-05848 UCEC WXS blood_normal CPT0297030002 CPT0297030002.WholeExome.RP-1303.bam 26000564568 BAM NA 912c08b8-6df4-4890-b53b-5015d80b1ef5 283b3e9fa7ce08fa2ea6e524a3b0a0b0 hg19 Blood Derived Normal C3L-05848.WXS.T C3L-05848 UCEC WXS tumor CPT0288750009 CPT0288750009.WholeExome.RP-1303.bam 18294568345 BAM NA e3d6b78f-b44b-4870-844a-fed430788176 a9b4d65b450a018d258a3c5177a3d1fa hg19 Primary Tumor C3L-05849.MethArray.Green.T C3L-05849 UCEC Methylation Array tumor CPT0288830009 204372030013_R06C01_Grn.idat 13677895 IDAT Green d2d41196-9c85-492e-a2e9-595d316fdd9b 89aeece8ea279672a9d460793738fb93 NA Primary Tumor C3L-05849.MethArray.Red.T C3L-05849 UCEC Methylation Array tumor CPT0288830009 204372030013_R06C01_Red.idat 13677895 IDAT Red 7192561d-dbe3-42f3-86e5-7a2079f29616 e62f8478b6d4cb9f0dce0b4f46f42491 NA Primary Tumor C3L-05849.miRNA-Seq.T C3L-05849 UCEC miRNA-Seq tumor CPT0288830006 200513_UNC31-K00269_0278_BHH7Y7BBXY_TACAGC_S43_L008_R1_001.unaln.bam 257617056 BAM NA 12b38f1a-5c62-444b-a4fe-9275a44fdb56 8eca96a665344db3d776b693485a9a99 NA Primary Tumor +C3L-05849.miRNA-Seq.T.hg38 C3L-05849 UCEC miRNA-Seq tumor CPT0288830006 60d14046-a220-448e-9ae8-76ae2a990969_mirnaseq_gdc_realn.bam 280378364 BAM NA bb8b77d2-9651-4f5e-a987-8e8fc9881125 794e2e8ef51c963582e2ddd5e0551756 hg38 Primary Tumor C3L-05849.RNA-Seq.R1.T C3L-05849 UCEC RNA-Seq tumor CPT0288830006 200218_UNC31-K00269_0266_AHGKHKBBXY_CATAATAC-TTCTAACG_S62_L007_R1_001.fastq.gz 3516758807 FASTQ NA df1c6490-5106-4e02-945a-118b9cef06fb ad456ac0f22fa90061f3a38d3c26ce11 NA Primary Tumor C3L-05849.RNA-Seq.R2.T C3L-05849 UCEC RNA-Seq tumor CPT0288830006 200218_UNC31-K00269_0266_AHGKHKBBXY_CATAATAC-TTCTAACG_S62_L007_R2_001.fastq.gz 3754319312 FASTQ NA 5fc90fb6-c5e7-4c8f-b9b0-1f19f87f64d9 0d37912ac646333a2821ffba59e4dce8 NA Primary Tumor C3L-05849.WGS.N C3L-05849 UCEC WGS blood_normal CPT0297010002 CPT0297010002.WholeGenome.RP-2158.bam 19678690999 BAM NA 38a9d269-957d-4464-8438-72bcdf6f7846 47e36248c26a55d353b8cac4283feb75 hg19 Blood Derived Normal +C3L-05849.WGS.N.hg38 C3L-05849 UCEC WGS blood_normal CPT0297010002 138f530d-492b-4fc7-aba2-be1c9dc10174_wgs_gdc_realn.bam 54235420135 BAM NA 5aa3512e-d383-486a-ac23-d66db53f7388 44958cf06ffb92f5c819829a67b68e2d hg38 Blood Derived Normal C3L-05849.WGS.T C3L-05849 UCEC WGS tumor CPT0288830009 CPT0288830009.WholeGenome.RP-2158.bam 23824195874 BAM NA 195a1036-7fd1-4656-9b77-db40e0e725c8 4f86a0916f55c9bb9c42d0326d48b166 hg19 Primary Tumor +C3L-05849.WGS.T.hg38 C3L-05849 UCEC WGS tumor CPT0288830009 6966a7ce-9a95-4aa0-a41f-0ceb9404607b_wgs_gdc_realn.bam 70891852385 BAM NA d3be3cd8-bc72-4e35-a6dd-1155cf4e9d0e b6e99ff1f7255b44f9ee9f12b60e1dff hg38 Primary Tumor C3L-05849.WXS.N C3L-05849 UCEC WXS blood_normal CPT0297010002 CPT0297010002.WholeExome.RP-1303.bam 20210526266 BAM NA bb7fbe45-592e-461e-b4e9-045c4f51fe35 05903dc2d9b27c8d2d26f399980accfd hg19 Blood Derived Normal C3L-05849.WXS.T C3L-05849 UCEC WXS tumor CPT0288830009 CPT0288830009.WholeExome.RP-1303.bam 16284714004 BAM NA 8bfa03c5-2932-49af-bc0e-aae6bff93d23 3d78bb409b05bfedf6ce7489d1bf3832 hg19 Primary Tumor C3L-06169.MethArray.Green.A C3L-06169 LSCC Methylation Array tissue_normal CPT0294650006 204372030013_R07C01_Grn.idat 13677895 IDAT Green cb284767-1b7b-4954-909a-33cc49801f0f 492be39d2d4d51139311adabee644d3d NA Solid Tissue Normal @@ -14555,13 +14933,17 @@ C3L-06169.MethArray.Green.T C3L-06169 LSCC Methylation Array tumor CPT0294630006 C3L-06169.MethArray.Red.A C3L-06169 LSCC Methylation Array tissue_normal CPT0294650006 204372030013_R07C01_Red.idat 13677895 IDAT Red 3f30c251-ec13-4dd6-9379-959af7b85c02 fb9287134e52dad0fef0b12f9ab4d0f8 NA Solid Tissue Normal C3L-06169.MethArray.Red.T C3L-06169 LSCC Methylation Array tumor CPT0294630006 204367490048_R05C01_Red.idat 13677885 IDAT Red 330515f4-be5f-4a94-9768-3972ad3213b3 cda6607809b3c0f55043b629f4affe46 NA Primary Tumor C3L-06169.miRNA-Seq.A C3L-06169 LSCC miRNA-Seq tissue_normal CPT0294650009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CTAGCT_S38_L006_R1_001.unaln.bam 247746163 BAM NA ea07f382-5934-43be-be73-f016b9d1ba4a 10e159f22043a9e8a129137b3274ed48 NA Solid Tissue Normal +C3L-06169.miRNA-Seq.A.hg38 C3L-06169 LSCC miRNA-Seq tissue_normal CPT0294650009 6f3caa02-68a0-46fa-b092-63e1efa39cfd_mirnaseq_gdc_realn.bam 277006476 BAM NA de7f6291-7086-41c7-b85d-092b04531350 2197ba6ed4b843bf4b9d7ef9bd538558 hg38 Solid Tissue Normal C3L-06169.miRNA-Seq.T C3L-06169 LSCC miRNA-Seq tumor CPT0294630009 200325_UNC31-K00269_0272_AHHC2NBBXY_TATAAT_S20_L001_R1_001.unaln.bam 258167066 BAM NA 41cb2a44-5f2b-4713-839a-538f9fb13edd e911944b48600476ee6ac8c117f70cd4 NA Primary Tumor +C3L-06169.miRNA-Seq.T.hg38 C3L-06169 LSCC miRNA-Seq tumor CPT0294630009 429aefb3-fd55-4ebb-a462-0d4d61286a99_mirnaseq_gdc_realn.bam 279778633 BAM NA c14c93c1-586e-4624-b9c7-b419f6ee6f18 89c5f621a23005ee6a050d8599824f96 hg38 Primary Tumor C3L-06169.RNA-Seq.R1.A C3L-06169 LSCC RNA-Seq tissue_normal CPT0294650009 200505_UNC32-K00270_0246_BHH5F5BBXY_CTACGACA-GAGTCCAA_S22_L006_R1_001.fastq.gz 3521793454 FASTQ NA 36bc82c5-ec55-4d82-8120-70629a8fe622 7a96b35fe2d4d6181893618fea2540cf NA Solid Tissue Normal C3L-06169.RNA-Seq.R1.T C3L-06169 LSCC RNA-Seq tumor CPT0294630009 200428_UNC31-K00269_0275_AHGCJVBBXY_ACGCACCT-GGTGAAGG_S28_L007_R1_001.fastq.gz 3992470249 FASTQ NA 3d44ddb4-1b20-43c1-9b8c-1edf4e3b2df3 c4f33ff0128fac25ccb1455d16f7cbb0 NA Primary Tumor C3L-06169.RNA-Seq.R2.A C3L-06169 LSCC RNA-Seq tissue_normal CPT0294650009 200505_UNC32-K00270_0246_BHH5F5BBXY_CTACGACA-GAGTCCAA_S22_L006_R2_001.fastq.gz 4304341065 FASTQ NA 3daa5c88-e40a-4e3c-83e5-612807b983de 70d28c836ef7ca20d870d8bb1bbe30d2 NA Solid Tissue Normal C3L-06169.RNA-Seq.R2.T C3L-06169 LSCC RNA-Seq tumor CPT0294630009 200428_UNC31-K00269_0275_AHGCJVBBXY_ACGCACCT-GGTGAAGG_S28_L007_R2_001.fastq.gz 4076167287 FASTQ NA 1450f737-61b9-4fae-a7b5-9139ab891db3 c59dc3eb56ba5487b456fade104cb452 NA Primary Tumor C3L-06169.WGS.N C3L-06169 LSCC WGS blood_normal CPT0294750002 CPT0294750002.WholeGenome.RP-2158.bam 23131487388 BAM NA 863ed97c-b507-40cc-9d52-eb9bc80f4dce f3be670ac2308b9ef6dd5c21a43d0f6e hg19 Blood Derived Normal +C3L-06169.WGS.N.hg38 C3L-06169 LSCC WGS blood_normal CPT0294750002 0eba5f38-b9b6-497d-87d8-5e5f04324c28_wgs_gdc_realn.bam 68073812557 BAM NA 535ed714-d6e5-4a74-99b7-ba78acdffa9a ca785a75ad07eacb80af64855f386356 hg38 Blood Derived Normal C3L-06169.WGS.T C3L-06169 LSCC WGS tumor CPT0294630006 CPT0294630006.WholeGenome.RP-2158.bam 26327788819 BAM NA ccc003ce-b21b-405f-8a0e-4939ed785d28 5b7e1769250f6b95090e832ee88fb3c1 hg19 Primary Tumor +C3L-06169.WGS.T.hg38 C3L-06169 LSCC WGS tumor CPT0294630006 4aa15ba7-8f09-406f-9950-0dbaad1751f0_wgs_gdc_realn.bam 75314839042 BAM NA 0fbf693f-0886-4cc8-be10-8bfd6e1bd2e2 08f48bc6da1c953863010b9e7db4df1e hg38 Primary Tumor C3L-06169.WXS.A C3L-06169 LSCC WXS tissue_normal CPT0294650006 CPT0294650006.WholeExome.RP-1303.bam 25779139369 BAM NA 51ed7158-554a-4acf-8d89-c53ba13e68c8 a80b1f296a372dc104710d7ca55f2414 hg19 Solid Tissue Normal C3L-06169.WXS.N C3L-06169 LSCC WXS blood_normal CPT0294750002 CPT0294750002.WholeExome.RP-1303.bam 26819712412 BAM NA aff3cbf9-0477-4954-961c-665c62e261e8 8907f20bc4a907d44e49cb7707ac3097 hg19 Blood Derived Normal C3L-06169.WXS.T C3L-06169 LSCC WXS tumor CPT0294630006 CPT0294630006.WholeExome.RP-1303.bam 19082996953 BAM NA 57f91759-b383-4792-971a-3402dfe2f5c4 71efa1f248b1785073c7aa2f2fea604d hg19 Primary Tumor @@ -14609,6 +14991,8 @@ C3N-00148.WXS.A C3N-00148 CCRCC WXS tissue_normal CPT0081620009 CPT0081620009.Wh C3N-00148.WXS.A.hg38 C3N-00148 CCRCC WXS tissue_normal CPT0081620009 03f3a930-23ac-4022-a180-7eddf513f3a6_wxs_gdc_realn.bam 52704436616 BAM NA 4ab5a44a-7587-489f-98af-b649d5501bdf 9118f3f0250e7453e618b6784d275e91 hg38 Solid Tissue Normal C3N-00148.WXS.N C3N-00148 CCRCC WXS blood_normal CPT0081700002 CPT0081700002.WholeExome.RP-1303.bam 33961808473 BAM NA d6f5f349-2db3-4d20-a6b3-108495eedfd6 040101c3d5583522d9272338a0ccbc63 hg19 Blood Derived Normal C3N-00148.WXS.N.hg38 C3N-00148 CCRCC WXS blood_normal CPT0081700002 925a6f92-a5cd-4b65-8fe4-11ff3c4efd2b_gdc_realn.bam 45883027420 BAM NA 06dcff89-4b72-4e25-ac00-9f8ad4f4a30c 11255bc3d065f34081ce52e3c6edf80e hg38 Blood Derived Normal +C3N-00148.WXS.T C3N-00148 CCRCC WXS tumor CPT0081580009 CPT0081580009.WholeExome.RP-1303.bam 22292381417 BAM NA 0c1e685a-15ac-4e2f-9201-0fe227c1982c 48a555371c45269507a9bf0967284081 hg19 Primary Tumor +C3N-00148.WXS.T C3N-00148 CCRCC WXS tumor CPT0081590009 CPT0081590009.WholeExome.RP-1303.bam 20136824575 BAM NA 987fe07e-a3ec-4fb4-9d93-a5ecc6cb2bc4 b198817b9fcafad57d886accb495581e hg19 Primary Tumor C3N-00148.WXS.T C3N-00148 CCRCC WXS tumor CPT0081600006 CPT0081600006.WholeExome.RP-1303.bam 31418941646 BAM NA 30b16a42-d46d-4732-8aa6-f6b69a3cae21 43f34ceb0be6050937fcd876274c09cb hg19 Primary Tumor C3N-00148.WXS.T C3N-00148 CCRCC WXS tumor CPT0081610009 CPT0081610009.WholeExome.RP-1303.bam 19983518553 BAM NA 89eaab6f-c051-4a36-884e-210ed6c8d634 525610f47e30c22c5b97857492103ce3 hg19 Primary Tumor C3N-00148.WXS.T.hg38 C3N-00148 CCRCC WXS tumor CPT0081600006 127293c3-8feb-4aa1-8f52-1461eeff35ca_gdc_realn.bam 43598251608 BAM NA d32aed5c-6bb2-47ac-aa60-98df1b7e2472 ecc3474437ba7cec7fa07f76c7953f20 hg38 Primary Tumor @@ -14653,6 +15037,7 @@ C3N-00149.WXS.A.hg38 C3N-00149 CCRCC WXS tissue_normal CPT0084590009 c1c83894-a9 C3N-00149.WXS.N C3N-00149 CCRCC WXS blood_normal CPT0085310002 CPT0085310002.WholeExome.RP-1303.bam 21291384780 BAM NA b860d861-9bb1-44bc-bca0-f1ca9822e36e ccdce75db9247dae3f5cbb665f5e0887 hg19 Blood Derived Normal C3N-00149.WXS.N.hg38 C3N-00149 CCRCC WXS blood_normal CPT0085310002 59f6a8d8-d2ee-44ae-8a9d-473c5812c66a_gdc_realn.bam 28851974478 BAM NA 41500ac9-600c-48df-959c-c9b85224b648 b87324d6f9b8991f9bff4b8a78dbd749 hg38 Blood Derived Normal C3N-00149.WXS.T C3N-00149 CCRCC WXS tumor CPT0084560006 CPT0084560006.WholeExome.RP-1303.bam 21710038549 BAM NA 4c623fb5-b769-4544-bf49-f76155fe2d55 d330785e328c0456dbc976b4f1af3c4c hg19 Primary Tumor +C3N-00149.WXS.T C3N-00149 CCRCC WXS tumor CPT0084570009 CPT0084570009.WholeExome.RP-1303.bam 18290571011 BAM NA 9035160e-ba85-49dc-b7cf-fb1761262982 0d0d2b2d1282e63168b5dcbe6accac2b hg19 Primary Tumor C3N-00149.WXS.T C3N-00149 CCRCC WXS tumor CPT0084580009 CPT0084580009.WholeExome.RP-1303.bam 18528240964 BAM NA 2f17ad73-8799-4852-a1fd-7585c06107ac f07be156f9d1862cce1195390e34558b hg19 Primary Tumor C3N-00149.WXS.T.hg38 C3N-00149 CCRCC WXS tumor CPT0084560006 449ffb6b-9f0e-4cc3-8632-720344de67ca_gdc_realn.bam 29971126713 BAM NA 601c9136-7233-4309-b694-ea5eeaa9e2b4 557b33798907fab2dc0014695b37993e hg38 Primary Tumor C3N-00150.MethArray.Green.A C3N-00150 CCRCC Methylation Array tissue_normal CPT0066520009 203027390029_R05C01_Grn.idat 13676246 IDAT Green 8a9a7add-83a3-4366-93ef-fe4c6af83dbf 45743cc909070ab836fb16f8b8f0227c NA Solid Tissue Normal @@ -14703,6 +15088,8 @@ C3N-00150.WXS.N C3N-00150 CCRCC WXS blood_normal CPT0071650002 CPT0071650002.Who C3N-00150.WXS.N.hg38 C3N-00150 CCRCC WXS blood_normal CPT0071650002 3810cfb3-a774-44ea-9122-965669d70781_gdc_realn.bam 34453307020 BAM NA 33187984-635f-4440-b9d6-5798acf8df20 bfe33da82d8e38bbe9f82ef5f9cbf05e hg38 Blood Derived Normal C3N-00150.WXS.T C3N-00150 CCRCC WXS tumor CPT0066480009 CPT0066480009.WholeExome.RP-1303.bam 32818808115 BAM NA 5531adb4-f725-43ea-8dc8-27d7340bb60b bc6ef7c16629ba35835221ae3b088bac hg19 Primary Tumor C3N-00150.WXS.T C3N-00150 CCRCC WXS tumor CPT0066490009 CPT0066490009.WholeExome.RP-1303.bam 17850702976 BAM NA cf86588f-82ed-437d-b52b-f7abb59b3f08 3cfb110076dfe148654aae4c5c9542c7 hg19 Primary Tumor +C3N-00150.WXS.T C3N-00150 CCRCC WXS tumor CPT0066500009 CPT0066500009.WholeExome.RP-1303.bam 18542137804 BAM NA de600cc0-4df1-436d-ad6e-564908d4d1aa e11adbed131377d25e1cedff4a0267c9 hg19 Primary Tumor +C3N-00150.WXS.T C3N-00150 CCRCC WXS tumor CPT0066510008 CPT0066510008.WholeExome.RP-1303.bam 22419000430 BAM NA e7c16a79-ba56-43ca-a710-d496a9c05dd3 cb7297a7f3450c563b22a9cc5155ccb5 hg19 Primary Tumor C3N-00150.WXS.T.hg38 C3N-00150 CCRCC WXS tumor CPT0066480009 ff4668a7-c6a6-42a8-b0a2-87e2ef2e888a_gdc_realn.bam 45301042702 BAM NA b2863f3c-46e2-44e6-9669-702996e320b1 cf00264e536b00a0b2803cd047bdc758 hg38 Primary Tumor C3N-00151.MethArray.Green.T C3N-00151 UCEC Methylation Array tumor CPT0066620006 202178770100_R05C01_Grn.idat 13676233 IDAT Green 631b2ed0-4fea-4ff5-af59-a9795416b0d1 029d3501e375528a7973aa3b806fa7ee NA Primary Tumor C3N-00151.MethArray.Red.T C3N-00151 UCEC Methylation Array tumor CPT0066620006 202178770100_R05C01_Red.idat 13676233 IDAT Red 46327381-ab34-455c-af44-9fc1dfa538ba 48f8672979d0a5862bc8c38c9ef10ba2 NA Primary Tumor @@ -14832,6 +15219,7 @@ C3N-00168.WXS.N.hg38 C3N-00168 CCRCC WXS blood_normal CPT0020920002 9c909c63-b57 C3N-00168.WXS.T C3N-00168 CCRCC WXS tumor CPT0019980009 CPT0019980009.WholeExome.RP-1303.bam 19032385394 BAM NA c85d05f7-dc99-4353-b20c-0372389cc296 633b36b952b55c6db4457bd5231eee00 hg19 Primary Tumor C3N-00168.WXS.T C3N-00168 CCRCC WXS tumor CPT0019990009 CPT0019990009.WholeExome.RP-1303.bam 25929884253 BAM NA 1e507e65-94d0-4e1c-b540-f0a7682161e0 463a51b16500970e8fb9ca701c70c238 hg19 Primary Tumor C3N-00168.WXS.T C3N-00168 CCRCC WXS tumor CPT0020000009 CPT0020000009.WholeExome.RP-1303.bam 22513894422 BAM NA 12431691-c137-44b1-b3a8-3fc96a3cffde 33ea08a3e27eea5261bc7f1d712f1ac0 hg19 Primary Tumor +C3N-00168.WXS.T C3N-00168 CCRCC WXS tumor CPT0020010009 CPT0020010009.WholeExome.RP-1303.bam 18836693322 BAM NA dd64aff9-f432-4253-9eef-4be83975bc7e 447b33ce39c419fe62472f112dcb7cc8 hg19 Primary Tumor C3N-00168.WXS.T.hg38 C3N-00168 CCRCC WXS tumor CPT0019990009 b3eac668-b97c-4ca0-a475-4f3415c8eb65_gdc_realn.bam 35776200041 BAM NA 8c93a797-778d-4b3f-a018-006a6e45d827 3955d9e03946a2107e28f1674e81af37 hg38 Primary Tumor C3N-00169.MethArray.Green.A C3N-00169 LUAD Methylation Array tissue_normal CPT0014930009 203027390034_R03C01_Grn.idat 13676226 IDAT Green 188a30d0-f201-4d53-87c9-5fca0c9babcc 0fe915aae9c96b526a5e894e2d9bd6c3 NA Solid Tissue Normal C3N-00169.MethArray.Green.T C3N-00169 LUAD Methylation Array tumor CPT0014860009 202176300111_R02C01_Grn.idat 13676227 IDAT Green aa51764e-d273-4131-9839-9c83439a9abb bb6d5dd73c4bceb4cada7e8c2f98a0b9 NA Primary Tumor @@ -14959,6 +15347,8 @@ C3N-00177.WXS.A C3N-00177 CCRCC WXS tissue_normal CPT0020130009 CPT0020130009.Wh C3N-00177.WXS.A.hg38 C3N-00177 CCRCC WXS tissue_normal CPT0020130009 8d2a8ba1-6e6a-427c-b391-174086a6b893_wxs_gdc_realn.bam 31924485035 BAM NA a7e3808f-ec24-4b3c-8abd-232614362c1d ee7744280ee5ce6a58ca3149e0373d29 hg38 Solid Tissue Normal C3N-00177.WXS.N C3N-00177 CCRCC WXS blood_normal CPT0020940002 CPT0020940002.WholeExome.RP-1303.bam 23799686430 BAM NA 9ce5eae4-8a70-4c8c-ac8f-b4aa6d236980 cc432cbc23bc272dfff513d010587ff1 hg19 Blood Derived Normal C3N-00177.WXS.N.hg38 C3N-00177 CCRCC WXS blood_normal CPT0020940002 6cff16d4-b72c-4bb6-90ef-6c53ca2b7d65_gdc_realn.bam 32589913441 BAM NA eadf6adc-c1f6-4e35-95d4-586f0a56c328 32d4535ea82e941e4c81a2016a099bdb hg38 Blood Derived Normal +C3N-00177.WXS.T C3N-00177 CCRCC WXS tumor CPT0020100009 CPT0020100009.WholeExome.RP-1303.bam 23339788892 BAM NA aae33b25-9b1c-4cb6-bb84-355ac6d327dd d041a5ebae8c8dbeeb70f54d07bd74ff hg19 Primary Tumor +C3N-00177.WXS.T C3N-00177 CCRCC WXS tumor CPT0020110009 CPT0020110009.WholeExome.RP-1303.bam 42726526811 BAM NA 42cecb4e-94d3-42ad-bf0e-7842d5613584 b6a76b6c0c35fa4e9dfbeae63d4466a4 hg19 Primary Tumor C3N-00177.WXS.T C3N-00177 CCRCC WXS tumor CPT0020120009 CPT0020120009.WholeExome.RP-1303.bam 20655332266 BAM NA a8445ab3-a412-4a7e-890f-2ff902695614 7482cf8a9ac1faa31f477c1b829c91d4 hg19 Primary Tumor C3N-00177.WXS.T.hg38 C3N-00177 CCRCC WXS tumor CPT0020120009 e4eff64c-93e3-4395-840d-7e7ce9ea9a2e_gdc_realn.bam 28061605475 BAM NA 323a01c8-765c-46d4-af30-cd27c56b529b 101b4c16f5b988a7e307fcd434f02bf8 hg38 Primary Tumor C3N-00179.MethArray.Green.T C3N-00179 CM Methylation Array tumor CPT0019940009 202178770100_R06C01_Grn.idat 13676235 IDAT Green fb8958aa-8382-49b9-a936-01bfb417ac86 65adf800f44d7f06ff4835a66285e045 NA Primary Tumor @@ -15289,14 +15679,19 @@ C3N-00223.WXS.T.hg38 C3N-00223 LUAD WXS tumor CPT0111300009 c21b39c5-2ee8-4071-8 C3N-00229.MethArray.Green.T C3N-00229 LSCC Methylation Array tumor CPT0265030011 204372030161_R05C01_Grn.idat 13677880 IDAT Green 8e37c14c-7a5a-4694-95c8-d6872fca6c67 91d470fd94e6c5bf8dd9cd8fc6fef1c0 NA Primary Tumor C3N-00229.MethArray.Red.T C3N-00229 LSCC Methylation Array tumor CPT0265030011 204372030161_R05C01_Red.idat 13677880 IDAT Red 241c90ac-8993-42f8-a3f0-dbd231065218 7392a94f2aa6666fc739022ab433257b NA Primary Tumor C3N-00229.miRNA-Seq.A C3N-00229 LSCC miRNA-Seq tissue_normal CPT0265050006 200513_UNC31-K00269_0278_BHH7Y7BBXY_CAGATC_S7_L007_R1_001.unaln.bam 259346668 BAM NA 6d2f72d2-4a8f-446d-8b37-678ae3a1d5d1 7fdd61dd67ddd1fc99875f683cac0685 NA Solid Tissue Normal +C3N-00229.miRNA-Seq.A.hg38 C3N-00229 LSCC miRNA-Seq tissue_normal CPT0265050006 b67e6b05-dfc7-4bc2-b25f-68e7209ce895_mirnaseq_gdc_realn.bam 293326928 BAM NA b028a022-7c8c-4d72-b51f-c12de341cd50 679d0ba4d70878e55f1336cbebd9eb5d hg38 Solid Tissue Normal C3N-00229.miRNA-Seq.T C3N-00229 LSCC miRNA-Seq tumor CPT0265030014 200224_UNC31-K00269_0267_AHC722BBXY_CAGATC_S7_L006_R1_001.unaln.bam 228953679 BAM NA 80a1bf47-0ae4-42b2-ba81-3ed0c0aeabb5 70abf93e7cb8eccd7f0f3b8e5dbdc00b NA Primary Tumor +C3N-00229.miRNA-Seq.T.hg38 C3N-00229 LSCC miRNA-Seq tumor CPT0265030014 fd36351b-3c82-4790-be02-c5484c91023f_mirnaseq_gdc_realn.bam 253984696 BAM NA 0f394c15-6f22-4742-8df8-65bd92fe6109 ffa2d63c4443884e12efe8aa5d12fa32 hg38 Primary Tumor C3N-00229.RNA-Seq.R1.A C3N-00229 LSCC RNA-Seq tissue_normal CPT0265050006 200505_UNC31-K00269_0277_AHGFKNBBXY_AGGCAGAG-AGAATGCC_S5_L002_R1_001.fastq.gz 3143893620 FASTQ NA 8eecdbc0-da13-49cc-a077-e2156c6345b9 2fefe50689b1dc213a21f809a01baec3 NA Solid Tissue Normal C3N-00229.RNA-Seq.R1.T C3N-00229 LSCC RNA-Seq tumor CPT0265030014 200428_UNC32-K00270_0243_AHG3Y3BBXY_AGGCAGAG-AGAATGCC_S23_L006_R1_001.fastq.gz 3474700033 FASTQ NA 91099a98-a5b3-4b2f-8098-d7355358e842 c115ef2c4dee20505df5f3bb54d25b85 NA Primary Tumor C3N-00229.RNA-Seq.R2.A C3N-00229 LSCC RNA-Seq tissue_normal CPT0265050006 200505_UNC31-K00269_0277_AHGFKNBBXY_AGGCAGAG-AGAATGCC_S5_L002_R2_001.fastq.gz 3560014410 FASTQ NA 8e84d510-4d25-470e-ac2b-3f852ec50a8b 94a133f50f254943af6e75b7f70dd610 NA Solid Tissue Normal C3N-00229.RNA-Seq.R2.T C3N-00229 LSCC RNA-Seq tumor CPT0265030014 200428_UNC32-K00270_0243_AHG3Y3BBXY_AGGCAGAG-AGAATGCC_S23_L006_R2_001.fastq.gz 3667028811 FASTQ NA 821addd9-374c-45f2-ac22-5e9d70d73183 5b7ff3b9f7d833181f7a0a54bddec434 NA Primary Tumor C3N-00229.WGS.N C3N-00229 LSCC WGS blood_normal CPT0264000002 CPT0264000002.WholeGenome.RP-2158.bam 21559294645 BAM NA df5c6b48-3839-4e83-aaf2-66228c4fade8 610f6ce9d95246865e9fcde02c7f3004 hg19 Blood Derived Normal +C3N-00229.WGS.N.hg38 C3N-00229 LSCC WGS blood_normal CPT0264000002 985912ac-ab9b-4695-9325-45f735634db5_wgs_gdc_realn.bam 63957077050 BAM NA a5240ef5-a117-493a-90b1-be4f9d0de625 3617d0c5d742fbfe21e5054a7fd9e75d hg38 Blood Derived Normal C3N-00229.WGS.T C3N-00229 LSCC WGS tumor CPT0265030011 CPT0265030011.WholeGenome.RP-2158.bam 24630818287 BAM NA a478952a-3305-4f8c-8ef0-c733eb86cbdf 074ae3a323eb1cc6873297eaf95f3e3c hg19 Primary Tumor +C3N-00229.WGS.T.hg38 C3N-00229 LSCC WGS tumor CPT0265030011 95c72196-e6f7-4709-a625-91fc6212cadd_wgs_gdc_realn.bam 71011595844 BAM NA cd067844-4016-4ae5-adeb-2e2d3f1a0f06 e2f788379ec190bf5fad1fd32420db5c hg38 Primary Tumor C3N-00229.WXS.N C3N-00229 LSCC WXS blood_normal CPT0264000002 CPT0264000002.WholeExome.RP-1303.bam 24319809375 BAM NA b2836abb-affe-4172-8385-db77f010da82 3367f1d4d8f8052b60a9c3157527c2c9 hg19 Blood Derived Normal +C3N-00229.WXS.T C3N-00229 LSCC WXS tumor CPT0265030011 CPT0265030011.WholeExome.RP-1303.bam 37540971525 BAM NA ae5d5cdb-046c-43b2-bae9-8aa3dafecb4d f233c2f8eb748a031d29a1202ef090e4 hg19 Primary Tumor C3N-00242.MethArray.Green.A C3N-00242 CCRCC Methylation Array tissue_normal CPT0014470009 203027390029_R02C01_Grn.idat 13676246 IDAT Green adab0f0b-636e-49a2-a76b-f6def73b9128 eae284e193f0103860ca920ebedf9ade NA Solid Tissue Normal C3N-00242.MethArray.Green.T C3N-00242 CCRCC Methylation Array tumor CPT0014450007 202163550115_R01C01_Grn.idat 13676231 IDAT Green b1f06d0f-f646-4ec9-89c0-02b8685a83e1 d2fea7fe8ecf9bd42ae3bb782a2ff615 NA Primary Tumor C3N-00242.MethArray.Red.A C3N-00242 CCRCC Methylation Array tissue_normal CPT0014470009 203027390029_R02C01_Red.idat 13676246 IDAT Red 673df5c2-c27c-4381-947f-7a657461d5da ea17fcc10dc2afc9a3fc836440fa05fc NA Solid Tissue Normal @@ -15703,6 +16098,8 @@ C3N-00310.WXS.A C3N-00310 CCRCC WXS tissue_normal CPT0009020009 CPT0009020009.Wh C3N-00310.WXS.A.hg38 C3N-00310 CCRCC WXS tissue_normal CPT0009020009 ebba4dd0-7cf4-4b4f-9886-bb48ade6b588_wxs_gdc_realn.bam 47741770301 BAM NA acc3d8e4-8a01-42ed-b06a-8e76cff2eb7d 731dccde2f410a5a85989f230451309b hg38 Solid Tissue Normal C3N-00310.WXS.N C3N-00310 CCRCC WXS blood_normal CPT0009030002 CPT0009030002.WholeExome.RP-1303.bam 25162838991 BAM NA 3adc0ffd-0717-4d60-81ec-978bcab16d87 c92f8e18a4f98e19f9e3caac5174eecb hg19 Blood Derived Normal C3N-00310.WXS.N.hg38 C3N-00310 CCRCC WXS blood_normal CPT0009030002 46d15fa0-e832-47c8-a5ba-a1caca39b8ad_gdc_realn.bam 34014493164 BAM NA 3c0d4139-3d67-4100-b190-ac5c97bc946a ac9cf2063ec66e20a51ccea6ad6601a6 hg38 Blood Derived Normal +C3N-00310.WXS.T C3N-00310 CCRCC WXS tumor CPT0008980009 CPT0008980009.WholeExome.RP-1303.bam 20178068681 BAM NA 193b2802-bcf0-4b48-a2ff-c39a06607d0c 47c2a51cda77d3306cf6943e293a0160 hg19 Primary Tumor +C3N-00310.WXS.T C3N-00310 CCRCC WXS tumor CPT0008990009 CPT0008990009.WholeExome.RP-1303.bam 22017554490 BAM NA 9278a2a8-1275-4b33-b04a-201bc7c1798a cbd083fa5feb673ae9351f050ab90140 hg19 Primary Tumor C3N-00310.WXS.T C3N-00310 CCRCC WXS tumor CPT0009000006 CPT0009000006.WholeExome.RP-1303.bam 30451564623 BAM NA fc577c64-b332-4a29-ad71-6b1277ca3597 a2bc6892d4b4d062d6723b14ad44057e hg19 Primary Tumor C3N-00310.WXS.T C3N-00310 CCRCC WXS tumor CPT0009010009 CPT0009010009.WholeExome.RP-1303.bam 16694133166 BAM NA 1e14c658-b4c2-4350-9eda-510de7317568 974cfe2a48f00ce9a70d2150cc971364 hg19 Primary Tumor C3N-00310.WXS.T.hg38 C3N-00310 CCRCC WXS tumor CPT0009000006 7f7054b1-e9ef-4275-af89-9926f65014f8_gdc_realn.bam 41036873499 BAM NA 331e5643-c098-412e-9f29-0ed4671fec5a 91c530ff89e75c518a36de684f284600 hg38 Primary Tumor @@ -15744,6 +16141,7 @@ C3N-00312.WXS.A.hg38 C3N-00312 CCRCC WXS tissue_normal CPT0009080009 c2ccc81a-f9 C3N-00312.WXS.N C3N-00312 CCRCC WXS blood_normal CPT0009090002 CPT0009090002.WholeExome.RP-1303.bam 25351330957 BAM NA 560922b1-d466-414d-86b5-e0676e0f7fe7 4d8742e4f3054cf53764129c69f41371 hg19 Blood Derived Normal C3N-00312.WXS.N.hg38 C3N-00312 CCRCC WXS blood_normal CPT0009090002 b502fe65-a50d-45c9-9c87-c57c81394f30_gdc_realn.bam 34531912142 BAM NA aeeaa154-4a21-4e54-b88a-e6e9117aaf99 cf292d35b5648b91d358608041feb0ca hg38 Blood Derived Normal C3N-00312.WXS.T C3N-00312 CCRCC WXS tumor CPT0009040009 CPT0009040009.WholeExome.RP-1303.bam 17837253418 BAM NA 3436fb1f-fb2e-4330-8d77-2c3bf5c12e31 d4a74ac71dab0b98c81381a9450e728e hg19 Primary Tumor +C3N-00312.WXS.T C3N-00312 CCRCC WXS tumor CPT0009050009 CPT0009050009.WholeExome.RP-1303.bam 20117508241 BAM NA 3cad3f2c-e19b-4dd8-b6b1-84e39dc24362 486b965ea5b30ad1639b8ed8ec4b3da8 hg19 Primary Tumor C3N-00312.WXS.T C3N-00312 CCRCC WXS tumor CPT0009060006 CPT0009060006.WholeExome.RP-1303.bam 19543443251 BAM NA e4c75fc4-8601-40ff-ae2c-823306e7e334 fe435adc6659a26f06643c2a26937227 hg19 Primary Tumor C3N-00312.WXS.T C3N-00312 CCRCC WXS tumor CPT0009070009 CPT0009070009.WholeExome.RP-1303.bam 26896315528 BAM NA 113736a3-5f5c-4928-912d-ef13aba2933e 58afffe17ddc76d09d192cb611c3c04d hg19 Primary Tumor C3N-00312.WXS.T.hg38 C3N-00312 CCRCC WXS tumor CPT0009060006 74487670-deb3-44f1-aaa3-d8a7b82d7290_gdc_realn.bam 26465918875 BAM NA ea179973-3472-4360-9eb1-e59eae58ffd3 f39784879bc03571c4781739bd012ccf hg38 Primary Tumor @@ -15806,6 +16204,8 @@ C3N-00314.WXS.A C3N-00314 CCRCC WXS tissue_normal CPT0012090009 CPT0012090009.Wh C3N-00314.WXS.A.hg38 C3N-00314 CCRCC WXS tissue_normal CPT0012090009 5a265e02-4edf-4eb8-aaac-1899ecd02c1a_wxs_gdc_realn.bam 47317251033 BAM NA 4cc44a73-fda5-4103-83a5-e2c11c6fe72f f92423ff2757e342b05c8c3a1b412ee8 hg38 Solid Tissue Normal C3N-00314.WXS.N C3N-00314 CCRCC WXS blood_normal CPT0012150002 CPT0012150002.WholeExome.RP-1303.bam 29318133654 BAM NA a9f7f138-49fd-4012-86c3-91fe2d963c04 ac1ef1a758c9fcf400acfda196068889 hg19 Blood Derived Normal C3N-00314.WXS.N.hg38 C3N-00314 CCRCC WXS blood_normal CPT0012150002 21e53bba-f1a1-42c0-b026-cc40f5bb2b01_gdc_realn.bam 40420145067 BAM NA 15cff317-7193-49d0-ba9f-cd4e363c564f 4f9429318cd3d4ae67a8a7d77069fdf3 hg38 Blood Derived Normal +C3N-00314.WXS.T C3N-00314 CCRCC WXS tumor CPT0012050009 CPT0012050009.WholeExome.RP-1303.bam 45924930918 BAM NA bb6f1faf-ecc8-464d-8ca7-0e1d55aad8dd ee942c140f615b32decfcd23d6820164 hg19 Primary Tumor +C3N-00314.WXS.T C3N-00314 CCRCC WXS tumor CPT0012060012 CPT0012060012.WholeExome.RP-1303.bam 19612326488 BAM NA d7455846-ff2c-4a9e-9a1e-2fd4a57fa4f1 e336758aa2202151bd61fa53981a1d52 hg19 Primary Tumor C3N-00314.WXS.T C3N-00314 CCRCC WXS tumor CPT0012070011 CPT0012070011.WholeExome.RP-1303.bam 24857399548 BAM NA 7c95044c-e391-48db-bdd2-b62452f4663c b593d6fb5ffeda83a820ad87c5f477a1 hg19 Primary Tumor C3N-00314.WXS.T C3N-00314 CCRCC WXS tumor CPT0012080009 CPT0012080009.WholeExome.RP-1303.bam 22943919203 BAM NA 3370a5d5-cde6-4a17-aa4f-022ce4a2ba95 5d9244e22d1d003a0bed11646e931d96 hg19 Primary Tumor C3N-00314.WXS.T.hg38 C3N-00314 CCRCC WXS tumor CPT0012080009 8bfede7e-2578-413c-bea6-447f26b9081d_gdc_realn.bam 31511944675 BAM NA ef10ada7-bbcd-4238-be14-931764592a11 4a269391251d265c68bb212ccc06f89b hg38 Primary Tumor @@ -15851,6 +16251,7 @@ C3N-00317.WXS.A C3N-00317 CCRCC WXS tissue_normal CPT0012290009 CPT0012290009.Wh C3N-00317.WXS.A.hg38 C3N-00317 CCRCC WXS tissue_normal CPT0012290009 67b95338-b369-4e42-9b0f-ac7d5cae97fc_wxs_gdc_realn.bam 48717442545 BAM NA d56540c0-1df0-40a2-9314-d10e677192fc da507d9f404cfadfcf67075536da4b18 hg38 Solid Tissue Normal C3N-00317.WXS.N C3N-00317 CCRCC WXS blood_normal CPT0012350002 CPT0012350002.WholeExome.RP-1303.bam 23314273978 BAM NA 7ce73731-31fd-43e0-8334-e3fe959ddc77 7b2108c4b2253f818caee0a7a4c97323 hg19 Blood Derived Normal C3N-00317.WXS.N.hg38 C3N-00317 CCRCC WXS blood_normal CPT0012350002 9fb1577a-959f-46aa-be5d-f09257637647_gdc_realn.bam 32022229435 BAM NA 6628688a-fa7f-4977-835c-b8eb6007c760 039eb5be43d1ba4839853d85e5e6edf3 hg38 Blood Derived Normal +C3N-00317.WXS.T C3N-00317 CCRCC WXS tumor CPT0012260012 CPT0012260012.WholeExome.RP-1303.bam 21414609107 BAM NA 382f5908-1d87-492e-b46b-26f7487543e1 00047d30d7c6aa7c60c915d031012d4c hg19 Primary Tumor C3N-00317.WXS.T C3N-00317 CCRCC WXS tumor CPT0012280009 CPT0012280009.WholeExome.RP-1303.bam 28280433884 BAM NA 8b89c2fa-2f6a-44df-8e31-e745987d7475 fca542827272bbd6675be5e7581fedb6 hg19 Primary Tumor C3N-00317.WXS.T.hg38 C3N-00317 CCRCC WXS tumor CPT0012280009 0984ed95-1b7c-4757-9a97-4333c5c229e5_gdc_realn.bam 38506250909 BAM NA 376a79e0-5220-485d-bedd-5f0e79a3da32 f1d4683afff0c8c5c745323b6c80f6b4 hg38 Primary Tumor C3N-00320.MethArray.Green.T C3N-00320 CCRCC Methylation Array tumor CPT0012360009 204367400148_R04C01_Grn.idat 13677880 IDAT Green ad8ae0db-4798-4334-9196-bc864a27edac 186f8088fbd343a67a4f1299b7dbfd61 NA Primary Tumor @@ -15890,7 +16291,9 @@ C3N-00320.WXS.A C3N-00320 CCRCC WXS tissue_normal CPT0013790009 CPT0013790009.Wh C3N-00320.WXS.A.hg38 C3N-00320 CCRCC WXS tissue_normal CPT0013790009 4f532e9c-941f-4b49-8dbd-91d63703c946_wxs_gdc_realn.bam 65456776510 BAM NA 41c25043-9857-4a20-87d2-9e000061eb84 05c4edf888d77395ee89ab2d50995adc hg38 Solid Tissue Normal C3N-00320.WXS.N C3N-00320 CCRCC WXS blood_normal CPT0012530002 CPT0012530002.WholeExome.RP-1303.bam 24651820755 BAM NA 891dc65a-cf3a-4197-9b25-cfa67b957038 57ee0259d35ba4c76d0ae1426adf8ab7 hg19 Blood Derived Normal C3N-00320.WXS.N.hg38 C3N-00320 CCRCC WXS blood_normal CPT0012530002 c757ba45-b388-46bf-8eca-6984ac78b872_gdc_realn.bam 33801293421 BAM NA 3b9a2ebc-2dc9-45f5-b4e1-b67572db5204 b8e823b83a741fd0383b61bc7e8ddad6 hg38 Blood Derived Normal +C3N-00320.WXS.T C3N-00320 CCRCC WXS tumor CPT0012360009 CPT0012360009.WholeExome.RP-1303.bam 21949719188 BAM NA e4b1b670-7d8b-4743-b2de-623a9ce087aa c80ce3d3559b5331b8df5468e1160d26 hg19 Primary Tumor C3N-00320.WXS.T C3N-00320 CCRCC WXS tumor CPT0012370009 CPT0012370009.WholeExome.RP-1303.bam 25362461894 BAM NA 2967f875-3cfe-4ec8-8e34-60a4f854730d a5d8d03156890cf9ab018f028a7a3d67 hg19 Primary Tumor +C3N-00320.WXS.T C3N-00320 CCRCC WXS tumor CPT0012380009 CPT0012380009.WholeExome.RP-1303.bam 23791812935 BAM NA 340f4483-55cc-4740-aa5e-7e6eff9d7d8c 916957a52a365149533b7a60dbffe5a1 hg19 Primary Tumor C3N-00320.WXS.T C3N-00320 CCRCC WXS tumor CPT0012390009 CPT0012390009.WholeExome.RP-1303.bam 17790709051 BAM NA 1e65d664-5aae-437a-bb07-54ad717627a1 73596a1e45ba7152a155d2ad4ffa1d7a hg19 Primary Tumor C3N-00320.WXS.T.hg38 C3N-00320 CCRCC WXS tumor CPT0012370009 c79489e1-b42b-4426-99c1-a6008778a63c_gdc_realn.bam 34389676597 BAM NA cf7fd859-abdd-4959-938b-2651f551b46b 9b6184e7ae76b5229b93a9d79648691f hg38 Primary Tumor C3N-00321.MethArray.Green.T C3N-00321 UCEC Methylation Array tumor CPT0010260006 202163530118_R02C01_Grn.idat 13676246 IDAT Green bab47cf6-33a4-4d61-9399-5e5eb96a36c8 8489e85604494e68fe136cd54cc342e7 NA Primary Tumor @@ -16340,7 +16743,10 @@ C3N-00390.WXS.A C3N-00390 CCRCC WXS tissue_normal CPT0017450009 CPT0017450009.Wh C3N-00390.WXS.A.hg38 C3N-00390 CCRCC WXS tissue_normal CPT0017450009 450fa79b-024b-41aa-a4ef-1a34855a5487_wxs_gdc_realn.bam 61626170655 BAM NA 00ab82e5-c699-4434-9920-740f58ac3cf6 0e531112c1a5e798e192efaaac8cc50c hg38 Solid Tissue Normal C3N-00390.WXS.N C3N-00390 CCRCC WXS blood_normal CPT0017650002 CPT0017650002.WholeExome.RP-1303.bam 28542007894 BAM NA ca635872-6db3-4d17-9699-daf3fa6557b8 9fd71c47d1344a551bc5ab6c29fd9d13 hg19 Blood Derived Normal C3N-00390.WXS.N.hg38 C3N-00390 CCRCC WXS blood_normal CPT0017650002 faa668ee-186c-4f91-9d95-174aa0475acc_gdc_realn.bam 38648200944 BAM NA 8e18e440-e6bb-4977-89d5-a9dbc941a364 b6c9b9366f24171a1a146ab96b053a74 hg38 Blood Derived Normal +C3N-00390.WXS.T C3N-00390 CCRCC WXS tumor CPT0017380012 CPT0017380012.WholeExome.RP-1303.bam 24192277110 BAM NA 41da4198-c1f7-4caf-a591-8116b66b20de 7c60f31ea4e19ac93aa6e94422799a58 hg19 Primary Tumor C3N-00390.WXS.T C3N-00390 CCRCC WXS tumor CPT0017410009 CPT0017410009.WholeExome.RP-1303.bam 24833283583 BAM NA 91ee293c-9fef-430d-ba72-6887518c1d8d 23ccff72cf782094c15043bc53d7456a hg19 Primary Tumor +C3N-00390.WXS.T C3N-00390 CCRCC WXS tumor CPT0017420012 CPT0017420012.WholeExome.RP-1303.bam 24249113360 BAM NA d6755e36-61c8-4fbc-999b-1135810dd2aa 88f3825c79b5987589a1d61626208757 hg19 Primary Tumor +C3N-00390.WXS.T C3N-00390 CCRCC WXS tumor CPT0017440012 CPT0017440012.WholeExome.RP-1303.bam 19757924839 BAM NA b4b15c62-49ce-484f-98fe-c88cdda5a307 75b493393227757de6b780669dbfb0e3 hg19 Primary Tumor C3N-00390.WXS.T.hg38 C3N-00390 CCRCC WXS tumor CPT0017410009 123b51a7-1551-4ff7-99d0-6feb628c4355_gdc_realn.bam 33875116875 BAM NA 8fb76fd8-4ac2-445a-bf61-627855d3a69c c62623a4244e100151e27920575275fa hg38 Primary Tumor C3N-00432.MethArray.Green.T C3N-00432 CM Methylation Array tumor CPT0022090009 202163550115_R06C01_Grn.idat 13676232 IDAT Green 53e9b37c-de57-4b8a-8f1d-fe7ff8b43fa5 0d76b7bd8f16050810cb4bda5bd88b20 NA Primary Tumor C3N-00432.MethArray.Red.T C3N-00432 CM Methylation Array tumor CPT0022090009 202163550115_R06C01_Red.idat 13676232 IDAT Red b8a35b44-496f-435f-a996-7dd771881c0f 80c105e9b34547eafc822f8b1e86add4 NA Primary Tumor @@ -16512,7 +16918,9 @@ C3N-00437.WXS.A C3N-00437 CCRCC WXS tissue_normal CPT0012570009 CPT0012570009.Wh C3N-00437.WXS.A.hg38 C3N-00437 CCRCC WXS tissue_normal CPT0012570009 044f57af-6c7b-4e34-8820-cbba46ebfb0c_wxs_gdc_realn.bam 41646061538 BAM NA ab787fb6-f198-4e20-9b9f-42779c805bb5 c065b56993c1a91e43fa5e9ac1c6f3a2 hg38 Solid Tissue Normal C3N-00437.WXS.N C3N-00437 CCRCC WXS blood_normal CPT0012620002 CPT0012620002.WholeExome.RP-1303.bam 24033926439 BAM NA e7e7db1b-6107-4cfb-a503-5603e2973c2f 1c9127489a622c2a748b7c58ed8b2656 hg19 Blood Derived Normal C3N-00437.WXS.N.hg38 C3N-00437 CCRCC WXS blood_normal CPT0012620002 8f1d580e-0c91-4789-bdff-2e27ae821366_gdc_realn.bam 32989308648 BAM NA b67db00d-1f85-4283-9a26-b629f2cc3726 d4fde10b2c0bd51e9c7de9b1fbd39b73 hg38 Blood Derived Normal +C3N-00437.WXS.T C3N-00437 CCRCC WXS tumor CPT0012540006 CPT0012540006.WholeExome.RP-1303.bam 20687437390 BAM NA 98f5b847-70ea-42d8-bbd5-be8ab0de8a42 c45665bcff021cb694381d9ef55e7045 hg19 Primary Tumor C3N-00437.WXS.T C3N-00437 CCRCC WXS tumor CPT0012550008 CPT0012550008.WholeExome.RP-1303.bam 29801346626 BAM NA 3d7b8a74-c30c-416c-b03c-db5bb052947a 1ce2b1f331bfc309bcde844dc9841924 hg19 Primary Tumor +C3N-00437.WXS.T C3N-00437 CCRCC WXS tumor CPT0012560010 CPT0012560010.WholeExome.RP-1303.bam 22521243014 BAM NA da734df4-1707-44ec-b7cb-8798b6bf5816 7c29062349df4db9717e03e4d2a2e84d hg19 Primary Tumor C3N-00437.WXS.T.hg38 C3N-00437 CCRCC WXS tumor CPT0012550008 f17d580b-fab7-45ed-90cf-2ad70cf8cd3f_gdc_realn.bam 40762163012 BAM NA 96724a7e-9a99-4ad2-b1da-1d2d28200609 d69d52c517a8e647817d2b6dcc9ec156 hg38 Primary Tumor C3N-00466.MethArray.Green.Tpb C3N-00466 AML Methylation Array tumor_peripheral_blood CPT0023040001 202163550007_R08C01_Grn.idat 13676226 IDAT Green 09a50e23-bcc0-44d9-9e0d-d2afd4d79579 6fc362d9e30485c59d31878d21a48bf1 NA Primary Blood Derived Cancer - Peripheral Blood C3N-00466.MethArray.Red.Tpb C3N-00466 AML Methylation Array tumor_peripheral_blood CPT0023040001 202163550007_R08C01_Red.idat 13676226 IDAT Red 490313e4-9601-464d-a661-0fa284fbf898 d6c7b1bd85e93c49a3e25ea5a1829bc8 NA Primary Blood Derived Cancer - Peripheral Blood @@ -16616,7 +17024,9 @@ C3N-00494.WXS.A C3N-00494 CCRCC WXS tissue_normal CPT0012920009 CPT0012920009.Wh C3N-00494.WXS.A.hg38 C3N-00494 CCRCC WXS tissue_normal CPT0012920009 f2cba9d9-e207-403e-9503-3866a6d4d880_wxs_gdc_realn.bam 40465910541 BAM NA 75d6b734-1ed0-4186-a436-5ed4d2b0605c 8dda5a099c0a1464d1c241a037acb80f hg38 Solid Tissue Normal C3N-00494.WXS.N C3N-00494 CCRCC WXS blood_normal CPT0012980002 CPT0012980002.WholeExome.RP-1303.bam 22910181033 BAM NA 556501bb-8d4c-4ee8-bec3-247eba9332a9 2c770a3c71c597050899dd9c7b23897d hg19 Blood Derived Normal C3N-00494.WXS.N.hg38 C3N-00494 CCRCC WXS blood_normal CPT0012980002 77c492cd-10e7-45f0-a55d-68b7ca8101ff_gdc_realn.bam 31153675734 BAM NA b619cdc5-a036-42f3-8e92-276a81a52866 c7f58a02f4f3e24c5bbf6af19ec4a668 hg38 Blood Derived Normal +C3N-00494.WXS.T C3N-00494 CCRCC WXS tumor CPT0012880006 CPT0012880006.WholeExome.RP-1303.bam 22127827129 BAM NA 9a9b9068-4c38-45e3-82e4-423b4b7c8fbd a55249d0385b3f3b52b5b6b147be6c89 hg19 Primary Tumor C3N-00494.WXS.T C3N-00494 CCRCC WXS tumor CPT0012900010 CPT0012900010.WholeExome.RP-1303.bam 26984326329 BAM NA 19a381a0-b72f-4659-bdd0-aba4e89adf1c 3516d9122d89b21a72e77b056d2e42c9 hg19 Primary Tumor +C3N-00494.WXS.T C3N-00494 CCRCC WXS tumor CPT0012910006 CPT0012910006.WholeExome.RP-1303.bam 21688955169 BAM NA 2db36a86-7dd5-4423-9b1a-d8e2f05d8967 c1b5e21dfb30a8ff20ca55bfbc0aced0 hg19 Primary Tumor C3N-00494.WXS.T.hg38 C3N-00494 CCRCC WXS tumor CPT0012900010 6f1a51d2-1199-4988-bb66-719b652cd7df_gdc_realn.bam 36953774725 BAM NA d13873ad-167d-40e3-b2e4-5a829a1810fc e7e48c54bb6425694d8b0586c3a7dafa hg38 Primary Tumor C3N-00495.MethArray.Green.T C3N-00495 CCRCC Methylation Array tumor CPT0078510009 202178770111_R05C01_Grn.idat 13676231 IDAT Green f0c2d541-3eb2-4197-bfc9-d36b950dbd2d e778cecd43a54208a7cf6a4cd9643119 NA Primary Tumor C3N-00495.MethArray.Red.T C3N-00495 CCRCC Methylation Array tumor CPT0078510009 202178770111_R05C01_Red.idat 13676231 IDAT Red 52fefd7a-c3a7-4b33-bfa9-951fda3b13a9 10bf04d7d7883c0438e56bdda1626856 NA Primary Tumor @@ -17358,6 +17768,9 @@ C3N-00573.WXS.A C3N-00573 CCRCC WXS tissue_normal CPT0069010009 CPT0069010009.Wh C3N-00573.WXS.A.hg38 C3N-00573 CCRCC WXS tissue_normal CPT0069010009 b641e57a-2b34-4d36-bd2e-8a3a54b988b8_wxs_gdc_realn.bam 48348802385 BAM NA 5783af03-1720-410e-af8b-c90c4df4069e b0797853390ea4ba96827cada96c0d4d hg38 Solid Tissue Normal C3N-00573.WXS.N C3N-00573 CCRCC WXS blood_normal CPT0069090002 CPT0069090002.WholeExome.RP-1303.bam 29689663218 BAM NA 31b882bd-d0b5-4da6-8bf2-ee747facdecf fd20c25f00c19df6a7625046dbe600ad hg19 Blood Derived Normal C3N-00573.WXS.N.hg38 C3N-00573 CCRCC WXS blood_normal CPT0069090002 366e021b-ebe0-4ef7-8a77-80f237dc316d_gdc_realn.bam 39789493860 BAM NA 61d8df3e-f0bc-4831-aada-a79f9afb58f3 5ffe7d1ecef3b1542e26bcf206c5e1f4 hg38 Blood Derived Normal +C3N-00573.WXS.T C3N-00573 CCRCC WXS tumor CPT0068970009 CPT0068970009.WholeExome.RP-1303.bam 21881307452 BAM NA 8e6eed61-850f-4d6e-bc28-89f529d98821 6f3fac59c6f4c594ea941f751b24c47c hg19 Primary Tumor +C3N-00573.WXS.T C3N-00573 CCRCC WXS tumor CPT0068980009 CPT0068980009.WholeExome.RP-1303.bam 24805270574 BAM NA f32bf482-1f8c-4045-82f0-5d8578ed7738 636d8a4eea10fe61341f92506bdd0bbb hg19 Primary Tumor +C3N-00573.WXS.T C3N-00573 CCRCC WXS tumor CPT0068990009 CPT0068990009.WholeExome.RP-1303.bam 20319562957 BAM NA dc98df8e-b119-4588-85f6-c5e77cfb412e ee393af6d1da56e8a83726e120e129d1 hg19 Primary Tumor C3N-00573.WXS.T C3N-00573 CCRCC WXS tumor CPT0069000006 CPT0069000006.WholeExome.RP-1303.bam 25210466686 BAM NA cfef351c-5632-4fb9-bc3d-d9bac78493d1 31b202d622aa79be67276fc7432082da hg19 Primary Tumor C3N-00573.WXS.T.hg38 C3N-00573 CCRCC WXS tumor CPT0069000006 631f5939-bd6d-4a1e-8476-e2fee9ebe6c4_gdc_realn.bam 34690882500 BAM NA fa3d2f42-f366-4dc6-a4a0-e49cddfc61dc d57ce7d11c3b97fabcc18ca0e365bc2e hg38 Primary Tumor C3N-00574.MethArray.Green.A C3N-00574 LUAD Methylation Array tissue_normal CPT0090900010 203028200023_R05C01_Grn.idat 13676241 IDAT Green 5f8770ac-d592-47e8-976b-b5da2d00384e e567e3b70ec79f440eb82a8be4104fd8 NA Solid Tissue Normal @@ -17601,7 +18014,10 @@ C3N-00646.WXS.A C3N-00646 CCRCC WXS tissue_normal CPT0082010009 CPT0082010009.Wh C3N-00646.WXS.A.hg38 C3N-00646 CCRCC WXS tissue_normal CPT0082010009 7b64790d-6ba3-4ed9-8997-b22c0c22348c_wxs_gdc_realn.bam 62721824878 BAM NA 0d2df8d1-4799-457e-a213-3784821eab49 e2bd754cb313c46cbfdb5d117624b427 hg38 Solid Tissue Normal C3N-00646.WXS.N C3N-00646 CCRCC WXS blood_normal CPT0082030002 CPT0082030002.WholeExome.RP-1303.bam 26787959958 BAM NA 88bb2978-cc22-4793-bd92-d547c6db4bba fc90b05693024a91f83e26b7d5dd1942 hg19 Blood Derived Normal C3N-00646.WXS.N.hg38 C3N-00646 CCRCC WXS blood_normal CPT0082030002 cd161335-d26a-4e88-9cbf-412997314bc7_gdc_realn.bam 36018660531 BAM NA 76ce08e4-2fd8-40e7-a591-2bfb0a3826d7 0047bc5ac24651d2ad985f28cc064a22 hg38 Blood Derived Normal +C3N-00646.WXS.T C3N-00646 CCRCC WXS tumor CPT0081970009 CPT0081970009.WholeExome.RP-1303.bam 19796533988 BAM NA b77ceaed-8ed8-4315-97e9-97f20598bac4 08c738067a4c058f8dbc128995d40f77 hg19 Primary Tumor +C3N-00646.WXS.T C3N-00646 CCRCC WXS tumor CPT0081980008 CPT0081980008.WholeExome.RP-1303.bam 20906214143 BAM NA ee040be6-4430-4591-9d9c-a63f92a63546 7406045262207e71d4469344eec53c68 hg19 Primary Tumor C3N-00646.WXS.T C3N-00646 CCRCC WXS tumor CPT0081990006 CPT0081990006.WholeExome.RP-1303.bam 37964291811 BAM NA 09c48bdf-dc11-4f57-ba46-9f51cd5d0886 196e492023f8db598d12d5bcb64e5314 hg19 Primary Tumor +C3N-00646.WXS.T C3N-00646 CCRCC WXS tumor CPT0082000009 CPT0082000009.WholeExome.RP-1303.bam 21753433747 BAM NA 5ce44bf2-33d0-45a3-a24b-4af3178f2c5a f4a989433bbe2d7bcf6d257d5c3cbf14 hg19 Primary Tumor C3N-00646.WXS.T.hg38 C3N-00646 CCRCC WXS tumor CPT0081990006 decf1bd7-19b4-488c-a3ee-fec1eab0652d_gdc_realn.bam 53804459969 BAM NA 8c875266-61e6-4945-8e8b-c603b9b00b4b 4eedc060754705e3497d21a5f33dc6a3 hg38 Primary Tumor C3N-00647.MethArray.Green.T C3N-00647 CCRCC Methylation Array tumor CPT0210400010 203219760074_R07C01_Grn.idat 13676236 IDAT Green 89f22404-d3e9-47d9-a9e3-5e47cea0a2f3 c80c9858d046b444eed8f7c500a328bd NA Primary Tumor C3N-00647.MethArray.Red.T C3N-00647 CCRCC Methylation Array tumor CPT0210400010 203219760074_R07C01_Red.idat 13676236 IDAT Red cbd595f1-3f6e-475e-a544-2e8166219384 d446b91b6d2c8b184e07b65a443fac84 NA Primary Tumor @@ -17869,6 +18285,7 @@ C3N-00733.WXS.N C3N-00733 CCRCC WXS blood_normal CPT0028480002 CPT0028480002.Who C3N-00733.WXS.N.hg38 C3N-00733 CCRCC WXS blood_normal CPT0028480002 c29ed504-d297-4fc3-ad09-200319492ed4_gdc_realn.bam 36976648847 BAM NA a4d7873b-dd6b-4f7d-bd66-ed3379d93007 14dbf41bc07122b3f3a7a452809aafcc hg38 Blood Derived Normal C3N-00733.WXS.T C3N-00733 CCRCC WXS tumor CPT0025880009 CPT0025880009.WholeExome.RP-1303.bam 26311645155 BAM NA a0740eef-1b59-412e-9a8f-3bc23ac32118 25017768fec088a13e94212dbfa4278b hg19 Primary Tumor C3N-00733.WXS.T C3N-00733 CCRCC WXS tumor CPT0025890012 CPT0025890012.WholeExome.RP-1303.bam 19288413298 BAM NA 732ccd38-ca36-45f9-9f8e-735ec1c0eb09 99d4f82924d1b0c1c0d6564ea6b6ec58 hg19 Primary Tumor +C3N-00733.WXS.T C3N-00733 CCRCC WXS tumor CPT0025900009 CPT0025900009.WholeExome.RP-1303.bam 21870644758 BAM NA d95dfbb6-d3b2-4f0a-93ea-da6621ce09d4 9a8c5750e4961361229a9709f9978c7c hg19 Primary Tumor C3N-00733.WXS.T.hg38 C3N-00733 CCRCC WXS tumor CPT0025880009 2ad75cb1-668a-4d5a-b62c-254e0b82d045_gdc_realn.bam 36133726733 BAM NA 2475e5cf-cadc-48ea-af0e-fc1b20eaf8a8 7096527d318250909c775e2bba0cf918 hg38 Primary Tumor C3N-00734.MethArray.Green.T C3N-00734 UCEC Methylation Array tumor CPT0026030010 202178770083_R01C01_Grn.idat 13676231 IDAT Green ec216333-38e0-450c-80a1-4e772ff8c366 1f4dd59576250e512f31bb2cdc3feda6 NA Primary Tumor C3N-00734.MethArray.Red.T C3N-00734 UCEC Methylation Array tumor CPT0026030010 202178770083_R01C01_Red.idat 13676231 IDAT Red 0b6317cf-1057-479b-80d8-89a9c2b8a988 e5e68ca1aa753c4b678733905593da1a NA Primary Tumor @@ -18326,6 +18743,8 @@ C3N-00852.WXS.A C3N-00852 CCRCC WXS tissue_normal CPT0024680009 CPT0024680009.Wh C3N-00852.WXS.A.hg38 C3N-00852 CCRCC WXS tissue_normal CPT0024680009 bad0565e-7226-4406-b438-ad25656f1243_wxs_gdc_realn.bam 37347719814 BAM NA 6635c748-3d17-4786-94f9-af50fd67c920 a4ba4e09c12fae1fbc7dc8c7a74c8125 hg38 Solid Tissue Normal C3N-00852.WXS.N C3N-00852 CCRCC WXS blood_normal CPT0024740002 CPT0024740002.WholeExome.RP-1303.bam 23068087243 BAM NA 55de5312-e9d9-4d8e-b772-baa4e90d84b4 33158780b510ccd293cae20b9e232509 hg19 Blood Derived Normal C3N-00852.WXS.N.hg38 C3N-00852 CCRCC WXS blood_normal CPT0024740002 85fedd41-5ca0-47c2-8d24-64e0c067178b_gdc_realn.bam 31571603166 BAM NA 9107d71e-50fa-4099-aff1-40319ef93b2f ea3d4adbbe3666b6688dcb4381c4d655 hg38 Blood Derived Normal +C3N-00852.WXS.T C3N-00852 CCRCC WXS tumor CPT0024650012 CPT0024650012.WholeExome.RP-1303.bam 21611501385 BAM NA 3e21a8a7-29c7-4281-b40f-1428af5758bb 1d9d1d3ebad3436f2b8c7bb11ce46b63 hg19 Primary Tumor +C3N-00852.WXS.T C3N-00852 CCRCC WXS tumor CPT0024660012 CPT0024660012.WholeExome.RP-1303.bam 24736057787 BAM NA bc12caf2-7e61-4eeb-92e2-b0d9f7a28b5d 64b626d5c127ca8696d57d43108dce27 hg19 Primary Tumor C3N-00852.WXS.T C3N-00852 CCRCC WXS tumor CPT0024670009 CPT0024670009.WholeExome.RP-1303.bam 20682126060 BAM NA c5b1b709-a52e-474c-83d3-e5bef1c37351 ebf74f4c230bb371ee0dd02b3d7e8a86 hg19 Primary Tumor C3N-00852.WXS.T.hg38 C3N-00852 CCRCC WXS tumor CPT0024670009 f9ac248b-a3c7-47f9-898e-8322e72b6b48_gdc_realn.bam 28220494250 BAM NA 6cc1f066-bd5a-40e4-931e-c0921cc4dc0e eadd4283f2d36608bfd97e344b23eea5 hg38 Primary Tumor C3N-00853.MethArray.Green.T C3N-00853 SAR Methylation Array tumor CPT0024290009 202176300111_R01C01_Grn.idat 13676226 IDAT Green 319f7bb4-4650-4ead-a211-07ae9674fbae 9175aaad2185f87feabcbe3a476018c7 NA Primary Tumor @@ -18582,7 +19001,9 @@ C3N-00953.WGS.T C3N-00953 CCRCC WGS tumor CPT0065440009 CPT0065440009.WholeGenom C3N-00953.WGS.T.hg38 C3N-00953 CCRCC WGS tumor CPT0065430009 91cf314a-8f4d-4f05-bd33-1b7eef5974af_gdc_realn.bam 103045029409 BAM NA 2b435898-48e1-4a4c-983e-5b250ce6e3e4 4ed9222444a1e78ec2f0f334ea2b2d16 hg38 Primary Tumor C3N-00953.WXS.N C3N-00953 CCRCC WXS blood_normal CPT0070680002 CPT0070680002.WholeExome.RP-1303.bam 37309118486 BAM NA eb1bbff3-def7-4677-963b-64483ff6694d f26c9ec4369e5bd81f8824c13b1a7943 hg19 Blood Derived Normal C3N-00953.WXS.N.hg38 C3N-00953 CCRCC WXS blood_normal CPT0070680002 c1eb9e6d-669b-4d1c-83c6-9710f4c80717_gdc_realn.bam 52512534170 BAM NA dceac80d-e43b-4f91-a3da-34fa539976f3 a18b700045f0d130fb868ff8528b6553 hg38 Blood Derived Normal +C3N-00953.WXS.T C3N-00953 CCRCC WXS tumor CPT0065220009 CPT0065220009.WholeExome.RP-1303.bam 24402496408 BAM NA 0c67bf6e-4689-405c-92dc-6392774e8b93 e6e1ba3d4fcf103927572105040b6c83 hg19 Primary Tumor C3N-00953.WXS.T C3N-00953 CCRCC WXS tumor CPT0065430009 CPT0065430009.WholeExome.RP-1303.bam 26165634565 BAM NA 34af8b1f-d82e-4681-8cad-76b86b1ee0bb c86c690bd6a7d5e924797139ba54b6c5 hg19 Primary Tumor +C3N-00953.WXS.T C3N-00953 CCRCC WXS tumor CPT0065440009 CPT0065440009.WholeExome.RP-1303.bam 23354354468 BAM NA 7b6c48a4-4bb3-4ec6-8548-c33158b4bfb2 7b4ce099ea6416d2f7b672a874684e8e hg19 Primary Tumor C3N-00953.WXS.T.hg38 C3N-00953 CCRCC WXS tumor CPT0065430009 91cf314a-8f4d-4f05-bd33-1b7eef5974af_gdc_realn.bam 35792432243 BAM NA 23178ce9-1b2c-4276-a96d-1bf7e6c5e740 8910a20c507fbad498044a73f652af00 hg38 Primary Tumor C3N-00954.MethArray.Green.A C3N-00954 PDA Methylation Array tissue_normal CPT0065100006 203561620052_R08C01_Grn.idat 13676212 IDAT Green e5326f61-c16e-4782-b000-6f054996c5e8 86187d3285503ee747b6acad7c5d5409 NA Solid Tissue Normal C3N-00954.MethArray.Green.T.deprecated C3N-00954 PDA Methylation Array tumor CPT0065080013 202176290105_R08C01_Grn.idat 13676216 IDAT Green d0bd7369-3496-4abe-b2e6-07a84473890d 6174daf0699b084d315e49c40743301e NA Primary Tumor @@ -19935,9 +20356,11 @@ C3N-01200.WXS.A C3N-01200 CCRCC WXS tissue_normal CPT0075170009 CPT0075170009.Wh C3N-01200.WXS.A.hg38 C3N-01200 CCRCC WXS tissue_normal CPT0075170009 6197fa8a-3d40-4e44-a89c-afcc3ad4d564_wxs_gdc_realn.bam 44911088732 BAM NA 458e55be-e2d1-4164-b7d2-4ea808be7d57 71e375365d6e9c02fc92baef0faf7325 hg38 Solid Tissue Normal C3N-01200.WXS.N C3N-01200 CCRCC WXS blood_normal CPT0075240001 CPT0075240001.WholeExome.RP-1303.bam 31160390089 BAM NA 11a7c5f1-b580-411c-9318-f63d567110b7 9f0f2d6771f6b40f6c8c8964c230e3d3 hg19 Blood Derived Normal C3N-01200.WXS.N.hg38 C3N-01200 CCRCC WXS blood_normal CPT0075240001 985b6a8c-9bee-4c84-beb6-289937143d49_gdc_realn.bam 42998051781 BAM NA 5ed7729f-924d-4be2-ac4d-9b8722e10eb9 083cd6e59c0460f28dd48fdcb5ff9c55 hg38 Blood Derived Normal +C3N-01200.WXS.T C3N-01200 CCRCC WXS tumor CPT0075120012 CPT0075120012.WholeExome.RP-1303.bam 23082960311 BAM NA 6d28cc3b-098e-4ff9-8652-8efa52af5a30 21b037efc9cf5b2a76d8375348239f36 hg19 Primary Tumor C3N-01200.WXS.T C3N-01200 CCRCC WXS tumor CPT0075130009 CPT0075130009.WholeExome.RP-1303.bam 26200407707 BAM NA 9534c18d-4932-4e28-a4c8-208dec038af6 73a424efcb860c6e669b64c20caccd71 hg19 Primary Tumor C3N-01200.WXS.T C3N-01200 CCRCC WXS tumor CPT0075140012 CPT0075140012.WholeExome.RP-1303.bam 17652148334 BAM NA 85d3d62f-66c7-4401-b60d-d111390beb20 622941b082d68dcfa862bc301a307609 hg19 Primary Tumor C3N-01200.WXS.T C3N-01200 CCRCC WXS tumor CPT0075150012 CPT0075150012.WholeExome.RP-1303.bam 17384489169 BAM NA 64b4c77e-805a-4c3a-8334-b4d6419b0bfa 2e9dad3cd3c567af041fd387b9c6e50a hg19 Primary Tumor +C3N-01200.WXS.T C3N-01200 CCRCC WXS tumor CPT0075160012 CPT0075160012.WholeExome.RP-1303.bam 21644696504 BAM NA f563bce9-fe03-417f-9634-f1aa95057fa3 d50528e4c919bffd7b756beb1dd429a1 hg19 Primary Tumor C3N-01200.WXS.T.hg38 C3N-01200 CCRCC WXS tumor CPT0075130009 0d15156f-e4c5-45a2-8904-33c991c2fd17_gdc_realn.bam 36200071299 BAM NA 7ede714a-8cfc-4b71-a2d2-1e78c68ce6cf e908c064d993b2a58ab73c7cad939f98 hg38 Primary Tumor C3N-01211.MethArray.Green.T C3N-01211 UCEC Methylation Array tumor CPT0075900009 202176290046_R08C01_Grn.idat 13676215 IDAT Green 07d13ad1-12a3-4cc8-974e-a8b0e47f5cd7 aa58e582889db6aeed9da59c19d6d9a8 NA Primary Tumor C3N-01211.MethArray.Red.T C3N-01211 UCEC Methylation Array tumor CPT0075900009 202176290046_R08C01_Red.idat 13676215 IDAT Red cc27c8da-ccc7-48db-ac0a-05811406b761 4e16b278ab5abbfe81541f18fd929aed NA Primary Tumor @@ -20172,6 +20595,8 @@ C3N-01334.RNA-Seq.genomic.T.hg38 C3N-01334 GBM RNA-Seq tumor CPT0125220009 5df0c C3N-01334.RNA-Seq.R1.T C3N-01334 GBM RNA-Seq tumor CPT0125220009 180516_UNC31-K00269_0129_AHTWLFBBXX_CAGATC_S8_L007_R1_001.fastq.gz 3964104440 FASTQ NA 3cc957f8-1cd0-4197-96b8-30bd1a5cc776 85c17b002082377d2c99cc1d6e962e04 NA Primary Tumor C3N-01334.RNA-Seq.R2.T C3N-01334 GBM RNA-Seq tumor CPT0125220009 180516_UNC31-K00269_0129_AHTWLFBBXX_CAGATC_S8_L007_R2_001.fastq.gz 4396759449 FASTQ NA a6823ef4-4fb2-4188-8214-4de92ce913a2 baccb61de188456f5868f6a6ea2a68fb NA Primary Tumor C3N-01334.RNA-Seq.transcriptome.T.hg38 C3N-01334 GBM RNA-Seq tumor CPT0125220009 5df0c6c8-8eba-4338-8d89-b17e7850409e.rna_seq.transcriptome.gdc_realn.bam 8008207859 BAM transcriptome 876554f1-7d5f-47d8-9f50-ac4d65f5facc 95b89f0f16562a6a8fef171a091da761 hg38 Primary Tumor +C3N-01334.scRNA-Seq.R1.T C3N-01334 GBM scRNA-Seq tumor CPT0125220004 20200618_WUSTL_CPT0125220004_GCGCAGAA-ATCTTACC-TATGGTGT-CGAACCTG_S3_L001_R1_001.fastq.gz 9509432240 FASTQ NA 9c645991-b038-4ee7-9388-61b31e0f800b 61ffdb1fc8c97c668fddacdc441b119c NA Primary Tumor +C3N-01334.scRNA-Seq.R2.T C3N-01334 GBM scRNA-Seq tumor CPT0125220004 20200618_WUSTL_CPT0125220004_GCGCAGAA-ATCTTACC-TATGGTGT-CGAACCTG_S3_L001_R2_001.fastq.gz 22676722596 FASTQ NA 444e55b6-4c1c-437e-b097-1f6fe70ce245 7759b9bd6edca8c6e5eefc01bfca73ac NA Primary Tumor C3N-01334.WGS.N C3N-01334 GBM WGS blood_normal CPT0125250002 CPT0125250002.WholeGenome.RP-1303.bam 62961118881 BAM NA 998a823c-24d7-41ec-865a-62c9ee65a71b 508d106bef15c7131942375e690581f4 hg19 Blood Derived Normal C3N-01334.WGS.N.hg38 C3N-01334 GBM WGS blood_normal CPT0125250002 1f02adc4-0b20-4fd3-ad08-5d4c6b3b4b18_wgs_gdc_realn.bam 90333471413 BAM NA 5980d118-12c4-440c-ba3d-3edfa259658a 0861cc27aa030704e8e9f2f7896aa8bb hg38 Blood Derived Normal C3N-01334.WGS.T C3N-01334 GBM WGS tumor CPT0125220006 CPT0125220006.WholeGenome.RP-1303.bam 62455774887 BAM NA 655943fb-8990-4690-8bd0-1586f06b911e 415f953131f169bdfc70c6554a0aa234 hg19 Primary Tumor @@ -21241,6 +21666,7 @@ C3N-01522.WXS.A.hg38 C3N-01522 CCRCC WXS tissue_normal CPT0077140009 63ac8e39-51 C3N-01522.WXS.N C3N-01522 CCRCC WXS blood_normal CPT0077230002 CPT0077230002.WholeExome.RP-1303.bam 33107189954 BAM NA 006db4eb-2028-4cba-b40f-a2da9e7831fd 64b06f1d0c313577208cd5898a55101d hg19 Blood Derived Normal C3N-01522.WXS.N.hg38 C3N-01522 CCRCC WXS blood_normal CPT0077230002 54d1fe86-bb61-483d-a650-a13697f5e4b5_gdc_realn.bam 45116067067 BAM NA 2cfcc93b-fea4-4e4a-8ac9-e6f0202c05f7 75a29400da74144fb141f951e0caa733 hg38 Blood Derived Normal C3N-01522.WXS.T C3N-01522 CCRCC WXS tumor CPT0077110009 CPT0077110009.WholeExome.RP-1303.bam 32767727766 BAM NA 1a93802e-a63e-40d8-985f-5a5d33ccaeee 2098f01f2e22b9ec68f43d07ca92e68e hg19 Primary Tumor +C3N-01522.WXS.T C3N-01522 CCRCC WXS tumor CPT0077120009 CPT0077120009.WholeExome.RP-1303.bam 18984065266 BAM NA d462bdc3-8afe-441d-b985-1c50c162571b b6e4b18faf8a6aae0f682620fedd4bcf hg19 Primary Tumor C3N-01522.WXS.T C3N-01522 CCRCC WXS tumor CPT0077130009 CPT0077130009.WholeExome.RP-1303.bam 19959736594 BAM NA e0f1306e-82c3-45c9-a59a-8dacdbd0797e 0b319d81dc8fa7866d7b91dc90e39598 hg19 Primary Tumor C3N-01522.WXS.T.hg38 C3N-01522 CCRCC WXS tumor CPT0077110009 c4027887-51e8-40b2-956a-ba6daf3ee157_gdc_realn.bam 44643903219 BAM NA c5bffbd5-ed94-4032-ae1b-e15439ccb39f 6d98bce6d0d1e9cad0732cec826ef27e hg38 Primary Tumor C3N-01523.MethArray.Green.T C3N-01523 SAR Methylation Array tumor CPT0095740009 202234370086_R06C01_Grn.idat 13676231 IDAT Green a1d3668e-c820-4d54-8dff-cd71a1ac9700 6b2dc2e779d04b1215108a507af75eab NA Primary Tumor @@ -22117,13 +22543,17 @@ C3N-01767.MethArray.Green.T C3N-01767 LSCC Methylation Array tumor CPT0321460006 C3N-01767.MethArray.Red.A C3N-01767 LSCC Methylation Array tissue_normal CPT0321470006 204367490056_R07C01_Red.idat 13677895 IDAT Red a7b354f0-b0a4-4bf5-8416-d1804190cc19 3be372212ce3bb51dbe6abccd75de102 NA Solid Tissue Normal C3N-01767.MethArray.Red.T C3N-01767 LSCC Methylation Array tumor CPT0321460006 204372030024_R02C01_Red.idat 13677905 IDAT Red b086203f-5e95-4bda-be3b-dcbd4acdac52 54511cba8eec87acaf35a0c1492b0cac NA Primary Tumor C3N-01767.miRNA-Seq.A C3N-01767 LSCC miRNA-Seq tissue_normal CPT0321470009 200513_UNC31-K00269_0278_BHH7Y7BBXY_ACTGAT_S25_L006_R1_001.unaln.bam 278939064 BAM NA ec2b8d1c-1290-42fa-a133-f786a034f01e c0f3c68bdf67553490b2364cc25b5f63 NA Solid Tissue Normal +C3N-01767.miRNA-Seq.A.hg38 C3N-01767 LSCC miRNA-Seq tissue_normal CPT0321470009 e360e895-68bd-4ef5-9780-3b07527fc228_mirnaseq_gdc_realn.bam 313238192 BAM NA a753b8ab-c463-41b2-a0fa-3a8a7123294c 1ab9aca17f50929d4978c04adb24fc05 hg38 Solid Tissue Normal C3N-01767.miRNA-Seq.T C3N-01767 LSCC miRNA-Seq tumor CPT0321460009 200224_UNC31-K00269_0267_AHC722BBXY_CTATAC_S39_L007_R1_001.unaln.bam 258536181 BAM NA 43f32783-e121-4131-8b10-f820dc9fd5c0 ab757d90de6f2a8416c26fa518a1a7f2 NA Primary Tumor +C3N-01767.miRNA-Seq.T.hg38 C3N-01767 LSCC miRNA-Seq tumor CPT0321460009 f0af4d65-0e5f-4c86-a4e3-c4c5c44c421a_mirnaseq_gdc_realn.bam 284784513 BAM NA ecd1b0b5-cc41-48d6-9c10-f23561dd527e 4e55bcf89f2fd8c9fc5394589c11c782 hg38 Primary Tumor C3N-01767.RNA-Seq.R1.A C3N-01767 LSCC RNA-Seq tissue_normal CPT0321470009 200505_UNC32-K00270_0246_BHH5F5BBXY_ACTAAGAT-AACCGCGG_S9_L003_R1_001.fastq.gz 4084108636 FASTQ NA 649a1980-a6d2-4dd1-b29b-9d8943d41ace a756295953018fad461666f270017c24 NA Solid Tissue Normal C3N-01767.RNA-Seq.R1.T C3N-01767 LSCC RNA-Seq tumor CPT0321460009 200428_UNC32-K00270_0243_AHG3Y3BBXY_TAAGTGGT-CTTAAGCC_S7_L002_R1_001.fastq.gz 3420470899 FASTQ NA 8e79de30-7b3c-4716-b4f2-7eca97352547 64abf5b9368846b4191203bb6617d998 NA Primary Tumor C3N-01767.RNA-Seq.R2.A C3N-01767 LSCC RNA-Seq tissue_normal CPT0321470009 200505_UNC32-K00270_0246_BHH5F5BBXY_ACTAAGAT-AACCGCGG_S9_L003_R2_001.fastq.gz 4909628844 FASTQ NA 866d1256-d6bb-4aa0-b5ea-16a2843410a7 65ebe2c7789838337e16ecb3d3fd7afb NA Solid Tissue Normal C3N-01767.RNA-Seq.R2.T C3N-01767 LSCC RNA-Seq tumor CPT0321460009 200428_UNC32-K00270_0243_AHG3Y3BBXY_TAAGTGGT-CTTAAGCC_S7_L002_R2_001.fastq.gz 3642460227 FASTQ NA 042d2e89-2d28-425c-ae7e-dd4dd80bddfb 0f084b9c0e332889b702561a41e8b899 NA Primary Tumor C3N-01767.WGS.N C3N-01767 LSCC WGS blood_normal CPT0321500002 CPT0321500002.WholeGenome.RP-2158.bam 24317652446 BAM NA f660ff25-e13c-48d7-acf0-cc6968325f7d 9766f0a94e538c39524668c7eee6ad32 hg19 Blood Derived Normal +C3N-01767.WGS.N.hg38 C3N-01767 LSCC WGS blood_normal CPT0321500002 d776e407-5302-45a0-8132-f5cb9827057b_wgs_gdc_realn.bam 72917295191 BAM NA 6014ac1c-0e43-4639-a4da-aa11ee71e8c7 4cef20d16ba33cbfa0120cfe3617969e hg38 Blood Derived Normal C3N-01767.WGS.T C3N-01767 LSCC WGS tumor CPT0321460006 CPT0321460006.WholeGenome.RP-2158.bam 22854197072 BAM NA bc0adb67-11b6-4526-b5c8-64c0e05bf0e9 8137c2a0059101b87aeab5a737569d4e hg19 Primary Tumor +C3N-01767.WGS.T.hg38 C3N-01767 LSCC WGS tumor CPT0321460006 8f5b7ba8-7564-4f6d-96ce-a72930454080_wgs_gdc_realn.bam 68948306476 BAM NA 960c774f-e227-4cc5-a62f-3922d196bfa1 ec05f1cfbdbdec9df1d5908d94e2a4f9 hg38 Primary Tumor C3N-01767.WXS.A C3N-01767 LSCC WXS tissue_normal CPT0321470006 CPT0321470006.WholeExome.RP-1303.bam 22938170291 BAM NA 6e91b34a-4caf-434f-a558-396275315354 e584054d4fad61e5f24688c9ade28fe9 hg19 Solid Tissue Normal C3N-01767.WXS.N C3N-01767 LSCC WXS blood_normal CPT0321500002 CPT0321500002.WholeExome.RP-1303.bam 19290589678 BAM NA f5020bcd-0fb3-4806-800e-164344ccc621 2f1c84b94012a277a9fa4284bc9c6cac hg19 Blood Derived Normal C3N-01767.WXS.T C3N-01767 LSCC WXS tumor CPT0321460006 CPT0321460006.WholeExome.RP-1303.bam 21197047234 BAM NA 56e689fd-433a-4531-94c9-d02a45ea1fd3 1f115af38dd62cd9549ce374c802b3f8 hg19 Primary Tumor @@ -22132,13 +22562,17 @@ C3N-01768.MethArray.Green.T C3N-01768 LSCC Methylation Array tumor CPT0321510006 C3N-01768.MethArray.Red.A C3N-01768 LSCC Methylation Array tissue_normal CPT0321520007 204372030106_R07C01_Red.idat 13677885 IDAT Red 8dbe97f4-0232-48c5-a1ad-9f76382642c5 4232e3e9b4282732940e7371a3e02f02 NA Solid Tissue Normal C3N-01768.MethArray.Red.T C3N-01768 LSCC Methylation Array tumor CPT0321510006 204367490093_R05C01_Red.idat 13677900 IDAT Red a3f38dcb-3122-4f7e-b332-8ca848aaadd4 68e1d41fd2c0bd9a3d239d47d997d20f NA Primary Tumor C3N-01768.miRNA-Seq.A C3N-01768 LSCC miRNA-Seq tissue_normal CPT0321520010 200325_UNC31-K00269_0272_AHHC2NBBXY_CAGGCG_S9_L001_R1_001.unaln.bam 181632693 BAM NA 668f6789-5615-4c75-84ec-44a7b65d8298 02322da7a77bca3c6554a26d6c96ec93 NA Solid Tissue Normal +C3N-01768.miRNA-Seq.A.hg38 C3N-01768 LSCC miRNA-Seq tissue_normal CPT0321520010 c4737c06-9e08-487e-9e38-137ec9218e86_mirnaseq_gdc_realn.bam 204664640 BAM NA ebbe7a21-f275-4170-822f-e9ff333c0133 9a36a20090a25cccfed4c3fe52b71d19 hg38 Solid Tissue Normal C3N-01768.miRNA-Seq.T C3N-01768 LSCC miRNA-Seq tumor CPT0321510009 200224_UNC31-K00269_0267_AHC722BBXY_CTCAGA_S40_L007_R1_001.unaln.bam 151075223 BAM NA 850ca6cc-a1ed-4bb9-bd94-fc7215eed4e4 13e97484417a5f35c4b6fc467fe195d2 NA Primary Tumor +C3N-01768.miRNA-Seq.T.hg38 C3N-01768 LSCC miRNA-Seq tumor CPT0321510009 25be4b4d-bfa8-416c-970c-16dd372a22ed_mirnaseq_gdc_realn.bam 170089882 BAM NA c6afc43e-da34-4a31-87c3-92f45bf35687 457ea2afc50a01438493951f210957eb hg38 Primary Tumor C3N-01768.RNA-Seq.R1.A C3N-01768 LSCC RNA-Seq tissue_normal CPT0321520010 200428_UNC31-K00269_0275_AHGCJVBBXY_AACTGTAG-ACGCCGCA_S17_L005_R1_001.fastq.gz 3904926175 FASTQ NA ff49099c-84c9-4b43-95bf-cf49d08c1306 6f98e4ee3927dd6af509fb4dc5576347 NA Solid Tissue Normal C3N-01768.RNA-Seq.R1.T C3N-01768 LSCC RNA-Seq tumor CPT0321510009 200428_UNC32-K00270_0243_AHG3Y3BBXY_CGGACAAC-TCCGGATT_S8_L002_R1_001.fastq.gz 4086471599 FASTQ NA 7ccc431f-666a-4768-9062-f988c0d3d0fb a32f6ea1e7e76e61205f3d361dc48d7c NA Primary Tumor C3N-01768.RNA-Seq.R2.A C3N-01768 LSCC RNA-Seq tissue_normal CPT0321520010 200428_UNC31-K00269_0275_AHGCJVBBXY_AACTGTAG-ACGCCGCA_S17_L005_R2_001.fastq.gz 4082260248 FASTQ NA 658408cb-4d41-4938-860a-475a8db3c829 09986d67ee3293301a20edbc47d302a4 NA Solid Tissue Normal C3N-01768.RNA-Seq.R2.T C3N-01768 LSCC RNA-Seq tumor CPT0321510009 200428_UNC32-K00270_0243_AHG3Y3BBXY_CGGACAAC-TCCGGATT_S8_L002_R2_001.fastq.gz 4332523665 FASTQ NA 80d49158-38aa-452a-aec9-2639d913b7bd 01da92f2ce0431abfff337d2d37bb41a NA Primary Tumor C3N-01768.WGS.N C3N-01768 LSCC WGS blood_normal CPT0321570002 CPT0321570002.WholeGenome.RP-2158.bam 31767677160 BAM NA 2225e00f-81ea-45c2-bffb-bd2bee203423 3288289cbe0cca73174ffbe7d30ae507 hg19 Blood Derived Normal +C3N-01768.WGS.N.hg38 C3N-01768 LSCC WGS blood_normal CPT0321570002 886127a1-cd4e-4529-aef1-8f1d1c4c0b45_wgs_gdc_realn.bam 93088951602 BAM NA 2891e61e-9bd9-4d13-9464-8f400cf56e48 442d2f7bdd94803a12e7586f655e8117 hg38 Blood Derived Normal C3N-01768.WGS.T C3N-01768 LSCC WGS tumor CPT0321510006 CPT0321510006.WholeGenome.RP-2158.bam 24801840088 BAM NA 427d9252-69b5-4f48-8323-a719765e3780 d0cdfa7b5bbfd513708f5587bb07e499 hg19 Primary Tumor +C3N-01768.WGS.T.hg38 C3N-01768 LSCC WGS tumor CPT0321510006 a4ebedaa-1f18-4ae2-9780-4c700c702a5f_wgs_gdc_realn.bam 72094930863 BAM NA 1692c0c9-db04-4436-b4c8-8f1fc8bb0947 8010d13a1ef2c90237696e12791332d2 hg38 Primary Tumor C3N-01768.WXS.A C3N-01768 LSCC WXS tissue_normal CPT0321520007 CPT0321520007.WholeExome.RP-1303.bam 24024487355 BAM NA 0f16c9f0-6a94-4352-b978-a2acbb8d6af3 6a9c1952da48b904f38dcb3922d26bb9 hg19 Solid Tissue Normal C3N-01768.WXS.N C3N-01768 LSCC WXS blood_normal CPT0321570002 CPT0321570002.WholeExome.RP-1303.bam 35584360083 BAM NA cf36e13e-9476-49aa-aa72-a810535926e7 e87a46c9f85943008f5e8d89dc1355b3 hg19 Blood Derived Normal C3N-01768.WXS.T C3N-01768 LSCC WXS tumor CPT0321510006 CPT0321510006.WholeExome.RP-1303.bam 18164610686 BAM NA dba9ef64-cfa3-4345-9a44-c41d8b687b44 2b918eb9879fc4a993f8a7eefdd3f0d3 hg19 Primary Tumor @@ -22314,6 +22748,8 @@ C3N-01816.RNA-Seq.genomic.T.hg38 C3N-01816 GBM RNA-Seq tumor CPT0168080009 10763 C3N-01816.RNA-Seq.R1.T C3N-01816 GBM RNA-Seq tumor CPT0168080009 180516_UNC31-K00269_0130_BHV22JBBXX_AGTTCC_S6_L002_R1_001.fastq.gz 4266443871 FASTQ NA d4c2e7c6-bb6b-485e-8d1e-08fe07af549c 63014661469f791d6d34f8d928c76dcc NA Primary Tumor C3N-01816.RNA-Seq.R2.T C3N-01816 GBM RNA-Seq tumor CPT0168080009 180516_UNC31-K00269_0130_BHV22JBBXX_AGTTCC_S6_L002_R2_001.fastq.gz 4629196221 FASTQ NA c37234b3-f608-4174-a9fd-a03511073262 11f74064b03ae68a012ee822f02eae39 NA Primary Tumor C3N-01816.RNA-Seq.transcriptome.T.hg38 C3N-01816 GBM RNA-Seq tumor CPT0168080009 10763311-cf6a-47d9-9777-39867a9ffd00.rna_seq.transcriptome.gdc_realn.bam 11300019868 BAM transcriptome 6f01eeaa-6b83-47f2-a3c8-de4d66a1d273 1ae60f8944cb832957135b3da3264c67 hg38 Primary Tumor +C3N-01816.scRNA-Seq.R1.T C3N-01816 GBM scRNA-Seq tumor CPT0168080014 20200608_WUSTL_CPT0168080014_AGGCTACC-CTAGCTGT-GCCAACAA-TATTGGTG_S1_L003_R1_001.fastq.gz 9910411370 FASTQ NA 29127cc1-d844-4345-9bf5-d1844e1c2c70 afd2e3f2bd7f203ae697f374657c61ad NA Primary Tumor +C3N-01816.scRNA-Seq.R2.T C3N-01816 GBM scRNA-Seq tumor CPT0168080014 20200608_WUSTL_CPT0168080014_AGGCTACC-CTAGCTGT-GCCAACAA-TATTGGTG_S1_L003_R2_001.fastq.gz 24642737722 FASTQ NA a4e613cb-85fc-4ecc-8f13-af9809e13f88 6434cd1f75bb00d9adc103d303e770b8 NA Primary Tumor C3N-01816.WGS.N C3N-01816 GBM WGS blood_normal CPT0168120002 CPT0168120002.WholeGenome.RP-1303.bam 62511736580 BAM NA 0301404e-c1d2-44f0-a649-ae43d93119e1 1295d8161fb2e1d42a380d0278fb30d7 hg19 Blood Derived Normal C3N-01816.WGS.N.hg38 C3N-01816 GBM WGS blood_normal CPT0168120002 0582feca-5f76-4ca8-99a1-2183174f62a9_wgs_gdc_realn.bam 91027023070 BAM NA 96df1f35-0652-480a-90cf-9b4e184b5fa3 ca391ba69c0b6ef9b2169aacb744b1cb hg38 Blood Derived Normal C3N-01816.WGS.T C3N-01816 GBM WGS tumor CPT0168080006 CPT0168080006.WholeGenome.RP-1303.bam 56381322083 BAM NA c33aa02f-33e0-45db-97a8-85b741b55b51 98494c91c4d5ca839546005311c2ffb4 hg19 Primary Tumor @@ -22595,10 +23031,13 @@ C3N-01848.WXS.T.hg38 C3N-01848 UCEC WXS tumor CPT0099050009 b2c00315-f249-4e89-8 C3N-01849.MethArray.Green.T C3N-01849 GBM Methylation Array tumor CPT0224780006 204367490048_R02C01_Grn.idat 13677885 IDAT Green 7af526c7-8356-4326-bdbe-617c651f9641 8aac2ade361defa86852d283b4300f6d NA Primary Tumor C3N-01849.MethArray.Red.T C3N-01849 GBM Methylation Array tumor CPT0224780006 204367490048_R02C01_Red.idat 13677885 IDAT Red c8bc6ee7-95dc-48a6-8d12-12283d8df444 b74a22bb7cd9c76b950dd3439a10f1a9 NA Primary Tumor C3N-01849.miRNA-Seq.T C3N-01849 GBM miRNA-Seq tumor CPT0224780009 200403_UNC31-K00269_0274_AHCF7GBBXY_GTAGAG_S41_L002_R1_001.unaln.bam 228567039 BAM NA 3dbe979d-bd63-4379-9bf1-d5a114081b2e a3fc92c38e8b4f9cb4c8f89e694ba320 NA Primary Tumor +C3N-01849.miRNA-Seq.T.hg38 C3N-01849 GBM miRNA-Seq tumor CPT0224780009 16162ec0-7b2d-40a5-ac4a-bb5b5cb57f5e_mirnaseq_gdc_realn.bam 252060926 BAM NA c25da38d-81d8-4793-839d-6109462fa3d5 0ff6eb823c23c990f5f9caf6e8e0b261 hg38 Primary Tumor C3N-01849.RNA-Seq.R1.T C3N-01849 GBM RNA-Seq tumor CPT0224780009 200204_UNC31-K00269_0263_AHG2CJBBXY_TAATACAG-ATATTCAC_S9_L003_R1_001.fastq.gz 3307839110 FASTQ NA 583387e2-75e7-4f09-be36-486effc226fd 275f694446a8e500c4f148c69f7dd131 NA Primary Tumor C3N-01849.RNA-Seq.R2.T C3N-01849 GBM RNA-Seq tumor CPT0224780009 200204_UNC31-K00269_0263_AHG2CJBBXY_TAATACAG-ATATTCAC_S9_L003_R2_001.fastq.gz 3845272244 FASTQ NA 83d649cc-79e9-457a-9e7f-e0fb46c94f8a 6b50106dd2476b2133b3a33b3f73b759 NA Primary Tumor C3N-01849.WGS.N C3N-01849 GBM WGS blood_normal CPT0224830002 CPT0224830002.WholeGenome.RP-2158.bam 26026553207 BAM NA 41abf016-07f9-4ad3-a5d6-861a86fc439c e6e9c9e206b70981c1e4eab89c64feca hg19 Blood Derived Normal +C3N-01849.WGS.N.hg38 C3N-01849 GBM WGS blood_normal CPT0224830002 bbc88737-e7c2-404f-a29c-d4eb9ad23e2d_wgs_gdc_realn.bam 78090125732 BAM NA 20c0f60b-3fab-4d2e-878b-23ad2d24d00a 1711ae80c896e021e0db28a9d227c358 hg38 Blood Derived Normal C3N-01849.WGS.T C3N-01849 GBM WGS tumor CPT0224780006 CPT0224780006.WholeGenome.RP-2158.bam 22035764736 BAM NA 6a6f9bda-1e93-4fa1-83d0-dd3e624844de ef78a03d4dc1f8fdc6a28202aa056d29 hg19 Primary Tumor +C3N-01849.WGS.T.hg38 C3N-01849 GBM WGS tumor CPT0224780006 049c6c50-80e2-46b6-bb4b-951301cf76f1_wgs_gdc_realn.bam 63623607195 BAM NA 1c6fb1d5-1bef-47ec-88bb-fbb2f185fc73 b9be9d365b2a7088ac07d70bcbc3fadc hg38 Primary Tumor C3N-01849.WXS.N C3N-01849 GBM WXS blood_normal CPT0224830002 CPT0224830002.WholeExome.RP-1303.bam 28026085376 BAM NA 70d01c24-e736-408e-8ddf-61c55dc60de4 b7e2854beca2d2129172d4e84fcc29d9 hg19 Blood Derived Normal C3N-01849.WXS.T C3N-01849 GBM WXS tumor CPT0224780006 CPT0224780006.WholeExome.RP-1303.bam 17373452560 BAM NA 65c12110-2efa-44de-a6a1-8823328fd1b0 976ce588b28ff245609a66e8692bfc8a hg19 Primary Tumor C3N-01850.MethArray.Green.T C3N-01850 GBM Methylation Array tumor CPT0125270009 203219650047_R08C01_Grn.idat 13676206 IDAT Green 986f4467-8c60-472b-b32c-afb23c642578 0f504f4dd24fbed25c9bd5b6c640cd02 NA Primary Tumor @@ -23521,8 +23960,10 @@ C3N-02030.RNA-Seq.transcriptome.T.hg38 C3N-02030 UCEC RNA-Seq tumor CPT013377001 C3N-02030.WGS.N C3N-02030 UCEC WGS blood_normal CPT0133880002 CPT0133880002.WholeGenome.RP-1303.bam 56644630837 BAM NA 215e1766-675e-4186-aef0-49dc4822aec1 00c76a434ceffe6c0dec2e26c0a9b512 hg19 Blood Derived Normal C3N-02030.WGS.N.hg38 C3N-02030 UCEC WGS blood_normal CPT0133880002 138b1cf0-0ac2-46d6-b211-35060de01e80_wgs_gdc_realn.bam 82771416633 BAM NA 6bef4527-ba45-445e-a6da-5b29ba4e4476 071626c6d37516519d379a17e2df418d hg38 Blood Derived Normal C3N-02030.WGS.T C3N-02030 UCEC WGS tumor CPT0133760076 CPT0133760076.WholeGenome.RP-2158.bam 25052943166 BAM NA 1c747cee-a357-4da4-bea9-96454dbfd420 16d8b09b2614d85f816d49047195edb0 hg19 Primary Tumor +C3N-02030.WGS.T C3N-02030 UCEC WGS tumor CPT0133760078 CPT0133760078.WholeGenome.RP-2158.bam 17147710287 BAM NA eeab7ce9-56b8-499a-a396-0f605d09735c ba21b9972631b4ba1190190784b0d7ab hg19 Primary Tumor C3N-02030.WGS.T C3N-02030 UCEC WGS tumor CPT0133760080 CPT0133760080.WholeGenome.RP-2158.bam 20531550838 BAM NA 8b5f2a0d-287d-477d-9677-a3b452b10d02 1ac8fa20b65c92e02b4f5a6f1eb46be5 hg19 Primary Tumor C3N-02030.WGS.T C3N-02030 UCEC WGS tumor CPT0133760082 CPT0133760082.WholeGenome.RP-2158.bam 30949053164 BAM NA c77518b5-e0c8-406e-9329-07c68c7d61ca 0e1ef9b9b1fc8d9b088bc5a8aa5546fb hg19 Primary Tumor +C3N-02030.WGS.T C3N-02030 UCEC WGS tumor CPT0133760083 CPT0133760083.WholeGenome.RP-2158.bam 15754014827 BAM NA 676124cb-fee7-4248-859d-4f94274171a8 f81b7b3094dc617f952620aad7931839 hg19 Primary Tumor C3N-02030.WGS.T C3N-02030 UCEC WGS tumor CPT0133770011 CPT0133770011.WholeGenome.RP-1303.bam 59880248248 BAM NA 7d97bcae-e9c5-47ca-957e-5d5e6a834605 aa437a348c9f8cc1ac913cc556e07503 hg19 Primary Tumor C3N-02030.WGS.T C3N-02030 UCEC WGS tumor CPT0133780091 CPT0133780091.WholeGenome.RP-2158.bam 30001609723 BAM NA 72051de1-573d-43b4-b4ae-c0ab9171756e e9a381f1b2f5fb7b48b9b86c03463bca hg19 Primary Tumor C3N-02030.WGS.T.hg38 C3N-02030 UCEC WGS tumor CPT0133770011 a81443de-b861-4bb8-ab23-501062de441f_wgs_gdc_realn.bam 87668734945 BAM NA 25031dfb-de49-4bc5-8937-907f5399c3de 5226a1c8942ef3bb377eb9b099fe3520 hg38 Primary Tumor @@ -24342,6 +24783,8 @@ C3N-02181.RNA-Seq.genomic.T.hg38 C3N-02181 GBM RNA-Seq tumor CPT0168380009 01cdf C3N-02181.RNA-Seq.R1.T C3N-02181 GBM RNA-Seq tumor CPT0168380009 180516_UNC31-K00269_0130_BHV22JBBXX_GTCCGC_S3_L001_R1_001.fastq.gz 4264542017 FASTQ NA cfb8fa20-a639-42fc-873a-9d07271e3122 be7f8c24345c061b57777f7ca4b1bcf8 NA Primary Tumor C3N-02181.RNA-Seq.R2.T C3N-02181 GBM RNA-Seq tumor CPT0168380009 180516_UNC31-K00269_0130_BHV22JBBXX_GTCCGC_S3_L001_R2_001.fastq.gz 4670211980 FASTQ NA b32e9f2c-4aae-4bd8-bc47-7134bc1bb92c 62bb18a19e1f201121b20d9c0a13b22f NA Primary Tumor C3N-02181.RNA-Seq.transcriptome.T.hg38 C3N-02181 GBM RNA-Seq tumor CPT0168380009 01cdfbec-b7b8-47bb-9b3c-04b9ceb89d19.rna_seq.transcriptome.gdc_realn.bam 10494815301 BAM transcriptome d1050a45-6a91-4f0d-afbc-8b9a0e4dc309 ba73d41fb26603523a9f7e083466a0c9 hg38 Primary Tumor +C3N-02181.scRNA-Seq.R1.T C3N-02181 GBM scRNA-Seq tumor CPT0168380014 20200611_WUSTL_CPT0168380014_GTGTATTA-TGTGCGGG-ACCATAAC-CAACGCCT_S4_L003_R1_001.fastq.gz 13201477088 FASTQ NA 37025c07-5429-415d-97b7-2146c0dea79d 7975a1e42ea5b6028d136606486f7a2b NA Primary Tumor +C3N-02181.scRNA-Seq.R2.T C3N-02181 GBM scRNA-Seq tumor CPT0168380014 20200611_WUSTL_CPT0168380014_GTGTATTA-TGTGCGGG-ACCATAAC-CAACGCCT_S4_L003_R2_001.fastq.gz 31578941138 FASTQ NA dbc7f1b2-21b1-4506-8c2d-fef4951a0b10 82e73bee1aa0fcff8affe78e57ed2aff NA Primary Tumor C3N-02181.WGS.N C3N-02181 GBM WGS blood_normal CPT0168430002 CPT0168430002.WholeGenome.RP-1303.bam 61662926101 BAM NA ddc57c40-b987-4ab8-abcd-3238e31dff72 689a11f1b546d7d392dbc89d22e43694 hg19 Blood Derived Normal C3N-02181.WGS.N.hg38 C3N-02181 GBM WGS blood_normal CPT0168430002 c1dac155-9fca-4217-893e-8b02a8e95dd4_wgs_gdc_realn.bam 90545302597 BAM NA cfde6003-aa52-42d0-b12c-ec711668f23b b681c09adbebb5d780462d6bd0858923 hg38 Blood Derived Normal C3N-02181.WGS.T C3N-02181 GBM WGS tumor CPT0168380006 CPT0168380006.WholeGenome.RP-1303.bam 63204082007 BAM NA f6710fcd-9939-4c1b-a321-ca7614e48ba2 1127701d6e4052f44a7149a0bec181f7 hg19 Primary Tumor @@ -24410,6 +24853,8 @@ C3N-02188.RNA-Seq.genomic.T.hg38 C3N-02188 GBM RNA-Seq tumor CPT0168830009 2c57c C3N-02188.RNA-Seq.R1.T C3N-02188 GBM RNA-Seq tumor CPT0168830009 180516_UNC31-K00269_0130_BHV22JBBXX_TAGCTT_S11_L003_R1_001.fastq.gz 4872445125 FASTQ NA 17b19efd-d99c-4431-8975-392be567d955 9d2801672dbdbfe292bc098e3354073c NA Primary Tumor C3N-02188.RNA-Seq.R2.T C3N-02188 GBM RNA-Seq tumor CPT0168830009 180516_UNC31-K00269_0130_BHV22JBBXX_TAGCTT_S11_L003_R2_001.fastq.gz 5271764250 FASTQ NA 9cec104e-e480-4804-a01e-4b3aa2e3b147 8859cf3be99c89e5266aa840c3115789 NA Primary Tumor C3N-02188.RNA-Seq.transcriptome.T.hg38 C3N-02188 GBM RNA-Seq tumor CPT0168830009 2c57cb9b-9996-4619-80eb-c66eefedca1e.rna_seq.transcriptome.gdc_realn.bam 12361598093 BAM transcriptome ca927751-b7ef-4ed5-8ede-d16fbed93314 785af1f753efee1760797cca6aab2805 hg38 Primary Tumor +C3N-02188.scRNA-Seq.R1.T C3N-02188 GBM scRNA-Seq tumor CPT0168830014 20200603_WUSTL_CPT0168830014_GCATCTCC-TGTAAGGT-CTGCGATG-AACGTCAA_S4_L004_R1_001.fastq.gz 7649283315 FASTQ NA d98e9606-3a55-41ce-a742-013daebff0da 29f2ede89bb12353aea6ac941037099b NA Primary Tumor +C3N-02188.scRNA-Seq.R2.T C3N-02188 GBM scRNA-Seq tumor CPT0168830014 20200603_WUSTL_CPT0168830014_GCATCTCC-TGTAAGGT-CTGCGATG-AACGTCAA_S4_L004_R2_001.fastq.gz 18359540278 FASTQ NA 60112146-2f56-4df0-ad7e-c8767a6b1e17 3f7c8199ffa5f7cf362f611be42a30ae NA Primary Tumor C3N-02188.WGS.N C3N-02188 GBM WGS blood_normal CPT0168870002 CPT0168870002.WholeGenome.RP-1303.bam 67438684582 BAM NA e7fae748-9aad-44b8-a676-87f91c3812be 4d310f44d7e587f6706f8d68be9dde0d hg19 Blood Derived Normal C3N-02188.WGS.N.hg38 C3N-02188 GBM WGS blood_normal CPT0168870002 ea611a56-b305-4dcc-9d4b-620f7ff6410a_wgs_gdc_realn.bam 99011112123 BAM NA 462ec60f-d9e1-4cca-91e6-6146d9e12243 885082e5643d4b0fd2febc01cb7b51e3 hg38 Blood Derived Normal C3N-02188.WGS.T C3N-02188 GBM WGS tumor CPT0168830006 CPT0168830006.WholeGenome.RP-1303.bam 59728142886 BAM NA e9940759-3543-4d50-ab47-566af6b808dd a47920aed823e5cdd8446d2388c011d3 hg19 Primary Tumor @@ -24829,10 +25274,13 @@ C3N-02256.WXS.T.hg38 C3N-02256 GBM WXS tumor CPT0182580006 24815b9c-b5a1-4855-b8 C3N-02259.MethArray.Green.T C3N-02259 GBM Methylation Array tumor CPT0244830006 204372030070_R02C01_Grn.idat 13677900 IDAT Green 9b67246b-9a1e-43e4-925e-368e44840d2b d0bfe6b625037c679504d229ebc943fe NA Primary Tumor C3N-02259.MethArray.Red.T C3N-02259 GBM Methylation Array tumor CPT0244830006 204372030070_R02C01_Red.idat 13677900 IDAT Red 6391abdd-786e-4c87-a3fb-afad3b1052ba 1b19c24d2316f9a21c80ff1fce9d0c4d NA Primary Tumor C3N-02259.miRNA-Seq.T C3N-02259 GBM miRNA-Seq tumor CPT0244830013 200513_UNC31-K00269_0278_BHH7Y7BBXY_CTCAGA_S40_L008_R1_001.unaln.bam 167476066 BAM NA aa27227b-33ff-4471-b8dd-1b0e68037e2b 11cfc1a989f3e0986ed2a0436c7808ff NA Primary Tumor +C3N-02259.miRNA-Seq.T.hg38 C3N-02259 GBM miRNA-Seq tumor CPT0244830013 2229bd80-e569-43c6-a683-c0b2b29de25d_mirnaseq_gdc_realn.bam 184461994 BAM NA 97c8d814-ca7e-4c7e-976e-ee8a45b06e39 57d5afcc2fae00d2c0fc72cc41159a99 hg38 Primary Tumor C3N-02259.RNA-Seq.R1.T C3N-02259 GBM RNA-Seq tumor CPT0244830013 200218_UNC31-K00269_0266_AHGKHKBBXY_AGGCAGAG-AGAATGCC_S67_L008_R1_001.fastq.gz 3685625755 FASTQ NA 611120e0-9d64-40e8-ad9f-7a7ae8092067 fea2f4e7d6e1c9406c7a22597c1b298e NA Primary Tumor C3N-02259.RNA-Seq.R2.T C3N-02259 GBM RNA-Seq tumor CPT0244830013 200218_UNC31-K00269_0266_AHGKHKBBXY_AGGCAGAG-AGAATGCC_S67_L008_R2_001.fastq.gz 3988346570 FASTQ NA 11e7d48b-1bfe-4892-8eca-6a22a1b8649a 6f5dee400ccd322466f6252db61a961c NA Primary Tumor C3N-02259.WGS.N C3N-02259 GBM WGS blood_normal CPT0244850002 CPT0244850002.WholeGenome.RP-2158.bam 22539611729 BAM NA 651f92d8-0c95-45bc-a251-3dabda9b9c3e fe9cbb6d65312b4df2c3020df2f1feac hg19 Blood Derived Normal +C3N-02259.WGS.N.hg38 C3N-02259 GBM WGS blood_normal CPT0244850002 6ba5ae6a-aa56-4806-b46b-c46b0169f107_wgs_gdc_realn.bam 65671654026 BAM NA 80bd2584-7377-4a12-b6e7-e6f329974607 12cb4b76e3a68660e5d8b249761f219a hg38 Blood Derived Normal C3N-02259.WGS.T C3N-02259 GBM WGS tumor CPT0244830006 CPT0244830006.WholeGenome.RP-2158.bam 22620549920 BAM NA ca024786-6ce2-4a4c-9f7d-c54c9d4221c2 3c2ede46a0b1c99900ad79edb284d398 hg19 Primary Tumor +C3N-02259.WGS.T.hg38 C3N-02259 GBM WGS tumor CPT0244830006 e14a46ba-704d-4e84-876e-46569248569c_wgs_gdc_realn.bam 67217998804 BAM NA 9ab46c4f-c4af-4fba-aa78-9a124221b6a3 53af72edb281dcebc00df3933c8c8aa9 hg38 Primary Tumor C3N-02259.WXS.N C3N-02259 GBM WXS blood_normal CPT0244850002 CPT0244850002.WholeExome.RP-1303.bam 23358305597 BAM NA 1eb497b2-eed1-45bb-b46b-a6963d996134 9573158a4ec44c1701a082532bde38a5 hg19 Blood Derived Normal C3N-02259.WXS.T C3N-02259 GBM WXS tumor CPT0244830006 CPT0244830006.WholeExome.RP-1303.bam 23855654353 BAM NA 71da1801-69f7-40c3-8e26-961f3326e2c0 def4887c4dd8f894577c3b6f7eea2639 hg19 Primary Tumor C3N-02262.MethArray.Green.T C3N-02262 CCRCC Methylation Array tumor CPT0188140011 203219640102_R08C01_Grn.idat 13676221 IDAT Green c1f7eae6-a82a-46f4-9d4b-997a103bbffb 41b347a576e31d3981eab87b11a2bb4e NA Primary Tumor @@ -25147,10 +25595,13 @@ C3N-02285.WXS.T.hg38 C3N-02285 LSCC WXS tumor CPT0126740006 bc40d70a-933b-4fab-8 C3N-02286.MethArray.Green.T C3N-02286 GBM Methylation Array tumor CPT0244760006 204367490066_R02C01_Grn.idat 13677900 IDAT Green 9448d075-581c-4431-930a-0babf71cb6b9 44c3c81ff45a6c4494d103e377888858 NA Primary Tumor C3N-02286.MethArray.Red.T C3N-02286 GBM Methylation Array tumor CPT0244760006 204367490066_R02C01_Red.idat 13677900 IDAT Red 8fd80be3-698a-4666-ae92-d05ef75f53e3 0d34990fc116078631487b743076d295 NA Primary Tumor C3N-02286.miRNA-Seq.T C3N-02286 GBM miRNA-Seq tumor CPT0244760012 200513_UNC31-K00269_0278_BHH7Y7BBXY_CTATAC_S39_L008_R1_001.unaln.bam 194637823 BAM NA ae5b5cc2-88f4-4583-966d-adb6dea6c265 325c6af91a3cebd3a17591305f10d080 NA Primary Tumor +C3N-02286.miRNA-Seq.T.hg38 C3N-02286 GBM miRNA-Seq tumor CPT0244760012 89e53779-3952-48e8-96f5-c8cf72c56aef_mirnaseq_gdc_realn.bam 215338304 BAM NA 159b1364-2268-4c9e-81b2-82fcd8cd2b33 93cbddfcba5c9007fd381dec7ed2c240 hg38 Primary Tumor C3N-02286.RNA-Seq.R1.T C3N-02286 GBM RNA-Seq tumor CPT0244760012 200218_UNC31-K00269_0266_AHGKHKBBXY_TGGTGGCA-TCCTGTAA_S66_L008_R1_001.fastq.gz 3685174247 FASTQ NA 02665bb1-0f40-4959-9017-1d20d7a15ced f7102e43015cf6a94651d4512fef2730 NA Primary Tumor C3N-02286.RNA-Seq.R2.T C3N-02286 GBM RNA-Seq tumor CPT0244760012 200218_UNC31-K00269_0266_AHGKHKBBXY_TGGTGGCA-TCCTGTAA_S66_L008_R2_001.fastq.gz 3994468657 FASTQ NA 80bdd1ba-fe88-4d31-b371-bd54b3859722 25ea3c33b8850b377fba3165b009e7bd NA Primary Tumor C3N-02286.WGS.N C3N-02286 GBM WGS blood_normal CPT0244820002 CPT0244820002.WholeGenome.RP-2158.bam 25059198039 BAM NA 207b0c66-831f-4fc7-9714-7b9dbc6d286c c51cbf0a58951b20781e066b7f7120f4 hg19 Blood Derived Normal +C3N-02286.WGS.N.hg38 C3N-02286 GBM WGS blood_normal CPT0244820002 ea28074f-12a6-43b9-adaa-ce7c5cd4902b_wgs_gdc_realn.bam 77117048003 BAM NA 049469de-687c-4e38-bddb-a16aabc783b1 f2731f07a3012f2cd71dda55bcaa1e69 hg38 Blood Derived Normal C3N-02286.WGS.T C3N-02286 GBM WGS tumor CPT0244760006 CPT0244760006.WholeGenome.RP-2158.bam 27211004051 BAM NA 5d4e1b94-0bc1-483b-8d13-f163e3aa239c 6e9f41309d1adfc35c4c07d9a3aee9f0 hg19 Primary Tumor +C3N-02286.WGS.T.hg38 C3N-02286 GBM WGS tumor CPT0244760006 4c7b90aa-659d-4e89-b2ef-f72998b5a9fc_wgs_gdc_realn.bam 80364977264 BAM NA 513c7439-2b46-4105-ae68-efcee2cdddaf 1ce8ee7be637603ee5a2d23917caf575 hg38 Primary Tumor C3N-02286.WXS.N C3N-02286 GBM WXS blood_normal CPT0244820002 CPT0244820002.WholeExome.RP-1303.bam 24861070255 BAM NA fb4d5bbb-2ccc-4536-8810-5b8c26966cc4 0246bff93c17589ea8c8666f3eab8af6 hg19 Blood Derived Normal C3N-02286.WXS.T C3N-02286 GBM WXS tumor CPT0244760006 CPT0244760006.WholeExome.RP-1303.bam 22922615721 BAM NA eda81041-c710-4a34-820b-0ac80720e269 c29266412aaa7d5ae57db800e304ea49 hg19 Primary Tumor C3N-02288.MethArray.Green.A C3N-02288 LSCC Methylation Array tissue_normal CPT0186140009 203219720203_R01C01_Grn.idat 13676221 IDAT Green 2a8a3e31-31b6-4e2e-8056-a1df8856353a 1a3d60ea4f31422ab180049a056a0895 NA Solid Tissue Normal @@ -26461,10 +26912,13 @@ C3N-02598.WXS.T.hg38 C3N-02598 UCEC WXS tumor CPT0187960007 12bf4120-7e3c-48d9-b C3N-02599.MethArray.Green.T C3N-02599 GBM Methylation Array tumor CPT0224840006 204367460011_R03C01_Grn.idat 13677880 IDAT Green d0b9db37-e1db-4963-87ab-470d2382b585 4462c0256ba0a8f92a957597b6ee3b91 NA Primary Tumor C3N-02599.MethArray.Red.T C3N-02599 GBM Methylation Array tumor CPT0224840006 204367460011_R03C01_Red.idat 13677880 IDAT Red f4746f63-04f0-447a-90d5-fe95160b61e4 081bd120d47a555981eefcdbbf2d9298 NA Primary Tumor C3N-02599.miRNA-Seq.T C3N-02599 GBM miRNA-Seq tumor CPT0224840013 200403_UNC31-K00269_0274_AHCF7GBBXY_TCGGCA_S24_L001_R1_001.unaln.bam 195500706 BAM NA e6e5d26d-2f56-46ab-9d8c-e0b5cb2ffd62 6a2878c6f2c3fc8cf621644a76e9ca2e NA Primary Tumor +C3N-02599.miRNA-Seq.T.hg38 C3N-02599 GBM miRNA-Seq tumor CPT0224840013 ec6c6d0e-2b20-4ad9-9cb1-5c7e7fc03453_mirnaseq_gdc_realn.bam 216716399 BAM NA f8ddc7c6-3319-4b1a-b72d-53c3dd86f395 fc350138b7593157d216570b8fcebdf3 hg38 Primary Tumor C3N-02599.RNA-Seq.R1.T C3N-02599 GBM RNA-Seq tumor CPT0224840013 200212_UNC31-K00269_0265_BHGCWGBBXY_ACCTTGGC-GGCCTCAT_S19_L005_R1_001.fastq.gz 3286785831 FASTQ NA 48cfa054-e4e7-4707-8f4f-1464920cd330 183c5e235a9c00136eb7a9ac4b449744 NA Primary Tumor C3N-02599.RNA-Seq.R2.T C3N-02599 GBM RNA-Seq tumor CPT0224840013 200212_UNC31-K00269_0265_BHGCWGBBXY_ACCTTGGC-GGCCTCAT_S19_L005_R2_001.fastq.gz 3639513940 FASTQ NA f34ce994-d55e-49cb-bb17-93e3a4874810 435d813baa812c7764a77ba5509cf851 NA Primary Tumor C3N-02599.WGS.N C3N-02599 GBM WGS blood_normal CPT0224860002 CPT0224860002.WholeGenome.RP-2158.bam 24996003121 BAM NA 474416f9-0b17-4e8b-8ebc-f81fbc3f399b 0ee5ef3b4fc3c1daeb44c0036180d6b3 hg19 Blood Derived Normal +C3N-02599.WGS.N.hg38 C3N-02599 GBM WGS blood_normal CPT0224860002 834e776f-c515-46ba-b94e-ae7afe7663ea_wgs_gdc_realn.bam 74853169740 BAM NA 68d465da-3999-4a59-8573-fe84d4170d38 53095a2d5416d2e7c9cfce94f52df618 hg38 Blood Derived Normal C3N-02599.WGS.T C3N-02599 GBM WGS tumor CPT0224840006 CPT0224840006.WholeGenome.RP-2158.bam 23281634761 BAM NA 632b83d0-1085-4038-a036-946722d426e8 4387845b184a7920ef67383b6b8ba58f hg19 Primary Tumor +C3N-02599.WGS.T.hg38 C3N-02599 GBM WGS tumor CPT0224840006 2be12cc8-a8a1-4c9f-bca4-ad8bca36aeb6_wgs_gdc_realn.bam 65754798136 BAM NA 1b532f93-73c6-4ace-b9fc-2ac02ba09301 9902bf5f8545c6e5b737b96a420f94c7 hg38 Primary Tumor C3N-02599.WXS.N C3N-02599 GBM WXS blood_normal CPT0224860002 CPT0224860002.WholeExome.RP-1303.bam 26628614397 BAM NA 80e2e08c-f3ed-42f1-bbd8-5b5a5e21986f 10a323162cb7e3f24d72183e163f493b hg19 Blood Derived Normal C3N-02599.WXS.T C3N-02599 GBM WXS tumor CPT0224840006 CPT0224840006.WholeExome.RP-1303.bam 20153296974 BAM NA 15239510-48e4-45b0-9dd0-e37ea89ff0fd 0a312e533d0d71ee50f32494955b6e99 hg19 Primary Tumor C3N-02631.MethArray.Green.T C3N-02631 UCEC Methylation Array tumor CPT0181960007 203561450030_R05C01_Grn.idat 13676216 IDAT Green 1086a9a9-0c3a-4553-9c5c-ef4c651c4b4d 8c4ca0c62ffbe2e052dc2ae9c0b72307 NA Primary Tumor @@ -26648,23 +27102,31 @@ C3N-02681.miRNA-Seq.T C3N-02681 GBM miRNA-Seq tumor CPT0224870009 200526_UNC32-K C3N-02681.RNA-Seq.R1.T C3N-02681 GBM RNA-Seq tumor CPT0224870009 200204_UNC31-K00269_0263_AHG2CJBBXY_CGGCGTGA-GCGCCTGT_S10_L003_R1_001.fastq.gz 3315991757 FASTQ NA a9a4c580-e93e-4331-bcd2-26bd9f24d024 2ae78b19896ae2a06ee16e04f7e27cfc NA Primary Tumor C3N-02681.RNA-Seq.R2.T C3N-02681 GBM RNA-Seq tumor CPT0224870009 200204_UNC31-K00269_0263_AHG2CJBBXY_CGGCGTGA-GCGCCTGT_S10_L003_R2_001.fastq.gz 3893705915 FASTQ NA 17f81101-60cd-4f3f-905c-776206e75ed1 a5fd48e9b39ba8a15d982a7792fd8a7f NA Primary Tumor C3N-02681.WGS.N C3N-02681 GBM WGS blood_normal CPT0224890002 CPT0224890002.WholeGenome.RP-2158.bam 29513597556 BAM NA 84be52db-65d0-4a40-9707-a7a31938a2b4 93f2092af659e9b5eb036575744cb5c2 hg19 Blood Derived Normal +C3N-02681.WGS.N.hg38 C3N-02681 GBM WGS blood_normal CPT0224890002 64828d5e-4e40-4ea2-a5ac-8e3c4fd5b345_wgs_gdc_realn.bam 87927682035 BAM NA fc1f6717-d9aa-4711-a859-63dfbebbb225 3d99d1e398ddca1e01cdff813d131f15 hg38 Blood Derived Normal C3N-02681.WGS.T C3N-02681 GBM WGS tumor CPT0224870006 CPT0224870006.WholeGenome.RP-2158.bam 21588349176 BAM NA d6e95ce9-5c17-42a4-ad5f-7fd62229b2f8 ab991cc28e94d545e479809fe357300d hg19 Primary Tumor +C3N-02681.WGS.T.hg38 C3N-02681 GBM WGS tumor CPT0224870006 f5e8abfa-80d2-4a3c-9472-15c2b8d614d3_wgs_gdc_realn.bam 62459496300 BAM NA fd143d44-a8c3-4f15-93c8-df50ef08f406 886b39eb57570f802e1c927f3da5047c hg38 Primary Tumor C3N-02681.WXS.N C3N-02681 GBM WXS blood_normal CPT0224890002 CPT0224890002.WholeExome.RP-1303.bam 22672044861 BAM NA 9e3323b4-5822-4ae6-b67d-5fd328904d51 4d7facbd49077c4d3c279f4ed29bea87 hg19 Blood Derived Normal C3N-02681.WXS.T C3N-02681 GBM WXS tumor CPT0224870006 CPT0224870006.WholeExome.RP-1303.bam 21755322913 BAM NA 21f33ee6-8a02-4c89-ad5f-1236f2b1b8d0 6cd94102ff26545973129ea9c47c3909 hg19 Primary Tumor C3N-02682.miRNA-Seq.T C3N-02682 GBM miRNA-Seq tumor CPT0224900009 200403_UNC31-K00269_0274_AHCF7GBBXY_GTGAAA_S43_L002_R1_001.unaln.bam 222592560 BAM NA 9d01dc24-eb15-4c28-bba9-f04775a98168 c8c95be2aeaa145208f2c8fcabbac0e6 NA Primary Tumor +C3N-02682.miRNA-Seq.T.hg38 C3N-02682 GBM miRNA-Seq tumor CPT0224900009 034ae2ee-d3f8-4256-83c1-089148361759_mirnaseq_gdc_realn.bam 252734628 BAM NA 0023dbf5-2b24-4578-9392-180ffe74a898 ed455efe281b1dc88e85725f4bae72e3 hg38 Primary Tumor C3N-02682.RNA-Seq.R1.T C3N-02682 GBM RNA-Seq tumor CPT0224900009 200204_UNC31-K00269_0263_AHG2CJBBXY_ATGTAAGT-ACTCTATG_S11_L003_R1_001.fastq.gz 3870461768 FASTQ NA bdabb589-3cd2-4b0d-9710-b951fc336806 78f770e27956e9ee283579768c74539a NA Primary Tumor C3N-02682.RNA-Seq.R2.T C3N-02682 GBM RNA-Seq tumor CPT0224900009 200204_UNC31-K00269_0263_AHG2CJBBXY_ATGTAAGT-ACTCTATG_S11_L003_R2_001.fastq.gz 4641618871 FASTQ NA c36b01fb-a764-4899-8eaa-7df412ad8c7b c0535dc8e09ca2e6d179e20623f904c7 NA Primary Tumor C3N-02682.WGS.N C3N-02682 GBM WGS blood_normal CPT0224920002 CPT0224920002.WholeGenome.RP-2158.bam 24539748739 BAM NA f0ea8630-6e1c-4904-98a2-7c2772da1ed7 d6ef5422ce8df34f3748fb80f26ff7f2 hg19 Blood Derived Normal +C3N-02682.WGS.N.hg38 C3N-02682 GBM WGS blood_normal CPT0224920002 5854cf9a-665a-48c0-a765-43727b62ae6d_wgs_gdc_realn.bam 73004266622 BAM NA 2771f873-7104-4a2f-a186-ee4634ea8b5d 44a5e33f364c39b44562c6f1f5b11f09 hg38 Blood Derived Normal C3N-02682.WGS.T C3N-02682 GBM WGS tumor CPT0224900006 CPT0224900006.WholeGenome.RP-2158.bam 27140589506 BAM NA d07b3f98-fbba-4f88-8cd4-05b6b60fa2f4 6a97998c8531c2a5ed5a647cf81968ae hg19 Primary Tumor +C3N-02682.WGS.T.hg38 C3N-02682 GBM WGS tumor CPT0224900006 a96f6a16-6c6d-446b-8545-571072fd312a_wgs_gdc_realn.bam 79473733003 BAM NA b805c3d4-0636-483f-ab8b-747e130cafff 7eba790a20b43755d7d3826c23645ebd hg38 Primary Tumor C3N-02682.WXS.N C3N-02682 GBM WXS blood_normal CPT0224920002 CPT0224920002.WholeExome.RP-1303.bam 32308755616 BAM NA a49f2a7e-630a-4dc6-b2d6-b1ae75d1e82b 4d33649ec2d27be1d079e68fdf3f11a0 hg19 Blood Derived Normal C3N-02682.WXS.T C3N-02682 GBM WXS tumor CPT0224900006 CPT0224900006.WholeExome.RP-1303.bam 31079844576 BAM NA 685fc795-d8a6-44db-9946-6abf67a1ea35 72d889c25439e208ad03686616c09de8 hg19 Primary Tumor C3N-02683.MethArray.Green.T C3N-02683 GBM Methylation Array tumor CPT0224930006 204372030079_R02C01_Grn.idat 13677880 IDAT Green 0a9b2e20-870b-4a66-ab2f-051e2d554f25 529532979907946bd930507c78f56c38 NA Primary Tumor C3N-02683.MethArray.Red.T C3N-02683 GBM Methylation Array tumor CPT0224930006 204372030079_R02C01_Red.idat 13677880 IDAT Red 5eedf5aa-57e1-4eda-adfd-8dd190a63470 60cc441b70054e307b51500d9dc95f13 NA Primary Tumor C3N-02683.miRNA-Seq.T C3N-02683 GBM miRNA-Seq tumor CPT0224930012 200403_UNC31-K00269_0274_AHCF7GBBXY_CGATGT_S26_L002_R1_001.unaln.bam 268795788 BAM NA 9f8c1f79-ac2c-4c9d-91ed-e1300d7c4b0d 179656880a8390577376203eaa89970f NA Primary Tumor +C3N-02683.miRNA-Seq.T.hg38 C3N-02683 GBM miRNA-Seq tumor CPT0224930012 2cbef5f3-3bc6-474b-942b-4d9928326d28_mirnaseq_gdc_realn.bam 298296964 BAM NA 86cb8c5b-f827-4c92-a8ab-fef3d90b8eb3 7ca60f32150713f61f82dbd3444c7e63 hg38 Primary Tumor C3N-02683.RNA-Seq.R1.T C3N-02683 GBM RNA-Seq tumor CPT0224930012 200129_UNC31-K00269_0261_AHG2CLBBXY_TTATAACC-GATATCGA_S6_L007_R1_001.fastq.gz 4370856638 FASTQ NA f88b71c6-807d-45d8-bb45-d6f1adb722e4 1c21125d789e0e7af18a6e61b0ddcdc4 NA Primary Tumor C3N-02683.RNA-Seq.R2.T C3N-02683 GBM RNA-Seq tumor CPT0224930012 200129_UNC31-K00269_0261_AHG2CLBBXY_TTATAACC-GATATCGA_S6_L007_R2_001.fastq.gz 4456238893 FASTQ NA 86f73dc2-f0b2-4857-9873-09673863a96a 82e5a3f4dec70d062ff644403fcbbb17 NA Primary Tumor C3N-02683.WGS.N C3N-02683 GBM WGS blood_normal CPT0224950002 CPT0224950002.WholeGenome.RP-2158.bam 22007412977 BAM NA 2d2be077-64ee-4be0-934e-ffa2f0c44fb0 d1b0a28f94567a0db7f69734383b86a3 hg19 Blood Derived Normal +C3N-02683.WGS.N.hg38 C3N-02683 GBM WGS blood_normal CPT0224950002 63e86eb1-34a0-4930-ab71-1e80bca277ed_wgs_gdc_realn.bam 67714893079 BAM NA 61819705-e22c-4d38-9cac-3d53f1d640fa 7f668186c3bb0669ea0983536e887320 hg38 Blood Derived Normal C3N-02683.WGS.T C3N-02683 GBM WGS tumor CPT0224930006 CPT0224930006.WholeGenome.RP-2158.bam 20774991918 BAM NA 6eced862-2a89-414c-bc4b-7c0d197bbe49 fec26ca396989f5f58b0a01727584459 hg19 Primary Tumor +C3N-02683.WGS.T.hg38 C3N-02683 GBM WGS tumor CPT0224930006 17fb3ecc-d825-4e43-a854-3494772f2488_wgs_gdc_realn.bam 60609807639 BAM NA 126f97d8-c3e5-4676-87e4-f0e71791a784 3e1782efc49d7d08e618a62646c5dd60 hg38 Primary Tumor C3N-02683.WXS.N C3N-02683 GBM WXS blood_normal CPT0224950002 CPT0224950002.WholeExome.RP-1303.bam 17787837151 BAM NA 592cfbb3-28f9-49a9-832f-b583e604e6c6 2476b0e86b220678fbcc721bce06a5db hg19 Blood Derived Normal C3N-02683.WXS.T C3N-02683 GBM WXS tumor CPT0224930006 CPT0224930006.WholeExome.RP-1303.bam 19826009056 BAM NA 361c9812-014e-44d2-9ecd-453e0f9f99f8 5efb2348fd07a3c61b3aaa6aacb65e68 hg19 Primary Tumor C3N-02688.MethArray.Green.A C3N-02688 LSCC Methylation Array tissue_normal CPT0312920006 204372030076_R04C01_Grn.idat 13677890 IDAT Green a1dad805-ac26-4af1-b7ca-571ad271f815 fa6bc94b4d886d9586c275922ca69d9a NA Solid Tissue Normal @@ -26672,13 +27134,17 @@ C3N-02688.MethArray.Green.T C3N-02688 LSCC Methylation Array tumor CPT0312910006 C3N-02688.MethArray.Red.A C3N-02688 LSCC Methylation Array tissue_normal CPT0312920006 204372030076_R04C01_Red.idat 13677890 IDAT Red 15b2c74b-dba2-43b6-b7e2-c578b5eddd7a 000326a874f6e98624bcf4f989dd4314 NA Solid Tissue Normal C3N-02688.MethArray.Red.T C3N-02688 LSCC Methylation Array tumor CPT0312910006 204372030127_R04C01_Red.idat 13677880 IDAT Red b585a793-5c65-47dc-a86c-3176ef9ee4ad 4698900170d044183f87d2a2804fd484 NA Primary Tumor C3N-02688.miRNA-Seq.A C3N-02688 LSCC miRNA-Seq tissue_normal CPT0312920009 200513_UNC31-K00269_0278_BHH7Y7BBXY_ATCACG_S5_L005_R1_001.unaln.bam 222260978 BAM NA 86615d19-d945-4322-9f2e-f47e81401fe1 5a71a4279e6b7133f676e49d8c584593 NA Solid Tissue Normal +C3N-02688.miRNA-Seq.A.hg38 C3N-02688 LSCC miRNA-Seq tissue_normal CPT0312920009 d00920ca-4e46-4bb0-aded-5cf69517f27b_mirnaseq_gdc_realn.bam 250886309 BAM NA ebae80d1-2c0b-4b88-8d5f-86c7f31cca8d 3033fc7007bb7a107c51a59fe8e525d8 hg38 Solid Tissue Normal C3N-02688.miRNA-Seq.T C3N-02688 LSCC miRNA-Seq tumor CPT0312910009 200224_UNC31-K00269_0267_AHC722BBXY_GGCTAC_S11_L008_R1_001.unaln.bam 236071444 BAM NA 235f3879-e620-4693-98e6-2730194e2016 be6a0437c6c74509e07d2ba39ea917fc NA Primary Tumor +C3N-02688.miRNA-Seq.T.hg38 C3N-02688 LSCC miRNA-Seq tumor CPT0312910009 caa1123b-8a05-4c0c-8a63-f29f2348ba74_mirnaseq_gdc_realn.bam 261205317 BAM NA 8846dcfd-79ea-4a17-bed3-85a2209cb2da 13bfdeb615c1f2b3ce1fbefc8e625530 hg38 Primary Tumor C3N-02688.RNA-Seq.R1.A C3N-02688 LSCC RNA-Seq tissue_normal CPT0312920009 200505_UNC32-K00270_0245_AHH5FVBBXY_CCGCGGTT-AGCGCTAG_S1_L005_R1_001.fastq.gz 5068314421 FASTQ NA c7fc7a30-bc1e-4548-9c65-b57f1ccbc2f8 4698785e852794e60bbd246691f278ef NA Solid Tissue Normal C3N-02688.RNA-Seq.R1.T C3N-02688 LSCC RNA-Seq tumor CPT0312910009 200505_UNC32-K00270_0245_AHH5FVBBXY_TCTCTACT-CGCGGTTC_S11_L003_R1_001.fastq.gz 3631020778 FASTQ NA c124c4a7-51e6-488f-a793-61b93eb0e118 a2fd520856f22ad7e887edefcfd5b979 NA Primary Tumor C3N-02688.RNA-Seq.R2.A C3N-02688 LSCC RNA-Seq tissue_normal CPT0312920009 200505_UNC32-K00270_0245_AHH5FVBBXY_CCGCGGTT-AGCGCTAG_S1_L005_R2_001.fastq.gz 5446340967 FASTQ NA a753ba88-e961-4f03-ae0d-9ebc591fb1d3 e162e5125a60d6d9aa9203a83a04721a NA Solid Tissue Normal C3N-02688.RNA-Seq.R2.T C3N-02688 LSCC RNA-Seq tumor CPT0312910009 200505_UNC32-K00270_0245_AHH5FVBBXY_TCTCTACT-CGCGGTTC_S11_L003_R2_001.fastq.gz 3918387827 FASTQ NA 1d7a49f1-cb96-4a37-8507-0447f00fd37f 3a8e78eab80321592656a81aa7687fd6 NA Primary Tumor C3N-02688.WGS.N C3N-02688 LSCC WGS blood_normal CPT0312930002 CPT0312930002.WholeGenome.RP-2158.bam 24879180435 BAM NA 19002fae-edee-4df2-90de-0f70b92d726d e00c75b0586af3b9e715e34583848336 hg19 Blood Derived Normal +C3N-02688.WGS.N.hg38 C3N-02688 LSCC WGS blood_normal CPT0312930002 7cd60c64-ed69-43e0-84e6-b067c3a17c7b_wgs_gdc_realn.bam 73583032406 BAM NA 3874521a-91da-4fe6-aa99-5c5a25f74594 92d8df89072bbfe4381076b05b490fb1 hg38 Blood Derived Normal C3N-02688.WGS.T C3N-02688 LSCC WGS tumor CPT0312910006 CPT0312910006.WholeGenome.RP-2158.bam 25085524970 BAM NA 9915a0e2-3020-4e79-9fc2-ad6176c13c71 a791db082febbf86d9eb63f941ec7e1d hg19 Primary Tumor +C3N-02688.WGS.T.hg38 C3N-02688 LSCC WGS tumor CPT0312910006 841db2f4-f7e1-4d01-aba1-5f75df188097_wgs_gdc_realn.bam 70440118470 BAM NA d3f651cf-a358-4262-bc5f-f8e85dd223ab ca0833137ccb711b6ab96585844b2afb hg38 Primary Tumor C3N-02688.WXS.A C3N-02688 LSCC WXS tissue_normal CPT0312920006 CPT0312920006.WholeExome.RP-1303.bam 27906892479 BAM NA df121a2e-5197-4217-9bb7-ef46625c005e 9fedf0f3d44a9e68796d9e930bd703ec hg19 Solid Tissue Normal C3N-02688.WXS.N C3N-02688 LSCC WXS blood_normal CPT0312930002 CPT0312930002.WholeExome.RP-1303.bam 28283144336 BAM NA 06808e58-a880-4754-9b27-fa25f072e2df 1ff8dd6db4a102baef15adc87e0b1c1e hg19 Blood Derived Normal C3N-02688.WXS.T C3N-02688 LSCC WXS tumor CPT0312910006 CPT0312910006.WholeExome.RP-1303.bam 18877226352 BAM NA b9dacedb-73c3-454d-87c3-3fde9edc21de 741ec32ebc4f90ac0ae7c21756e18bb4 hg19 Primary Tumor @@ -27000,6 +27466,7 @@ C3N-02727.RNA-Seq.transcriptome.A.hg38 C3N-02727 HNSCC RNA-Seq tissue_normal CPT C3N-02727.RNA-Seq.transcriptome.T.hg38 C3N-02727 HNSCC RNA-Seq tumor CPT0177710009 1d54241e-451a-4467-8230-a1cf89751b93.rna_seq.transcriptome.gdc_realn.bam 9762173268 BAM transcriptome bce8fad5-6689-4e1f-9bb3-1b9e6cfb52b6 d09bcf3bdbdb250ca140d3d46a1d479c hg38 Primary Tumor C3N-02727.RNA-Seq.transcriptome.T.hg38.deprecated C3N-02727 HNSCC RNA-Seq tumor CPT0177700009 4d0ad197-a619-4fec-9e05-9a0934115c4b.rna_seq.transcriptome.gdc_realn.bam 8851504992 BAM transcriptome 47ce918f-1cf9-40b8-823e-86a62f856abe 816c79b88bfc0e435d1127a645f18786 hg38 Primary Tumor C3N-02727.WGS.N C3N-02727 HNSCC WGS blood_normal CPT0177820002 CPT0177820002.WholeGenome.RP-1303.bam 65291598979 BAM NA 53d35c55-274d-4b75-97ee-90d349df4a51 b6118756ad07057051ccf999a3d11559 hg19 Blood Derived Normal +C3N-02727.WGS.N.hg38 C3N-02727 HNSCC WGS blood_normal CPT0177820002 e4e0a7a8-7b08-4410-85c6-b9bf8e6741ad_wgs_gdc_realn.bam 96179092735 BAM NA 534a92c0-65c8-4e42-a3bb-b673c4c0c952 a0b1049cb5497da327de4b35b0f30c7d hg38 Blood Derived Normal C3N-02727.WGS.T C3N-02727 HNSCC WGS tumor CPT0177710006 CPT0177710006.WholeGenome.RP-1303.bam 65160624693 BAM NA 99a35606-a3ff-481f-835c-15c535b5a25e 397ab5f82f009505232906d591b03216 hg19 Primary Tumor C3N-02727.WGS.T.hg38 C3N-02727 HNSCC WGS tumor CPT0177710006 7d212c59-d44b-4209-baa1-4cc11d663cde_wgs_gdc_realn.bam 94309626912 BAM NA 6f023d6b-28c0-4dcf-aab9-67cc3da1bc46 42615a1df46446e70dd99d877cd17ccf hg38 Primary Tumor C3N-02727.WXS.A C3N-02727 HNSCC WXS tissue_normal CPT0177730006 CPT0177730006.WholeExome.RP-1303.bam 45036632991 BAM NA cb63efb7-a3b1-457a-8e58-3875466072b6 2e9edd006076f15a546a6586d50270fe hg19 Solid Tissue Normal @@ -27240,6 +27707,8 @@ C3N-02769.RNA-Seq.genomic.T.hg38 C3N-02769 GBM RNA-Seq tumor CPT0205570006 cbdd0 C3N-02769.RNA-Seq.R1.T C3N-02769 GBM RNA-Seq tumor CPT0205570006 181002_UNC31-K00269_0156_AHWN3HBBXX_GAGTGG_S32_L007_R1_001.fastq.gz 3703368298 FASTQ NA cbcec998-f2ef-4566-bf1d-1ba58e3ec41b d3d55f7bd4c11dda8c93673bf83786fc NA Primary Tumor C3N-02769.RNA-Seq.R2.T C3N-02769 GBM RNA-Seq tumor CPT0205570006 181002_UNC31-K00269_0156_AHWN3HBBXX_GAGTGG_S32_L007_R2_001.fastq.gz 3963422980 FASTQ NA 40725a01-9dfe-4cc9-b8fd-93e06c474763 4d1b77109b9e88659ce092f3169e6a69 NA Primary Tumor C3N-02769.RNA-Seq.transcriptome.T.hg38 C3N-02769 GBM RNA-Seq tumor CPT0205570006 cbdd0de2-aa21-47e8-b052-b84f5764e9b3.rna_seq.transcriptome.gdc_realn.bam 9462125706 BAM transcriptome 3c073706-b790-4325-be6e-65c1234ba58e c64c48e0368d093bb70c5e1b920c1ecf hg38 Primary Tumor +C3N-02769.scRNA-Seq.R1.T C3N-02769 GBM scRNA-Seq tumor CPT0205570014 20200615_WUSTL_CPT0205570014_AATAATGG-CCAGGGCA-TGCCTCAT-GTGTCATC_S1_L003_R1_001.fastq.gz 11929454541 FASTQ NA 2f89a031-595d-48dd-9a51-370d57ac9c6e ff970a9e16d1f4cb6d91cf1c78a439bc NA Primary Tumor +C3N-02769.scRNA-Seq.R2.T C3N-02769 GBM scRNA-Seq tumor CPT0205570014 20200615_WUSTL_CPT0205570014_AATAATGG-CCAGGGCA-TGCCTCAT-GTGTCATC_S1_L003_R2_001.fastq.gz 27196649078 FASTQ NA cba6562b-14a2-4f4c-b4be-0777a59e6481 ab57afb2890b2999b9cb429b48cefac9 NA Primary Tumor C3N-02769.WGS.N C3N-02769 GBM WGS blood_normal CPT0205620002 CPT0205620002.WholeGenome.RP-1303.bam 64625748534 BAM NA 86e332dd-384a-40f4-b6a1-691c9df72b2f 6a6c7a419bd96bb50105963b763d9bc7 hg19 Blood Derived Normal C3N-02769.WGS.N.hg38 C3N-02769 GBM WGS blood_normal CPT0205620002 676c0ccc-0273-4827-8d9a-4bf5e7af912c_wgs_gdc_realn.bam 93747243868 BAM NA 4c86fc2d-d1dc-44e3-8a3f-a6c8a0ec4811 f5e5e4542f87e7bef7fdd56270052ac1 hg38 Blood Derived Normal C3N-02769.WGS.T C3N-02769 GBM WGS tumor CPT0205570009 CPT0205570009.WholeGenome.RP-1303.bam 64787894653 BAM NA fddbda1a-4f41-40b3-aabf-b0c117753fa1 d99292496ec8a1787fdc8f0e36a2adba hg19 Primary Tumor @@ -27311,6 +27780,8 @@ C3N-02784.RNA-Seq.genomic.T.hg38 C3N-02784 GBM RNA-Seq tumor CPT0206000010 7aea8 C3N-02784.RNA-Seq.R1.T C3N-02784 GBM RNA-Seq tumor CPT0206000010 180918_UNC31-K00269_0152_AHWNJTBBXX_ACAGTG_S3_L005_R1_001.fastq.gz 3693628695 FASTQ NA 94f26cd4-ffba-4908-ba59-695a852622d4 3469606b893c3f594e563bbabb0b5c2e NA Primary Tumor C3N-02784.RNA-Seq.R2.T C3N-02784 GBM RNA-Seq tumor CPT0206000010 180918_UNC31-K00269_0152_AHWNJTBBXX_ACAGTG_S3_L005_R2_001.fastq.gz 3845497765 FASTQ NA e0b6edbc-145e-4aed-b3c0-64db111763c2 a1cca1ee5f0197d07d8c95b2f70e5987 NA Primary Tumor C3N-02784.RNA-Seq.transcriptome.T.hg38 C3N-02784 GBM RNA-Seq tumor CPT0206000010 7aea8bbf-ffc6-4c96-a47a-86b152df4b3d.rna_seq.transcriptome.gdc_realn.bam 10291313626 BAM transcriptome 263e4b47-292c-4ce0-ab64-3aae463910a4 c20b179ccacf27b955034965627a0aaa hg38 Primary Tumor +C3N-02784.scRNA-Seq.R1.T C3N-02784 GBM scRNA-Seq tumor CPT0206000015 20200610_WUSTL_CPT0206000015_TACTCTTC-CCTGTGCG-GGACACGT-ATGAGAAA_S5_L003_R1_001.fastq.gz 10247839581 FASTQ NA 82f470cd-a7c4-46dd-ad24-f6ef6ac2fb1f 5be38469d5926812ffec926b76323ee0 NA Primary Tumor +C3N-02784.scRNA-Seq.R2.T C3N-02784 GBM scRNA-Seq tumor CPT0206000015 20200610_WUSTL_CPT0206000015_TACTCTTC-CCTGTGCG-GGACACGT-ATGAGAAA_S5_L003_R2_001.fastq.gz 24870065483 FASTQ NA 51ff95f6-0a5c-495d-b26c-10cf4f66e95f ed342986a988a6bb271887bd53cadbb4 NA Primary Tumor C3N-02784.WGS.N C3N-02784 GBM WGS blood_normal CPT0206060002 CPT0206060002.WholeGenome.RP-1303.bam 59440566323 BAM NA 31df1c04-e901-4b2d-ad1e-19f9f7f6589d ae32b9769b0b50daa23eb6e2ff1b3c43 hg19 Blood Derived Normal C3N-02784.WGS.N.hg38 C3N-02784 GBM WGS blood_normal CPT0206060002 7c5eb1a4-b218-4654-9c46-76f044f69aee_wgs_gdc_realn.bam 86077990346 BAM NA acc13c17-4844-4ecd-88bd-a087db0726d9 c5e0df33a15c810f5d74aa4f213cef14 hg38 Blood Derived Normal C3N-02784.WGS.T C3N-02784 GBM WGS tumor CPT0206000007 CPT0206000007.WholeGenome.RP-1303.bam 57951905117 BAM NA 798426df-aa4e-405b-b0df-168c71d52d00 a5b62bcfeb86fa59d1bfc52121ee7c45 hg19 Primary Tumor @@ -28046,19 +28517,25 @@ C3N-03000.WXS.T.high_cov C3N-03000 PDA WXS tumor CPT0226490006 CPT0226490006.Who C3N-03001.MethArray.Green.T C3N-03001 GBM Methylation Array tumor CPT0248230006 204367470132_R02C01_Grn.idat 13677880 IDAT Green 5f7be741-0480-4521-87ed-f519c24745b9 8026394916dc010d06ab2dbc5129699d NA Primary Tumor C3N-03001.MethArray.Red.T C3N-03001 GBM Methylation Array tumor CPT0248230006 204367470132_R02C01_Red.idat 13677880 IDAT Red adc9401c-f592-47de-a534-3ca99f3cf183 feac0b28926175b4065ead0396f744f2 NA Primary Tumor C3N-03001.miRNA-Seq.T C3N-03001 GBM miRNA-Seq tumor CPT0248230009 200403_UNC31-K00269_0274_AHCF7GBBXY_GGCTAC_S35_L002_R1_001.unaln.bam 220154090 BAM NA ab9934f5-2e2f-49a7-989f-fc5ce90b0ad2 59f997c0994657e8e603673b0562817e NA Primary Tumor +C3N-03001.miRNA-Seq.T.hg38 C3N-03001 GBM miRNA-Seq tumor CPT0248230009 f01b3ee3-eb0d-4faf-9431-51078e0bde67_mirnaseq_gdc_realn.bam 246572830 BAM NA 24b0e422-f608-4908-a1e5-161e44cb2cad 655f8017e3ff204ada57b6197f581e27 hg38 Primary Tumor C3N-03001.RNA-Seq.R1.T C3N-03001 GBM RNA-Seq tumor CPT0248230009 200204_UNC31-K00269_0263_AHG2CJBBXY_TCTCTACT-CGCGGTTC_S3_L001_R1_001.fastq.gz 3761960687 FASTQ NA 1b916065-70cc-431f-923f-2e2305f9491b 132eec228d43b24a9fb5092a6d019865 NA Primary Tumor C3N-03001.RNA-Seq.R2.T C3N-03001 GBM RNA-Seq tumor CPT0248230009 200204_UNC31-K00269_0263_AHG2CJBBXY_TCTCTACT-CGCGGTTC_S3_L001_R2_001.fastq.gz 4621533496 FASTQ NA 634a6d31-e1f2-40a7-b9ee-b14c1965bb5d 4f47f1399b812130c239f1b39deb5fab NA Primary Tumor C3N-03001.WGS.N C3N-03001 GBM WGS blood_normal CPT0248310002 CPT0248310002.WholeGenome.RP-2158.bam 25352497557 BAM NA 680cef4f-4ec7-41c7-91cf-507eb20e1dc9 248cabe88345469bf9bd013dee2ce580 hg19 Blood Derived Normal +C3N-03001.WGS.N.hg38 C3N-03001 GBM WGS blood_normal CPT0248310002 b1328107-60b3-4caa-9aeb-4a20ff059f1b_wgs_gdc_realn.bam 74657515788 BAM NA d094a1b6-d186-450d-8cd9-4581a517d22b 5fcb4f8bdc5921fadbae059e670b309c hg38 Blood Derived Normal C3N-03001.WGS.T C3N-03001 GBM WGS tumor CPT0248230006 CPT0248230006.WholeGenome.RP-2158.bam 20492866379 BAM NA 6006e857-617d-4e76-b433-d456e450cc8c aa598b87a110af43b6fa8dff2fdca44b hg19 Primary Tumor +C3N-03001.WGS.T.hg38 C3N-03001 GBM WGS tumor CPT0248230006 48979019-a7c9-4c9e-8abb-49fd6d26fbcc_wgs_gdc_realn.bam 60902173210 BAM NA 08172ae7-bf7e-4d27-bd8e-4154e1445f55 6733e5e47581da3229b1f616d5ec8cae hg38 Primary Tumor C3N-03001.WXS.N C3N-03001 GBM WXS blood_normal CPT0248310002 CPT0248310002.WholeExome.RP-1303.bam 20959866756 BAM NA 72bcb59e-8385-49e3-91c7-52c7e2cd53e9 0d5c9a9e2cdd83bb58fc9664287255f6 hg19 Blood Derived Normal C3N-03001.WXS.T C3N-03001 GBM WXS tumor CPT0248230006 CPT0248230006.WholeExome.RP-1303.bam 18881735796 BAM NA 2be1cd42-fb56-4660-93fd-8b16cf116f9e 104a581d25eedcf8d83d892e9c84ae93 hg19 Primary Tumor C3N-03003.MethArray.Green.T C3N-03003 GBM Methylation Array tumor CPT0224960006 204372030106_R02C01_Grn.idat 13677885 IDAT Green 82c00b30-c1fb-4d7f-b62d-b1e842ca0ef1 d0ae814e489fd8b398645c8248e617bd NA Primary Tumor C3N-03003.MethArray.Red.T C3N-03003 GBM Methylation Array tumor CPT0224960006 204372030106_R02C01_Red.idat 13677885 IDAT Red df6da8b9-723f-4194-b38e-9ad587d0a819 4ba04447ab9435ef5346518a0395468d NA Primary Tumor C3N-03003.miRNA-Seq.T C3N-03003 GBM miRNA-Seq tumor CPT0224960009 200403_UNC31-K00269_0274_AHCF7GBBXY_GTGGCC_S44_L002_R1_001.unaln.bam 242262802 BAM NA 77dd96e1-b665-4e7a-b3cb-b336a6907184 0d8fed3e0aa24bc83dbd17fce26efa96 NA Primary Tumor +C3N-03003.miRNA-Seq.T.hg38 C3N-03003 GBM miRNA-Seq tumor CPT0224960009 29d318a8-fcc5-430d-a734-e0fd1a07c227_mirnaseq_gdc_realn.bam 266042176 BAM NA 54d4483f-fa2a-46b0-b9ba-2cc022056c7e f89f2419744618c4816ddb50e88b866b hg38 Primary Tumor C3N-03003.RNA-Seq.R1.T C3N-03003 GBM RNA-Seq tumor CPT0224960009 200204_UNC31-K00269_0263_AHG2CJBBXY_GCACGGAC-GTCTCGCA_S12_L003_R1_001.fastq.gz 3196550993 FASTQ NA c465924b-72b1-4df5-858a-bdfdc8c0f484 29e93e21fe30da7ea17daf6e76184148 NA Primary Tumor C3N-03003.RNA-Seq.R2.T C3N-03003 GBM RNA-Seq tumor CPT0224960009 200204_UNC31-K00269_0263_AHG2CJBBXY_GCACGGAC-GTCTCGCA_S12_L003_R2_001.fastq.gz 3735606264 FASTQ NA b68baa4c-eac8-4981-8f81-936605755b5d 9b878312a5c812b1811c8bfe4519a79c NA Primary Tumor C3N-03003.WGS.N C3N-03003 GBM WGS blood_normal CPT0225800002 CPT0225800002.WholeGenome.RP-2158.bam 21861962263 BAM NA afaa9fdc-4de9-4cc5-9cfb-9d5203ce917d 3386854f00785cd9febe25f4129d9b9c hg19 Blood Derived Normal +C3N-03003.WGS.N.hg38 C3N-03003 GBM WGS blood_normal CPT0225800002 201dfe54-d739-488d-9e80-1ced195f0d9b_wgs_gdc_realn.bam 66348324743 BAM NA daaee450-05a7-4451-a8bc-466d4cc6a324 229fb9b7f24b01fcf83b57ed93d99dc7 hg38 Blood Derived Normal C3N-03003.WGS.T C3N-03003 GBM WGS tumor CPT0224960006 CPT0224960006.WholeGenome.RP-2158.bam 21329109644 BAM NA 8f9259aa-8bab-4474-a691-dee8dad78929 222b2e704d7876217d88d8681498942c hg19 Primary Tumor +C3N-03003.WGS.T.hg38 C3N-03003 GBM WGS tumor CPT0224960006 0aca7784-683e-4437-b212-755d450109a4_wgs_gdc_realn.bam 59786107963 BAM NA 1b3e7ab1-5148-4ffa-bc1a-fd0224d0ab94 ce8e85a07b183fa7349ffac6e8ca9ba4 hg38 Primary Tumor C3N-03003.WXS.N C3N-03003 GBM WXS blood_normal CPT0225800002 CPT0225800002.WholeExome.RP-1303.bam 26282388701 BAM NA c4593faf-c37d-4df9-96a5-54b179acbae5 8a88dda550d303fb80a7a41dc98a846d hg19 Blood Derived Normal C3N-03003.WXS.T C3N-03003 GBM WXS tumor CPT0224960006 CPT0224960006.WholeExome.RP-1303.bam 23932320080 BAM NA 52530a4d-7ae0-4fa0-b4a4-a0a9667a4878 7584e0cee2f96d5a869d2030c46e7a58 hg19 Primary Tumor C3N-03005.MethArray.Green.T C3N-03005 UCEC Methylation Array tumor CPT0247940006 203561450073_R02C01_Grn.idat 13676221 IDAT Green 1887d283-2f63-4ad6-b1de-2aa4a821ceac d54cfc5c83d9052405dd9132e15787ce NA Primary Tumor @@ -28323,10 +28800,13 @@ C3N-03021.WXS.T.hg38 C3N-03021 CCRCC WXS tumor CPT0189110006 d1d0580d-8da1-47d0- C3N-03025.MethArray.Green.T C3N-03025 GBM Methylation Array tumor CPT0225840006 204367490151_R02C01_Grn.idat 13677895 IDAT Green 3ab25546-7312-4706-9a9f-b649f293dbc7 6eb0f7337b61819acca71f59b3cda064 NA Primary Tumor C3N-03025.MethArray.Red.T C3N-03025 GBM Methylation Array tumor CPT0225840006 204367490151_R02C01_Red.idat 13677895 IDAT Red a4753ba6-da60-4003-add0-76333a79aefd 5a56bb76142cd244c94ce69d31f579eb NA Primary Tumor C3N-03025.miRNA-Seq.T C3N-03025 GBM miRNA-Seq tumor CPT0225840009 200403_UNC31-K00269_0274_AHCF7GBBXY_GTTTCG_S45_L002_R1_001.unaln.bam 252024670 BAM NA 6528718f-4883-44ce-9c34-afa8cd8e42fc 46e396b4211575b784e9786e78295254 NA Primary Tumor +C3N-03025.miRNA-Seq.T.hg38 C3N-03025 GBM miRNA-Seq tumor CPT0225840009 ea60a154-98b8-4db7-8be8-17e4b8be7d27_mirnaseq_gdc_realn.bam 281649400 BAM NA 8595b7ac-8a46-4859-bd04-100da74c51b1 544467b2a4a26d386e2b4159e2932505 hg38 Primary Tumor C3N-03025.RNA-Seq.R1.T C3N-03025 GBM RNA-Seq tumor CPT0225840009 200204_UNC31-K00269_0263_AHG2CJBBXY_GGTACCTT-AAGACGTC_S13_L004_R1_001.fastq.gz 3206199920 FASTQ NA 6a12152f-6b09-4e4b-87a2-deac64ea83a1 7af7d029b5f85c979d54acde55db043c NA Primary Tumor C3N-03025.RNA-Seq.R2.T C3N-03025 GBM RNA-Seq tumor CPT0225840009 200204_UNC31-K00269_0263_AHG2CJBBXY_GGTACCTT-AAGACGTC_S13_L004_R2_001.fastq.gz 3689785219 FASTQ NA 7ff9e556-fa20-4d91-8dc9-b02275783e96 53f472cb8808a3126bd6f5ce40f7ce57 NA Primary Tumor C3N-03025.WGS.N C3N-03025 GBM WGS blood_normal CPT0225860002 CPT0225860002.WholeGenome.RP-2158.bam 25773776013 BAM NA 59fa4708-fd8f-4566-9d94-f62826f236be a00f5117d3b637515b9b0aa4c2924b89 hg19 Blood Derived Normal +C3N-03025.WGS.N.hg38 C3N-03025 GBM WGS blood_normal CPT0225860002 e7c50500-cae7-47da-be3b-86c64714d880_wgs_gdc_realn.bam 76319967086 BAM NA 17dc03a1-1c8b-464e-b09e-4c6824d6ae7d d80f2fcbb813fb1394e0f80d6e7ead9a hg38 Blood Derived Normal C3N-03025.WGS.T C3N-03025 GBM WGS tumor CPT0225840006 CPT0225840006.WholeGenome.RP-2158.bam 27751823683 BAM NA fee1ecb4-d543-4fe1-acca-0bd9270d3a36 2c64fa5e3439eee3a7342734a675b557 hg19 Primary Tumor +C3N-03025.WGS.T.hg38 C3N-03025 GBM WGS tumor CPT0225840006 db572b5f-fd90-4c8b-8609-1e5cd0c44585_wgs_gdc_realn.bam 82837102023 BAM NA 6e5ce309-2ebb-46ee-abf4-570a730bc5b8 a7d5b83ba8442c9e923a5f852b5659c8 hg38 Primary Tumor C3N-03025.WXS.N C3N-03025 GBM WXS blood_normal CPT0225860002 CPT0225860002.WholeExome.RP-1303.bam 25504805473 BAM NA 5dcf63ed-7c2c-4759-8060-988e9dd64f99 cb34d0ca7dc61e53a147a2f0fefe5b0a hg19 Blood Derived Normal C3N-03025.WXS.T C3N-03025 GBM WXS tumor CPT0225840006 CPT0225840006.WholeExome.RP-1303.bam 18505020552 BAM NA b5e8f3a9-dad6-4e6d-ba0a-a5b93814283f e438bf5d539579033441d4d01f24168b hg19 Primary Tumor C3N-03027.MethArray.Green.A C3N-03027 HNSCC Methylation Array tissue_normal CPT0226400006 203273200073_R05C01_Grn.idat 13676206 IDAT Green f565bc41-7c7f-4bd6-8fe8-a35f960803f0 4e0709ed2adc352c4d8fde4aed75ac2b NA Solid Tissue Normal @@ -29005,6 +29485,8 @@ C3N-03186.RNA-Seq.genomic.T.hg38 C3N-03186 GBM RNA-Seq tumor CPT0206880006 3e4f8 C3N-03186.RNA-Seq.R1.T C3N-03186 GBM RNA-Seq tumor CPT0206880006 181207_UNC32-K00270_0136_AH2N7LBBXY_GCCAAT_S2_L001_R1_001.fastq.gz 3759023432 FASTQ NA 87bab1d0-10a6-491d-8199-c5edd2946f2b 5f194eec615c5ca976d3a64bd0106c35 NA Primary Tumor C3N-03186.RNA-Seq.R2.T C3N-03186 GBM RNA-Seq tumor CPT0206880006 181207_UNC32-K00270_0136_AH2N7LBBXY_GCCAAT_S2_L001_R2_001.fastq.gz 4161674954 FASTQ NA 9d47e501-79d8-4891-9c5c-8fb876837447 7f03c4090cfd22a7bee82458fecd6c4c NA Primary Tumor C3N-03186.RNA-Seq.transcriptome.T.hg38 C3N-03186 GBM RNA-Seq tumor CPT0206880006 3e4f82c1-fb53-4522-9ae5-6a5034b96bed.rna_seq.transcriptome.gdc_realn.bam 9098436389 BAM transcriptome 73a73bac-a31a-428b-b7b0-6bf6d1109c8d 144ea1d3dac30d0b5edcae51e24cd6ba hg38 Primary Tumor +C3N-03186.scRNA-Seq.R1.T C3N-03186 GBM scRNA-Seq tumor CPT0206880004 20200622_WUSTL_CPT0206880004_TCTCAGTG-GAGACTAT-CGCTTAGC-ATAGGCCA_S4_L001_R1_001.fastq.gz 10703766166 FASTQ NA 9df1cb87-32b3-4477-982b-9af04c3f4ccd 047d7739b6a6ebeface55d18c487b02a NA Primary Tumor +C3N-03186.scRNA-Seq.R2.T C3N-03186 GBM scRNA-Seq tumor CPT0206880004 20200622_WUSTL_CPT0206880004_TCTCAGTG-GAGACTAT-CGCTTAGC-ATAGGCCA_S4_L001_R2_001.fastq.gz 24638505648 FASTQ NA 25dd41d3-2be1-46c4-9630-443e70d3fbd3 fd3d03b1ea01950154acb863c658a6d4 NA Primary Tumor C3N-03186.WGS.N C3N-03186 GBM WGS blood_normal CPT0206940002 CPT0206940002.WholeGenome.RP-1303.bam 65040645125 BAM NA 9f5d33fa-acdf-44fe-b14f-ece6991eb1bf 155895ce934cf3f649541e1a26eba8d7 hg19 Blood Derived Normal C3N-03186.WGS.N.hg38 C3N-03186 GBM WGS blood_normal CPT0206940002 6e67dba7-0c71-4c45-9d0b-d93b5a185421_wgs_gdc_realn.bam 97634516512 BAM NA b30947ce-f48f-4950-a79b-c14d5b5f8260 528850f8287a1fb0c30349d3bc5ef967 hg38 Blood Derived Normal C3N-03186.WGS.T C3N-03186 GBM WGS tumor CPT0206880009 CPT0206880009.WholeGenome.RP-1303.bam 77551110154 BAM NA 16fc5973-a920-4c24-ba52-bf1003b15320 0162d841a527b869868fa690015b111d hg19 Primary Tumor @@ -29627,37 +30109,49 @@ C3N-03441.WXS.T.hg38 C3N-03441 LSCC WXS tumor CPT0245880006 32dd99c7-d21a-4c9d-9 C3N-03448.MethArray.Green.T C3N-03448 GBM Methylation Array tumor CPT0225870006 204372030127_R02C01_Grn.idat 13677880 IDAT Green 0695eb5d-f8ff-4fa1-88ea-e2b4348583f1 8748ce07993cb7e7e05e622a8502101a NA Primary Tumor C3N-03448.MethArray.Red.T C3N-03448 GBM Methylation Array tumor CPT0225870006 204372030127_R02C01_Red.idat 13677880 IDAT Red 58b8baf0-e2d0-4d78-b683-175aa024940f ce8441014e6623091a86ab6082bf0661 NA Primary Tumor C3N-03448.miRNA-Seq.T C3N-03448 GBM miRNA-Seq tumor CPT0225870013 200513_UNC31-K00269_0278_BHH7Y7BBXY_CATTTT_S35_L008_R1_001.unaln.bam 301304798 BAM NA ed576d30-32bf-49ac-8c9e-578a83e34954 0248c4f80b6d477a2c8a02d234b212b9 NA Primary Tumor +C3N-03448.miRNA-Seq.T.hg38 C3N-03448 GBM miRNA-Seq tumor CPT0225870013 eeec2ff6-2b25-402c-ad52-d9ab89e5ede0_mirnaseq_gdc_realn.bam 327854229 BAM NA 640768a1-ee61-4959-8019-5b652de1bec9 e7975942bb304e5ed73ff7b4ceb777a2 hg38 Primary Tumor C3N-03448.RNA-Seq.R1.T C3N-03448 GBM RNA-Seq tumor CPT0225870013 200212_UNC31-K00269_0265_BHGCWGBBXY_GCGCTCTA-GCTCCGAC_S13_L004_R1_001.fastq.gz 3327309748 FASTQ NA 3338a3d1-7dfb-47eb-a5f9-d95dce211972 b62fac399efece5dcebd0e2a1cfe2d27 NA Primary Tumor C3N-03448.RNA-Seq.R2.T C3N-03448 GBM RNA-Seq tumor CPT0225870013 200212_UNC31-K00269_0265_BHGCWGBBXY_GCGCTCTA-GCTCCGAC_S13_L004_R2_001.fastq.gz 3770954643 FASTQ NA 1ed68c0c-2d05-45a3-8479-5b09081e06b3 94ff1c499b7dc256f52514e33feb9ae1 NA Primary Tumor C3N-03448.WGS.N C3N-03448 GBM WGS blood_normal CPT0225890002 CPT0225890002.WholeGenome.RP-2158.bam 26717378576 BAM NA 28bef61d-1ebb-4e66-8d27-9c253535c98c a7e086d03fa73f5efbdf2b968ffd3413 hg19 Blood Derived Normal +C3N-03448.WGS.N.hg38 C3N-03448 GBM WGS blood_normal CPT0225890002 cc3fdea7-e732-40b1-a3c8-76a0a704400b_wgs_gdc_realn.bam 78736410378 BAM NA 38086ca8-0290-41a9-8ed4-b7db18d6022f 7d99607de5bfbd14b3bfbf5ea1784ecb hg38 Blood Derived Normal C3N-03448.WGS.T C3N-03448 GBM WGS tumor CPT0225870006 CPT0225870006.WholeGenome.RP-2158.bam 27006538735 BAM NA 56676a0e-5175-45ec-ad15-48766365d3d9 a21b029924ff3bdce7f04cf947d5bf46 hg19 Primary Tumor +C3N-03448.WGS.T.hg38 C3N-03448 GBM WGS tumor CPT0225870006 88b92c30-d2a1-4082-8f8a-74b0c810e12c_wgs_gdc_realn.bam 81360762813 BAM NA b713420f-1781-4045-8984-5ad7e13ee429 ad6ff65698af8878a66bb1c8bee0fbc7 hg38 Primary Tumor C3N-03448.WXS.N C3N-03448 GBM WXS blood_normal CPT0225890002 CPT0225890002.WholeExome.RP-1303.bam 26594326910 BAM NA cbda0e56-2b5d-4399-b501-9f8f109f2a11 700bb82df53726479b1a8d4e8cc471a5 hg19 Blood Derived Normal C3N-03448.WXS.T C3N-03448 GBM WXS tumor CPT0225870006 CPT0225870006.WholeExome.RP-1303.bam 25599255128 BAM NA 1ed97cb4-7639-4cc6-a9c8-96b394f3f684 8354f579247c603c34b68c81c477984f hg19 Primary Tumor C3N-03449.MethArray.Green.T C3N-03449 GBM Methylation Array tumor CPT0225900006 204372030161_R02C01_Grn.idat 13677880 IDAT Green da2106f0-deed-4164-b4f3-ea72d4cf40e0 df53605c9ca5ff5c3d8d5ac4532eadd5 NA Primary Tumor C3N-03449.MethArray.Red.T C3N-03449 GBM Methylation Array tumor CPT0225900006 204372030161_R02C01_Red.idat 13677880 IDAT Red b56d60b0-d2b6-4aa5-abf5-a748290a9987 d4664862318d7784b09efab7c58b640a NA Primary Tumor C3N-03449.miRNA-Seq.T C3N-03449 GBM miRNA-Seq tumor CPT0225900009 200403_UNC31-K00269_0274_AHCF7GBBXY_CGTACG_S46_L002_R1_001.unaln.bam 195887899 BAM NA ecaf2935-c115-48e2-95b7-cdb322278f82 5aa6f3e0016d098ac3acdcd40fa10b19 NA Primary Tumor +C3N-03449.miRNA-Seq.T.hg38 C3N-03449 GBM miRNA-Seq tumor CPT0225900009 4cc2f843-c740-42b7-967a-6a4d834c3d1a_mirnaseq_gdc_realn.bam 212546070 BAM NA 22ac38ed-4b1e-4075-9ad1-2b3cbb456f1e c2fa16b573e496b393e44a6bdc8b6c69 hg38 Primary Tumor C3N-03449.RNA-Seq.R1.T C3N-03449 GBM RNA-Seq tumor CPT0225900009 200204_UNC31-K00269_0263_AHG2CJBBXY_AACGTTCC-GGAGTACT_S14_L004_R1_001.fastq.gz 2970863888 FASTQ NA d8df9e03-10b6-41a3-972f-b6038ca02881 e6dc54aa448f276e4089d1ead66c8871 NA Primary Tumor C3N-03449.RNA-Seq.R2.T C3N-03449 GBM RNA-Seq tumor CPT0225900009 200204_UNC31-K00269_0263_AHG2CJBBXY_AACGTTCC-GGAGTACT_S14_L004_R2_001.fastq.gz 3464598047 FASTQ NA 289921b1-b467-487e-ad93-095bdb3834ce a20a1070426b794a2829f22d7259bf6d NA Primary Tumor C3N-03449.WGS.N C3N-03449 GBM WGS blood_normal CPT0225920002 CPT0225920002.WholeGenome.RP-2158.bam 20948538145 BAM NA de4e7d48-94d5-4d04-b1f0-54961182666b 528e6538115761445f72a8fb7f8c816d hg19 Blood Derived Normal +C3N-03449.WGS.N.hg38 C3N-03449 GBM WGS blood_normal CPT0225920002 42736975-7e8e-49ed-b85f-298eab5e784c_wgs_gdc_realn.bam 63629727764 BAM NA 12254d50-a4ec-4853-9b55-6e923e7ad99a 291df2c963457d4e6eaed5edd2cd1712 hg38 Blood Derived Normal C3N-03449.WGS.T C3N-03449 GBM WGS tumor CPT0225900006 CPT0225900006.WholeGenome.RP-2158.bam 27759977402 BAM NA dee71466-6729-4791-8938-13ae43573976 852ee2c6f47a4683394a11a52dac8e87 hg19 Primary Tumor +C3N-03449.WGS.T.hg38 C3N-03449 GBM WGS tumor CPT0225900006 95344601-8d6d-4b58-b23c-2482f039b375_wgs_gdc_realn.bam 82964057648 BAM NA cd651894-4cf9-42a1-a907-d8a88f56d660 a2830840e29acd293ceddb4ecb28d68a hg38 Primary Tumor C3N-03449.WXS.N C3N-03449 GBM WXS blood_normal CPT0225920002 CPT0225920002.WholeExome.RP-1303.bam 22286780870 BAM NA f32cb33d-4283-4ce0-b90f-208b6862f1bb f1c8cdf0b7be9cad3e79f63e257e19c3 hg19 Blood Derived Normal C3N-03449.WXS.T C3N-03449 GBM WXS tumor CPT0225900006 CPT0225900006.WholeExome.RP-1303.bam 27253392773 BAM NA d08b9b23-6040-4abc-8473-a56667167668 5a31cc572dafba9c5fa87bb3eb01fa53 hg19 Primary Tumor C3N-03452.MethArray.Green.T C3N-03452 GBM Methylation Array tumor CPT0225960006 204372030076_R02C01_Grn.idat 13677890 IDAT Green bc8ab5ba-51f4-4ff2-9616-8708f899897e 3b21f01780991f8a065b8b6b2eee2574 NA Primary Tumor C3N-03452.MethArray.Red.T C3N-03452 GBM Methylation Array tumor CPT0225960006 204372030076_R02C01_Red.idat 13677890 IDAT Red 8e4a41b8-214c-475b-b807-329b14932312 cedfee86c5e2ea8066655cbd30a67eba NA Primary Tumor C3N-03452.miRNA-Seq.T C3N-03452 GBM miRNA-Seq tumor CPT0225960013 200513_UNC31-K00269_0278_BHH7Y7BBXY_CGGAAT_S37_L008_R1_001.unaln.bam 550754421 BAM NA 414331cd-a344-4884-b014-b3a7e7a3d082 5eaabd04c5e6fad466731b1c452b2bb5 NA Primary Tumor +C3N-03452.miRNA-Seq.T.hg38 C3N-03452 GBM miRNA-Seq tumor CPT0225960013 43f66e46-99a8-446a-ae78-9fdd0d0e5b4d_mirnaseq_gdc_realn.bam 608275622 BAM NA 44aafc75-b3f5-4fff-b65f-c8119d490480 ba1efe868bcb2b37710b3f8f15a54e00 hg38 Primary Tumor C3N-03452.RNA-Seq.R1.T C3N-03452 GBM RNA-Seq tumor CPT0225960013 200212_UNC31-K00269_0265_BHGCWGBBXY_GGTGAACC-GCGTTGGA_S15_L004_R1_001.fastq.gz 4124764165 FASTQ NA bcb5374d-d91f-4617-9a0b-33efb9238a3f e0a81f77e3650dda5d720b648bab8bf4 NA Primary Tumor C3N-03452.RNA-Seq.R2.T C3N-03452 GBM RNA-Seq tumor CPT0225960013 200212_UNC31-K00269_0265_BHGCWGBBXY_GGTGAACC-GCGTTGGA_S15_L004_R2_001.fastq.gz 4459558489 FASTQ NA 1b82dc44-54ea-4dcb-8e7c-5b0167c478f0 97c74b84f8570811e77ebd4bf33662bd NA Primary Tumor C3N-03452.WGS.N C3N-03452 GBM WGS blood_normal CPT0225980002 CPT0225980002.WholeGenome.RP-2158.bam 22971225120 BAM NA 68708734-7e8f-4ab9-88bb-310161053f46 fce54004bf972fdcd867e312b954dd2e hg19 Blood Derived Normal +C3N-03452.WGS.N.hg38 C3N-03452 GBM WGS blood_normal CPT0225980002 3d82230b-c081-4c11-9e1f-aed013981520_wgs_gdc_realn.bam 68800975416 BAM NA cd7df227-d920-4949-8ab7-191412252216 4f4f27e2b036896d32d61b21a4ece33c hg38 Blood Derived Normal C3N-03452.WGS.T C3N-03452 GBM WGS tumor CPT0225960006 CPT0225960006.WholeGenome.RP-2158.bam 28423091199 BAM NA 1c720dd8-6b46-4f2f-a8a2-603d62919edf 07408cbcfd520563687e50048c7991f2 hg19 Primary Tumor +C3N-03452.WGS.T.hg38 C3N-03452 GBM WGS tumor CPT0225960006 c2109dc6-60b3-4bbe-b997-c781791a92c2_wgs_gdc_realn.bam 80891834156 BAM NA 285e6dc0-38fe-4ca5-a01c-d4ea82565353 eebaa2495a49ff880a2d89e04eea7897 hg38 Primary Tumor C3N-03452.WXS.N C3N-03452 GBM WXS blood_normal CPT0225980002 CPT0225980002.WholeExome.RP-1303.bam 22176413678 BAM NA 58d9dc12-c34c-4698-b5f3-c3f0feb17aaf a550ab37b09fd9a08c96fc532b0a9076 hg19 Blood Derived Normal C3N-03452.WXS.T C3N-03452 GBM WXS tumor CPT0225960006 CPT0225960006.WholeExome.RP-1303.bam 22236745714 BAM NA 24342f75-a181-44f5-8cbc-d85dd5e52dd7 0dff0b2e53bb774a6483acd19ef4c87e hg19 Primary Tumor C3N-03453.MethArray.Green.T C3N-03453 GBM Methylation Array tumor CPT0225990006 204372030074_R03C01_Grn.idat 13677880 IDAT Green 23b4f85c-7359-4026-aaa6-d21609c3e13f 5d78a25fb26c698d919e87aa7d0c33e4 NA Primary Tumor C3N-03453.MethArray.Red.T C3N-03453 GBM Methylation Array tumor CPT0225990006 204372030074_R03C01_Red.idat 13677880 IDAT Red efbbbef3-a8fd-412f-9c08-0c0fd72ea9b5 8db90441f98f19fff5bef6c25fb29ee1 NA Primary Tumor C3N-03453.miRNA-Seq.T C3N-03453 GBM miRNA-Seq tumor CPT0225990009 200403_UNC31-K00269_0274_AHCF7GBBXY_GAGTGG_S47_L002_R1_001.unaln.bam 223237672 BAM NA 6217d0df-86ef-4370-83b8-14a0cbb79c93 e021dda425a7f1253dfd46b062384f68 NA Primary Tumor +C3N-03453.miRNA-Seq.T.hg38 C3N-03453 GBM miRNA-Seq tumor CPT0225990009 31f7f397-5252-408c-9d42-f5b47fb792a2_mirnaseq_gdc_realn.bam 251493832 BAM NA 934da61a-31c6-4721-b765-fa396d4d6fb9 d43bef71ce179990a5cb07ebb01a937a hg38 Primary Tumor C3N-03453.RNA-Seq.R1.T C3N-03453 GBM RNA-Seq tumor CPT0225990009 200204_UNC31-K00269_0263_AHG2CJBBXY_GCAGAATT-ACCGGCCA_S15_L004_R1_001.fastq.gz 3276064888 FASTQ NA a3a1d4f8-d8b2-4e47-be49-bfd4d235448f 079d99c882bd6b518f785c2443b2f67d NA Primary Tumor C3N-03453.RNA-Seq.R2.T C3N-03453 GBM RNA-Seq tumor CPT0225990009 200204_UNC31-K00269_0263_AHG2CJBBXY_GCAGAATT-ACCGGCCA_S15_L004_R2_001.fastq.gz 3711563895 FASTQ NA d643ac36-a2be-46bd-bcf4-eac66dfe9253 4c3cc69b20daee63f04557ea5545831d NA Primary Tumor C3N-03453.WGS.N C3N-03453 GBM WGS blood_normal CPT0226010002 CPT0226010002.WholeGenome.RP-2158.bam 22150234243 BAM NA 684bad64-e371-4a9d-8370-e390a5d037fc d34c8ba3d9adb274621976f47cd2df08 hg19 Blood Derived Normal +C3N-03453.WGS.N.hg38 C3N-03453 GBM WGS blood_normal CPT0226010002 883e62e0-05c1-4b41-9315-d32aa83e8990_wgs_gdc_realn.bam 66079008259 BAM NA 668c831a-265b-418f-8444-303ea0d612f0 ada18c68aa85826a9007bd0e69d171dc hg38 Blood Derived Normal C3N-03453.WGS.T C3N-03453 GBM WGS tumor CPT0225990006 CPT0225990006.WholeGenome.RP-2158.bam 21511984237 BAM NA 67e71faf-078b-4b6b-881c-7411be49f4c9 eb0027bbb09bbec77ee849d56c6a43dd hg19 Primary Tumor +C3N-03453.WGS.T.hg38 C3N-03453 GBM WGS tumor CPT0225990006 bce376c8-06f6-4242-a32b-9488f7f4eb82_wgs_gdc_realn.bam 60130960553 BAM NA 3ab79ed1-6153-4d61-82c9-191f5573df89 233dfc960658ac299372f971aec70c97 hg38 Primary Tumor C3N-03453.WXS.N C3N-03453 GBM WXS blood_normal CPT0226010002 CPT0226010002.WholeExome.RP-1303.bam 25670725042 BAM NA 1f9e6366-516d-4bb4-993f-cc7a657b9dba 300093c8e1173ca510b5c8dc0a447f61 hg19 Blood Derived Normal C3N-03453.WXS.T C3N-03453 GBM WXS tumor CPT0225990006 CPT0225990006.WholeExome.RP-1303.bam 26650952812 BAM NA 3e7c70a6-be10-4a69-9f83-8ef515a0d505 64f04855554e54533ea8017654057f18 hg19 Primary Tumor C3N-03456.MethArray.Green.T C3N-03456 HNSCC Methylation Array tumor CPT0246590006 203220070165_R05C01_Grn.idat 13676206 IDAT Green 4088662d-239a-45c8-87e2-972656a71861 72e792156e1c566b6c0bc9b28aabad1e NA Primary Tumor @@ -29731,18 +30225,25 @@ C3N-03473.WXS.T.hg38 C3N-03473 GBM WXS tumor CPT0207090009 ddb69d52-0d77-4d38-89 C3N-03480.MethArray.Green.T C3N-03480 GBM Methylation Array tumor CPT0285090006 204367470127_R01C01_Grn.idat 13677890 IDAT Green dcd47add-8068-4837-8af7-df2f3fc4b886 ac7a643d06d8ec150099d9192c9e015b NA Primary Tumor C3N-03480.MethArray.Red.T C3N-03480 GBM Methylation Array tumor CPT0285090006 204367470127_R01C01_Red.idat 13677890 IDAT Red 2bf886bd-d727-4cc4-aba6-d4389067e5b7 44517774a99c20c55c7932a4a0a98b74 NA Primary Tumor C3N-03480.miRNA-Seq.T C3N-03480 GBM miRNA-Seq tumor CPT0285090009 200403_UNC31-K00269_0274_AHCF7GBBXY_CACTCA_S8_L001_R1_001.unaln.bam 218234486 BAM NA 6d08ac4e-9ef8-42f5-bd4b-e1ff48f71064 f4566f1a0a0c9299df660ae347f52059 NA Primary Tumor +C3N-03480.miRNA-Seq.T.hg38 C3N-03480 GBM miRNA-Seq tumor CPT0285090009 0ac9c4aa-8860-43ac-987e-ea5c74700679_mirnaseq_gdc_realn.bam 241747354 BAM NA acf6192c-1d46-4746-a7fb-06f192c055ad b5a25a91ad10ad8b4dd31135171ecaa1 hg38 Primary Tumor C3N-03480.RNA-Seq.R1.T C3N-03480 GBM RNA-Seq tumor CPT0285090009 200204_UNC31-K00269_0263_AHG2CJBBXY_AATGCCTC-TCGATCCA_S24_L006_R1_001.fastq.gz 2521737632 FASTQ NA f76e24bf-2452-4f99-8d37-8cbe2327cfbc 932e71315f55429ab7f6664487fe1235 NA Primary Tumor C3N-03480.RNA-Seq.R2.T C3N-03480 GBM RNA-Seq tumor CPT0285090009 200204_UNC31-K00269_0263_AHG2CJBBXY_AATGCCTC-TCGATCCA_S24_L006_R2_001.fastq.gz 2906005713 FASTQ NA 4dc1a8c2-6c07-43e4-9901-b5885da43e33 8462769cb3622ada2925b32052e4721e NA Primary Tumor C3N-03480.WGS.N C3N-03480 GBM WGS blood_normal CPT0285120002 CPT0285120002.WholeGenome.RP-2158.bam 22643381148 BAM NA 106b7fd7-a720-49cb-9c8a-4bc96ff0ff72 dd734b7f0fbf58402388634782c5341b hg19 Blood Derived Normal +C3N-03480.WGS.N.hg38 C3N-03480 GBM WGS blood_normal CPT0285120002 8546651a-1f37-4289-8c55-d588c65768e2_wgs_gdc_realn.bam 69550902854 BAM NA 2e9debd8-9891-4238-bea9-3329317f7f86 3a72aae9d4bd8657aee2a1704a43d4d1 hg38 Blood Derived Normal C3N-03480.WGS.T C3N-03480 GBM WGS tumor CPT0285090006 CPT0285090006.WholeGenome.RP-2158.bam 23801172742 BAM NA b08961ab-c5d2-4a32-8072-78e42d543d91 5d1096c6409612d8b6f437883c77d847 hg19 Primary Tumor +C3N-03480.WGS.T.hg38 C3N-03480 GBM WGS tumor CPT0285090006 48422358-852c-4656-ae8a-0128e64c2c10_wgs_gdc_realn.bam 70954323517 BAM NA ed1dba4a-0836-458e-add2-86f0bae54d89 15ab58f8d3cb693824a51e0f72fa9035 hg38 Primary Tumor C3N-03480.WXS.N C3N-03480 GBM WXS blood_normal CPT0285120002 CPT0285120002.WholeExome.RP-1303.bam 31013845954 BAM NA 1e435f35-5da3-4a71-bb2b-093597145467 1f64425f59593f18fb4a524aa70ebd8a hg19 Blood Derived Normal +C3N-03480.WXS.T C3N-03480 GBM WXS tumor CPT0285090006 CPT0285090006.WholeExome.RP-1303.bam 28711739181 BAM NA e0db6a83-d137-4648-a861-3060e2ec26c7 fdd78aa36a9bdfaed2cc4a5df3caef24 hg19 Primary Tumor C3N-03484.MethArray.Green.T C3N-03484 GBM Methylation Array tumor CPT0285140006 204367490082_R02C01_Grn.idat 13677900 IDAT Green b367671d-60d4-497f-9353-3477351580dd b3104c0ce9f6fe8311a00e4557a209f6 NA Primary Tumor C3N-03484.MethArray.Red.T C3N-03484 GBM Methylation Array tumor CPT0285140006 204367490082_R02C01_Red.idat 13677900 IDAT Red b26e4c8c-e830-4c8a-a64a-fb25a223e253 94f01aa74732ae3cc37935509d154d7e NA Primary Tumor C3N-03484.miRNA-Seq.T C3N-03484 GBM miRNA-Seq tumor CPT0285140009 200403_UNC31-K00269_0274_AHCF7GBBXY_CAGGCG_S9_L001_R1_001.unaln.bam 182189713 BAM NA c2af4430-bc61-4c52-9467-3594592c364c 23683843adb24c2a85f7f30777c68cac NA Primary Tumor +C3N-03484.miRNA-Seq.T.hg38 C3N-03484 GBM miRNA-Seq tumor CPT0285140009 386b1cd0-36e9-4c81-994f-1bf017803701_mirnaseq_gdc_realn.bam 208439388 BAM NA bccef22b-a159-45a2-ab4f-e61e30f1938f 88383fb95ae40dc1c06614bd9480255e hg38 Primary Tumor C3N-03484.RNA-Seq.R1.T C3N-03484 GBM RNA-Seq tumor CPT0285140009 200204_UNC31-K00269_0263_AHG2CJBBXY_TACCGAGG-CCTGAACT_S25_L007_R1_001.fastq.gz 2974015739 FASTQ NA 43c7c7da-6399-4ecb-b5e9-7bd1481fd3af 642c44b9a5e2ebc892d941de95d8fdee NA Primary Tumor C3N-03484.RNA-Seq.R2.T C3N-03484 GBM RNA-Seq tumor CPT0285140009 200204_UNC31-K00269_0263_AHG2CJBBXY_TACCGAGG-CCTGAACT_S25_L007_R2_001.fastq.gz 3472658451 FASTQ NA f10504f3-e9a4-4e87-9cda-7b7d225d0b17 85cab8bec0009082ed2f99c046fbbbe3 NA Primary Tumor C3N-03484.WGS.N C3N-03484 GBM WGS blood_normal CPT0285150002 CPT0285150002.WholeGenome.RP-2158.bam 29465818741 BAM NA 1123e65d-b1d8-4090-9660-a5b192325c5d 9aa4f6135fe7b71553ee013bb2d0b8cb hg19 Blood Derived Normal +C3N-03484.WGS.N.hg38 C3N-03484 GBM WGS blood_normal CPT0285150002 258921c4-2923-423e-baae-2d7c9530872c_wgs_gdc_realn.bam 87200070473 BAM NA 9b795115-1bc6-4f21-96c6-53a3249ce701 ffa87c7023b32f9163508f6c96a1a623 hg38 Blood Derived Normal C3N-03484.WGS.T C3N-03484 GBM WGS tumor CPT0285140006 CPT0285140006.WholeGenome.RP-2158.bam 20856065528 BAM NA d4e3ab41-533f-487c-b10e-ee7bc793d949 e40cd7d46a37881d1c44ff4401b025d3 hg19 Primary Tumor +C3N-03484.WGS.T.hg38 C3N-03484 GBM WGS tumor CPT0285140006 fc55acf5-fe90-40c2-9d6f-665007d5bf46_wgs_gdc_realn.bam 62228038734 BAM NA aa9d8b69-0f53-4ddb-8e1c-8b7e98a4842e ddb5d90f0e65e4b4fb4b3156fcf0957c hg38 Primary Tumor C3N-03484.WXS.N C3N-03484 GBM WXS blood_normal CPT0285150002 CPT0285150002.WholeExome.RP-1303.bam 23963647596 BAM NA f8cce809-a398-47be-8948-746afe7eec16 02ac6be8ecc3a454e94bfb2d96ba813e hg19 Blood Derived Normal C3N-03484.WXS.T C3N-03484 GBM WXS tumor CPT0285140006 CPT0285140006.WholeExome.RP-1303.bam 24592525747 BAM NA b8cccab3-76d7-4121-bc02-0595bb4339d7 698076270233e1e424e2a4f263029c3e hg19 Primary Tumor C3N-03486.MethArray.Green.T C3N-03486 LSCC Methylation Array tumor CPT0195510009 203219640095_R04C01_Grn.idat 13676216 IDAT Green 254f5627-ebdb-4f3b-9a1c-36b9da4fbdb4 0faf8f360275021735578efd480b6e5b NA Primary Tumor @@ -30050,28 +30551,37 @@ C3N-03754.WXS.T.high_cov C3N-03754 PDA WXS tumor CPT0246810006 CPT0246810006.Who C3N-03755.MethArray.Green.T C3N-03755 GBM Methylation Array tumor CPT0248080006 204367490090_R02C01_Grn.idat 13677885 IDAT Green 6530c9a6-bc4e-4c26-b3dc-b489e051efcf 4d7dc9d9fb8acc70e7d1387a90474869 NA Primary Tumor C3N-03755.MethArray.Red.T C3N-03755 GBM Methylation Array tumor CPT0248080006 204367490090_R02C01_Red.idat 13677885 IDAT Red 23877301-42b9-48b0-bd53-ac21f17fff1a 6c4d2209470cdb4c62797a7e93faed50 NA Primary Tumor C3N-03755.miRNA-Seq.T C3N-03755 GBM miRNA-Seq tumor CPT0248080009 200403_UNC31-K00269_0274_AHCF7GBBXY_ACTTGA_S32_L002_R1_001.unaln.bam 205351927 BAM NA 800060ad-d37e-49bd-82c9-99afe8462146 13ede4f16546d4b233b5f1a4e9d23d28 NA Primary Tumor +C3N-03755.miRNA-Seq.T.hg38 C3N-03755 GBM miRNA-Seq tumor CPT0248080009 05fdecb5-b154-4c51-be6a-4ab26d0ef0ac_mirnaseq_gdc_realn.bam 227839068 BAM NA 34fe4f31-bd59-4ee0-b450-71b440bb2c5f 64e124fe00583634e650afaf98f60848 hg38 Primary Tumor C3N-03755.RNA-Seq.R1.T C3N-03755 GBM RNA-Seq tumor CPT0248080009 200129_UNC31-K00269_0261_AHG2CLBBXY_TGGATCGA-GTGCGATA_S12_L008_R1_001.fastq.gz 3404251189 FASTQ NA b845241e-88cb-4f0c-9247-637536d1a2af 4facde3709a6078e7ace78543bf766d0 NA Primary Tumor C3N-03755.RNA-Seq.R2.T C3N-03755 GBM RNA-Seq tumor CPT0248080009 200129_UNC31-K00269_0261_AHG2CLBBXY_TGGATCGA-GTGCGATA_S12_L008_R2_001.fastq.gz 3855275179 FASTQ NA 76548cbb-338c-4415-83dd-81b50d9ec658 c0a4204b5e54bd6c5c696decee768a27 NA Primary Tumor C3N-03755.WGS.N C3N-03755 GBM WGS blood_normal CPT0248100002 CPT0248100002.WholeGenome.RP-2158.bam 22211557499 BAM NA e29350af-b032-4737-bb26-93bc812e18e9 5605784aebae86d2ea2b381aa5600bb9 hg19 Blood Derived Normal +C3N-03755.WGS.N.hg38 C3N-03755 GBM WGS blood_normal CPT0248100002 50fce217-0cc7-4115-8100-8251b2e1dbe8_wgs_gdc_realn.bam 66609631094 BAM NA dbdb5f5a-a6ce-4299-9a44-e0ea85c470a6 5883ee296ed86131d4af56ac4beb6232 hg38 Blood Derived Normal C3N-03755.WGS.T C3N-03755 GBM WGS tumor CPT0248080006 CPT0248080006.WholeGenome.RP-2158.bam 25993185932 BAM NA 5ab180dc-d608-4f96-8b61-02cda9280ef7 dbf71b95b8ec11bf91fa650e6676d544 hg19 Primary Tumor +C3N-03755.WGS.T.hg38 C3N-03755 GBM WGS tumor CPT0248080006 b2f4855a-2a82-45c0-89f6-9132cc61a9a4_wgs_gdc_realn.bam 75535747829 BAM NA 3441fcde-5a81-4c50-8ec0-24c4ec3bb284 3af63bce84bc920341c0874ae7b99659 hg38 Primary Tumor C3N-03755.WXS.N C3N-03755 GBM WXS blood_normal CPT0248100002 CPT0248100002.WholeExome.RP-1303.bam 23664884530 BAM NA b06fbb9f-2cc9-44af-b3ed-238b820450e9 4f9c1cac9736cbc3340cb9d6ef2b5c99 hg19 Blood Derived Normal C3N-03755.WXS.T C3N-03755 GBM WXS tumor CPT0248080006 CPT0248080006.WholeExome.RP-1303.bam 17601322610 BAM NA 52fa5352-c351-47f9-aa53-005005a6956f 41b0b33f9a69cd3b868fbf6bfb124f13 hg19 Primary Tumor C3N-03756.MethArray.Green.T C3N-03756 GBM Methylation Array tumor CPT0248110006 204367460011_R02C01_Grn.idat 13677880 IDAT Green 6cb98e91-7c0d-4d2a-b29e-62de72afbc50 75f8b248f004bf8050090c1e67bed672 NA Primary Tumor C3N-03756.MethArray.Red.T C3N-03756 GBM Methylation Array tumor CPT0248110006 204367460011_R02C01_Red.idat 13677880 IDAT Red 848db9be-9afd-4aa2-973b-76f9b61082cf 0e1c87ae1b048426f226420e0e475ef7 NA Primary Tumor C3N-03756.miRNA-Seq.T C3N-03756 GBM miRNA-Seq tumor CPT0248110009 200403_UNC31-K00269_0274_AHCF7GBBXY_GATCAG_S33_L002_R1_001.unaln.bam 177102291 BAM NA 410550af-6a72-4a8b-8ffc-d101ef5458ba 9320443e61b220f6b3f1afae72eeb3c9 NA Primary Tumor +C3N-03756.miRNA-Seq.T.hg38 C3N-03756 GBM miRNA-Seq tumor CPT0248110009 2e4b0676-8a92-47e5-8e9a-8bef3b29fccd_mirnaseq_gdc_realn.bam 199862148 BAM NA 33bbf501-79d7-4b50-8df8-8c8ce30d0aca a1c120077ffdcf962a6027dbab7c535f hg38 Primary Tumor C3N-03756.RNA-Seq.R1.T C3N-03756 GBM RNA-Seq tumor CPT0248110009 200518_UNC32-K00270_0247_AHH573BBXY_AGTTCAGG-CCAACAGA_S26_L003_R1_001.fastq.gz 3540889062 FASTQ NA e7e4ca7f-fb5c-46cc-808e-d12de9a0bf50 35aa2d5983f4681549daf407deedb456 NA Primary Tumor C3N-03756.RNA-Seq.R2.T C3N-03756 GBM RNA-Seq tumor CPT0248110009 200518_UNC32-K00270_0247_AHH573BBXY_AGTTCAGG-CCAACAGA_S26_L003_R2_001.fastq.gz 4271619467 FASTQ NA d5a6f477-3888-416d-bbe8-c6110091e40e 7b582c55da00b403970b29128324978c NA Primary Tumor C3N-03756.WGS.N C3N-03756 GBM WGS blood_normal CPT0248150002 CPT0248150002.WholeGenome.RP-2158.bam 21131293979 BAM NA 1cd96b5e-db11-4c2d-a9b2-d768a15a1cdb 4dc37405ba4c2e374fbc5269d2f20d53 hg19 Blood Derived Normal +C3N-03756.WGS.N.hg38 C3N-03756 GBM WGS blood_normal CPT0248150002 66e454ec-e406-4636-ac39-6f866a915a54_wgs_gdc_realn.bam 62889344302 BAM NA e7091cde-15c0-427a-ab8c-f4260501dd7d 8489814decfa6167c8954159f5e422f2 hg38 Blood Derived Normal C3N-03756.WGS.T C3N-03756 GBM WGS tumor CPT0248110006 CPT0248110006.WholeGenome.RP-2158.bam 26962179175 BAM NA 3ef22001-f398-4ea5-8f12-ee2e72f00c6d 12b0cda91ea1307d25d984d8ee465db9 hg19 Primary Tumor +C3N-03756.WGS.T.hg38 C3N-03756 GBM WGS tumor CPT0248110006 9ff900ed-184e-485a-a302-8547b3370e49_wgs_gdc_realn.bam 79817657270 BAM NA 2312a271-58c8-4e5f-a6eb-702e901ea6fc ba8acc4e7d09f0da180e0d5a02c3e0c7 hg38 Primary Tumor C3N-03756.WXS.N C3N-03756 GBM WXS blood_normal CPT0248150002 CPT0248150002.WholeExome.RP-1303.bam 19049399344 BAM NA e20215d6-865c-4277-b5e9-c5cbcbc9fbd7 74e9bec673308192b1626205176eeb43 hg19 Blood Derived Normal C3N-03756.WXS.T C3N-03756 GBM WXS tumor CPT0248110006 CPT0248110006.WholeExome.RP-1303.bam 22753080992 BAM NA 49daf6bc-00a0-493f-af83-b36bae5c0390 5765a6a995b4f8e4862e89949658047a hg19 Primary Tumor C3N-03757.MethArray.Green.T C3N-03757 GBM Methylation Array tumor CPT0248040006 204367470127_R03C01_Grn.idat 13677890 IDAT Green df652ab7-6975-4599-99ab-5939111f7247 dd5c4ab424e6f96991b80ce6b9ac0745 NA Primary Tumor C3N-03757.MethArray.Red.T C3N-03757 GBM Methylation Array tumor CPT0248040006 204367470127_R03C01_Red.idat 13677890 IDAT Red 221b8a7f-9dd8-4267-9507-71f710d09832 68ad245cdeb70a1eb4ca4e33434fd503 NA Primary Tumor C3N-03757.miRNA-Seq.T C3N-03757 GBM miRNA-Seq tumor CPT0248040009 200403_UNC31-K00269_0274_AHCF7GBBXY_CAGATC_S31_L002_R1_001.unaln.bam 223881370 BAM NA 0e40ba4c-ff44-476b-90d5-1b994bcb16be 174e2b21c1b0a33102b94fa231f9297e NA Primary Tumor +C3N-03757.miRNA-Seq.T.hg38 C3N-03757 GBM miRNA-Seq tumor CPT0248040009 cd63d63e-0b6e-4e86-96bc-f5168390c5e4_mirnaseq_gdc_realn.bam 248543913 BAM NA 5eaa3845-65e0-4267-a04f-2514b3166463 2b51fae08dba9ac803337fb0c8ef4c0f hg38 Primary Tumor C3N-03757.RNA-Seq.R1.T C3N-03757 GBM RNA-Seq tumor CPT0248040009 200218_UNC31-K00269_0266_AHGKHKBBXY_CAAGCTAG-ACATAGCG_S59_L006_R1_001.fastq.gz 5283446961 FASTQ NA 4a00f13f-802b-479a-9c10-208b3158248a 8e10728c639d1fad5884770ad5fb33d9 NA Primary Tumor C3N-03757.RNA-Seq.R2.T C3N-03757 GBM RNA-Seq tumor CPT0248040009 200218_UNC31-K00269_0266_AHGKHKBBXY_CAAGCTAG-ACATAGCG_S59_L006_R2_001.fastq.gz 5903094218 FASTQ NA 973c3d9c-0686-4288-a83d-725e7d2d0488 d9c65c130c0f72548cbd93bf5f9c029d NA Primary Tumor C3N-03757.WGS.N C3N-03757 GBM WGS blood_normal CPT0248070002 CPT0248070002.WholeGenome.RP-2158.bam 24748606890 BAM NA bcc3251e-5b36-4ca6-bac9-212dd4dd5d9a 2a0748c11f3db41deb1d479a6f903e0f hg19 Blood Derived Normal +C3N-03757.WGS.N.hg38 C3N-03757 GBM WGS blood_normal CPT0248070002 8d894511-5d1c-4e1d-9276-2652042bb730_wgs_gdc_realn.bam 74844179183 BAM NA 8bbe506e-60c3-4df6-af3d-f7713d49b0dc 57f11f8c6528f5b1bdfc812ee89bb361 hg38 Blood Derived Normal C3N-03757.WGS.T C3N-03757 GBM WGS tumor CPT0248040006 CPT0248040006.WholeGenome.RP-2158.bam 21315382528 BAM NA 412452bc-414e-4ffc-aa7b-af95b5e0dabc 70eb73fe2a7599529b2ec7bdb9434d27 hg19 Primary Tumor +C3N-03757.WGS.T.hg38 C3N-03757 GBM WGS tumor CPT0248040006 fa002608-faaf-4aa1-8594-0146105e9048_wgs_gdc_realn.bam 63162009480 BAM NA b5398b66-5b43-4f83-a30a-21db3a30b5e9 926fc0fce287690bebb786bf88a15837 hg38 Primary Tumor C3N-03757.WXS.N C3N-03757 GBM WXS blood_normal CPT0248070002 CPT0248070002.WholeExome.RP-1303.bam 22962780889 BAM NA d167d275-86d1-4c8a-bee2-8b8adea4945f c90589826cdb855ea9258db5609f43dd hg19 Blood Derived Normal C3N-03757.WXS.T C3N-03757 GBM WXS tumor CPT0248040006 CPT0248040006.WholeExome.RP-1303.bam 21692557413 BAM NA fb48e7ec-37d9-4788-94c2-eb9a5adbc31a 881fb57ba5ddb5ce3060ea5dbe527ca8 hg19 Primary Tumor C3N-03762.MethArray.Green.A C3N-03762 LSCC Methylation Array tissue_normal CPT0247250006 204367490057_R04C01_Grn.idat 13677905 IDAT Green 45ab3c1a-6a7a-4b64-9cde-9392b724af6c c4deb8659786f96f1619a16587babef5 NA Solid Tissue Normal @@ -30079,13 +30589,17 @@ C3N-03762.MethArray.Green.T C3N-03762 LSCC Methylation Array tumor CPT0247240006 C3N-03762.MethArray.Red.A C3N-03762 LSCC Methylation Array tissue_normal CPT0247250006 204367490057_R04C01_Red.idat 13677905 IDAT Red e201fa33-12fb-4062-bdde-778144668082 93bfc45f6a1aa4d35e9738c82f9b9f83 NA Solid Tissue Normal C3N-03762.MethArray.Red.T C3N-03762 LSCC Methylation Array tumor CPT0247240006 204367470131_R04C01_Red.idat 13677880 IDAT Red 939af771-835e-4e78-8b65-ae7bf1bbc944 7f650951ba51f817c3b0e18c45b46196 NA Primary Tumor C3N-03762.miRNA-Seq.A C3N-03762 LSCC miRNA-Seq tissue_normal CPT0247250009 200325_UNC31-K00269_0272_AHHC2NBBXY_CACGAT_S7_L001_R1_001.unaln.bam 329110114 BAM NA 980b4850-bd6b-4085-8d83-ad08a467a759 0d8a55a61ecd29dd383a5c8f04a6338e NA Solid Tissue Normal +C3N-03762.miRNA-Seq.A.hg38 C3N-03762 LSCC miRNA-Seq tissue_normal CPT0247250009 9cb853a3-c3af-46cb-bcf1-84962b366419_mirnaseq_gdc_realn.bam 357051636 BAM NA 5cb067e1-3d7f-47a6-b5d3-ac4444c83c40 6bb9abe7d6dd9ce932dce129c0495377 hg38 Solid Tissue Normal C3N-03762.miRNA-Seq.T C3N-03762 LSCC miRNA-Seq tumor CPT0247240009 200224_UNC31-K00269_0267_AHC722BBXY_ACAGTG_S5_L008_R1_001.unaln.bam 256720337 BAM NA f5b5c460-b34c-4c0d-8783-ccf4e3ad6bba 33f7a6d0752596f921d1ee6553453748 NA Primary Tumor +C3N-03762.miRNA-Seq.T.hg38 C3N-03762 LSCC miRNA-Seq tumor CPT0247240009 851089c1-577f-446d-83fd-df501d1f89d7_mirnaseq_gdc_realn.bam 283692596 BAM NA d7c7db8d-2148-41ea-a277-d45cebb56298 6df4c42f38ce1568826171d81b721c43 hg38 Primary Tumor C3N-03762.RNA-Seq.R1.A C3N-03762 LSCC RNA-Seq tissue_normal CPT0247250009 200428_UNC31-K00269_0275_AHGCJVBBXY_ACAGGCGC-CTCTGCCT_S15_L004_R1_001.fastq.gz 4073473721 FASTQ NA 2d8aace6-dfbe-405a-a72d-0e7aad158a73 9e91b5ca4abf9c34a9df1216eb622ae4 NA Solid Tissue Normal C3N-03762.RNA-Seq.R1.T C3N-03762 LSCC RNA-Seq tumor CPT0247240009 200505_UNC32-K00270_0245_AHH5FVBBXY_ATCCACTG-AGGTGCGT_S5_L002_R1_001.fastq.gz 3340458440 FASTQ NA eedce802-aab1-49aa-9611-c3a4f3b214b7 51b51b9bf5e15ece7db6b66efaf4c99b NA Primary Tumor C3N-03762.RNA-Seq.R2.A C3N-03762 LSCC RNA-Seq tissue_normal CPT0247250009 200428_UNC31-K00269_0275_AHGCJVBBXY_ACAGGCGC-CTCTGCCT_S15_L004_R2_001.fastq.gz 4341685544 FASTQ NA 1c6eaab0-e5b4-43e4-92c0-cc63d9ea92e8 e548606f23b2c83bbff8e1177d6d3682 NA Solid Tissue Normal C3N-03762.RNA-Seq.R2.T C3N-03762 LSCC RNA-Seq tumor CPT0247240009 200505_UNC32-K00270_0245_AHH5FVBBXY_ATCCACTG-AGGTGCGT_S5_L002_R2_001.fastq.gz 3596102940 FASTQ NA 60ece175-202c-4e59-bab5-3acbc69cc22d 3bb00cef5a52ef615aadcee48ed97303 NA Primary Tumor C3N-03762.WGS.N C3N-03762 LSCC WGS blood_normal CPT0247280008 CPT0247280008.WholeGenome.RP-2158.bam 24860619632 BAM NA 85fcd93a-688b-402c-8e14-9217d80e090a 217703e1535fa4de4337728271e998c8 hg19 Blood Derived Normal +C3N-03762.WGS.N.hg38 C3N-03762 LSCC WGS blood_normal CPT0247280008 f8c7c04c-bf1e-4a8c-9d49-d43de0279a39_wgs_gdc_realn.bam 75682384584 BAM NA 83a064b6-a934-408d-93ee-ab41545c75c5 77b00fa54e38d16c99d2d5609a8c5952 hg38 Blood Derived Normal C3N-03762.WGS.T C3N-03762 LSCC WGS tumor CPT0247240006 CPT0247240006.WholeGenome.RP-2158.bam 22764221099 BAM NA 32fd25df-344a-464d-8c7c-0bafe85055ec 0257f8fa5c697a3bec7e5f7a907328e4 hg19 Primary Tumor +C3N-03762.WGS.T.hg38 C3N-03762 LSCC WGS tumor CPT0247240006 a5fe587b-8a3a-411a-99cd-d07dbade113f_wgs_gdc_realn.bam 68324474453 BAM NA 959ede3b-d2ab-4799-ad2f-e1e146acf67b aa7c2e61ae2b5a3402102e2efb068ba4 hg38 Primary Tumor C3N-03762.WXS.A C3N-03762 LSCC WXS tissue_normal CPT0247250006 CPT0247250006.WholeExome.RP-1303.bam 24695291830 BAM NA b0b166af-f23e-4c08-8725-f9e85e744246 5f702ddc32f11f844735bf54e7b9186e hg19 Solid Tissue Normal C3N-03762.WXS.N C3N-03762 LSCC WXS blood_normal CPT0247280008 CPT0247280008.WholeExome.RP-1303.bam 22781704561 BAM NA 0ca29e67-33ac-47d4-a069-39a19e0409e0 ba1c1b2eaecacbd4bf0586fbdbbaf67c hg19 Blood Derived Normal C3N-03762.WXS.T C3N-03762 LSCC WXS tumor CPT0247240006 CPT0247240006.WholeExome.RP-1303.bam 23013134639 BAM NA 2ceb8166-fcd6-4f52-83a4-c5cdc2ad49fb a0802332dcb471d68f074d60069e5312 hg19 Primary Tumor @@ -30282,51 +30796,69 @@ C3N-03785.WXS.T.hg38 C3N-03785 HNSCC WXS tumor CPT0245680006 58d9cb22-cc39-4db7- C3N-03789.MethArray.Green.T C3N-03789 GBM Methylation Array tumor CPT0244860006 204372030022_R06C01_Grn.idat 13677905 IDAT Green 36949622-9245-4639-adbb-5d3825974411 b2699c6a827038d7e364e088d58b08b0 NA Primary Tumor C3N-03789.MethArray.Red.T C3N-03789 GBM Methylation Array tumor CPT0244860006 204372030022_R06C01_Red.idat 13677905 IDAT Red 801da269-0c53-48e6-9335-e70300569747 4458434e8c9e1e9ee42b9674d717f239 NA Primary Tumor C3N-03789.miRNA-Seq.T C3N-03789 GBM miRNA-Seq tumor CPT0244860009 200403_UNC31-K00269_0274_AHCF7GBBXY_TTAGGC_S27_L002_R1_001.unaln.bam 225451718 BAM NA b660df27-cdb3-4bb7-960c-cd23e8296233 ff52890e8305588e649255f692288db9 NA Primary Tumor +C3N-03789.miRNA-Seq.T.hg38 C3N-03789 GBM miRNA-Seq tumor CPT0244860009 534a589d-dc25-4c71-85fc-d65334cd27ea_mirnaseq_gdc_realn.bam 249583825 BAM NA 11545c89-0bfc-4d34-adcb-c5ad211f73f2 27ddc12b2ad3a7604b1eae155f39dfa1 hg38 Primary Tumor C3N-03789.RNA-Seq.R1.T C3N-03789 GBM RNA-Seq tumor CPT0244860009 200218_UNC31-K00269_0266_AHGKHKBBXY_GGACTTGG-CGCAGACG_S58_L006_R1_001.fastq.gz 4214876403 FASTQ NA de40a9c3-603d-44e2-a76e-9b4a98d3f482 885cf101d94c47ab398d0a77b062ba57 NA Primary Tumor C3N-03789.RNA-Seq.R2.T C3N-03789 GBM RNA-Seq tumor CPT0244860009 200218_UNC31-K00269_0266_AHGKHKBBXY_GGACTTGG-CGCAGACG_S58_L006_R2_001.fastq.gz 4685616893 FASTQ NA 0f25e421-ff9d-41ab-bef9-2503901bdb40 8492a7c7df0b07c7410a3373f05e1322 NA Primary Tumor C3N-03789.WGS.N C3N-03789 GBM WGS blood_normal CPT0244880002 CPT0244880002.WholeGenome.RP-2158.bam 32902918385 BAM NA f5c73bfd-9555-4862-bdc0-e05493aa48fb 8be505ed8103b58a1d3b473b30a60c50 hg19 Blood Derived Normal +C3N-03789.WGS.N.hg38 C3N-03789 GBM WGS blood_normal CPT0244880002 d3ab454b-9464-48cf-abf5-4c8ab909b5c0_wgs_gdc_realn.bam 100034438784 BAM NA c300354a-780b-4904-91d1-54e08b324a01 ac8e480fdfec3292c6bd2d26777f821b hg38 Blood Derived Normal C3N-03789.WGS.T C3N-03789 GBM WGS tumor CPT0244860006 CPT0244860006.WholeGenome.RP-2158.bam 21896768790 BAM NA 8ecd6587-05f6-42d4-b7a5-bd592a8ecef5 702a7d0055057a49f9dd5e7008888e66 hg19 Primary Tumor +C3N-03789.WGS.T.hg38 C3N-03789 GBM WGS tumor CPT0244860006 81c4a568-2fb2-44a1-b5cd-0654380d459a_wgs_gdc_realn.bam 62404522107 BAM NA 5e036af9-a3a3-48ed-ab3e-5d5406e9b91f b543525ac07e2a30d52b39ca79c4a6a7 hg38 Primary Tumor C3N-03789.WXS.N C3N-03789 GBM WXS blood_normal CPT0244880002 CPT0244880002.WholeExome.RP-1303.bam 24719484242 BAM NA f1de1731-390b-499e-8c2b-25add41d85e8 1acdcffffdf3d3d7ab5086fae3a6e337 hg19 Blood Derived Normal C3N-03789.WXS.T C3N-03789 GBM WXS tumor CPT0244860006 CPT0244860006.WholeExome.RP-1303.bam 18044673025 BAM NA e5dbc9e9-c152-4944-83a8-74e70f97e3d6 804ca1e0e52fc5eb43db3db490d697d0 hg19 Primary Tumor C3N-03791.MethArray.Green.T C3N-03791 GBM Methylation Array tumor CPT0248160007 204367490061_R02C01_Grn.idat 13677885 IDAT Green 4ee7dfa7-abdb-49a9-b60d-7a485079aa3e 819654387b42730425a76e97906cfa7b NA Primary Tumor C3N-03791.MethArray.Red.T C3N-03791 GBM Methylation Array tumor CPT0248160007 204367490061_R02C01_Red.idat 13677885 IDAT Red fa4361ca-a50e-4b54-9184-70aeb4ff399e cac71cd107673a14bc856f8017dab04f NA Primary Tumor C3N-03791.miRNA-Seq.T C3N-03791 GBM miRNA-Seq tumor CPT0248160010 200403_UNC31-K00269_0274_AHCF7GBBXY_TAGCTT_S34_L002_R1_001.unaln.bam 211919722 BAM NA c7ef9ccf-ea0f-4031-a4ba-e3ba563aa40d ef97f7ca01896cc149c083d9fbbea688 NA Primary Tumor +C3N-03791.miRNA-Seq.T.hg38 C3N-03791 GBM miRNA-Seq tumor CPT0248160010 0b734a68-df90-40a5-8f66-54703e80d84c_mirnaseq_gdc_realn.bam 234465379 BAM NA fd2bd498-1128-45d6-9d50-b1cd46a7690f 5d659a786d1fb7aa021c9a6abeda814f hg38 Primary Tumor C3N-03791.RNA-Seq.R1.T C3N-03791 GBM RNA-Seq tumor CPT0248160010 200204_UNC31-K00269_0263_AHG2CJBBXY_GACCTGAA-TTGGTGAG_S2_L001_R1_001.fastq.gz 3230332173 FASTQ NA 278403a7-7c34-4b9e-97d5-98df7b34b730 7a8bbaed21fdf9861045ff00de5b66c9 NA Primary Tumor C3N-03791.RNA-Seq.R2.T C3N-03791 GBM RNA-Seq tumor CPT0248160010 200204_UNC31-K00269_0263_AHG2CJBBXY_GACCTGAA-TTGGTGAG_S2_L001_R2_001.fastq.gz 3886086941 FASTQ NA e0f0a291-d112-4eac-affa-355d24b03424 cf3d615df0f2b5f6c1e6b9cde957dbd7 NA Primary Tumor C3N-03791.WGS.N C3N-03791 GBM WGS blood_normal CPT0248220002 CPT0248220002.WholeGenome.RP-2158.bam 26498624553 BAM NA 3ba6512e-5785-4e32-bce6-13f8b80aad3a 7a926e3c57879ea3f616ed361b6606ad hg19 Blood Derived Normal +C3N-03791.WGS.N.hg38 C3N-03791 GBM WGS blood_normal CPT0248220002 2b68f934-9910-4dc6-adc3-1cf82764a7a0_wgs_gdc_realn.bam 74021298457 BAM NA dbb9edea-f9d6-4add-b71f-a6229f36db20 99d38b70852f3893163262003da66183 hg38 Blood Derived Normal C3N-03791.WGS.T C3N-03791 GBM WGS tumor CPT0248160007 CPT0248160007.WholeGenome.RP-2158.bam 21814922440 BAM NA e8b7da1d-caf4-465b-871e-bd7d05cbc406 45206d11406eeeb9a7d1093a8edb4517 hg19 Primary Tumor +C3N-03791.WGS.T.hg38 C3N-03791 GBM WGS tumor CPT0248160007 a12853e7-7ad9-40e5-a71a-b50c18db7465_wgs_gdc_realn.bam 64319191270 BAM NA 9d67076c-f460-4452-b785-b2aa0e0ae8df 3ec471309e74bf8cec836fc07bcf8560 hg38 Primary Tumor C3N-03791.WXS.N C3N-03791 GBM WXS blood_normal CPT0248220002 CPT0248220002.WholeExome.RP-1303.bam 33064684299 BAM NA d1b09246-acf2-42d0-9183-c449f8a30275 34dddf66eecfdae246f3fd63ed8d60af hg19 Blood Derived Normal C3N-03791.WXS.T C3N-03791 GBM WXS tumor CPT0248160007 CPT0248160007.WholeExome.RP-1303.bam 20778146670 BAM NA 8db33fa4-0c4d-4d3a-bb9e-843f5d15f771 4e975d1938dcb9509fb5549017504b16 hg19 Primary Tumor C3N-03797.MethArray.Green.T C3N-03797 GBM Methylation Array tumor CPT0285180007 204367470127_R02C01_Grn.idat 13677892 IDAT Green 2ce08812-ff06-4a1f-958d-652569e29da1 d695e3e3ba532865b1a2178a66d55072 NA Primary Tumor C3N-03797.MethArray.Red.T C3N-03797 GBM Methylation Array tumor CPT0285180007 204367470127_R02C01_Red.idat 13677892 IDAT Red 95850a31-5aff-402d-bbf2-dc2477ef5d54 5736191af39a7966368b996ce6130960 NA Primary Tumor C3N-03797.miRNA-Seq.T C3N-03797 GBM miRNA-Seq tumor CPT0285180013 200403_UNC31-K00269_0274_AHCF7GBBXY_TATAAT_S20_L001_R1_001.unaln.bam 232799984 BAM NA 83d7e3cc-9300-442b-8d38-4359db921f46 a0e1bbf76c3a11bf8c58a26939b0c577 NA Primary Tumor +C3N-03797.miRNA-Seq.T.hg38 C3N-03797 GBM miRNA-Seq tumor CPT0285180013 bb234d6a-efd6-4e21-ac76-757818f99f98_mirnaseq_gdc_realn.bam 251406345 BAM NA 24ac0596-02b4-4e6f-be96-aca82d40294f 9d09f3c2af288eebb19b1b710cf2f713 hg38 Primary Tumor C3N-03797.RNA-Seq.R1.T C3N-03797 GBM RNA-Seq tumor CPT0285180013 200129_UNC31-K00269_0261_AHG2CLBBXY_GGAGCGTC-GTCCGTGC_S4_L004_R1_001.fastq.gz 2749145746 FASTQ NA ed5077a5-706a-4d83-a70f-6ec809c30895 d368f649f1a0eaf81a5e439a3ac25d08 NA Primary Tumor C3N-03797.RNA-Seq.R2.T C3N-03797 GBM RNA-Seq tumor CPT0285180013 200129_UNC31-K00269_0261_AHG2CLBBXY_GGAGCGTC-GTCCGTGC_S4_L004_R2_001.fastq.gz 3139697205 FASTQ NA 4e0d0413-eaf2-4b81-9784-5f28d36b9eb3 73746e532f724f0f9cf7042b01af74a4 NA Primary Tumor C3N-03797.WGS.N C3N-03797 GBM WGS blood_normal CPT0285210002 CPT0285210002.WholeGenome.RP-2158.bam 35420074575 BAM NA c55e1798-2951-4cf7-abe0-790e9cb25eeb 9eb84ab8cbb2de729d29a4e3634be507 hg19 Blood Derived Normal +C3N-03797.WGS.N.hg38 C3N-03797 GBM WGS blood_normal CPT0285210002 966c6951-4f60-4deb-8ffe-9c5954afab8e_wgs_gdc_realn.bam 109141152803 BAM NA c8df50e5-603b-4afa-987d-53514939e122 c0ecff19fd3602fa2b85e5c976b2ee1d hg38 Blood Derived Normal C3N-03797.WGS.T C3N-03797 GBM WGS tumor CPT0285180007 CPT0285180007.WholeGenome.RP-2158.bam 22181936172 BAM NA 496997c1-269b-4d43-9b29-26a24935dc5e 5d4c9b29feecffd081bfc429a5fad227 hg19 Primary Tumor +C3N-03797.WGS.T.hg38 C3N-03797 GBM WGS tumor CPT0285180007 422a6465-56ff-4265-bb86-43cf4b882e46_wgs_gdc_realn.bam 65793765773 BAM NA 9ef14794-ec5b-4756-b14e-78e0a5b5f791 4738c9b04a1da07c9de51922668aa191 hg38 Primary Tumor C3N-03797.WXS.N C3N-03797 GBM WXS blood_normal CPT0285210002 CPT0285210002.WholeExome.RP-1303.bam 27620467859 BAM NA 22d5c16f-aa32-42b0-bb46-b17b6a5d1d0f 205ea2d207428c31a8f76b7046847138 hg19 Blood Derived Normal C3N-03797.WXS.T C3N-03797 GBM WXS tumor CPT0285180007 CPT0285180007.WholeExome.RP-1303.bam 19212444149 BAM NA 185a06c7-ad16-4f79-9c1c-199ba99f7bcb 6b978ad5c155ed0b3b50f5c0098ed955 hg19 Primary Tumor C3N-03800.MethArray.Green.T C3N-03800 GBM Methylation Array tumor CPT0285220006 204372030011_R02C01_Grn.idat 13677890 IDAT Green 72234503-3f55-4224-8a74-f4552cd4a8ea a3dd5f308a98e0cb92114e9d1c4f203e NA Primary Tumor C3N-03800.MethArray.Red.T C3N-03800 GBM Methylation Array tumor CPT0285220006 204372030011_R02C01_Red.idat 13677890 IDAT Red e909c3bc-d014-4596-aa0a-ee0c815a6aaa 4dbb7606fed65e267b928ba47f2a7dac NA Primary Tumor C3N-03800.miRNA-Seq.T C3N-03800 GBM miRNA-Seq tumor CPT0285220009 200403_UNC31-K00269_0274_AHCF7GBBXY_CATGGC_S10_L001_R1_001.unaln.bam 227672680 BAM NA 91e5c405-fb73-4322-b077-c2ee020debeb a4eb3caf4804ee66eb18af1ad5721209 NA Primary Tumor +C3N-03800.miRNA-Seq.T.hg38 C3N-03800 GBM miRNA-Seq tumor CPT0285220009 e4d4f4aa-b06c-4b4c-b6ec-49b28f16ad90_mirnaseq_gdc_realn.bam 249300125 BAM NA 62cde963-7d9c-42c2-a937-4aa15ca5eb2c 36b8e4dcda888ee9e79d71d8af75c43e hg38 Primary Tumor C3N-03800.RNA-Seq.R1.T C3N-03800 GBM RNA-Seq tumor CPT0285220009 200204_UNC31-K00269_0263_AHG2CJBBXY_CGTTAGAA-TTCAGGTC_S26_L007_R1_001.fastq.gz 3213517172 FASTQ NA a6980cb7-4d87-452d-ace8-f2419ef4d665 e5a36974625fcaa1574073eaadcef995 NA Primary Tumor C3N-03800.RNA-Seq.R2.T C3N-03800 GBM RNA-Seq tumor CPT0285220009 200204_UNC31-K00269_0263_AHG2CJBBXY_CGTTAGAA-TTCAGGTC_S26_L007_R2_001.fastq.gz 3740273114 FASTQ NA 9082c1c1-5abd-4a0e-8f6e-750b5dff16e8 9a8d15f812faccb1b08f3b0d29e38b05 NA Primary Tumor C3N-03800.WGS.N C3N-03800 GBM WGS blood_normal CPT0285250002 CPT0285250002.WholeGenome.RP-2158.bam 25301880952 BAM NA bc71a97b-75d5-48b8-a5e2-a91bf65f43df 7f673a599cb0ffd0a0f13c2bd045c2b5 hg19 Blood Derived Normal +C3N-03800.WGS.N.hg38 C3N-03800 GBM WGS blood_normal CPT0285250002 74161594-9926-4852-9bef-076363ce5266_wgs_gdc_realn.bam 75210206981 BAM NA c6e99476-96a8-4730-89ef-026f274e9488 ff8463a5b7fe6934eba67313c65dfbfe hg38 Blood Derived Normal C3N-03800.WGS.T C3N-03800 GBM WGS tumor CPT0285220006 CPT0285220006.WholeGenome.RP-2158.bam 26028547154 BAM NA c7aec4a6-89a7-4e53-a246-d7c5fe230c7f c70782de695d9fb2803d8c4a55154d3e hg19 Primary Tumor +C3N-03800.WGS.T.hg38 C3N-03800 GBM WGS tumor CPT0285220006 27ccdf5d-88bc-4b87-be27-161ef297a99d_wgs_gdc_realn.bam 77812358866 BAM NA 24e3c427-04e9-489a-bbf6-4015af0f9693 18291a119b44daf422c02d4a144708ee hg38 Primary Tumor C3N-03800.WXS.N C3N-03800 GBM WXS blood_normal CPT0285250002 CPT0285250002.WholeExome.RP-1303.bam 32100575262 BAM NA eb18f6f1-7305-4017-baa1-befeb8540b17 a42f8eed89642a8da59c86379d8542c2 hg19 Blood Derived Normal C3N-03800.WXS.T C3N-03800 GBM WXS tumor CPT0285220006 CPT0285220006.WholeExome.RP-1303.bam 24942224435 BAM NA 21a8209e-d06c-4f45-a068-364e6a2215e4 5ccfbea5d3b36ac197316b86796fbf29 hg19 Primary Tumor C3N-03802.miRNA-Seq.T C3N-03802 GBM miRNA-Seq tumor CPT0285260009 200403_UNC31-K00269_0274_AHCF7GBBXY_CATTTT_S11_L001_R1_001.unaln.bam 268580490 BAM NA f7d03e56-e8df-4d26-a669-966b95205b69 ed841d0243324dd55ef11873eaf967bd NA Primary Tumor +C3N-03802.miRNA-Seq.T.hg38 C3N-03802 GBM miRNA-Seq tumor CPT0285260009 39665888-ab29-4c21-9429-f4ad8cca7352_mirnaseq_gdc_realn.bam 301143625 BAM NA a46ceaa3-5238-4715-a632-3cb7851204df 84b32c58146c4b38cd1c48a28c2eb4a8 hg38 Primary Tumor C3N-03802.RNA-Seq.R1.T C3N-03802 GBM RNA-Seq tumor CPT0285260009 200204_UNC31-K00269_0263_AHG2CJBBXY_AGCCTCAT-AGTAGAGA_S27_L007_R1_001.fastq.gz 3772884953 FASTQ NA 255a8e1c-dc69-4ec7-a76f-1877b51b4f23 b0a7c76277d6adc6cb0ec59607e40ee6 NA Primary Tumor C3N-03802.RNA-Seq.R2.T C3N-03802 GBM RNA-Seq tumor CPT0285260009 200204_UNC31-K00269_0263_AHG2CJBBXY_AGCCTCAT-AGTAGAGA_S27_L007_R2_001.fastq.gz 4271333174 FASTQ NA f86f26d6-0c6b-4120-b71f-4fd632f2ec9c 46cbf58d39d0711362c538637932909c NA Primary Tumor C3N-03802.WGS.N C3N-03802 GBM WGS blood_normal CPT0280960002 CPT0280960002.WholeGenome.RP-2158.bam 24435679576 BAM NA 34fbd34a-ba89-4557-a705-0ced6d0cb40d 28a44f5f957c7a011ddf6e7a9bfbe06e hg19 Blood Derived Normal +C3N-03802.WGS.N.hg38 C3N-03802 GBM WGS blood_normal CPT0280960002 21f596c1-4a26-44b2-8c1b-4697d7884d6f_wgs_gdc_realn.bam 70976473049 BAM NA d5ac4339-e870-47cf-99c4-4c305dfbcae8 59a26ed57e48b264f26e2ad6976d4c9a hg38 Blood Derived Normal C3N-03802.WGS.T C3N-03802 GBM WGS tumor CPT0285260006 CPT0285260006.WholeGenome.RP-2158.bam 31983690940 BAM NA a04948ca-045f-407f-9740-559e4f672f82 053041f7537d16320cc9ed9fb935300a hg19 Primary Tumor +C3N-03802.WGS.T.hg38 C3N-03802 GBM WGS tumor CPT0285260006 dbd9368c-c526-4f91-b575-85678ca920d4_wgs_gdc_realn.bam 98847773464 BAM NA 14a6db1a-bd53-439a-9fe3-850628f370de 7b46d2004f77d6ae3e0e9be46991e5bf hg38 Primary Tumor C3N-03802.WXS.N C3N-03802 GBM WXS blood_normal CPT0280960002 CPT0280960002.WholeExome.RP-1303.bam 31107793425 BAM NA eaf57764-4a59-4b7c-b752-6b47d9dadb10 9706a9de8a82dfd0e8dbe291e0e33920 hg19 Blood Derived Normal C3N-03802.WXS.T C3N-03802 GBM WXS tumor CPT0285260006 CPT0285260006.WholeExome.RP-1303.bam 28080869995 BAM NA db174c32-951d-458b-9230-6b8ed2d3283a c0ccd28d7a185f933dff4279a0de8a31 hg19 Primary Tumor C3N-03810.miRNA-Seq.T C3N-03810 GBM miRNA-Seq tumor CPT0285300009 200403_UNC31-K00269_0274_AHCF7GBBXY_CCAACA_S12_L001_R1_001.unaln.bam 232539673 BAM NA 5c539aec-8211-452a-9eac-e95a863225db b4eec004d08918547749156c9a8ee684 NA Primary Tumor +C3N-03810.miRNA-Seq.T.hg38 C3N-03810 GBM miRNA-Seq tumor CPT0285300009 cfb72048-a42f-4dab-aa46-f58122a9257a_mirnaseq_gdc_realn.bam 257461966 BAM NA bdf12979-375d-45de-bb02-d9cc3c93ddb4 494c7ddf751236c7db354a7ea386e14f hg38 Primary Tumor C3N-03810.RNA-Seq.R1.T C3N-03810 GBM RNA-Seq tumor CPT0285300009 200204_UNC31-K00269_0263_AHG2CJBBXY_GATTCTGC-GACGAGAG_S28_L007_R1_001.fastq.gz 3007935186 FASTQ NA 8fbe432e-3582-4d23-ae52-931b334f2112 7ce943248cb178104c31b5b6fcbc5b44 NA Primary Tumor C3N-03810.RNA-Seq.R2.T C3N-03810 GBM RNA-Seq tumor CPT0285300009 200204_UNC31-K00269_0263_AHG2CJBBXY_GATTCTGC-GACGAGAG_S28_L007_R2_001.fastq.gz 3415547135 FASTQ NA c9bb314d-81a3-4b4a-b3c8-935f7db8d048 ca24c94d1f399d3a988e280690b67547 NA Primary Tumor C3N-03810.WGS.N C3N-03810 GBM WGS blood_normal CPT0285330002 CPT0285330002.WholeGenome.RP-2158.bam 23111061366 BAM NA 2e2c679f-7b26-4015-b244-45267471f2e2 583735d6fb9f3ff6ae6165c48a6602c9 hg19 Blood Derived Normal +C3N-03810.WGS.N.hg38 C3N-03810 GBM WGS blood_normal CPT0285330002 ca49ed01-ced5-4674-95c9-b77361506dbc_wgs_gdc_realn.bam 70217504692 BAM NA 4f081684-661c-4114-87e5-3ea5943244f4 7e406f1fc1cb5552f9b4498f62a6398b hg38 Blood Derived Normal C3N-03810.WGS.T C3N-03810 GBM WGS tumor CPT0285300006 CPT0285300006.WholeGenome.RP-2158.bam 28905896477 BAM NA 1ea41311-ec81-4ccb-b505-ffe1817637e1 c07f6d3bd529760c08cb9cbd4a035ebf hg19 Primary Tumor +C3N-03810.WGS.T.hg38 C3N-03810 GBM WGS tumor CPT0285300006 cd3a6bd9-59f6-4fa4-91bb-46d54ca06db9_wgs_gdc_realn.bam 86575296711 BAM NA 7a8a0945-b68b-403f-8883-e04140b8e788 a007efe13045aee595530d1a2350e2f6 hg38 Primary Tumor C3N-03810.WXS.N C3N-03810 GBM WXS blood_normal CPT0285330002 CPT0285330002.WholeExome.RP-1303.bam 28716333027 BAM NA e44cb506-57f9-4b12-be9a-cc049696d254 5b6fdc2f477f57c0016e64bfbed4465d hg19 Blood Derived Normal C3N-03810.WXS.T C3N-03810 GBM WXS tumor CPT0285300006 CPT0285300006.WholeExome.RP-1303.bam 23403510103 BAM NA 62c4ac3a-788e-453e-b514-8fae7927b604 423545bc151a6ef1f87f746ffa26c7f9 hg19 Primary Tumor C3N-03837.MethArray.Green.T C3N-03837 HNSCC Methylation Array tumor CPT0236620006 203273200080_R05C01_Grn.idat 13676206 IDAT Green e4207f9a-79ad-4905-9b36-cbb3d342847f 6d092b141aa0ac6c61b6482220df4ca3 NA Primary Tumor @@ -30865,13 +31397,17 @@ C3N-03923.MethArray.Green.T C3N-03923 LSCC Methylation Array tumor CPT0256400006 C3N-03923.MethArray.Red.A C3N-03923 LSCC Methylation Array tissue_normal CPT0256410006 204372030072_R08C01_Red.idat 13677880 IDAT Red 5a897a9c-2417-42e5-a391-ba9a0224d4b7 b3cda4f87822b3f5de62abcafab67a4e NA Solid Tissue Normal C3N-03923.MethArray.Red.T C3N-03923 LSCC Methylation Array tumor CPT0256400006 204372030071_R06C01_Red.idat 13677890 IDAT Red f06641c6-cb4f-40b2-9156-d43d7aa64d03 dbcaa087f2172c63380c0f8518080e40 NA Primary Tumor C3N-03923.miRNA-Seq.A C3N-03923 LSCC miRNA-Seq tissue_normal CPT0256410009 200513_UNC31-K00269_0278_BHH7Y7BBXY_GGCTAC_S15_L007_R1_001.unaln.bam 255275659 BAM NA f09f422a-3c94-4a5e-b207-6cb65a08eb3c 782ccc0c4c050817b562975a66fc0960 NA Solid Tissue Normal +C3N-03923.miRNA-Seq.A.hg38 C3N-03923 LSCC miRNA-Seq tissue_normal CPT0256410009 e3adc27c-befd-4dd9-bcdd-ab2f292f450b_mirnaseq_gdc_realn.bam 289685102 BAM NA adbb2fb7-5245-4239-ad48-470a581284e0 d581b416706bd97cd0b6054a9ef8bbd8 hg38 Solid Tissue Normal C3N-03923.miRNA-Seq.T C3N-03923 LSCC miRNA-Seq tumor CPT0256400013 200513_UNC31-K00269_0278_BHH7Y7BBXY_GTGAAA_S19_L007_R1_001.unaln.bam 229732290 BAM NA 5cf50621-f395-4671-aafe-515f039a7b4f e83c931c872e86048e8c487f11c06fef NA Primary Tumor +C3N-03923.miRNA-Seq.T.hg38 C3N-03923 LSCC miRNA-Seq tumor CPT0256400013 6e4d0579-0295-48b1-af3c-b7b5279a15af_mirnaseq_gdc_realn.bam 257360022 BAM NA a4545431-007f-4335-a7bb-ea1fde57573f 0b4e31eab37ab0d08393306c030e2ed4 hg38 Primary Tumor C3N-03923.RNA-Seq.R1.A C3N-03923 LSCC RNA-Seq tissue_normal CPT0256410009 200505_UNC31-K00269_0277_AHGFKNBBXY_GATCTATC-ATGAGGCT_S11_L003_R1_001.fastq.gz 3205216925 FASTQ NA 57455e4c-b3e0-42e8-b777-7b62a4e7ee1c 7dc25e8c92dd7a54632ac0b94140a9d4 NA Solid Tissue Normal C3N-03923.RNA-Seq.R1.T C3N-03923 LSCC RNA-Seq tumor CPT0256400013 200505_UNC31-K00269_0277_AHGFKNBBXY_TTCCTGTT-AGTATCTT_S20_L005_R1_001.fastq.gz 4258161393 FASTQ NA 1472ec3e-ccbe-4215-96fe-fed9126c9492 f84f508a8faae228e311adc5d94643bc NA Primary Tumor C3N-03923.RNA-Seq.R2.A C3N-03923 LSCC RNA-Seq tissue_normal CPT0256410009 200505_UNC31-K00269_0277_AHGFKNBBXY_GATCTATC-ATGAGGCT_S11_L003_R2_001.fastq.gz 3557318303 FASTQ NA cbbe8629-44f7-4ad4-9386-0070b1995efe c103a56b60614a8574aac694649a040c NA Solid Tissue Normal C3N-03923.RNA-Seq.R2.T C3N-03923 LSCC RNA-Seq tumor CPT0256400013 200505_UNC31-K00269_0277_AHGFKNBBXY_TTCCTGTT-AGTATCTT_S20_L005_R2_001.fastq.gz 4751061138 FASTQ NA b0051816-8cfc-4fc9-bff8-e02a112a6740 bf076ecb443ecf800cb547b430234ec8 NA Primary Tumor C3N-03923.WGS.N C3N-03923 LSCC WGS blood_normal CPT0256500002 CPT0256500002.WholeGenome.RP-2158.bam 22952793307 BAM NA c1e957ff-ee81-4d7f-bc37-674de50806bc 9132c33222f896c8f20e05a1639de98e hg19 Blood Derived Normal +C3N-03923.WGS.N.hg38 C3N-03923 LSCC WGS blood_normal CPT0256500002 5b4a4a97-1ca6-43c7-ae59-d4de15fcbd74_wgs_gdc_realn.bam 68819258297 BAM NA d0933bbc-e62a-41b2-bd12-be1d63e53836 33d4e4f4bdfbcbfc62cd696e0ca787f8 hg38 Blood Derived Normal C3N-03923.WGS.T C3N-03923 LSCC WGS tumor CPT0256400006 CPT0256400006.WholeGenome.RP-2158.bam 22798062723 BAM NA 94131131-3a7c-437c-ac22-997e893751c2 08f681135fd003c5134499bb6b6b50ab hg19 Primary Tumor +C3N-03923.WGS.T.hg38 C3N-03923 LSCC WGS tumor CPT0256400006 3df344f8-a667-4995-baf0-ea7725ad0ea9_wgs_gdc_realn.bam 67557684957 BAM NA fdf76f02-3f94-4907-964d-b082cbb0af56 7a394152ec35ead3f64c4fb6c0f9320d hg38 Primary Tumor C3N-03923.WXS.A C3N-03923 LSCC WXS tissue_normal CPT0256410006 CPT0256410006.WholeExome.RP-1303.bam 22572298048 BAM NA 7d1cae39-ab67-4d63-86a1-cb25aecccbb5 03acd97467bd94003e1cbc61737f94ec hg19 Solid Tissue Normal C3N-03923.WXS.N C3N-03923 LSCC WXS blood_normal CPT0256500002 CPT0256500002.WholeExome.RP-1303.bam 26709559638 BAM NA d95b9ef8-98af-4dd9-8ad6-8f8964706d29 89b814a464c1a25dd3ea78e87815f337 hg19 Blood Derived Normal C3N-03923.WXS.T C3N-03923 LSCC WXS tumor CPT0256400006 CPT0256400006.WholeExome.RP-1303.bam 25512003165 BAM NA 849427c8-f58f-4ee0-98e3-b2ae43f8179e 8129b25534331b40c6ccb109a70d6794 hg19 Primary Tumor @@ -30962,73 +31498,99 @@ C3N-03933.WXS.T.hg38 C3N-03933 HNSCC WXS tumor CPT0220610006 3d5ad036-e95e-43e3- C3N-03935.MethArray.Green.T C3N-03935 GBM Methylation Array tumor CPT0285340006 204367490029_R01C01_Grn.idat 13677885 IDAT Green 207abe29-f504-4315-88df-c6b6a14c9427 57ac380e8e817fcbb102505d5b0677c6 NA Primary Tumor C3N-03935.MethArray.Red.T C3N-03935 GBM Methylation Array tumor CPT0285340006 204367490029_R01C01_Red.idat 13677885 IDAT Red 64108981-a48e-464f-9e82-4ee2c2ca448d 63527f45cc13a92708b3e7cce3c0e89d NA Primary Tumor C3N-03935.miRNA-Seq.T C3N-03935 GBM miRNA-Seq tumor CPT0285340009 200403_UNC31-K00269_0274_AHCF7GBBXY_CGGAAT_S13_L001_R1_001.unaln.bam 286598162 BAM NA c0113773-3e21-4991-82ca-7f9be7a7fbde 37b763363fc4ac2b5bf9f3023414a0e2 NA Primary Tumor +C3N-03935.miRNA-Seq.T.hg38 C3N-03935 GBM miRNA-Seq tumor CPT0285340009 d866761c-b106-45a7-a5ca-af2b3bf16c14_mirnaseq_gdc_realn.bam 329521659 BAM NA d5b0b9d3-3fc2-46c7-8d17-ed8cd9b6a9b1 c4f33e1711a5e8e744efc7c43ab19ef7 hg38 Primary Tumor C3N-03935.RNA-Seq.R1.T C3N-03935 GBM RNA-Seq tumor CPT0285340009 200204_UNC31-K00269_0263_AHG2CJBBXY_TCGTAGTG-AGACTTGG_S29_L008_R1_001.fastq.gz 3111435295 FASTQ NA 4c91740e-2276-47a4-9b32-c7720ab51594 6207b00bd1f4df987ac214c6de4366c0 NA Primary Tumor C3N-03935.RNA-Seq.R2.T C3N-03935 GBM RNA-Seq tumor CPT0285340009 200204_UNC31-K00269_0263_AHG2CJBBXY_TCGTAGTG-AGACTTGG_S29_L008_R2_001.fastq.gz 3603920661 FASTQ NA 87079c71-53a8-4bf0-925d-e914da7bfd96 e253a53c0ef2eedb1d4ffe272a685192 NA Primary Tumor C3N-03935.WGS.N C3N-03935 GBM WGS blood_normal CPT0285370002 CPT0285370002.WholeGenome.RP-2158.bam 22774513143 BAM NA d680c188-bf02-4929-8ce0-aaceb1c9d6d6 9583443718a3e2cd7c682f9827ce7e3d hg19 Blood Derived Normal +C3N-03935.WGS.N.hg38 C3N-03935 GBM WGS blood_normal CPT0285370002 6d9e79c5-a520-4b3b-bae8-a483281851f4_wgs_gdc_realn.bam 65995432537 BAM NA 8d17e3f0-ff4c-4b01-a090-2dc7d653f96e 113dde5c3d411817995ede6350b87eb3 hg38 Blood Derived Normal C3N-03935.WGS.T C3N-03935 GBM WGS tumor CPT0285340006 CPT0285340006.WholeGenome.RP-2158.bam 24454872786 BAM NA a7426cb5-a1d7-4401-a1bc-ddd7d9ec45ee faf0457669fb6285f208f1dd86aa0e8b hg19 Primary Tumor +C3N-03935.WGS.T.hg38 C3N-03935 GBM WGS tumor CPT0285340006 9e503f81-06bd-4083-8f68-04dab904125f_wgs_gdc_realn.bam 73242802527 BAM NA abd5362c-b11a-4cfb-9751-6b1041f319cb 348d55fa29df9740b756b185a7ca430e hg38 Primary Tumor C3N-03935.WXS.N C3N-03935 GBM WXS blood_normal CPT0285370002 CPT0285370002.WholeExome.RP-1303.bam 31920567263 BAM NA ecfbada8-1f23-48e7-8650-817e8b8f1b1d 1ed2f0ac6e015639be1c5007b81a0526 hg19 Blood Derived Normal C3N-03935.WXS.T C3N-03935 GBM WXS tumor CPT0285340006 CPT0285340006.WholeExome.RP-1303.bam 30700999800 BAM NA 4f9548fc-e1c4-43e6-aab1-06bf34f7339e 70f55736feafa86ff4385a86a378f58f hg19 Primary Tumor C3N-03939.MethArray.Green.T C3N-03939 GBM Methylation Array tumor CPT0285390006 204372030076_R01C01_Grn.idat 13677890 IDAT Green 59bc3dac-ed49-4e5a-8d82-0d68c8d88f4c d646c0a6ba49991d462ee8e61d40ba2e NA Primary Tumor C3N-03939.MethArray.Red.T C3N-03939 GBM Methylation Array tumor CPT0285390006 204372030076_R01C01_Red.idat 13677890 IDAT Red a9362c30-c06e-4bae-acb9-a6ee2cf24f8e 156bc292815fe7a48d4a2b53beadad1c NA Primary Tumor C3N-03939.miRNA-Seq.T C3N-03939 GBM miRNA-Seq tumor CPT0285390009 200403_UNC31-K00269_0274_AHCF7GBBXY_CTAGCT_S14_L001_R1_001.unaln.bam 245524484 BAM NA f61d0b3c-0939-49f5-9038-3a4e0363e06f bf2686dba8542b7a8ee8aed745253095 NA Primary Tumor +C3N-03939.miRNA-Seq.T.hg38 C3N-03939 GBM miRNA-Seq tumor CPT0285390009 c7dd3a3c-1814-4218-9edb-45c98aa846a8_mirnaseq_gdc_realn.bam 270906743 BAM NA 484956df-24ec-46be-96c9-79a50bc2041d 2d66bebf22009c8cd58daecaac2b86f7 hg38 Primary Tumor C3N-03939.RNA-Seq.R1.T C3N-03939 GBM RNA-Seq tumor CPT0285390009 200204_UNC31-K00269_0263_AHG2CJBBXY_CTACGACA-GAGTCCAA_S30_L008_R1_001.fastq.gz 2881386932 FASTQ NA 3f4dd232-5cba-4b97-bd63-f47967a5436a c9acc87c1e32d5a307249b6fe38e447f NA Primary Tumor C3N-03939.RNA-Seq.R2.T C3N-03939 GBM RNA-Seq tumor CPT0285390009 200204_UNC31-K00269_0263_AHG2CJBBXY_CTACGACA-GAGTCCAA_S30_L008_R2_001.fastq.gz 3302047909 FASTQ NA 452a0caf-f993-41ba-9f18-1a1180aeb710 8c18199b770ebbb65a9b55a6aace1b68 NA Primary Tumor C3N-03939.WGS.N C3N-03939 GBM WGS blood_normal CPT0285410002 CPT0285410002.WholeGenome.RP-2158.bam 27430682246 BAM NA 719de53d-9cb1-4d43-8b73-bc277df19224 7f4513d241c5df965c9be0434562c316 hg19 Blood Derived Normal +C3N-03939.WGS.N.hg38 C3N-03939 GBM WGS blood_normal CPT0285410002 6895aee0-3fa1-49d9-9d49-2e22f2f3743b_wgs_gdc_realn.bam 81852016126 BAM NA c84d71d0-5ca9-4237-bab1-93228f81c37e 7acb24f258bd2d11eddb67290f1dcfc3 hg38 Blood Derived Normal C3N-03939.WGS.T C3N-03939 GBM WGS tumor CPT0285390006 CPT0285390006.WholeGenome.RP-2158.bam 25775708475 BAM NA ba5428f4-d7c6-479a-9214-d7e1a4947ecf ea8ec285146eb2733f18adfa12fa2403 hg19 Primary Tumor +C3N-03939.WGS.T.hg38 C3N-03939 GBM WGS tumor CPT0285390006 fe1eb1b2-05b4-46f5-80e6-2f90d4dc1677_wgs_gdc_realn.bam 77742013082 BAM NA 4ffecf2d-31f6-48ff-9829-3ad720b0f748 a9c730fc1e04ea04b0dc6cf77e512aa7 hg38 Primary Tumor C3N-03939.WXS.N C3N-03939 GBM WXS blood_normal CPT0285410002 CPT0285410002.WholeExome.RP-1303.bam 25218551391 BAM NA 221aa9d7-8d0d-422b-b89e-868316bf923e a84e0b42d99823635b64d848f074cb27 hg19 Blood Derived Normal C3N-03939.WXS.T C3N-03939 GBM WXS tumor CPT0285390006 CPT0285390006.WholeExome.RP-1303.bam 16808844495 BAM NA b8dc848c-62f4-4de0-a629-1ba4efd06757 419f888cf958995fa91966ac5ce86ae1 hg19 Primary Tumor C3N-04092.MethArray.Green.T C3N-04092 GBM Methylation Array tumor CPT0285440006 204372030072_R01C01_Grn.idat 13677880 IDAT Green d9d5b8be-d2cb-4696-a372-9facb515b58f b8441ad7b43e8b636aa6c44ee71434ab NA Primary Tumor C3N-04092.MethArray.Red.T C3N-04092 GBM Methylation Array tumor CPT0285440006 204372030072_R01C01_Red.idat 13677880 IDAT Red cab1d1c1-60c4-40f0-8558-8773ca36b8f1 d77e44bcc32b7a698642b2e32a0d53a1 NA Primary Tumor C3N-04092.miRNA-Seq.T C3N-04092 GBM miRNA-Seq tumor CPT0285440009 200403_UNC31-K00269_0274_AHCF7GBBXY_CTATAC_S15_L001_R1_001.unaln.bam 247318813 BAM NA 91b1bd12-b236-4f6c-911d-7db6a9a672af 5e8d424c1233a731e08bad1e213cf549 NA Primary Tumor +C3N-04092.miRNA-Seq.T.hg38 C3N-04092 GBM miRNA-Seq tumor CPT0285440009 b8e7d110-81d4-488f-a6ac-88818105d58c_mirnaseq_gdc_realn.bam 274868455 BAM NA 5fc1f505-741a-4c21-977e-a69c068dddf4 fdee458d6d3a8b3c005b47914f926afd hg38 Primary Tumor C3N-04092.RNA-Seq.R1.T C3N-04092 GBM RNA-Seq tumor CPT0285440009 200204_UNC31-K00269_0263_AHG2CJBBXY_TAAGTGGT-CTTAAGCC_S31_L008_R1_001.fastq.gz 2896844741 FASTQ NA 34f8eb14-b9d5-4014-b2d1-ad3d3cf33a39 096b63e1e02fadb2964865f85145f210 NA Primary Tumor C3N-04092.RNA-Seq.R2.T C3N-04092 GBM RNA-Seq tumor CPT0285440009 200204_UNC31-K00269_0263_AHG2CJBBXY_TAAGTGGT-CTTAAGCC_S31_L008_R2_001.fastq.gz 3312390931 FASTQ NA 07a3bbdc-69c2-485b-98b2-82ada22cae69 381c644f9e1d582e1d7238a5cfd0065c NA Primary Tumor C3N-04092.WGS.N C3N-04092 GBM WGS blood_normal CPT0285450002 CPT0285450002.WholeGenome.RP-2158.bam 24498698839 BAM NA 566f7b48-65df-4fb3-87bc-8586884af4f1 4163c5eed29b6e10dcb8b8a00961bafd hg19 Blood Derived Normal +C3N-04092.WGS.N.hg38 C3N-04092 GBM WGS blood_normal CPT0285450002 79ce8e10-2d6f-4d92-a58c-a34c06af7677_wgs_gdc_realn.bam 74020875117 BAM NA 4c77804a-0e1e-449d-affb-55a849b06bc3 3f195251abf1d37de6e5480af6240e0f hg38 Blood Derived Normal C3N-04092.WGS.T C3N-04092 GBM WGS tumor CPT0285440006 CPT0285440006.WholeGenome.RP-2158.bam 24504031508 BAM NA 2bf06983-aea2-41c2-adf3-ff62afc65962 065d7f442c1dd8244cbc7acf702d09e3 hg19 Primary Tumor +C3N-04092.WGS.T.hg38 C3N-04092 GBM WGS tumor CPT0285440006 01e34584-fe56-487f-900d-0c82daf338a0_wgs_gdc_realn.bam 74544654961 BAM NA 2545b6fa-59be-403f-9d33-29b33c9fea27 a10fecf2efbfe70758caae437d4bc5eb hg38 Primary Tumor C3N-04092.WXS.N C3N-04092 GBM WXS blood_normal CPT0285450002 CPT0285450002.WholeExome.RP-1303.bam 27331686699 BAM NA 02dea684-c120-47a8-9e66-f3ff166d1819 b92a324f4ff18cec014d891ad48c6809 hg19 Blood Derived Normal C3N-04092.WXS.T C3N-04092 GBM WXS tumor CPT0285440006 CPT0285440006.WholeExome.RP-1303.bam 26184111709 BAM NA 50e9eb47-f03c-4992-88dd-551c23a4e436 caaa9849f32a2c5d89f45111abe64355 hg19 Primary Tumor C3N-04094.MethArray.Green.T C3N-04094 GBM Methylation Array tumor CPT0285460007 204367470131_R02C01_Grn.idat 13677880 IDAT Green 5c3e1ba0-cae1-4ae9-9273-342a86eb4c40 b0db584a4d71d5e8d153a9e2c96bf161 NA Primary Tumor C3N-04094.MethArray.Red.T C3N-04094 GBM Methylation Array tumor CPT0285460007 204367470131_R02C01_Red.idat 13677880 IDAT Red 87a4544c-b6d3-4560-aaf8-81719f14b3eb 5c9d3a1f850764061ce770c389085aef NA Primary Tumor C3N-04094.miRNA-Seq.T C3N-04094 GBM miRNA-Seq tumor CPT0285460010 200403_UNC31-K00269_0274_AHCF7GBBXY_CTCAGA_S16_L001_R1_001.unaln.bam 149874462 BAM NA a8e314a0-82cb-467d-8341-0d0069bb2b0e 67045085535b61b9aea205dd5f731436 NA Primary Tumor +C3N-04094.miRNA-Seq.T.hg38 C3N-04094 GBM miRNA-Seq tumor CPT0285460010 16e7f672-0451-45e7-b0a8-a5a62491ea99_mirnaseq_gdc_realn.bam 165882365 BAM NA ab2a0a68-a90a-454d-86ad-b9bc2aaf99dc dcd88526e635e2263dd3d42d34e6dbed hg38 Primary Tumor C3N-04094.RNA-Seq.R1.T C3N-04094 GBM RNA-Seq tumor CPT0285460010 200218_UNC31-K00269_0266_AHGKHKBBXY_CGGACAAC-TCCGGATT_S60_L006_R1_001.fastq.gz 5489923938 FASTQ NA fa31d2b3-82b2-4734-8c22-ac89b732e8a2 cdfe6c623bfababea2e868a4ae59f0d7 NA Primary Tumor C3N-04094.RNA-Seq.R2.T C3N-04094 GBM RNA-Seq tumor CPT0285460010 200218_UNC31-K00269_0266_AHGKHKBBXY_CGGACAAC-TCCGGATT_S60_L006_R2_001.fastq.gz 6031283932 FASTQ NA 254472af-7bd3-4dfb-9014-c2dc90560859 de8e1f778e080b5809fefcbc804cdcc0 NA Primary Tumor C3N-04094.WGS.N C3N-04094 GBM WGS blood_normal CPT0285490002 CPT0285490002.WholeGenome.RP-2158.bam 32209259574 BAM NA 96edcb35-53eb-4666-b388-713a74542f88 3dda872bd2942f35fabb36e1c84148b7 hg19 Blood Derived Normal +C3N-04094.WGS.N.hg38 C3N-04094 GBM WGS blood_normal CPT0285490002 1890659f-5698-4b8f-a0bf-1da6b3791731_wgs_gdc_realn.bam 94794094970 BAM NA 9f93ec20-1c38-41a0-8f96-28457caad083 4509d1b328ecd668f7f22457f604e4f9 hg38 Blood Derived Normal C3N-04094.WGS.T C3N-04094 GBM WGS tumor CPT0285460007 CPT0285460007.WholeGenome.RP-2158.bam 22517447803 BAM NA 8574b1b2-a42e-4fae-9300-61ae76f62d00 0b15efca7c6bac108588e65712c37f99 hg19 Primary Tumor +C3N-04094.WGS.T.hg38 C3N-04094 GBM WGS tumor CPT0285460007 917e08bc-e1f6-4a6f-a593-4b99445df33e_wgs_gdc_realn.bam 66930723100 BAM NA 57d06724-da21-4c7d-8738-ffd08f512893 20634cd7bc8f42385b6e93a2727366f4 hg38 Primary Tumor C3N-04094.WXS.N C3N-04094 GBM WXS blood_normal CPT0285490002 CPT0285490002.WholeExome.RP-1303.bam 21093147419 BAM NA 4e99f6a2-d917-4406-9326-2a9fc2b509ab 1dca8575fdbd1a9d3e3ea7d8e3f64174 hg19 Blood Derived Normal C3N-04094.WXS.T C3N-04094 GBM WXS tumor CPT0285460007 CPT0285460007.WholeExome.RP-1303.bam 22403351746 BAM NA 1fe503ff-2f3a-45eb-b1ce-2d64bfdd3ba0 4e5f0cb2d43597dcb6c35a1ae88be98c hg19 Primary Tumor C3N-04097.MethArray.Green.T C3N-04097 GBM Methylation Array tumor CPT0285500006 204372030164_R02C01_Grn.idat 13677880 IDAT Green e7c32d3b-ffc3-47e3-917c-9042af3b56b5 8f1af1c1922c0076ce08a8e768826879 NA Primary Tumor C3N-04097.MethArray.Red.T C3N-04097 GBM Methylation Array tumor CPT0285500006 204372030164_R02C01_Red.idat 13677880 IDAT Red 343a7d43-de13-4bb2-9b70-c6fba43a1c06 a6f9d2a70038e18c02d622f0d11b3feb NA Primary Tumor C3N-04097.miRNA-Seq.T C3N-04097 GBM miRNA-Seq tumor CPT0285500009 200403_UNC31-K00269_0274_AHCF7GBBXY_GACGAC_S17_L001_R1_001.unaln.bam 259764215 BAM NA a9428f90-fc78-4575-b8cb-96de3e36296f bbcf7fc25087244596d20e732ad5f913 NA Primary Tumor +C3N-04097.miRNA-Seq.T.hg38 C3N-04097 GBM miRNA-Seq tumor CPT0285500009 7370bed1-5db7-4796-9763-d586cd61377e_mirnaseq_gdc_realn.bam 291557531 BAM NA 7055fdfe-5233-425f-9ed6-24158dcc0afd d931adbc27b0322a0f5d6d12d7e9d19a hg38 Primary Tumor C3N-04097.RNA-Seq.R1.T C3N-04097 GBM RNA-Seq tumor CPT0285500009 200129_UNC31-K00269_0261_AHG2CLBBXY_ATATGGAT-CTGTATTA_S1_L004_R1_001.fastq.gz 3206768037 FASTQ NA 9e14644a-eeec-4d36-a439-d7defafab519 0984770fa06a36ea6ea3e9a65080a01a NA Primary Tumor C3N-04097.RNA-Seq.R2.T C3N-04097 GBM RNA-Seq tumor CPT0285500009 200129_UNC31-K00269_0261_AHG2CLBBXY_ATATGGAT-CTGTATTA_S1_L004_R2_001.fastq.gz 3546803900 FASTQ NA f1b1a394-d643-496b-b856-60147ea00c1a 82bb59dd2209eb45feae2645291434b5 NA Primary Tumor C3N-04097.WGS.N C3N-04097 GBM WGS blood_normal CPT0285530002 CPT0285530002.WholeGenome.RP-2158.bam 29954202898 BAM NA fc560399-532f-4dd8-b751-b8918dce92a0 677983628c2001d417bd3e165463bfbe hg19 Blood Derived Normal +C3N-04097.WGS.N.hg38 C3N-04097 GBM WGS blood_normal CPT0285530002 926063e7-fbde-4313-8074-4ca104eef182_wgs_gdc_realn.bam 89113536785 BAM NA 4784a3d9-c761-4a61-9dac-3d84eb853c59 5b048f201405f108765411ce5db2bbc2 hg38 Blood Derived Normal C3N-04097.WGS.T C3N-04097 GBM WGS tumor CPT0285500006 CPT0285500006.WholeGenome.RP-2158.bam 28363607419 BAM NA f9c5426f-dacd-426f-9a0f-897ccad93344 e2ab05ff6917d412f766e6f5e948d6fa hg19 Primary Tumor +C3N-04097.WGS.T.hg38 C3N-04097 GBM WGS tumor CPT0285500006 dc8d772e-ffad-4cc1-9a32-80000b767f7b_wgs_gdc_realn.bam 86071581874 BAM NA b206bbed-72f4-4453-b41b-7af6e8c5555a bc5b0d002a8b17af36ebf8ea7ce57d00 hg38 Primary Tumor C3N-04097.WXS.N C3N-04097 GBM WXS blood_normal CPT0285530002 CPT0285530002.WholeExome.RP-1303.bam 33139294412 BAM NA e0264820-b1e9-4169-9ce4-4ec86ef3df3f 32d33936877cfb574b9ea9d381014780 hg19 Blood Derived Normal C3N-04097.WXS.T C3N-04097 GBM WXS tumor CPT0285500006 CPT0285500006.WholeExome.RP-1303.bam 16249740413 BAM NA af47378d-93eb-4d71-9fd9-19a5fbda4cda c6da59d57b0c62201bd616321dc26014 hg19 Primary Tumor C3N-04098.MethArray.Green.T C3N-04098 GBM Methylation Array tumor CPT0285540007 204372030085_R03C01_Grn.idat 13677880 IDAT Green 47ea6a5c-160f-48ee-9d61-4561b529abcd 89bfa7133997b45f8ecdd77dbedec7d7 NA Primary Tumor C3N-04098.MethArray.Red.T C3N-04098 GBM Methylation Array tumor CPT0285540007 204372030085_R03C01_Red.idat 13677880 IDAT Red 3c91d6ac-4127-44bc-9f33-d58a07e3887d 4b613e2bf977fc871d488f79c5c40871 NA Primary Tumor C3N-04098.miRNA-Seq.T C3N-04098 GBM miRNA-Seq tumor CPT0285540010 200403_UNC31-K00269_0274_AHCF7GBBXY_TAATCG_S18_L001_R1_001.unaln.bam 257392272 BAM NA a42fe332-87d4-4a16-a2ad-de9c84e8cee1 bad4e0983479bac0f19571e392f20a6f NA Primary Tumor +C3N-04098.miRNA-Seq.T.hg38 C3N-04098 GBM miRNA-Seq tumor CPT0285540010 f8ef438d-5435-410c-981e-3c637c1a913b_mirnaseq_gdc_realn.bam 288457553 BAM NA 76804205-4e1a-44fc-b05b-c7db2d525060 405f3bc4f2797c9dfc1eabef7cee027e hg38 Primary Tumor C3N-04098.RNA-Seq.R1.T C3N-04098 GBM RNA-Seq tumor CPT0285540010 200129_UNC31-K00269_0261_AHG2CLBBXY_GCGCAAGC-TCACGCCG_S2_L004_R1_001.fastq.gz 2769564498 FASTQ NA e4772d8e-0ded-4236-8602-1b1dfe51e8df a2c47ebaa52301b2b649605b70283058 NA Primary Tumor C3N-04098.RNA-Seq.R2.T C3N-04098 GBM RNA-Seq tumor CPT0285540010 200129_UNC31-K00269_0261_AHG2CLBBXY_GCGCAAGC-TCACGCCG_S2_L004_R2_001.fastq.gz 3112888700 FASTQ NA 129e4b38-443f-4cf9-8e20-f98ccef517c8 ca8808351719f9cebd4bfb9948814dfc NA Primary Tumor C3N-04098.WGS.N C3N-04098 GBM WGS blood_normal CPT0285570002 CPT0285570002.WholeGenome.RP-2158.bam 27310844142 BAM NA 7750f7a5-f900-492e-bfe8-8eb204bb32c3 b38d23906173f49262d77fe7ea08d538 hg19 Blood Derived Normal +C3N-04098.WGS.N.hg38 C3N-04098 GBM WGS blood_normal CPT0285570002 6416d98a-0117-48ec-a6ea-0875e22f55aa_wgs_gdc_realn.bam 81502245485 BAM NA 4cf31016-4283-4728-a22e-b353f72b2ae7 a969ee7707fea38c2e8d3421a0ee312c hg38 Blood Derived Normal C3N-04098.WGS.T C3N-04098 GBM WGS tumor CPT0285540007 CPT0285540007.WholeGenome.RP-2158.bam 24939569712 BAM NA d866896c-45d0-4928-8193-ad1e2aca0b4a 7ba1ba31d7a085a5d73b71b63ca6518b hg19 Primary Tumor +C3N-04098.WGS.T.hg38 C3N-04098 GBM WGS tumor CPT0285540007 884a7198-709f-4946-9e7a-dea9055906df_wgs_gdc_realn.bam 75917029860 BAM NA 687ccc83-df37-4a60-acb8-5a6a684de758 6086a07bb809d62ce9a6b614d2b517ef hg38 Primary Tumor C3N-04098.WXS.N C3N-04098 GBM WXS blood_normal CPT0285570002 CPT0285570002.WholeExome.RP-1303.bam 20394067243 BAM NA c242871c-7c14-4485-9ebc-e61f77f019bf 4eb014fce5a992c3998d7f7e2be578c0 hg19 Blood Derived Normal C3N-04098.WXS.T C3N-04098 GBM WXS tumor CPT0285540007 CPT0285540007.WholeExome.RP-1303.bam 22554228508 BAM NA dafa82a6-dba7-449d-93a1-19b928e9e5ff 654482e78db397fc32ed34deedce4a2e hg19 Primary Tumor C3N-04100.MethArray.Green.T C3N-04100 GBM Methylation Array tumor CPT0285590006 204372030087_R02C01_Grn.idat 13677880 IDAT Green 2ba9e0e4-75bb-4337-9f00-84bca1ebafa2 da4054674d9d392292e720368f77d39d NA Primary Tumor C3N-04100.MethArray.Red.T C3N-04100 GBM Methylation Array tumor CPT0285590006 204372030087_R02C01_Red.idat 13677880 IDAT Red 0081743c-0dc3-40b7-9c2d-3ed5bb447a98 315bad76f550028acbbdcb2d68143c4d NA Primary Tumor C3N-04100.miRNA-Seq.T C3N-04100 GBM miRNA-Seq tumor CPT0285590013 200513_UNC31-K00269_0278_BHH7Y7BBXY_TCCCGA_S46_L008_R1_001.unaln.bam 177661367 BAM NA 601c2e37-5f34-490e-9d23-b35b0666b729 5efaffbc62c746d941ef22dbbb28571e NA Primary Tumor +C3N-04100.miRNA-Seq.T.hg38 C3N-04100 GBM miRNA-Seq tumor CPT0285590013 9cbac332-c8ef-4f04-af5b-d1ef073c17e4_mirnaseq_gdc_realn.bam 196890022 BAM NA 4332b035-f3ff-425c-97d5-04c51097867c 23384249754801601ea4a09c62c6f440 hg38 Primary Tumor C3N-04100.RNA-Seq.R1.T C3N-04100 GBM RNA-Seq tumor CPT0285590013 200218_UNC31-K00269_0266_AHGKHKBBXY_CGGAACTG-CACTACGA_S55_L005_R1_001.fastq.gz 3439688996 FASTQ NA d5d4dee6-5523-43c9-902b-c019c3a29533 00c4fd479a32cf9cb27e1dd76c87e47c NA Primary Tumor C3N-04100.RNA-Seq.R2.T C3N-04100 GBM RNA-Seq tumor CPT0285590013 200218_UNC31-K00269_0266_AHGKHKBBXY_CGGAACTG-CACTACGA_S55_L005_R2_001.fastq.gz 3823577433 FASTQ NA 92f769cc-3b94-4805-bef6-3de96959e898 bb91595c586526f3a8a51ddb8f2c94e8 NA Primary Tumor C3N-04100.WGS.N C3N-04100 GBM WGS blood_normal CPT0285610002 CPT0285610002.WholeGenome.RP-2158.bam 21930007345 BAM NA 7f74ed3f-e21c-4b44-84ad-49124953f987 3c9ea2075bac8d7319958b79fa0d44a5 hg19 Blood Derived Normal +C3N-04100.WGS.N.hg38 C3N-04100 GBM WGS blood_normal CPT0285610002 e3fe94f7-af5a-4001-a67e-3a0a35c6cd4a_wgs_gdc_realn.bam 66740897940 BAM NA 4d339a11-7fe1-4768-9bce-01c4d959a1b5 3047418fcddb4de262e2224aad8db920 hg38 Blood Derived Normal C3N-04100.WGS.T C3N-04100 GBM WGS tumor CPT0285590006 CPT0285590006.WholeGenome.RP-2158.bam 26982190290 BAM NA 51d10bc6-e276-4f15-8be4-8f45643913a0 5cb342ee12bdf68d10b8816071c2c7b6 hg19 Primary Tumor +C3N-04100.WGS.T.hg38 C3N-04100 GBM WGS tumor CPT0285590006 60fd69ce-3aa4-48fc-8ee0-095e68c64b9e_wgs_gdc_realn.bam 78877872512 BAM NA 6655aea0-8f5c-4a62-813f-4afe372c81a3 c7f5f21aad21a761ecf4466ad90e3154 hg38 Primary Tumor C3N-04100.WXS.N C3N-04100 GBM WXS blood_normal CPT0285610002 CPT0285610002.WholeExome.RP-1303.bam 28613971741 BAM NA 738934dd-363d-4ce8-a743-616e0e07bfc7 46bad9dd8550c2a18a344b9341aa293a hg19 Blood Derived Normal C3N-04100.WXS.T C3N-04100 GBM WXS tumor CPT0285590006 CPT0285590006.WholeExome.RP-1303.bam 20792557880 BAM NA 0d3f613d-522c-463c-a8bd-b4616bb6745a 94e8b5cc8cbdf56ba3ac13c68b25ca2f hg19 Primary Tumor C3N-04113.MethArray.Green.T C3N-04113 GBM Methylation Array tumor CPT0285620006 204367490093_R03C01_Grn.idat 13677900 IDAT Green 67d72c45-fa2d-4cad-8582-0f19edbe887f d1e011e14c85077bdb8822de07f06e55 NA Primary Tumor C3N-04113.MethArray.Red.T C3N-04113 GBM Methylation Array tumor CPT0285620006 204367490093_R03C01_Red.idat 13677900 IDAT Red fa6fcda1-b93e-4900-92fb-885e8ade614b 26e8d89e983ad6a3cb27385e0d70def6 NA Primary Tumor C3N-04113.miRNA-Seq.T C3N-04113 GBM miRNA-Seq tumor CPT0285620009 200403_UNC31-K00269_0274_AHCF7GBBXY_TACAGC_S19_L001_R1_001.unaln.bam 270137881 BAM NA a7fa3f22-13ef-477e-9c36-96b8bb785f93 6baf863fd9d32accf03d39deafaa653b NA Primary Tumor +C3N-04113.miRNA-Seq.T.hg38 C3N-04113 GBM miRNA-Seq tumor CPT0285620009 cea639d4-1aa7-4d7c-b599-0fea38b57497_mirnaseq_gdc_realn.bam 297734367 BAM NA 0e0a8eff-4408-44a7-a764-fad48d8c32f8 df910efdda6fb5bbc29664dbeaa8ed7d hg38 Primary Tumor C3N-04113.RNA-Seq.R1.T C3N-04113 GBM RNA-Seq tumor CPT0285620009 200129_UNC31-K00269_0261_AHG2CLBBXY_AAGATACT-ACTTACAT_S3_L004_R1_001.fastq.gz 3523637381 FASTQ NA 9f0d3283-518d-4cbe-ac56-7f4cff984a77 2f081d269ba4839f78a1af74095b73b1 NA Primary Tumor C3N-04113.RNA-Seq.R2.T C3N-04113 GBM RNA-Seq tumor CPT0285620009 200129_UNC31-K00269_0261_AHG2CLBBXY_AAGATACT-ACTTACAT_S3_L004_R2_001.fastq.gz 3851534424 FASTQ NA 1ce40d45-b6a8-43a9-8aa1-82b4ed1f4a95 99f25205d09e2947c289dc0c34d3a98a NA Primary Tumor C3N-04113.WGS.N C3N-04113 GBM WGS blood_normal CPT0285650002 CPT0285650002.WholeGenome.RP-2158.bam 29591689611 BAM NA 88491985-2778-4634-b8ed-32a17626ad72 c9b4212007523ca3edf8027e82338068 hg19 Blood Derived Normal +C3N-04113.WGS.N.hg38 C3N-04113 GBM WGS blood_normal CPT0285650002 48f76814-e8a6-4689-ae08-37a3da4fbccf_wgs_gdc_realn.bam 91183903789 BAM NA 8a56868d-6456-4125-bd94-c89e0afdaeff fb7343f4e4926483b47990f66b663bd0 hg38 Blood Derived Normal C3N-04113.WGS.T C3N-04113 GBM WGS tumor CPT0285620006 CPT0285620006.WholeGenome.RP-2158.bam 27745088896 BAM NA 80115334-9ece-488f-b05f-03c26f207441 a09f615b04e741e7315b3f5d8bcfd439 hg19 Primary Tumor +C3N-04113.WGS.T.hg38 C3N-04113 GBM WGS tumor CPT0285620006 5ad1a3d2-831b-405d-b7d9-7e1728337e25_wgs_gdc_realn.bam 81872292228 BAM NA b4fdd133-7457-4a99-9621-b06aad5f7def 54953303ba85b449d8be407f0aaf75a4 hg38 Primary Tumor +C3N-04113.WXS.N C3N-04113 GBM WXS blood_normal CPT0285650002 CPT0285650002.WholeExome.RP-1303.bam 29786208134 BAM NA f0c8c00e-1b52-496e-9eaf-09da2938df9b 2d27afb21276d6f25ebad2c1b91406eb hg19 Blood Derived Normal +C3N-04113.WXS.T C3N-04113 GBM WXS tumor CPT0285620006 CPT0285620006.WholeExome.RP-1303.bam 17556011264 BAM NA aed4bf91-e6eb-4727-8859-db34bdd810c5 6f21b8dbd5cb303f23a93b1fdad29e9d hg19 Primary Tumor C3N-04119.MethArray.Green.A C3N-04119 PDA Methylation Array tissue_normal CPT0237920007 203273630048_R07C01_Grn.idat 13676231 IDAT Green 92c2f356-545e-4080-8b2a-df898113c2ee ab88e89c17d3c712f4f54cd23639f02d NA Solid Tissue Normal C3N-04119.MethArray.Green.T C3N-04119 PDA Methylation Array tumor CPT0237910007 203561620008_R01C01_Grn.idat 13676236 IDAT Green efc75b36-c1da-4fa7-948f-a798a4838b5a 1ad15d30a97dd35e2791a5eb80f8e5d7 NA Primary Tumor C3N-04119.MethArray.Red.A C3N-04119 PDA Methylation Array tissue_normal CPT0237920007 203273630048_R07C01_Red.idat 13676231 IDAT Red 03788187-1968-4a9d-8159-8cb73bbaaddd b00f902b97796d104ffa1093ef3253be NA Solid Tissue Normal @@ -31227,10 +31789,13 @@ C3N-04162.WXS.T.hg38 C3N-04162 LSCC WXS tumor CPT0222730006 fb4d7e5b-3eb4-4172-9 C3N-04167.MethArray.Green.T C3N-04167 LSCC Methylation Array tumor CPT0249050006 204367490029_R06C01_Grn.idat 13677885 IDAT Green e21de324-7efc-4cea-a339-1728e075b4d7 cb21366e44dcaa584fbfb884cbebf1de NA Primary Tumor C3N-04167.MethArray.Red.T C3N-04167 LSCC Methylation Array tumor CPT0249050006 204367490029_R06C01_Red.idat 13677885 IDAT Red 4f2951e2-0f1a-483f-8c7a-913ee489ad59 98c3f65db7414c7f7dcc6289b1595da6 NA Primary Tumor C3N-04167.miRNA-Seq.T C3N-04167 LSCC miRNA-Seq tumor CPT0249050009 200224_UNC31-K00269_0267_AHC722BBXY_GGCTAC_S11_L006_R1_001.unaln.bam 238350119 BAM NA d05a452a-7015-46a6-a29a-3bda5e4f8a46 b18fd522683602cec0ff65f5e71353f2 NA Primary Tumor +C3N-04167.miRNA-Seq.T.hg38 C3N-04167 LSCC miRNA-Seq tumor CPT0249050009 f12c1f2e-078a-43d4-b1b6-798d34beb3d5_mirnaseq_gdc_realn.bam 260298458 BAM NA f4cd913a-0692-406f-8c71-7705e4065cc0 e77511bba62d83f5c334d7f851d678fc hg38 Primary Tumor C3N-04167.RNA-Seq.R1.T C3N-04167 LSCC RNA-Seq tumor CPT0249050009 200428_UNC32-K00270_0243_AHG3Y3BBXY_GATCTATC-ATGAGGCT_S27_L007_R1_001.fastq.gz 3708412646 FASTQ NA 8fa96e75-2009-4b73-a20a-689d08d646dd e36c118d4314e5f896600fbdcff434aa NA Primary Tumor C3N-04167.RNA-Seq.R2.T C3N-04167 LSCC RNA-Seq tumor CPT0249050009 200428_UNC32-K00270_0243_AHG3Y3BBXY_GATCTATC-ATGAGGCT_S27_L007_R2_001.fastq.gz 3918445251 FASTQ NA b52c5dd8-978c-4368-9368-102a5cac3a4a faaf72850759eebe788f28d0467a7f7d NA Primary Tumor C3N-04167.WGS.N C3N-04167 LSCC WGS blood_normal CPT0249170002 CPT0249170002.WholeGenome.RP-2158.bam 24039273983 BAM NA e70f6494-f6c6-4a38-92ca-be988a887e1d 086eb339ffbe20bae163b653bf7343fe hg19 Blood Derived Normal +C3N-04167.WGS.N.hg38 C3N-04167 LSCC WGS blood_normal CPT0249170002 0675bc40-c123-4b18-a757-d78c4b35e44d_wgs_gdc_realn.bam 70803984910 BAM NA 2771a10d-8489-46ac-8cc4-3b167f93421f c1d739e0c13289d798cbdf914c5f388c hg38 Blood Derived Normal C3N-04167.WGS.T C3N-04167 LSCC WGS tumor CPT0249050006 CPT0249050006.WholeGenome.RP-2158.bam 26382517132 BAM NA 8e427eb2-b52e-4407-b5a1-5ab59953505d 032b6b8753fe22d298e5a97d0c506548 hg19 Primary Tumor +C3N-04167.WGS.T.hg38 C3N-04167 LSCC WGS tumor CPT0249050006 08585106-99a3-44b3-8df8-1d8ca02e0287_wgs_gdc_realn.bam 77140691801 BAM NA 137fb776-d437-4540-b758-a4da5a85994f 8571d0d562b32983f5b70efc4d0d0024 hg38 Primary Tumor C3N-04167.WXS.N C3N-04167 LSCC WXS blood_normal CPT0249170002 CPT0249170002.WholeExome.RP-1303.bam 25357095563 BAM NA f68a9ec4-a53f-4c9d-87fc-5993e0776709 1379f72ffc7c62a3ba6b07fad4fc6efb hg19 Blood Derived Normal C3N-04167.WXS.T C3N-04167 LSCC WXS tumor CPT0249050006 CPT0249050006.WholeExome.RP-1303.bam 22845782341 BAM NA 65e83103-eead-4b2e-8511-fc92419a484e 2715b9a8b14891dc9b2a2904b4ed63dc hg19 Primary Tumor C3N-04168.MethArray.Green.A C3N-04168 LUAD Methylation Array tissue_normal CPT0255870006 203561620132_R02C01_Grn.idat 13676211 IDAT Green 94e58112-8502-4f56-ba46-dbb431aecf3f 8ba451f13a1da2bdd6a1997140adeb37 NA Solid Tissue Normal @@ -31266,15 +31831,20 @@ C3N-04169.MethArray.Green.T C3N-04169 LSCC Methylation Array tumor CPT0247290006 C3N-04169.MethArray.Red.A C3N-04169 LSCC Methylation Array tissue_normal CPT0247300006 204372030011_R07C01_Red.idat 13677890 IDAT Red 962edc15-dbfc-4667-bcfa-e5532c97c561 2d913e0cfa5528fcc01b6d63b13c02a8 NA Solid Tissue Normal C3N-04169.MethArray.Red.T C3N-04169 LSCC Methylation Array tumor CPT0247290006 204372030072_R06C01_Red.idat 13677880 IDAT Red 95ca4fab-9bf8-427a-8030-7f807701bd26 54b8a838a7d8129290e5d91e1d0f1559 NA Primary Tumor C3N-04169.miRNA-Seq.A C3N-04169 LSCC miRNA-Seq tissue_normal CPT0247300009 200325_UNC31-K00269_0272_AHHC2NBBXY_CACTCA_S8_L001_R1_001.unaln.bam 285562461 BAM NA 43b74453-a2da-49c8-a27d-e49397ddb657 70ba91723dcdb15ab64f975aff5a24b1 NA Solid Tissue Normal +C3N-04169.miRNA-Seq.A.hg38 C3N-04169 LSCC miRNA-Seq tissue_normal CPT0247300009 e90391c1-7cf0-4a2b-a09f-06f057ee520e_mirnaseq_gdc_realn.bam 316359797 BAM NA 248b19a7-04e8-4c40-ae09-52dc35d082b6 7a1deb74b731fcf11728d84ee7c1bd47 hg38 Solid Tissue Normal C3N-04169.miRNA-Seq.T C3N-04169 LSCC miRNA-Seq tumor CPT0247290009 200224_UNC31-K00269_0267_AHC722BBXY_GCCAAT_S6_L008_R1_001.unaln.bam 269880160 BAM NA 62b32a9f-b600-4aee-a5c5-36f9e3ae9505 3835ce426a47f250fe83ea79023ec7f4 NA Primary Tumor +C3N-04169.miRNA-Seq.T.hg38 C3N-04169 LSCC miRNA-Seq tumor CPT0247290009 f4fd6ccc-2285-40e9-b747-89fb171fd276_mirnaseq_gdc_realn.bam 304470695 BAM NA 03c02385-3090-405c-a365-71122d03a7f0 bc6c738c29d339d476d078169dbb56a5 hg38 Primary Tumor C3N-04169.RNA-Seq.R1.A C3N-04169 LSCC RNA-Seq tissue_normal CPT0247300009 200428_UNC31-K00269_0275_AHGCJVBBXY_GTGAATAT-TCTCATTC_S16_L004_R1_001.fastq.gz 4472375634 FASTQ NA f863296d-78d7-438d-8bb2-300c515dda44 271cf5fe0aab959a36831d604620ba3c NA Solid Tissue Normal C3N-04169.RNA-Seq.R1.T C3N-04169 LSCC RNA-Seq tumor CPT0247290009 200505_UNC32-K00270_0245_AHH5FVBBXY_GCTTGTCA-GAACATAC_S6_L002_R1_001.fastq.gz 3690580584 FASTQ NA 97479f3b-6532-460a-a0ab-10b872618b99 56f7a0572544ba1d5ebeb5a3485df335 NA Primary Tumor C3N-04169.RNA-Seq.R2.A C3N-04169 LSCC RNA-Seq tissue_normal CPT0247300009 200428_UNC31-K00269_0275_AHGCJVBBXY_GTGAATAT-TCTCATTC_S16_L004_R2_001.fastq.gz 4663229052 FASTQ NA b12930f4-cac7-4a0d-a0b8-5e76154adf3f 7bbe8b68b272eac50aca5caa701d9055 NA Solid Tissue Normal C3N-04169.RNA-Seq.R2.T C3N-04169 LSCC RNA-Seq tumor CPT0247290009 200505_UNC32-K00270_0245_AHH5FVBBXY_GCTTGTCA-GAACATAC_S6_L002_R2_001.fastq.gz 3928710079 FASTQ NA 0dd2c9f0-e996-43d9-bf63-520d9935099d 36cbaf7a3223820833f4e166f3c04c6f NA Primary Tumor C3N-04169.WGS.N C3N-04169 LSCC WGS blood_normal CPT0247330002 CPT0247330002.WholeGenome.RP-2158.bam 24715128796 BAM NA 7667bb36-7936-45d5-a1c7-7e8ec9e84a15 ad2e7db42e775726e0d41a322e9e2c88 hg19 Blood Derived Normal +C3N-04169.WGS.N.hg38 C3N-04169 LSCC WGS blood_normal CPT0247330002 54e2e9f0-9524-4e55-9d51-57a4fb7cce60_wgs_gdc_realn.bam 73463581136 BAM NA d3718f3b-2fda-4bdc-a5ad-37575d052825 44aa69a30fe82723b48e2778fb8312ba hg38 Blood Derived Normal C3N-04169.WGS.T C3N-04169 LSCC WGS tumor CPT0247290006 CPT0247290006.WholeGenome.RP-2158.bam 22090184946 BAM NA 2eaa7890-61af-4285-9981-816aa9a78e64 264043421f9de8bbea648404bcb7fdbe hg19 Primary Tumor +C3N-04169.WGS.T.hg38 C3N-04169 LSCC WGS tumor CPT0247290006 a23139fb-5134-4078-b6dc-1bda1c7f8bd9_wgs_gdc_realn.bam 63075312406 BAM NA 0804e70b-bb9b-43d8-ab44-1205ebbde973 901ad506e63961e00620627573beec0a hg38 Primary Tumor C3N-04169.WXS.A C3N-04169 LSCC WXS tissue_normal CPT0247300006 CPT0247300006.WholeExome.RP-1303.bam 26976082013 BAM NA e99c9ddf-805a-4b50-b9dc-6819e8e9a8fd 64fb3fc2a3cf8c3263a7d758df167fd9 hg19 Solid Tissue Normal C3N-04169.WXS.N C3N-04169 LSCC WXS blood_normal CPT0247330002 CPT0247330002.WholeExome.RP-1303.bam 21686577140 BAM NA 4f88eda3-9908-46c7-a77b-5472710d9c17 d905d4a4f17fa91ef0aac8194c33bf29 hg19 Blood Derived Normal +C3N-04169.WXS.T C3N-04169 LSCC WXS tumor CPT0247290006 CPT0247290006.WholeExome.RP-1303.bam 36600511424 BAM NA 2a3be69f-f8bf-46aa-86b0-f786b68d48c7 509fa7959b2a728c95519474535a6c92 hg19 Primary Tumor C3N-04173.MethArray.Green.A C3N-04173 LUAD Methylation Array tissue_normal CPT0246090006 203561620132_R04C01_Grn.idat 13676211 IDAT Green 92630ab6-eb8f-40bf-b81c-cff5aafd92f4 974a082653501d57a31fa5140c75d82c NA Solid Tissue Normal C3N-04173.MethArray.Green.T C3N-04173 LUAD Methylation Array tumor CPT0246080006 203561620053_R04C01_Grn.idat 13676211 IDAT Green 030aace5-4fac-48ea-9279-6e0d08e8ac19 9c00b6d1f43b4607fc2e0ea1e0358339 NA Primary Tumor C3N-04173.MethArray.Red.A C3N-04173 LUAD Methylation Array tissue_normal CPT0246090006 203561620132_R04C01_Red.idat 13676211 IDAT Red 499cc254-3b17-45db-80d9-f7b35ed420ab d24a63606a41a198bb42060a52b963b5 NA Solid Tissue Normal @@ -31557,10 +32127,13 @@ C3N-04284.WXS.T.high_cov C3N-04284 PDA WXS tumor CPT0247090006 CPT0247090006.Who C3N-04312.MethArray.Green.T C3N-04312 GBM Methylation Array tumor CPT0285670006 204372030011_R01C01_Grn.idat 13677890 IDAT Green 66bf3820-3c75-417b-863f-86e0b1e44443 3f5ce1fad8fd5c4893cd42647606cca8 NA Primary Tumor C3N-04312.MethArray.Red.T C3N-04312 GBM Methylation Array tumor CPT0285670006 204372030011_R01C01_Red.idat 13677890 IDAT Red 0d747cb9-cda6-4975-af25-5e0b39b351c7 67254b80bea4828ea03573eab55d48e8 NA Primary Tumor C3N-04312.miRNA-Seq.T C3N-04312 GBM miRNA-Seq tumor CPT0285670009 200403_UNC31-K00269_0274_AHCF7GBBXY_AGTCAA_S37_L002_R1_001.unaln.bam 273660927 BAM NA e7f6effd-e817-4e2b-8c06-576689dab185 3db8326fa4fc6c21832b4c4dc62c531d NA Primary Tumor +C3N-04312.miRNA-Seq.T.hg38 C3N-04312 GBM miRNA-Seq tumor CPT0285670009 51030b5e-f536-41d9-acf7-8908bfc76d55_mirnaseq_gdc_realn.bam 307510606 BAM NA 5421b9bc-b81d-4d9d-97f9-c80fc5dd5b3f d6b98cce43056b89d0ccd3f7abe72722 hg38 Primary Tumor C3N-04312.RNA-Seq.R1.T C3N-04312 GBM RNA-Seq tumor CPT0285670009 200204_UNC31-K00269_0263_AHG2CJBBXY_CCAAGTCT-AAGGATGA_S5_L002_R1_001.fastq.gz 4121966646 FASTQ NA b9ffa766-00b4-43fc-9cdd-d894a2cdce9c 58c978bf02f4306e6d0708151bb8e7ea NA Primary Tumor C3N-04312.RNA-Seq.R2.T C3N-04312 GBM RNA-Seq tumor CPT0285670009 200204_UNC31-K00269_0263_AHG2CJBBXY_CCAAGTCT-AAGGATGA_S5_L002_R2_001.fastq.gz 4900993669 FASTQ NA 7db80f50-b30d-44fc-9bc6-e03eb048a892 d6edbf143dafb72e6519f0966e519dce NA Primary Tumor C3N-04312.WGS.N C3N-04312 GBM WGS blood_normal CPT0280980002 CPT0280980002.WholeGenome.RP-2158.bam 23874939224 BAM NA 9a3c3468-1221-4b91-bc33-9b090e555ab5 97a8ffb0f4066f0a6e88edb4b40cdbe6 hg19 Blood Derived Normal +C3N-04312.WGS.N.hg38 C3N-04312 GBM WGS blood_normal CPT0280980002 37205469-4d6f-486b-905f-c54392d21b4f_wgs_gdc_realn.bam 71335743020 BAM NA 014f16a2-6c7b-4b66-b1a8-2e5579964f02 c062b3939d85c8d8449078c2a5bbe569 hg38 Blood Derived Normal C3N-04312.WGS.T C3N-04312 GBM WGS tumor CPT0285670006 CPT0285670006.WholeGenome.RP-2158.bam 26413654675 BAM NA 74fffef0-59b5-41fd-8d10-2d385a875c65 93de20b937fb1e1a47c73b2b0af4e071 hg19 Primary Tumor +C3N-04312.WGS.T.hg38 C3N-04312 GBM WGS tumor CPT0285670006 1c1ab64b-1728-442b-9e26-f37a1af24c9f_wgs_gdc_realn.bam 78477381968 BAM NA f5e56aed-38b7-45b3-aebe-8a1da8246495 029a28ed71de12c082a040f94b254548 hg38 Primary Tumor C3N-04312.WXS.N C3N-04312 GBM WXS blood_normal CPT0280980002 CPT0280980002.WholeExome.RP-1303.bam 21334418826 BAM NA bc94877a-1cb7-4597-8480-977e29c70ed4 0fa9d88614fb7cbb869ba1c932f223fc hg19 Blood Derived Normal C3N-04312.WXS.T C3N-04312 GBM WXS tumor CPT0285670006 CPT0285670006.WholeExome.RP-1303.bam 24513284506 BAM NA 930d98e1-e130-48bd-a15b-58abbaefcfb1 d1083ef1ef6807e26d8315a36ab52ee7 hg19 Primary Tumor C3N-04382.MethArray.Green.A C3N-04382 LUAD Methylation Array tissue_normal CPT0240680006 203561620080_R02C01_Grn.idat 13676226 IDAT Green 28023d7c-09c1-4396-9e1d-34c90d43e962 b37eaf7f93c0a7c7d5d0bc7355818fda NA Solid Tissue Normal @@ -31596,29 +32169,39 @@ C3N-04457.MethArray.Green.T C3N-04457 LSCC Methylation Array tumor CPT0259530006 C3N-04457.MethArray.Red.A C3N-04457 LSCC Methylation Array tissue_normal CPT0260800006 204372030074_R08C01_Red.idat 13677880 IDAT Red ed21dc13-4f36-4204-9a52-fa517f1080c3 d090203bb8de4f18574d15f0b823d417 NA Solid Tissue Normal C3N-04457.MethArray.Red.T C3N-04457 LSCC Methylation Array tumor CPT0259530006 204367490090_R06C01_Red.idat 13677885 IDAT Red 932a97b3-c545-4fc8-8e1d-bc188a51733b 70f9c7cf0b9d03c232d6924849889b17 NA Primary Tumor C3N-04457.miRNA-Seq.A C3N-04457 LSCC miRNA-Seq tissue_normal CPT0260800009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CTTGTA_S11_L007_R1_001.unaln.bam 259106673 BAM NA 71b321de-f02c-4a48-9d6f-631a6faf617e a75d8ff9286943d55912c3cf3487992a NA Solid Tissue Normal +C3N-04457.miRNA-Seq.A.hg38 C3N-04457 LSCC miRNA-Seq tissue_normal CPT0260800009 d2a4bcf5-ead1-4fa4-aae1-e0aa0aa35535_mirnaseq_gdc_realn.bam 287817777 BAM NA bcf61519-0bed-4b7c-b409-7067bd5533ea b192ea56d05a9c8b493caba28ebc90dd hg38 Solid Tissue Normal C3N-04457.miRNA-Seq.T C3N-04457 LSCC miRNA-Seq tumor CPT0259530009 200224_UNC31-K00269_0267_AHC722BBXY_CTTGTA_S12_L006_R1_001.unaln.bam 215997748 BAM NA 7b219143-5964-40ed-9049-d656a163dc6e dbbdba059fd3a6d3406289b12e5c718e NA Primary Tumor +C3N-04457.miRNA-Seq.T.hg38 C3N-04457 LSCC miRNA-Seq tumor CPT0259530009 c639be6a-5009-4d92-b78f-2e57b12894c7_mirnaseq_gdc_realn.bam 251350569 BAM NA ad4b750d-512f-4edc-ab4e-2a0c318ea16e 34e712d7d527eb1e361ddefb2c957718 hg38 Primary Tumor C3N-04457.RNA-Seq.R1.A C3N-04457 LSCC RNA-Seq tissue_normal CPT0260800009 200505_UNC31-K00269_0277_AHGFKNBBXY_AGCTCGCT-GCAGAATC_S9_L003_R1_001.fastq.gz 3326306536 FASTQ NA df26ed72-b1f1-4914-9c11-eb8480bf930e 57cdb3668f9a5301f02b6aff8289da54 NA Solid Tissue Normal C3N-04457.RNA-Seq.R1.T C3N-04457 LSCC RNA-Seq tumor CPT0259530009 200428_UNC32-K00270_0243_AHG3Y3BBXY_AGCTCGCT-GCAGAATC_S28_L007_R1_001.fastq.gz 3961330401 FASTQ NA 898b5235-d088-45e4-8efe-ba6402926ccd b3569ec2f3ca6144b08de16ccfc0057b NA Primary Tumor C3N-04457.RNA-Seq.R2.A C3N-04457 LSCC RNA-Seq tissue_normal CPT0260800009 200505_UNC31-K00269_0277_AHGFKNBBXY_AGCTCGCT-GCAGAATC_S9_L003_R2_001.fastq.gz 3699273678 FASTQ NA 563583e0-0013-45cd-b118-b3647d97e36c 932f4be16365aec5b7b84a9e3b860dbb NA Solid Tissue Normal C3N-04457.RNA-Seq.R2.T C3N-04457 LSCC RNA-Seq tumor CPT0259530009 200428_UNC32-K00270_0243_AHG3Y3BBXY_AGCTCGCT-GCAGAATC_S28_L007_R2_001.fastq.gz 4195125717 FASTQ NA 57a6f36d-d47f-489a-a05e-1067ecc7d2c3 c3b506a288be10f4ac582eff779e7942 NA Primary Tumor C3N-04457.WGS.N C3N-04457 LSCC WGS blood_normal CPT0260890002 CPT0260890002.WholeGenome.RP-2158.bam 22722416510 BAM NA d476de98-3d45-4779-b4dc-106df9fc41d2 89135bf228e5d3a0f8210ab41c8674cd hg19 Blood Derived Normal +C3N-04457.WGS.N.hg38 C3N-04457 LSCC WGS blood_normal CPT0260890002 0f0cf4d8-bb22-4f10-a486-5277dc30f309_wgs_gdc_realn.bam 67836384995 BAM NA 0fbcbb37-b611-468e-bd5a-ffa8a2c24894 ae1f46c1a4978752655934dab3088db3 hg38 Blood Derived Normal C3N-04457.WGS.T C3N-04457 LSCC WGS tumor CPT0259530006 CPT0259530006.WholeGenome.RP-2158.bam 26804357960 BAM NA bc9cbbde-681f-4653-9ee8-535cae46babc a81b63d713cd2f7253b5a1ca1a415dcb hg19 Primary Tumor +C3N-04457.WGS.T.hg38 C3N-04457 LSCC WGS tumor CPT0259530006 54c6972a-c420-4047-87bc-ed4566f36a28_wgs_gdc_realn.bam 81098989280 BAM NA 1832e3d6-cc03-4573-9524-0d738f7a7c48 8265eedae45fb44000f093a2452fae01 hg38 Primary Tumor C3N-04457.WXS.A C3N-04457 LSCC WXS tissue_normal CPT0260800006 CPT0260800006.WholeExome.RP-1303.bam 25612854584 BAM NA c5894f75-9dd0-4150-aa57-ce943642dbd8 aee1be2e5d003ab73f37e51fc85e17ed hg19 Solid Tissue Normal C3N-04457.WXS.N C3N-04457 LSCC WXS blood_normal CPT0260890002 CPT0260890002.WholeExome.RP-1303.bam 25601192662 BAM NA 48ac4e78-51f0-4ba9-9232-8468d3d4c1d3 ef74fbc91c92ead4093578ce2c510603 hg19 Blood Derived Normal +C3N-04457.WXS.T C3N-04457 LSCC WXS tumor CPT0259530006 CPT0259530006.WholeExome.RP-1303.bam 48860848917 BAM NA bf08a1fe-45ae-40bf-8ebf-e51316111b19 538c3f76f4c5db4ccde3464e87c24a45 hg19 Primary Tumor C3N-04609.MethArray.Green.A C3N-04609 LSCC Methylation Array tissue_normal CPT0261370005 204367470132_R08C01_Grn.idat 13677880 IDAT Green a26b7f92-262c-43e9-9648-98b95b68600b 5192bf0a203d483a4d68fcfd8b209faa NA Solid Tissue Normal C3N-04609.MethArray.Green.T C3N-04609 LSCC Methylation Array tumor CPT0261340006 204372030164_R06C01_Grn.idat 13677880 IDAT Green 2e9864a4-1838-4099-93ed-7dbe8f1cfbf0 520324062d73e260e3923d820362f31d NA Primary Tumor C3N-04609.MethArray.Red.A C3N-04609 LSCC Methylation Array tissue_normal CPT0261370005 204367470132_R08C01_Red.idat 13677880 IDAT Red 3f643a8c-4905-48c0-822f-ac3acd937ea2 e458de527ff8e41155153b8ca1a9d210 NA Solid Tissue Normal C3N-04609.MethArray.Red.T C3N-04609 LSCC Methylation Array tumor CPT0261340006 204372030164_R06C01_Red.idat 13677880 IDAT Red 07254326-2a17-4d1b-b8f7-ae256bcdb3a7 f806b876dde91b05667a8160dd431816 NA Primary Tumor C3N-04609.miRNA-Seq.A C3N-04609 LSCC miRNA-Seq tissue_normal CPT0261370008 200513_UNC31-K00269_0278_BHH7Y7BBXY_AGTCAA_S3_L007_R1_001.unaln.bam 222568926 BAM NA 2269b426-f76d-4c4b-92c1-7d4885ed1619 490ca374bbdc4d3c4f3f00f84db2db62 NA Solid Tissue Normal +C3N-04609.miRNA-Seq.A.hg38 C3N-04609 LSCC miRNA-Seq tissue_normal CPT0261370008 235a0352-a0b2-456e-95f2-7390ddb349d4_mirnaseq_gdc_realn.bam 247973059 BAM NA 9fee42d0-3240-4c38-af8b-c8b1c26f5eca 005ad79879245b35c2edd676cb98bf99 hg38 Solid Tissue Normal C3N-04609.miRNA-Seq.T C3N-04609 LSCC miRNA-Seq tumor CPT0261340013 200513_UNC31-K00269_0278_BHH7Y7BBXY_GTGGCC_S20_L007_R1_001.unaln.bam 248674397 BAM NA 71eec4ad-17eb-4c09-8273-6a55a9e597da 3cc8a3ce2bc51ac887b3ee6afbca93b4 NA Primary Tumor +C3N-04609.miRNA-Seq.T.hg38 C3N-04609 LSCC miRNA-Seq tumor CPT0261340013 06cea557-a625-4731-8a18-b619aa9934ee_mirnaseq_gdc_realn.bam 284213287 BAM NA 3bc28b79-e066-4b4c-9a90-640e29cfba46 81fef8f04593a5310e1931ab7277a10f hg38 Primary Tumor C3N-04609.RNA-Seq.R1.A C3N-04609 LSCC RNA-Seq tissue_normal CPT0261370008 200505_UNC31-K00269_0277_AHGFKNBBXY_CGGAACTG-CACTACGA_S14_L004_R1_001.fastq.gz 3732982453 FASTQ NA ce4b672d-2986-4efd-8b6d-86426216b967 6bf08b364fc611a2bdb675b0c05fa2d0 NA Solid Tissue Normal C3N-04609.RNA-Seq.R1.T C3N-04609 LSCC RNA-Seq tumor CPT0261340013 200505_UNC31-K00269_0277_AHGFKNBBXY_CCTTCACC-GACGCTCC_S18_L005_R1_001.fastq.gz 3478636597 FASTQ NA b52cfbeb-ce98-48a7-846c-1a2ff673ab54 6b0162b209f91ac0d79cb9186062a5b3 NA Primary Tumor C3N-04609.RNA-Seq.R2.A C3N-04609 LSCC RNA-Seq tissue_normal CPT0261370008 200505_UNC31-K00269_0277_AHGFKNBBXY_CGGAACTG-CACTACGA_S14_L004_R2_001.fastq.gz 4210861214 FASTQ NA f5303b74-aadb-4250-b358-5c3d17ff55d6 3d9237e82a479d1b8d3e0dd53fd5f861 NA Solid Tissue Normal C3N-04609.RNA-Seq.R2.T C3N-04609 LSCC RNA-Seq tumor CPT0261340013 200505_UNC31-K00269_0277_AHGFKNBBXY_CCTTCACC-GACGCTCC_S18_L005_R2_001.fastq.gz 3987460969 FASTQ NA 7f1a4de6-bc03-4692-a9f8-34013cafe9c4 6ba9759f70b3e4c02b4e329e6fadef84 NA Primary Tumor C3N-04609.WGS.N C3N-04609 LSCC WGS blood_normal CPT0261460002 CPT0261460002.WholeGenome.RP-2158.bam 20516376113 BAM NA 99a29d84-e542-46e3-9b4c-7fad31274873 b8688214ae6c19834cb8cc2644105e15 hg19 Blood Derived Normal +C3N-04609.WGS.N.hg38 C3N-04609 LSCC WGS blood_normal CPT0261460002 d2aedfb1-8888-46fa-b2a6-ed9137cf7761_wgs_gdc_realn.bam 61426023203 BAM NA ec37fbbc-6add-431e-813d-367d21742608 e1e5dd18467951818360e477849d5b6e hg38 Blood Derived Normal C3N-04609.WGS.T C3N-04609 LSCC WGS tumor CPT0261340006 CPT0261340006.WholeGenome.RP-2158.bam 26715338323 BAM NA 1a065183-b1a7-4217-9868-8d9609052dcc c9f774ef88c4570b1a8b2f9f986fbfdc hg19 Primary Tumor +C3N-04609.WGS.T.hg38 C3N-04609 LSCC WGS tumor CPT0261340006 daf0041e-8cbb-47d7-af99-edc911331d31_wgs_gdc_realn.bam 81346735687 BAM NA 1c4ef9fd-f19e-4a53-83e8-b1f50688373d 0c8f30320fa21666f218a1e06a857f44 hg38 Primary Tumor C3N-04609.WXS.A C3N-04609 LSCC WXS tissue_normal CPT0261370005 CPT0261370005.WholeExome.RP-1303.bam 26723176789 BAM NA 4084b28e-b032-4b6e-bc90-d4cdf25efdb6 27c799c43db0c70180ead0c7f7951255 hg19 Solid Tissue Normal C3N-04609.WXS.N C3N-04609 LSCC WXS blood_normal CPT0261460002 CPT0261460002.WholeExome.RP-1303.bam 22877534719 BAM NA bd043c7a-9ebb-411b-ba1a-5a8a0033eb01 c373851ceafb0e63cf0a9d0096747d64 hg19 Blood Derived Normal +C3N-04609.WXS.T C3N-04609 LSCC WXS tumor CPT0261340006 CPT0261340006.WholeExome.RP-1303.bam 46586664015 BAM NA 4df22dd4-2a05-42d5-b290-01e3b0f2e8f0 a67642c31abd1eda626ac96b2b8cad95 hg19 Primary Tumor C3N-04611.MethArray.Green.A C3N-04611 HNSCC Methylation Array tissue_normal CPT0261550006 203273200110_R07C01_Grn.idat 13676206 IDAT Green c9648bdd-17de-41a2-8bc7-ead15966e086 f90e35c0844adb1e85bc5c467b1c15b4 NA Solid Tissue Normal C3N-04611.MethArray.Green.T C3N-04611 HNSCC Methylation Array tumor CPT0261520006 203271750083_R06C01_Grn.idat 13676206 IDAT Green 31bf25a8-c0dd-4425-acda-c9ff72ec3647 fc736b7d631555ccd733ce190b7725e1 NA Primary Tumor C3N-04611.MethArray.Red.A C3N-04611 HNSCC Methylation Array tissue_normal CPT0261550006 203273200110_R07C01_Red.idat 13676206 IDAT Red c6ccd970-be33-4449-bf68-51dba9f4e90e 17d660bc04af9ef835ae654690eeb943 NA Solid Tissue Normal @@ -31650,78 +32233,104 @@ C3N-04611.WXS.T.hg38 C3N-04611 HNSCC WXS tumor CPT0261520006 6d4a2a29-c227-4878- C3N-04673.MethArray.Green.T C3N-04673 LSCC Methylation Array tumor CPT0293380006 204367490082_R06C01_Grn.idat 13677900 IDAT Green 900f1d06-fc5a-4bc2-9fa9-40b3ef521999 89d15ec195f07ebbd3e609600b38a880 NA Primary Tumor C3N-04673.MethArray.Red.T C3N-04673 LSCC Methylation Array tumor CPT0293380006 204367490082_R06C01_Red.idat 13677900 IDAT Red 2aa33831-946e-4150-8559-f858ec460128 193a6688f7c743798f7bfa4d621906ea NA Primary Tumor C3N-04673.miRNA-Seq.T C3N-04673 LSCC miRNA-Seq tumor CPT0293380009 200224_UNC31-K00269_0267_AHC722BBXY_ACTTGA_S8_L008_R1_001.unaln.bam 215568975 BAM NA 191d1827-ac93-4b43-8b01-2158ab10754e dfa2cf4e23d4b83034dc00ac57630798 NA Primary Tumor +C3N-04673.miRNA-Seq.T.hg38 C3N-04673 LSCC miRNA-Seq tumor CPT0293380009 b714587e-749d-4596-9125-9b9986813c78_mirnaseq_gdc_realn.bam 247746274 BAM NA e0bbd290-f0b8-45e3-89cc-24d8dd7e37f9 b3edff0bcb794db5a3d5b0047d6f41d6 hg38 Primary Tumor C3N-04673.RNA-Seq.R1.T C3N-04673 LSCC RNA-Seq tumor CPT0293380009 200505_UNC32-K00270_0245_AHH5FVBBXY_TGGATCGA-GTGCGATA_S8_L002_R1_001.fastq.gz 4368884839 FASTQ NA 6275c4d1-faa2-413a-b706-87387c66a97f b9d8c6a0dd3cd476c124a44236b9536c NA Primary Tumor C3N-04673.RNA-Seq.R2.T C3N-04673 LSCC RNA-Seq tumor CPT0293380009 200505_UNC32-K00270_0245_AHH5FVBBXY_TGGATCGA-GTGCGATA_S8_L002_R2_001.fastq.gz 4697890786 FASTQ NA 78930632-295f-491b-b11a-b6464128ac8b c6ce4647ab18358e2e78480da45d590d NA Primary Tumor C3N-04673.WGS.N C3N-04673 LSCC WGS blood_normal CPT0293420002 CPT0293420002.WholeGenome.RP-2158.bam 25389182238 BAM NA de2b554f-e7c2-493a-819e-81233c40c120 02f4c4e38c678dcfb370eca8c35ece8e hg19 Blood Derived Normal +C3N-04673.WGS.N.hg38 C3N-04673 LSCC WGS blood_normal CPT0293420002 2146b731-6763-48fb-a3eb-b18ee89cfb73_wgs_gdc_realn.bam 74356314911 BAM NA e54044d4-1010-4a9d-a0ae-fcc4b14d8126 2ebe242be637818d173ea615896d95f0 hg38 Blood Derived Normal C3N-04673.WGS.T C3N-04673 LSCC WGS tumor CPT0293380006 CPT0293380006.WholeGenome.RP-2158.bam 26421022844 BAM NA 1d027ec3-4a87-4b62-ad91-a760d6e8c94c e9fe1621062bf623a383ec6232054691 hg19 Primary Tumor +C3N-04673.WGS.T.hg38 C3N-04673 LSCC WGS tumor CPT0293380006 70db54d7-3201-4b69-bb47-74987b867428_wgs_gdc_realn.bam 77310697754 BAM NA 3aec8b92-8f04-4415-91a0-083e7d10a472 0f93fed350aa00fb17c6aa18d6450721 hg38 Primary Tumor C3N-04673.WXS.N C3N-04673 LSCC WXS blood_normal CPT0293420002 CPT0293420002.WholeExome.RP-1303.bam 22649994212 BAM NA 8d4d9609-468c-4b17-9c4d-ea76cfbd7f2f d2b278c40c09aa2131cc757720b0bab6 hg19 Blood Derived Normal C3N-04673.WXS.T C3N-04673 LSCC WXS tumor CPT0293380006 CPT0293380006.WholeExome.RP-1303.bam 19448785135 BAM NA c996f860-b7a0-4b27-9cc7-c7494df3801b fcc420f97db5ce1e762c583690c6bdfa hg19 Primary Tumor C3N-04683.MethArray.Green.T C3N-04683 GBM Methylation Array tumor CPT0293480006 204372030013_R02C01_Grn.idat 13677895 IDAT Green d483dd15-ca9e-4e49-8172-0335f7a7e064 a95f30665d4f21cf5175da9d71f58ef2 NA Primary Tumor C3N-04683.MethArray.Red.T C3N-04683 GBM Methylation Array tumor CPT0293480006 204372030013_R02C01_Red.idat 13677895 IDAT Red 218867cf-8cd8-43a3-ab6c-6459ee4a842a 2fbba98dc38ec29189f346e85cda4fe4 NA Primary Tumor C3N-04683.miRNA-Seq.T C3N-04683 GBM miRNA-Seq tumor CPT0293480009 200513_UNC31-K00269_0278_BHH7Y7BBXY_TCATTC_S45_L008_R1_001.unaln.bam 221888762 BAM NA 4cb38538-f774-49dd-b1f9-6cd0752fc269 fe119ff3ceb7c359bc555044bbd9affa NA Primary Tumor +C3N-04683.miRNA-Seq.T.hg38 C3N-04683 GBM miRNA-Seq tumor CPT0293480009 16109734-8b9d-4364-9c77-bacca3460cf4_mirnaseq_gdc_realn.bam 246174415 BAM NA 311a4ebe-7e72-4e55-a502-bd47c7a135a1 cae4d98340d45be7130a7ea7db450491 hg38 Primary Tumor C3N-04683.RNA-Seq.R1.T C3N-04683 GBM RNA-Seq tumor CPT0293480009 200218_UNC31-K00269_0266_AHGKHKBBXY_AGCTCGCT-GCAGAATC_S64_L007_R1_001.fastq.gz 3540596161 FASTQ NA 4501fe75-7e04-4fc8-9b96-80dc695086b6 0e4cf879fa33f40b221ceb74689ecf6e NA Primary Tumor C3N-04683.RNA-Seq.R2.T C3N-04683 GBM RNA-Seq tumor CPT0293480009 200218_UNC31-K00269_0266_AHGKHKBBXY_AGCTCGCT-GCAGAATC_S64_L007_R2_001.fastq.gz 3777387208 FASTQ NA e7334afa-2cbe-448d-9768-0bff2678dec7 6b87dfb9970d0cf2e5316a174e6d8577 NA Primary Tumor C3N-04683.WGS.N C3N-04683 GBM WGS blood_normal CPT0293500002 CPT0293500002.WholeGenome.RP-2158.bam 23861570825 BAM NA 069f7c09-b676-4e5a-ba82-2a9a294626e4 ccc32d0f3fc0645e429797f55e51564f hg19 Blood Derived Normal +C3N-04683.WGS.N.hg38 C3N-04683 GBM WGS blood_normal CPT0293500002 83bf1b55-2bfa-4587-a84d-8e413f9fb0c0_wgs_gdc_realn.bam 71643728765 BAM NA f3bee196-c66b-45c1-92f3-fb04a65c0b65 ccdfbbaeb5ce4a4620f1005631128dee hg38 Blood Derived Normal C3N-04683.WGS.T C3N-04683 GBM WGS tumor CPT0293480006 CPT0293480006.WholeGenome.RP-2158.bam 26158848666 BAM NA d33daf31-0425-4a15-8b2f-481a5eb955d3 7e58ca71df02cbbaff91ea66fdefc4c1 hg19 Primary Tumor +C3N-04683.WGS.T.hg38 C3N-04683 GBM WGS tumor CPT0293480006 caea80b3-44ef-4e4b-a5a5-91889e0ca761_wgs_gdc_realn.bam 78260836985 BAM NA 9e7543c1-4ea4-4c3c-96ca-788a5933eb1b 3842a14c65b9b5ff0e856fd1b2e1c3b5 hg38 Primary Tumor C3N-04683.WXS.N C3N-04683 GBM WXS blood_normal CPT0293500002 CPT0293500002.WholeExome.RP-1303.bam 23178721077 BAM NA c3760cf6-acd6-4c2e-8fb8-a1f0d09458bf 6c58fe6affa84fe7dcc4fe3258cf6727 hg19 Blood Derived Normal C3N-04683.WXS.T C3N-04683 GBM WXS tumor CPT0293480006 CPT0293480006.WholeExome.RP-1303.bam 20458737584 BAM NA ae7f4ae7-797e-4ad8-a827-1459e7f0c6b0 68f16ba08f498f521e88ec11ae39179d hg19 Primary Tumor C3N-04686.MethArray.Green.T C3N-04686 GBM Methylation Array tumor CPT0293570006 204367490084_R02C01_Grn.idat 13677890 IDAT Green 66a26213-a395-480b-9256-5abda11e2cf5 6b69a1776224b8c5df82d268a72584e8 NA Primary Tumor C3N-04686.MethArray.Red.T C3N-04686 GBM Methylation Array tumor CPT0293570006 204367490084_R02C01_Red.idat 13677890 IDAT Red b80b6883-9978-4079-83f6-221061a28c57 2c7736cb9a6f9eb1613fc473f56fc5ff NA Primary Tumor C3N-04686.miRNA-Seq.T C3N-04686 GBM miRNA-Seq tumor CPT0293570009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CCAACA_S36_L008_R1_001.unaln.bam 258556529 BAM NA caf47f87-2541-49f0-ad07-f4c0332f823c 1fb2bda6ad5031c47939141caab55161 NA Primary Tumor +C3N-04686.miRNA-Seq.T.hg38 C3N-04686 GBM miRNA-Seq tumor CPT0293570009 4ea5c927-9285-40e9-b09b-04885b88f969_mirnaseq_gdc_realn.bam 290410092 BAM NA 549a369e-c652-493b-a59b-a2ed261aa15f adeafb633053955ac290bdbe2310e9e1 hg38 Primary Tumor C3N-04686.RNA-Seq.R1.T C3N-04686 GBM RNA-Seq tumor CPT0293570009 200212_UNC31-K00269_0265_BHGCWGBBXY_AACAGGTT-ATACCAAG_S14_L004_R1_001.fastq.gz 4034400313 FASTQ NA 157280cb-210f-407f-997c-cbd5fbd18578 e0f8294a1eb035c954a3fbc05b11716d NA Primary Tumor C3N-04686.RNA-Seq.R2.T C3N-04686 GBM RNA-Seq tumor CPT0293570009 200212_UNC31-K00269_0265_BHGCWGBBXY_AACAGGTT-ATACCAAG_S14_L004_R2_001.fastq.gz 4294925927 FASTQ NA 6d47e078-6b42-4a7e-abcc-5a82b3dfd843 1721a99d2d7018e1c7e25d1ea23ff2ef NA Primary Tumor C3N-04686.WGS.N C3N-04686 GBM WGS blood_normal CPT0293620002 CPT0293620002.WholeGenome.RP-2158.bam 22070360060 BAM NA e8306e62-ec47-4ca0-b8ba-9fa4b7a668e7 b77b1506c350d139b34023b8960abd87 hg19 Blood Derived Normal +C3N-04686.WGS.N.hg38 C3N-04686 GBM WGS blood_normal CPT0293620002 04d7ff8e-1924-477d-a04b-5eaef2815a7d_wgs_gdc_realn.bam 66143723882 BAM NA 1617d7cd-32d7-40c4-92a8-c7d33265aeea 980bdbd23325fd3b1145f84b10c00cc6 hg38 Blood Derived Normal C3N-04686.WGS.T C3N-04686 GBM WGS tumor CPT0293570006 CPT0293570006.WholeGenome.RP-2158.bam 26806647950 BAM NA 224d7c26-b579-4717-864d-ea58579ea40f f4dc76a7a066aa6b0f1e837e42b51d66 hg19 Primary Tumor +C3N-04686.WGS.T.hg38 C3N-04686 GBM WGS tumor CPT0293570006 c5c81116-8317-4cbd-89c7-d189c6bd58d5_wgs_gdc_realn.bam 79483468119 BAM NA 59582a18-0dfc-420d-bfbd-dfd9aac6c58a 5daa3d0c2ef17566ace9771687e836d0 hg38 Primary Tumor C3N-04686.WXS.N C3N-04686 GBM WXS blood_normal CPT0293620002 CPT0293620002.WholeExome.RP-1303.bam 26880496920 BAM NA b2e7a4a2-092b-4219-9d0c-f194bde58697 52778880483816158cdc79715e542179 hg19 Blood Derived Normal C3N-04686.WXS.T C3N-04686 GBM WXS tumor CPT0293570006 CPT0293570006.WholeExome.RP-1303.bam 21163461417 BAM NA 4d9a0556-b68f-4487-ada6-7909db5d3e88 e8df2a60a50726cd0d820deadffe7504 hg19 Primary Tumor C3N-04691.MethArray.Green.T C3N-04691 GBM Methylation Array tumor CPT0293770006 204372030087_R03C01_Grn.idat 13677880 IDAT Green e6ee78a8-883c-4e1e-b06a-fd6adba317a5 c2c7fec8024b412ccdac55b4483d1280 NA Primary Tumor C3N-04691.MethArray.Red.T C3N-04691 GBM Methylation Array tumor CPT0293770006 204372030087_R03C01_Red.idat 13677880 IDAT Red c93601c7-11a6-48c9-abd0-438d65809d42 164f5511997b9881a45830151f569c28 NA Primary Tumor C3N-04691.miRNA-Seq.T C3N-04691 GBM miRNA-Seq tumor CPT0293770009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CATGGC_S34_L008_R1_001.unaln.bam 281130791 BAM NA 6d5df380-8272-4933-856f-c8c14cddf5ab 73e7bbc759479d193fc3c9f07a9bd616 NA Primary Tumor +C3N-04691.miRNA-Seq.T.hg38 C3N-04691 GBM miRNA-Seq tumor CPT0293770009 b802112b-e57a-481c-b292-a6560fb62db4_mirnaseq_gdc_realn.bam 306479091 BAM NA 4f19e4ce-59e2-4562-a3a7-d871d430abbe 7ec6c46dc0f0105dd46e9845cf1ef9eb hg38 Primary Tumor C3N-04691.RNA-Seq.R1.T C3N-04691 GBM RNA-Seq tumor CPT0293770009 200212_UNC31-K00269_0265_BHGCWGBBXY_ATATCTCG-ATCTTAGT_S12_L004_R1_001.fastq.gz 3454065249 FASTQ NA 8b611a73-3ec3-456e-95fd-6f25ee476c28 b987b9f75087bfbda8af2a1dc31860fe NA Primary Tumor C3N-04691.RNA-Seq.R2.T C3N-04691 GBM RNA-Seq tumor CPT0293770009 200212_UNC31-K00269_0265_BHGCWGBBXY_ATATCTCG-ATCTTAGT_S12_L004_R2_001.fastq.gz 3703572856 FASTQ NA 0a016bfe-4773-486e-be6e-af9ed353c9b5 b0f5d363b67f3f3bace1ca7b157c7bc9 NA Primary Tumor C3N-04691.WGS.N C3N-04691 GBM WGS blood_normal CPT0293790002 CPT0293790002.WholeGenome.RP-2158.bam 22737036630 BAM NA 9861bacf-115c-4f88-8afd-217c8e872070 9824c46fe95cd1ae4f8c42efc543be38 hg19 Blood Derived Normal +C3N-04691.WGS.N.hg38 C3N-04691 GBM WGS blood_normal CPT0293790002 cdd22aae-ff9d-430d-a275-1da5f8befaab_wgs_gdc_realn.bam 69525083202 BAM NA 7a1f5582-fc6d-4c7f-9da4-b605a67108ea 912fe36f73fd4c48ce1501cf7a2ab55a hg38 Blood Derived Normal C3N-04691.WGS.T C3N-04691 GBM WGS tumor CPT0293770006 CPT0293770006.WholeGenome.RP-2158.bam 26615436611 BAM NA 5b36d3a4-75cd-4f1d-bd42-a4465f2d1aaf 566348b7e5d3b25a08530ead22d3ce5c hg19 Primary Tumor +C3N-04691.WGS.T.hg38 C3N-04691 GBM WGS tumor CPT0293770006 c16ac24a-8463-4a2c-b866-a84b9a7fe0ee_wgs_gdc_realn.bam 79639650961 BAM NA 705077f1-277d-46d7-85d6-3248b1d8a3db ea67330b5b01823f3f65598678e8b479 hg38 Primary Tumor C3N-04691.WXS.N C3N-04691 GBM WXS blood_normal CPT0293790002 CPT0293790002.WholeExome.RP-1303.bam 27923809616 BAM NA 0140fcd4-d417-4363-9558-629a455e602f c124f5265b86601eb2d0b896fa9d4928 hg19 Blood Derived Normal C3N-04691.WXS.T C3N-04691 GBM WXS tumor CPT0293770006 CPT0293770006.WholeExome.RP-1303.bam 23083766040 BAM NA e22398a1-ddd9-4518-b3c2-6b3e978a87d4 d70e6cf1dbe1b3d2dd532f974945e36d hg19 Primary Tumor C3N-04693.MethArray.Green.T C3N-04693 GBM Methylation Array tumor CPT0293800006 204367460011_R06C01_Grn.idat 13677880 IDAT Green dc3cfb75-f88f-438e-aec1-92a275ef9172 55a91915bb7a9bcd8e658d84f3530a91 NA Primary Tumor C3N-04693.MethArray.Red.T C3N-04693 GBM Methylation Array tumor CPT0293800006 204367460011_R06C01_Red.idat 13677880 IDAT Red 9dd8897c-937f-4c68-9ed1-5150a59bbb16 854fbe168baaf4ef8f0407977f1ac04b NA Primary Tumor C3N-04693.miRNA-Seq.T C3N-04693 GBM miRNA-Seq tumor CPT0293800009 200224_UNC31-K00269_0267_AHC722BBXY_ATCACG_S1_L008_R1_001.unaln.bam 220351053 BAM NA 81b73edc-26ae-4642-9dd0-84e7340fd485 9d6e3626af40742d214c9e36908398d8 NA Primary Tumor +C3N-04693.miRNA-Seq.T.hg38 C3N-04693 GBM miRNA-Seq tumor CPT0293800009 307ae310-cd8b-4c18-aad1-2953d96267b7_mirnaseq_gdc_realn.bam 245401329 BAM NA c2efe5e4-452b-4071-a687-3f86307753dd 94d97309aab24a056fb28904502c2cb8 hg38 Primary Tumor C3N-04693.RNA-Seq.R1.T C3N-04693 GBM RNA-Seq tumor CPT0293800009 200505_UNC32-K00270_0245_AHH5FVBBXY_CCGCGGTT-AGCGCTAG_S1_L001_R1_001.fastq.gz 5469084994 FASTQ NA 95e19f64-f558-4704-b020-3cc06287e7f4 ebc4a382c65532a43ce9ee0e2293f80d NA Primary Tumor C3N-04693.RNA-Seq.R2.T C3N-04693 GBM RNA-Seq tumor CPT0293800009 200505_UNC32-K00270_0245_AHH5FVBBXY_CCGCGGTT-AGCGCTAG_S1_L001_R2_001.fastq.gz 6147478036 FASTQ NA 7144248c-c457-48a8-bd20-e742f014d9bd f527f436ba9c7a431eee4a2d0727cd91 NA Primary Tumor C3N-04693.WGS.N C3N-04693 GBM WGS blood_normal CPT0293830004 CPT0293830004.WholeGenome.RP-2158.bam 21452981251 BAM NA 7c393eae-279f-43bc-abec-5f4e84caa34c 5c1d1dcaa658498d07c25ca230c99c73 hg19 Blood Derived Normal +C3N-04693.WGS.N.hg38 C3N-04693 GBM WGS blood_normal CPT0293830004 b996ab8e-ae14-42ed-ac60-b74d932c0460_wgs_gdc_realn.bam 63795296473 BAM NA de5ee410-fb28-490e-81a9-60d05e4039f8 cf9ca1f955a3d39f484b2b8c719ccdbe hg38 Blood Derived Normal C3N-04693.WGS.T C3N-04693 GBM WGS tumor CPT0293800006 CPT0293800006.WholeGenome.RP-2158.bam 29358675954 BAM NA 3c2a3429-a00b-4aa5-958d-bdcadca1ac38 61683978f1356b0ec83cbd1ab98684ec hg19 Primary Tumor +C3N-04693.WGS.T.hg38 C3N-04693 GBM WGS tumor CPT0293800006 27f4dc0c-6231-4650-a00e-9ccc4e942c89_wgs_gdc_realn.bam 86972627335 BAM NA ccc9794f-4efc-4284-8b1c-2cb5fc33e957 2bec7b18592d28cbaeaf92aed7616d4f hg38 Primary Tumor C3N-04693.WXS.N C3N-04693 GBM WXS blood_normal CPT0293830004 CPT0293830004.WholeExome.RP-1303.bam 30028625002 BAM NA 03043151-b2c5-4e51-b2ce-677ad67c8b23 063ca8487e630fc42dd91e1cd782d50e hg19 Blood Derived Normal +C3N-04693.WXS.T C3N-04693 GBM WXS tumor CPT0293800006 CPT0293800006.WholeExome.RP-1303.bam 48569729300 BAM NA 3791b6fc-e492-439c-bf45-0095fcd1a11f 948fa883cd45db3a29f88947fd354182 hg19 Primary Tumor C3N-04701.MethArray.Green.A C3N-04701 LSCC Methylation Array tissue_normal CPT0293910006 204372030071_R04C01_Grn.idat 13677890 IDAT Green 66b97b36-668e-4403-8ee6-536d33bb103e a5217cbd2216c9ca96ec6a77659d953c NA Solid Tissue Normal C3N-04701.MethArray.Green.T C3N-04701 LSCC Methylation Array tumor CPT0293900006 204367470124_R05C01_Grn.idat 13677880 IDAT Green 21a0ab69-9a87-4632-be60-f3d49599d48f 3e2c4a7eb2a995e70159a40073826de0 NA Primary Tumor C3N-04701.MethArray.Red.A C3N-04701 LSCC Methylation Array tissue_normal CPT0293910006 204372030071_R04C01_Red.idat 13677890 IDAT Red cb6ae2a2-bc8c-4c3a-bab2-cbc8aabd0daa aa4fc0f7cbf86b8d40a59aaf54829bd0 NA Solid Tissue Normal C3N-04701.MethArray.Red.T C3N-04701 LSCC Methylation Array tumor CPT0293900006 204367470124_R05C01_Red.idat 13677880 IDAT Red f0f3926b-155f-45bb-b852-beff8ce019ac e0a7a89070c0864619d2bd951d8f2c8e NA Primary Tumor C3N-04701.miRNA-Seq.A C3N-04701 LSCC miRNA-Seq tissue_normal CPT0293910009 200325_UNC31-K00269_0272_AHHC2NBBXY_TCGAAG_S23_L001_R1_001.unaln.bam 241055591 BAM NA bfafa02e-f678-49ff-bf47-255455ca6fca 326abf3c7dc4cd679d71878a2de6c223 NA Solid Tissue Normal +C3N-04701.miRNA-Seq.A.hg38 C3N-04701 LSCC miRNA-Seq tissue_normal CPT0293910009 19a5f0a4-547c-44f3-bb29-9ea1a7da6e18_mirnaseq_gdc_realn.bam 264517897 BAM NA f130baa5-9fa6-43f2-9a93-03c16aa58ce8 1fcc290a73e354a615777b127e3cbeca hg38 Solid Tissue Normal C3N-04701.miRNA-Seq.T C3N-04701 LSCC miRNA-Seq tumor CPT0293900009 200224_UNC31-K00269_0267_AHC722BBXY_CAGATC_S7_L008_R1_001.unaln.bam 222982001 BAM NA b6e6e43a-7bcf-4366-b957-c2f084445703 be347253d6799a052f916aebabe5e5fe NA Primary Tumor +C3N-04701.miRNA-Seq.T.hg38 C3N-04701 LSCC miRNA-Seq tumor CPT0293900009 4e931765-e13d-42d2-ab5a-6c2535bf7202_mirnaseq_gdc_realn.bam 242228306 BAM NA b085f6cd-7cbb-4030-9071-44462b03cd5b e628d0e52ec171481f046e774aa3dc18 hg38 Primary Tumor C3N-04701.RNA-Seq.R1.A C3N-04701 LSCC RNA-Seq tissue_normal CPT0293910009 200428_UNC31-K00269_0275_AHGCJVBBXY_TCGATATC-ACACGAGT_S31_L008_R1_001.fastq.gz 4704619016 FASTQ NA b03b01be-db81-4ec8-b893-b790fcf1e565 11f722aed074c49688c3b841acdf82a3 NA Solid Tissue Normal C3N-04701.RNA-Seq.R1.T C3N-04701 LSCC RNA-Seq tumor CPT0293900009 200505_UNC32-K00270_0245_AHH5FVBBXY_CAAGCTAG-ACATAGCG_S7_L002_R1_001.fastq.gz 4667721275 FASTQ NA 57aa2d40-9195-48bf-b4a7-0b78a10f0d63 23558d866156b8caebc26d3d81327f8a NA Primary Tumor C3N-04701.RNA-Seq.R2.A C3N-04701 LSCC RNA-Seq tissue_normal CPT0293910009 200428_UNC31-K00269_0275_AHGCJVBBXY_TCGATATC-ACACGAGT_S31_L008_R2_001.fastq.gz 4833254640 FASTQ NA b5b589c7-bfd5-4bcd-ab33-1fdc83c57369 1f44389ee5686e091e2bd94020d26866 NA Solid Tissue Normal C3N-04701.RNA-Seq.R2.T C3N-04701 LSCC RNA-Seq tumor CPT0293900009 200505_UNC32-K00270_0245_AHH5FVBBXY_CAAGCTAG-ACATAGCG_S7_L002_R2_001.fastq.gz 4981914719 FASTQ NA 5b256c5e-2b30-4b00-8625-fe4cbd0945ff ab036cbf86edd457647abdcb2f334780 NA Primary Tumor C3N-04701.WGS.N C3N-04701 LSCC WGS blood_normal CPT0293940002 CPT0293940002.WholeGenome.RP-2158.bam 26367282623 BAM NA a5aff2c6-4bad-4e55-a2ae-95b3a1b565ce 2503592f22bd4e4a6c9eb2e7cbf6d0e4 hg19 Blood Derived Normal +C3N-04701.WGS.N.hg38 C3N-04701 LSCC WGS blood_normal CPT0293940002 dea222cc-4710-482a-b1b9-12cfc82f8bb2_wgs_gdc_realn.bam 78569442278 BAM NA ff0ab924-09a0-4169-af5a-304760c894ed 523eac379f87f7c22d7c3d14839a504a hg38 Blood Derived Normal C3N-04701.WGS.T C3N-04701 LSCC WGS tumor CPT0293900006 CPT0293900006.WholeGenome.RP-2158.bam 20944610111 BAM NA ee31857c-0abf-46b9-a02d-8f2744756492 44cbe31ff5815cab8cfdae4fb8c76e30 hg19 Primary Tumor +C3N-04701.WGS.T.hg38 C3N-04701 LSCC WGS tumor CPT0293900006 a5c1bd98-d6d5-4c56-9678-10c596b60c35_wgs_gdc_realn.bam 61905934854 BAM NA 5305bb2a-ddee-4206-92c2-f11f72ce674c 19866b70825ad9fcb7639dffe3a1e30b hg38 Primary Tumor C3N-04701.WXS.A C3N-04701 LSCC WXS tissue_normal CPT0293910006 CPT0293910006.WholeExome.RP-1303.bam 22600989093 BAM NA 91103f44-98d1-4887-9812-f22ba93822dc c9fb7d78392c105f686460d2c3e7f562 hg19 Solid Tissue Normal C3N-04701.WXS.N C3N-04701 LSCC WXS blood_normal CPT0293940002 CPT0293940002.WholeExome.RP-1303.bam 23155972575 BAM NA 87b838d9-7fff-4c39-932e-d48254c11488 9e1c373586687c8044649ac6f2201963 hg19 Blood Derived Normal C3N-04701.WXS.T C3N-04701 LSCC WXS tumor CPT0293900006 CPT0293900006.WholeExome.RP-1303.bam 19440348653 BAM NA 8f8f06d4-9072-4a56-93af-f0e315413f67 8393e5004d89e59c0f3d1f83a776081f hg19 Primary Tumor C3N-04713.MethArray.Green.T C3N-04713 LSCC Methylation Array tumor CPT0313120006 204367490029_R05C01_Grn.idat 13677885 IDAT Green 1bd8fef2-ccc4-4c6e-8d4b-04ad094720a3 e554ef86789865be10aacc7e9b5dafae NA Primary Tumor C3N-04713.MethArray.Red.T C3N-04713 LSCC Methylation Array tumor CPT0313120006 204367490029_R05C01_Red.idat 13677885 IDAT Red 1dbe1684-18a0-4adc-ae51-e4cde5c0571c 511a036ef1935f0ed46ed5e836ce8cf5 NA Primary Tumor C3N-04713.miRNA-Seq.T C3N-04713 LSCC miRNA-Seq tumor CPT0313120009 200224_UNC31-K00269_0267_AHC722BBXY_CTTGTA_S12_L008_R1_001.unaln.bam 230288131 BAM NA ec558bf0-e1bc-4bcc-9b1c-bc4a92624846 f68672e2c21ca79c6a5938aa404ab012 NA Primary Tumor +C3N-04713.miRNA-Seq.T.hg38 C3N-04713 LSCC miRNA-Seq tumor CPT0313120009 9894658b-47b8-4e37-85af-90fd8f09d0fa_mirnaseq_gdc_realn.bam 264922655 BAM NA a68a15f4-733e-48d1-ad81-d21e9c20ff95 34adab5e5b45e0e6c3eadcc6d429ce41 hg38 Primary Tumor C3N-04713.RNA-Seq.R1.T C3N-04713 LSCC RNA-Seq tumor CPT0313120009 200505_UNC32-K00270_0245_AHH5FVBBXY_CTCTCGTC-TATAACCT_S12_L003_R1_001.fastq.gz 3134777188 FASTQ NA 43d99717-abff-4560-9f61-c08b6ad51e3c a2fd337c2f186558dba29c41bcbd3c21 NA Primary Tumor C3N-04713.RNA-Seq.R2.T C3N-04713 LSCC RNA-Seq tumor CPT0313120009 200505_UNC32-K00270_0245_AHH5FVBBXY_CTCTCGTC-TATAACCT_S12_L003_R2_001.fastq.gz 3376812959 FASTQ NA 8e7a02ce-e64b-4058-89be-1e8bffab56b3 5bf32b14eb8341d3dcef56d5a9a18d15 NA Primary Tumor C3N-04713.WGS.N C3N-04713 LSCC WGS blood_normal CPT0313130002 CPT0313130002.WholeGenome.RP-2158.bam 23276517655 BAM NA 7a2bb22e-a421-459d-ac87-babf1cbd4c70 8498886175fdaf22c554ea90796b9c7c hg19 Blood Derived Normal +C3N-04713.WGS.N.hg38 C3N-04713 LSCC WGS blood_normal CPT0313130002 abcb9f24-8fc3-4847-81c8-9ba7a653708b_wgs_gdc_realn.bam 67710228475 BAM NA fe118dcc-3a00-4479-a4cb-afe06060bf5f 1bcb0fddf572e26d10c14e9a6ff632da hg38 Blood Derived Normal C3N-04713.WGS.T C3N-04713 LSCC WGS tumor CPT0313120006 CPT0313120006.WholeGenome.RP-2158.bam 23404441371 BAM NA 0d21369d-2dc9-4a55-99d8-8492870d4d99 fcf5bcfae633043b8ac059e0791f0a84 hg19 Primary Tumor +C3N-04713.WGS.T.hg38 C3N-04713 LSCC WGS tumor CPT0313120006 12d287b2-1cfd-443b-8d67-6b536b763eb1_wgs_gdc_realn.bam 68261205290 BAM NA f3b5fe92-eb38-46c1-a633-55a42207db59 66a7f3ebad7f2398a30f3927e42a66b5 hg38 Primary Tumor C3N-04713.WXS.N C3N-04713 LSCC WXS blood_normal CPT0313130002 CPT0313130002.WholeExome.RP-1303.bam 22118693722 BAM NA b4afbb1c-aa24-43ef-b213-5900d9801d8c 942442b51524137571f10604dc96b19d hg19 Blood Derived Normal C3N-04713.WXS.T C3N-04713 LSCC WXS tumor CPT0313120006 CPT0313120006.WholeExome.RP-1303.bam 19357417472 BAM NA b875dcb8-ba75-4cb9-836b-216481ad1d68 61deef7b6b9085f8cb690fc8834f5851 hg19 Primary Tumor C3N-05078.MethArray.Green.T C3N-05078 LSCC Methylation Array tumor CPT0313250006 204372030072_R05C01_Grn.idat 13677880 IDAT Green 0c5941e4-5d8b-4982-8232-976f7da14e88 71b4df69a73b6f9a2a46730bd40bdbbf NA Primary Tumor C3N-05078.MethArray.Red.T C3N-05078 LSCC Methylation Array tumor CPT0313250006 204372030072_R05C01_Red.idat 13677880 IDAT Red d685cbb0-0bc3-40aa-b0e4-a8c665b49e05 312d5c4d1ceb0f8b2e71d36c9901b104 NA Primary Tumor C3N-05078.miRNA-Seq.T C3N-05078 LSCC miRNA-Seq tumor CPT0313250009 200224_UNC31-K00269_0267_AHC722BBXY_AGTCAA_S13_L008_R1_001.unaln.bam 173285033 BAM NA b3646701-9a49-4df4-be37-c3a957a369e3 536bd3440d3fbbc05d480d627cc3f141 NA Primary Tumor +C3N-05078.miRNA-Seq.T.hg38 C3N-05078 LSCC miRNA-Seq tumor CPT0313250009 752c3d6f-ac79-4792-88f3-cc9159fe73db_mirnaseq_gdc_realn.bam 200095100 BAM NA 03d24c1d-c3df-4a47-b78a-4706f7c0a947 cbb3f952207203f3d5f3a7bed6d53031 hg38 Primary Tumor C3N-05078.RNA-Seq.R1.T C3N-05078 LSCC RNA-Seq tumor CPT0313250009 200505_UNC32-K00270_0245_AHH5FVBBXY_CCAAGTCT-AAGGATGA_S13_L004_R1_001.fastq.gz 4598103896 FASTQ NA 7b355ee0-226f-49a8-8e17-2063e5db5be2 6a312d28221324009efbb8bc04c12bd2 NA Primary Tumor C3N-05078.RNA-Seq.R2.T C3N-05078 LSCC RNA-Seq tumor CPT0313250009 200505_UNC32-K00270_0245_AHH5FVBBXY_CCAAGTCT-AAGGATGA_S13_L004_R2_001.fastq.gz 4948992963 FASTQ NA b207acd5-27e6-4f5e-ab9a-7e1188acef4c 0a53af8cf611af23e5524a7a36e2800d NA Primary Tumor C3N-05078.WGS.N C3N-05078 LSCC WGS blood_normal CPT0313270002 CPT0313270002.WholeGenome.RP-2158.bam 25476411907 BAM NA e64690b9-1ba0-4053-9664-0ed131d25e4e 723f9ba41a473f4c9541d6ec1073c1c8 hg19 Blood Derived Normal +C3N-05078.WGS.N.hg38 C3N-05078 LSCC WGS blood_normal CPT0313270002 0f680ce2-70af-4ffd-a3de-f38fd6d35eb2_wgs_gdc_realn.bam 75564564438 BAM NA aaca2d93-2662-44b2-b37b-e819c5a0d346 7441a14e68f85020222639949a63a972 hg38 Blood Derived Normal C3N-05078.WGS.T C3N-05078 LSCC WGS tumor CPT0313250006 CPT0313250006.WholeGenome.RP-2158.bam 22801546627 BAM NA d7d6fa47-c740-429e-b4e6-cb93f424e743 d30fd66a44eb18fb8d5f3143026e63ba hg19 Primary Tumor +C3N-05078.WGS.T.hg38 C3N-05078 LSCC WGS tumor CPT0313250006 81268520-0222-48f1-8b38-865b7d274018_wgs_gdc_realn.bam 65095127623 BAM NA ecbfef91-e2f0-4b29-926b-a3611f97331f f25bfc73faedd8252e1d0e9c3f48acf1 hg38 Primary Tumor C3N-05078.WXS.N C3N-05078 LSCC WXS blood_normal CPT0313270002 CPT0313270002.WholeExome.RP-1303.bam 20578360610 BAM NA b7d5c2c1-8528-445d-9edf-d9056a313599 670b085147ae24a8a58af9b6d20882d3 hg19 Blood Derived Normal C3N-05078.WXS.T C3N-05078 LSCC WXS tumor CPT0313250006 CPT0313250006.WholeExome.RP-1303.bam 18294804830 BAM NA 3758af49-c42a-43a2-a67b-726aa658e836 7aa0b2cd399de1200ed95fc64aa00d7b hg19 Primary Tumor C3N-05079.MethArray.Green.A C3N-05079 LSCC Methylation Array tissue_normal CPT0313290006 204372030015_R05C01_Grn.idat 13677905 IDAT Green 97021d71-211b-4710-9272-ffeaf0541dff 54ff7320fa908ac1c2b3cc98e9831584 NA Solid Tissue Normal @@ -31729,78 +32338,109 @@ C3N-05079.MethArray.Green.T C3N-05079 LSCC Methylation Array tumor CPT0313280006 C3N-05079.MethArray.Red.A C3N-05079 LSCC Methylation Array tissue_normal CPT0313290006 204372030015_R05C01_Red.idat 13677905 IDAT Red 0bdcc1b8-e5a9-4511-b9d0-14dbdb0b70b7 fc648b8f5c973a9f91600a9283f9786a NA Solid Tissue Normal C3N-05079.MethArray.Red.T C3N-05079 LSCC Methylation Array tumor CPT0313280006 204372030014_R03C01_Red.idat 13677895 IDAT Red 08957da0-8bba-4dc5-85ef-82699769ae8a feda12be01b612a6b346862a70253eac NA Primary Tumor C3N-05079.miRNA-Seq.A C3N-05079 LSCC miRNA-Seq tissue_normal CPT0313290009 200513_UNC31-K00269_0278_BHH7Y7BBXY_CGATGT_S9_L005_R1_001.unaln.bam 277897229 BAM NA db018ff5-134a-430c-87eb-8058a0ce0443 0365aff51ea74cb6106b2dffbfe51326 NA Solid Tissue Normal +C3N-05079.miRNA-Seq.A.hg38 C3N-05079 LSCC miRNA-Seq tissue_normal CPT0313290009 898fa3e8-e46f-4ac8-b2d2-9c9698b7deb7_mirnaseq_gdc_realn.bam 303461761 BAM NA 8b28f514-b3b9-4107-b077-d82a26dfb180 b3472dceec668303b0d856ffab3b4bac hg38 Solid Tissue Normal C3N-05079.miRNA-Seq.T C3N-05079 LSCC miRNA-Seq tumor CPT0313280009 200224_UNC31-K00269_0267_AHC722BBXY_AGTTCC_S14_L008_R1_001.unaln.bam 204307764 BAM NA 00e7ab76-7ea4-4b8a-8a84-483719bdb7d9 f848d0c7db846aff188a6e8837d8266c NA Primary Tumor +C3N-05079.miRNA-Seq.T.hg38 C3N-05079 LSCC miRNA-Seq tumor CPT0313280009 183f2d4c-8ad9-4d96-8cb8-8ae2bab551ba_mirnaseq_gdc_realn.bam 224251650 BAM NA ae68948d-311c-4f27-aded-43f77773e2ff 2145971f4011d47da589395c52d7b5fa hg38 Primary Tumor C3N-05079.RNA-Seq.R1.A C3N-05079 LSCC RNA-Seq tissue_normal CPT0313290009 200505_UNC32-K00270_0245_AHH5FVBBXY_TTATAACC-GATATCGA_S2_L005_R1_001.fastq.gz 4002383357 FASTQ NA f049a6c4-3d7d-4ef7-8b6c-388e6e91cbeb defa00bd94225a35335802ca666bc3d4 NA Solid Tissue Normal C3N-05079.RNA-Seq.R1.T C3N-05079 LSCC RNA-Seq tumor CPT0313280009 200505_UNC32-K00270_0245_AHH5FVBBXY_TTGGACTC-GGAAGCAG_S14_L004_R1_001.fastq.gz 3676782114 FASTQ NA 2ed19366-78ac-416b-9c74-585b2c05069d b6542365b97ae4ccbc910dd7189d5b76 NA Primary Tumor C3N-05079.RNA-Seq.R2.A C3N-05079 LSCC RNA-Seq tissue_normal CPT0313290009 200505_UNC32-K00270_0245_AHH5FVBBXY_TTATAACC-GATATCGA_S2_L005_R2_001.fastq.gz 4136253059 FASTQ NA f24ce64f-02cc-40a6-a3ea-150c7dd88dae e1fd5408f037976109d4025bde5aa1f2 NA Solid Tissue Normal C3N-05079.RNA-Seq.R2.T C3N-05079 LSCC RNA-Seq tumor CPT0313280009 200505_UNC32-K00270_0245_AHH5FVBBXY_TTGGACTC-GGAAGCAG_S14_L004_R2_001.fastq.gz 3908549524 FASTQ NA b52bc76f-30d1-40fc-a3d0-c30e7c35fa05 e9a049f694bac4b45937c372c5bd59f5 NA Primary Tumor C3N-05079.WGS.N C3N-05079 LSCC WGS blood_normal CPT0313300002 CPT0313300002.WholeGenome.RP-2158.bam 21731961742 BAM NA 2d317f20-578a-4417-9c62-9e1610973ac0 9e94f25c9b3a13eeb1fd48fd3237099d hg19 Blood Derived Normal +C3N-05079.WGS.N.hg38 C3N-05079 LSCC WGS blood_normal CPT0313300002 cc6e30e4-a477-48c7-b201-528211f3d5df_wgs_gdc_realn.bam 65080632447 BAM NA 77f97a94-18b9-4cb0-8b97-498eb2a9b441 ec8ff425188cb19f5281626876224c89 hg38 Blood Derived Normal C3N-05079.WGS.T C3N-05079 LSCC WGS tumor CPT0313280006 CPT0313280006.WholeGenome.RP-2158.bam 24614136960 BAM NA a82cf098-ab13-4cd1-ae24-cff89ea736e3 06bdcfd8363d42f4b3e4439e0276ea4f hg19 Primary Tumor +C3N-05079.WGS.T.hg38 C3N-05079 LSCC WGS tumor CPT0313280006 7c9f892f-1bd3-492d-bae7-09c323a90ab8_wgs_gdc_realn.bam 72412570414 BAM NA 191a2a9b-da05-4186-8e73-a43dad489dcb be1448153309ecea7087da7860c85bb9 hg38 Primary Tumor +C3N-05079.WXS.A C3N-05079 LSCC WXS tissue_normal CPT0313290006 CPT0313290006.WholeExome.RP-1303.bam 36965491616 BAM NA 582baa68-d439-4451-bd72-612fb5f1e9ed e8417787cd87bc02a2fef4ee1c6fb894 hg19 Solid Tissue Normal C3N-05079.WXS.N C3N-05079 LSCC WXS blood_normal CPT0313300002 CPT0313300002.WholeExome.RP-1303.bam 24320660645 BAM NA c79deaae-9a05-447a-b745-4fed2ce27b81 175a230cda408fdd318908109d2a5249 hg19 Blood Derived Normal C3N-05079.WXS.T C3N-05079 LSCC WXS tumor CPT0313280006 CPT0313280006.WholeExome.RP-1303.bam 19776372856 BAM NA fce6011a-c75a-4e4a-9afc-5c36ae9c4698 9930ef3d61077859c44c358ec6b23867 hg19 Primary Tumor C3N-05080.MethArray.Green.T C3N-05080 LSCC Methylation Array tumor CPT0321640006 204372030085_R06C01_Grn.idat 13677880 IDAT Green 907f452c-a0db-4fbc-a58d-7188ae512cf1 367be7a29328b334dc32de14b9b8c7fd NA Primary Tumor C3N-05080.MethArray.Red.T C3N-05080 LSCC Methylation Array tumor CPT0321640006 204372030085_R06C01_Red.idat 13677880 IDAT Red 252d6d54-d5ce-4a9c-bfb8-a9d3a6c95c5e 7123562e6f9dcf5643387bdd0b67c494 NA Primary Tumor C3N-05080.miRNA-Seq.T C3N-05080 LSCC miRNA-Seq tumor CPT0321640009 200224_UNC31-K00269_0267_AHC722BBXY_GACGAC_S41_L007_R1_001.unaln.bam 234621804 BAM NA d41874e9-10da-4c02-94f0-03b3caee5931 2df4bc97021a5d0f9f4d5cad0fa0d585 NA Primary Tumor +C3N-05080.miRNA-Seq.T.hg38 C3N-05080 LSCC miRNA-Seq tumor CPT0321640009 73f1bc52-433a-4a9b-a3fd-37d871f3dfd0_mirnaseq_gdc_realn.bam 260564259 BAM NA 2f921283-151e-4282-a1bf-16c4226cb0b8 9759d158dad57a31e4eb7a404616d36e hg38 Primary Tumor C3N-05080.RNA-Seq.R1.T C3N-05080 LSCC RNA-Seq tumor CPT0321640009 200428_UNC32-K00270_0243_AHG3Y3BBXY_ATATGGAT-CTGTATTA_S9_L003_R1_001.fastq.gz 5320575999 FASTQ NA b5efa31d-accd-4914-9142-7e7b1a89170e 51b3b22e41e48c08e5639527dcf76398 NA Primary Tumor C3N-05080.RNA-Seq.R2.T C3N-05080 LSCC RNA-Seq tumor CPT0321640009 200428_UNC32-K00270_0243_AHG3Y3BBXY_ATATGGAT-CTGTATTA_S9_L003_R2_001.fastq.gz 5656817918 FASTQ NA a7e0434d-6689-4831-b5ff-0df17c1f3191 b1a505b0feb29a82f72fd98ccd236cd5 NA Primary Tumor C3N-05080.WGS.N C3N-05080 LSCC WGS blood_normal CPT0321670002 CPT0321670002.WholeGenome.RP-2158.bam 32117416863 BAM NA 1065f29d-90b1-4b01-80a4-bc728f1f4480 e9b11e9fa5b8c48977f4905232e86df6 hg19 Blood Derived Normal +C3N-05080.WGS.N.hg38 C3N-05080 LSCC WGS blood_normal CPT0321670002 7ab7860a-416f-40a9-ad13-90c49c392507_wgs_gdc_realn.bam 94869815892 BAM NA fede5ded-dfdb-46d0-a96c-db681ead09da e9262813c7f03216fdb139f28853b5e6 hg38 Blood Derived Normal C3N-05080.WGS.T C3N-05080 LSCC WGS tumor CPT0321640006 CPT0321640006.WholeGenome.RP-2158.bam 23242180231 BAM NA 5dbde3eb-5a93-4395-93c2-bff51e805c81 7ab44b26d1dfbea222fc3d631b677fbf hg19 Primary Tumor +C3N-05080.WGS.T.hg38 C3N-05080 LSCC WGS tumor CPT0321640006 9e4c78c3-fe39-47ab-8ede-e7a9843de8ae_wgs_gdc_realn.bam 68949469409 BAM NA 188683b2-4b05-4ba7-af25-da55de8055fe de07f5ec2c7f23b84133e3a91e035543 hg38 Primary Tumor C3N-05080.WXS.N C3N-05080 LSCC WXS blood_normal CPT0321670002 CPT0321670002.WholeExome.RP-1303.bam 22201659914 BAM NA 058b9ed9-7b8d-4cb6-bbc6-9d3edbe74a8e 3b209909315908943812243c1e575a49 hg19 Blood Derived Normal +C3N-05080.WXS.T C3N-05080 LSCC WXS tumor CPT0321640006 CPT0321640006.WholeExome.RP-1303.bam 31591593862 BAM NA 5bf69ea5-7618-4046-9487-4f281533b64d fe3538fe2ed54323e454975b131583d8 hg19 Primary Tumor C3N-05100.MethArray.Green.T C3N-05100 LSCC Methylation Array tumor CPT0321680006 204372030023_R06C01_Grn.idat 13677895 IDAT Green 42ea3db3-7878-4d91-b7df-10969ada1006 30a9c32459d689e4e3daf2fc43b3e232 NA Primary Tumor C3N-05100.MethArray.Red.T C3N-05100 LSCC Methylation Array tumor CPT0321680006 204372030023_R06C01_Red.idat 13677895 IDAT Red a42733c2-680c-48ae-9dc9-05063e929cb7 f7361203d4e0e9e65e189cfa3b49a2d1 NA Primary Tumor C3N-05100.miRNA-Seq.T C3N-05100 LSCC miRNA-Seq tumor CPT0321680009 200224_UNC31-K00269_0267_AHC722BBXY_GTTTCG_S21_L008_R1_001.unaln.bam 205266159 BAM NA 089f3849-cf1f-43fa-ac2a-5f52e90983be 0473fd72d896d6cf03b9da1e588a24c9 NA Primary Tumor +C3N-05100.miRNA-Seq.T.hg38 C3N-05100 LSCC miRNA-Seq tumor CPT0321680009 0337b011-ac73-49e8-b392-60604c3a9de4_mirnaseq_gdc_realn.bam 229694116 BAM NA 1c629d09-b8d4-4947-aba8-87570144fc1f 1b41bf24675d60bc5438d6d5b1cf8863 hg38 Primary Tumor C3N-05100.RNA-Seq.R1.T C3N-05100 LSCC RNA-Seq tumor CPT0321680009 200428_UNC31-K00269_0276_BHH5TMBBXY_GGTACCTT-AAGACGTC_S5_L002_R1_001.fastq.gz 3707066529 FASTQ NA 94e80fa3-c4d8-4da0-97e7-da399c4939a1 d1815b8fb5167b5a84f3678434acaee4 NA Primary Tumor C3N-05100.RNA-Seq.R2.T C3N-05100 LSCC RNA-Seq tumor CPT0321680009 200428_UNC31-K00269_0276_BHH5TMBBXY_GGTACCTT-AAGACGTC_S5_L002_R2_001.fastq.gz 4036803940 FASTQ NA b2c5daa7-707a-4c87-bf16-6b740134c2d1 f045608be98f734a412867a6c1c2c96a NA Primary Tumor C3N-05100.WGS.N C3N-05100 LSCC WGS blood_normal CPT0321700002 CPT0321700002.WholeGenome.RP-2158.bam 21048768435 BAM NA c101d28b-617b-4116-9e7a-fd62285e618c a11eb31e2ab754c9d7d9a06e58ec231f hg19 Blood Derived Normal +C3N-05100.WGS.N.hg38 C3N-05100 LSCC WGS blood_normal CPT0321700002 39264da6-4d0b-43d6-acb1-0bbfa21ffd9e_wgs_gdc_realn.bam 62286351996 BAM NA b8b94e9d-6a7a-4761-8bdc-bff67dd8fb8f d84c0504175233379452d1717621ef46 hg38 Blood Derived Normal C3N-05100.WGS.T C3N-05100 LSCC WGS tumor CPT0321680006 CPT0321680006.WholeGenome.RP-2158.bam 19457716420 BAM NA 9d0e5861-56dd-4a2f-9116-5b46bca16e5a 9fa589440659bfbc2af17a9bedc8624b hg19 Primary Tumor +C3N-05100.WGS.T.hg38 C3N-05100 LSCC WGS tumor CPT0321680006 5ef62f88-5293-4a68-a523-50eacbd2dc9b_wgs_gdc_realn.bam 57763506632 BAM NA e32667cf-b7d8-4ec2-a63a-17497134fd97 ba9021d94738e48f04aa2d8c66920b68 hg38 Primary Tumor +C3N-05100.WXS.N C3N-05100 LSCC WXS blood_normal CPT0321700002 CPT0321700002.WholeExome.RP-1303.bam 38754948621 BAM NA 14271093-70ba-4c84-8e18-5dbeb8e147b5 19c6fd77d7b53b764b461c9bc5af9acc hg19 Blood Derived Normal C3N-05100.WXS.T C3N-05100 LSCC WXS tumor CPT0321680006 CPT0321680006.WholeExome.RP-1303.bam 19296245113 BAM NA 5be5ff5d-0747-4e96-af04-8826353653d4 ff4ee76a5bd934ed907e29bc5ed8e1c9 hg19 Primary Tumor C3N-05629.MethArray.Green.A C3N-05629 LSCC Methylation Array tissue_normal CPT0321770006 204372030090_R08C01_Grn.idat 13677880 IDAT Green 6b68145b-a296-4fab-8e94-f5f8d325faf7 607b624f10a0e5e83411f04c5aac528c NA Solid Tissue Normal C3N-05629.MethArray.Green.T C3N-05629 LSCC Methylation Array tumor CPT0321760006 204367490066_R05C01_Grn.idat 13677900 IDAT Green 543b66ab-9f4f-49d3-865e-e6cbafe9419a 4bc8903d923903e6cd7d14fe2168e384 NA Primary Tumor C3N-05629.MethArray.Red.A C3N-05629 LSCC Methylation Array tissue_normal CPT0321770006 204372030090_R08C01_Red.idat 13677880 IDAT Red a660e408-0bb5-45a3-b749-ea1709dd30b0 9d82b2850bada7be0d9751f1bc1b8532 NA Solid Tissue Normal C3N-05629.MethArray.Red.T C3N-05629 LSCC Methylation Array tumor CPT0321760006 204367490066_R05C01_Red.idat 13677900 IDAT Red a8a9573d-404b-4677-bc06-aa602cefba95 6455b01371f71d8c3ebc8e940ce04205 NA Primary Tumor C3N-05629.miRNA-Seq.A C3N-05629 LSCC miRNA-Seq tissue_normal CPT0321770009 200325_UNC31-K00269_0272_AHHC2NBBXY_CATGGC_S10_L001_R1_001.unaln.bam 254242993 BAM NA fd7c5570-69f2-4cb7-a81b-69e968eac396 31335d0b958175dbfc1ec2791f95d87c NA Solid Tissue Normal +C3N-05629.miRNA-Seq.A.hg38 C3N-05629 LSCC miRNA-Seq tissue_normal CPT0321770009 b2973002-6eba-4812-8ab4-d07288040c7f_mirnaseq_gdc_realn.bam 286232027 BAM NA 93aff772-d665-49d9-9065-0e34c106c1f2 be634416488ca5d3192b5af9a04a9660 hg38 Solid Tissue Normal C3N-05629.miRNA-Seq.T C3N-05629 LSCC miRNA-Seq tumor CPT0321760009 200224_UNC31-K00269_0267_AHC722BBXY_CGTACG_S22_L008_R1_001.unaln.bam 173798048 BAM NA 5514129f-9993-4002-83a2-ddeeeed401d7 ef606d3f015f18f809c0de4d154e4c64 NA Primary Tumor +C3N-05629.miRNA-Seq.T.hg38 C3N-05629 LSCC miRNA-Seq tumor CPT0321760009 1028ebdd-8b23-4022-9c09-5bebcf3c748c_mirnaseq_gdc_realn.bam 198771303 BAM NA a4946480-8392-418f-af8b-807af46b7059 f0176290212ef0c1f4b3360101f04243 hg38 Primary Tumor C3N-05629.RNA-Seq.R1.A C3N-05629 LSCC RNA-Seq tissue_normal CPT0321770009 200428_UNC31-K00269_0275_AHGCJVBBXY_GGTCACGA-GTATTATG_S18_L005_R1_001.fastq.gz 3782320688 FASTQ NA 1a8f0eef-c9ac-4a60-bb7f-d7898d725906 a062246f5bc7b5accf678c4f7a64e6bf NA Solid Tissue Normal C3N-05629.RNA-Seq.R1.T C3N-05629 LSCC RNA-Seq tumor CPT0321760009 200428_UNC31-K00269_0276_BHH5TMBBXY_AACGTTCC-GGAGTACT_S6_L002_R1_001.fastq.gz 2467086846 FASTQ NA 7f49c621-13e9-4e66-90e3-afc5545d86de de49766cbe860c648571c50083ee6fd3 NA Primary Tumor C3N-05629.RNA-Seq.R2.A C3N-05629 LSCC RNA-Seq tissue_normal CPT0321770009 200428_UNC31-K00269_0275_AHGCJVBBXY_GGTCACGA-GTATTATG_S18_L005_R2_001.fastq.gz 3985887125 FASTQ NA 720bf299-c055-4193-98ef-eb0a651454bc 374a2a135288bb590ec601cb6dd22e81 NA Solid Tissue Normal C3N-05629.RNA-Seq.R2.T C3N-05629 LSCC RNA-Seq tumor CPT0321760009 200428_UNC31-K00269_0276_BHH5TMBBXY_AACGTTCC-GGAGTACT_S6_L002_R2_001.fastq.gz 2680135041 FASTQ NA 8da05c95-0d72-4ac1-84f7-439baa0626f7 792bb14235051c7cc28529648f2e0c67 NA Primary Tumor C3N-05629.WGS.N C3N-05629 LSCC WGS blood_normal CPT0321800002 CPT0321800002.WholeGenome.RP-2158.bam 25902474734 BAM NA b584ba5a-f4cf-45db-a416-bde48302c251 2c9e475210c1fc1695d7e8a9dcec44ad hg19 Blood Derived Normal +C3N-05629.WGS.N.hg38 C3N-05629 LSCC WGS blood_normal CPT0321800002 52e2a19b-f6a8-4484-86b7-fed2cb4438e9_wgs_gdc_realn.bam 75748276047 BAM NA f50609fc-9226-4f82-a225-48e4491d6e1a 9a6061f78f38ceb4c5d5eb36dbd2da82 hg38 Blood Derived Normal C3N-05629.WGS.T C3N-05629 LSCC WGS tumor CPT0321760006 CPT0321760006.WholeGenome.RP-2158.bam 21989426422 BAM NA 05d48fce-fcee-410e-a1c2-1eee0b197061 4f4736a09da0381d54c31b059942db96 hg19 Primary Tumor +C3N-05629.WGS.T.hg38 C3N-05629 LSCC WGS tumor CPT0321760006 392cdd57-f49f-436c-88b4-556f2a60586a_wgs_gdc_realn.bam 64929840130 BAM NA c1ae0af0-8e3d-48fd-81da-7364eaca0c00 27bfb8ba6367b5311312d96ea3e3f25d hg38 Primary Tumor C3N-05629.WXS.A C3N-05629 LSCC WXS tissue_normal CPT0321770006 CPT0321770006.WholeExome.RP-1303.bam 22527659093 BAM NA fa90e122-5917-4f5c-b41e-1c2332206a71 0ab055497497378b3c1a65f8682ed14a hg19 Solid Tissue Normal C3N-05629.WXS.N C3N-05629 LSCC WXS blood_normal CPT0321800002 CPT0321800002.WholeExome.RP-1303.bam 22001185146 BAM NA b7cdef42-55a8-49c0-a8eb-b2c22fc4949b b955970b83e5bae0952a9b52f94d6126 hg19 Blood Derived Normal +C3N-05629.WXS.T C3N-05629 LSCC WXS tumor CPT0321760006 CPT0321760006.WholeExome.RP-1303.bam 41572110141 BAM NA 129764fd-45fa-4597-81ab-84dec556f710 2fbd06437bf0f65caede964f3c0d1773 hg19 Primary Tumor C3N-05914.MethArray.Green.A C3N-05914 LSCC Methylation Array tissue_normal CPT0322020006 204372030090_R07C01_Grn.idat 13677880 IDAT Green d0164af3-cefb-46d3-b903-c0b749106a98 31382a95b6296dd7c5cf380e9ea81842 NA Solid Tissue Normal C3N-05914.MethArray.Green.T C3N-05914 LSCC Methylation Array tumor CPT0322010006 204367490090_R04C01_Grn.idat 13677885 IDAT Green 510ff8df-45b6-4d5e-b111-4e903d5bb900 99c11d9a89f102ac8fe9558ebb6013d0 NA Primary Tumor C3N-05914.MethArray.Red.A C3N-05914 LSCC Methylation Array tissue_normal CPT0322020006 204372030090_R07C01_Red.idat 13677880 IDAT Red d760444a-9029-4c3c-a9f5-8fc189c55243 9557107e7fd0e94d2ebb4cf77acca921 NA Solid Tissue Normal C3N-05914.MethArray.Red.T C3N-05914 LSCC Methylation Array tumor CPT0322010006 204367490090_R04C01_Red.idat 13677885 IDAT Red b068e432-3af2-4377-adda-326276089788 6611e3789381f1c436b17e0bdd7897ab NA Primary Tumor C3N-05914.miRNA-Seq.A C3N-05914 LSCC miRNA-Seq tissue_normal CPT0322020009 200325_UNC31-K00269_0272_AHHC2NBBXY_CATTTT_S11_L001_R1_001.unaln.bam 253845612 BAM NA d1bfcda8-a0e7-486c-a75c-c6aa2abf1d20 4ed74a0f2c122765a34923a0a6588e1c NA Solid Tissue Normal +C3N-05914.miRNA-Seq.A.hg38 C3N-05914 LSCC miRNA-Seq tissue_normal CPT0322020009 1d7e1bbf-cfaa-4c41-a5aa-9421e23a7bb4_mirnaseq_gdc_realn.bam 280267722 BAM NA 80f93150-ede2-4400-ad96-b084ef83c68b b15e69eb9b1878a44291cc74cbfc24a2 hg38 Solid Tissue Normal C3N-05914.miRNA-Seq.T C3N-05914 LSCC miRNA-Seq tumor CPT0322010009 200224_UNC31-K00269_0267_AHC722BBXY_GAGTGG_S23_L008_R1_001.unaln.bam 198641139 BAM NA 3e90ad97-3e9f-4f35-b740-8dffbed311e6 b7f82613524d32ae6ab63b4377483c0e NA Primary Tumor +C3N-05914.miRNA-Seq.T.hg38 C3N-05914 LSCC miRNA-Seq tumor CPT0322010009 62f8f709-a6e7-4603-b9c3-30bd40db2b18_mirnaseq_gdc_realn.bam 221125816 BAM NA 82538b6f-3a7c-4ff6-90f8-d353d6c692a6 04a019c5d388f33d5ba33c10eae93d93 hg38 Primary Tumor C3N-05914.RNA-Seq.R1.A C3N-05914 LSCC RNA-Seq tissue_normal CPT0322020009 200428_UNC31-K00269_0275_AHGCJVBBXY_CTGCTTCC-GATAGATC_S19_L005_R1_001.fastq.gz 3400862397 FASTQ NA 58847338-77fa-4225-ae9a-d7cabe9abcc3 cd894b5a439454dc9fe082165420865d NA Solid Tissue Normal C3N-05914.RNA-Seq.R1.T C3N-05914 LSCC RNA-Seq tumor CPT0322010009 200428_UNC31-K00269_0276_BHH5TMBBXY_GCAGAATT-ACCGGCCA_S7_L002_R1_001.fastq.gz 5267685992 FASTQ NA 42619f5f-391a-4775-a515-1b5714a90f1b 42e685f48158091e501cd860d394ce0b NA Primary Tumor C3N-05914.RNA-Seq.R2.A C3N-05914 LSCC RNA-Seq tissue_normal CPT0322020009 200428_UNC31-K00269_0275_AHGCJVBBXY_CTGCTTCC-GATAGATC_S19_L005_R2_001.fastq.gz 3556116993 FASTQ NA a2209efe-30e2-43b0-88d0-736412de5aaa a1133fdf11e9e86422bd6148babb595c NA Solid Tissue Normal C3N-05914.RNA-Seq.R2.T C3N-05914 LSCC RNA-Seq tumor CPT0322010009 200428_UNC31-K00269_0276_BHH5TMBBXY_GCAGAATT-ACCGGCCA_S7_L002_R2_001.fastq.gz 5750197657 FASTQ NA 3931c065-87df-472d-9583-a9be46390ee2 9d1cb10fc438db736a910c8425929c5f NA Primary Tumor C3N-05914.WGS.N C3N-05914 LSCC WGS blood_normal CPT0322050002 CPT0322050002.WholeGenome.RP-2158.bam 23229715209 BAM NA ed727cd1-4f92-4f4a-8de5-b393ef901fa5 c34e9e068a7f6d8675285ee98ea1ae61 hg19 Blood Derived Normal +C3N-05914.WGS.N.hg38 C3N-05914 LSCC WGS blood_normal CPT0322050002 8f68f68a-13a5-4085-a115-17a6701ab6fd_wgs_gdc_realn.bam 67977021003 BAM NA a5b9dad9-61b5-4b00-b76e-d1964d9932bb a842e826b2363e2677297c5c90a14f69 hg38 Blood Derived Normal C3N-05914.WGS.T C3N-05914 LSCC WGS tumor CPT0322010006 CPT0322010006.WholeGenome.RP-2158.bam 22813058414 BAM NA 43e756e2-8ea2-4a9e-ba9b-81afc437782d 21a6f1c0b18a3ffb0180b59c02663bf6 hg19 Primary Tumor +C3N-05914.WGS.T.hg38 C3N-05914 LSCC WGS tumor CPT0322010006 50080744-d8e0-430b-93a5-77eddd53834b_wgs_gdc_realn.bam 68191898266 BAM NA e7d3a961-5650-41cd-856b-3073994a9331 ce3c392c4e1e02cbc9d22bc9c033ea69 hg38 Primary Tumor +C3N-05914.WXS.A C3N-05914 LSCC WXS tissue_normal CPT0322020006 CPT0322020006.WholeExome.RP-1303.bam 36726728652 BAM NA 5b551d44-9864-4f54-ad1d-b60ef1046e5c e66b2318a65cb185ddc76c37f7499c39 hg19 Solid Tissue Normal C3N-05914.WXS.N C3N-05914 LSCC WXS blood_normal CPT0322050002 CPT0322050002.WholeExome.RP-1303.bam 23391847397 BAM NA 0de1bd67-5646-4e9b-9fc8-131bf2c6a5fa a26eb2b149ce409c0534ba2d49665958 hg19 Blood Derived Normal +C3N-05914.WXS.T C3N-05914 LSCC WXS tumor CPT0322010006 CPT0322010006.WholeExome.RP-1303.bam 38552678628 BAM NA ed188548-0bd3-4125-bf7d-80b0cea276a0 16edbf3efaa98faec8eccdb267f4b285 hg19 Primary Tumor C3N-05915.MethArray.Green.A C3N-05915 LSCC Methylation Array tissue_normal CPT0322070006 204372030085_R07C01_Grn.idat 13677880 IDAT Green e496ff1a-24db-4c8e-9f71-b923549cd0f5 4a07c179602ba2534170646570b3948e NA Solid Tissue Normal C3N-05915.MethArray.Green.T C3N-05915 LSCC Methylation Array tumor CPT0322060006 204367490043_R04C01_Grn.idat 13677880 IDAT Green 5287386b-d2a2-42d0-8d2d-6e56e501ae42 98fb28112ccd94441e2ab2a1b550b963 NA Primary Tumor C3N-05915.MethArray.Red.A C3N-05915 LSCC Methylation Array tissue_normal CPT0322070006 204372030085_R07C01_Red.idat 13677880 IDAT Red c0ecf474-f85b-4d20-8c5d-1bfb8f78a032 5dc6110aaf3c487d5d87184a4309c674 NA Solid Tissue Normal C3N-05915.MethArray.Red.T C3N-05915 LSCC Methylation Array tumor CPT0322060006 204367490043_R04C01_Red.idat 13677880 IDAT Red c24c7ed8-0eb0-41fc-b553-283ecf7fe07d 729a5faa242dae3fec9a078b4860c8c3 NA Primary Tumor C3N-05915.miRNA-Seq.A C3N-05915 LSCC miRNA-Seq tissue_normal CPT0322070009 200325_UNC31-K00269_0272_AHHC2NBBXY_CCAACA_S12_L001_R1_001.unaln.bam 228888808 BAM NA b7510650-9f2b-4af7-9f1e-d8088e5d593d 72db9eff9eb18fa8fc6afc5988224574 NA Solid Tissue Normal +C3N-05915.miRNA-Seq.A.hg38 C3N-05915 LSCC miRNA-Seq tissue_normal CPT0322070009 85f8793d-2436-44cc-a6be-cb2f443896b8_mirnaseq_gdc_realn.bam 257121883 BAM NA b61bdd84-a1f5-44b4-b65f-772becd8b2ae 017bc6503f9670661277fe34471c20f7 hg38 Solid Tissue Normal C3N-05915.miRNA-Seq.T C3N-05915 LSCC miRNA-Seq tumor CPT0322060009 200224_UNC31-K00269_0267_AHC722BBXY_GGTAGC_S24_L008_R1_001.unaln.bam 179125540 BAM NA b2f36d14-f9c2-4410-b7d6-15ea391ba8e1 f05f4845dfa1d6c005534ce9a515007a NA Primary Tumor +C3N-05915.miRNA-Seq.T.hg38 C3N-05915 LSCC miRNA-Seq tumor CPT0322060009 9e4e0903-c9f8-4cde-af37-8db1b1be8582_mirnaseq_gdc_realn.bam 197900557 BAM NA c64ae0a9-1bc5-4048-9947-81f73debe2bf 801ff1439af5f64bcc3bb818867f78db hg38 Primary Tumor C3N-05915.RNA-Seq.R1.A C3N-05915 LSCC RNA-Seq tissue_normal CPT0322070009 200428_UNC31-K00269_0275_AHGCJVBBXY_TCATCCTT-AGCGAGCT_S20_L005_R1_001.fastq.gz 4785620358 FASTQ NA 2eb48e82-c9fb-49f0-8b86-8bfc59f07970 7b2906ab1ffb41a17fce3448c8bb540e NA Solid Tissue Normal C3N-05915.RNA-Seq.R1.T C3N-05915 LSCC RNA-Seq tumor CPT0322060009 200428_UNC31-K00269_0276_BHH5TMBBXY_ATGAGGCC-GTTAATTG_S8_L002_R1_001.fastq.gz 3825956607 FASTQ NA 75bdae0c-f147-4087-8fed-495747727c5a be9b707db66e2c34acd26a0b94f61c27 NA Primary Tumor C3N-05915.RNA-Seq.R2.A C3N-05915 LSCC RNA-Seq tissue_normal CPT0322070009 200428_UNC31-K00269_0275_AHGCJVBBXY_TCATCCTT-AGCGAGCT_S20_L005_R2_001.fastq.gz 4970327192 FASTQ NA feb2ffa1-b685-4ffb-a7b7-871bc446a2bb 5cb9adee585c1e71c515c4aa62765d9f NA Solid Tissue Normal C3N-05915.RNA-Seq.R2.T C3N-05915 LSCC RNA-Seq tumor CPT0322060009 200428_UNC31-K00269_0276_BHH5TMBBXY_ATGAGGCC-GTTAATTG_S8_L002_R2_001.fastq.gz 4176622628 FASTQ NA 2275b000-ab63-41d0-9239-28c5b2296c46 36d5d92c9beef9dbba0720a2cef36cdf NA Primary Tumor C3N-05915.WGS.N C3N-05915 LSCC WGS blood_normal CPT0322100002 CPT0322100002.WholeGenome.RP-2158.bam 24168918360 BAM NA 4d992dd8-4561-44c4-9c73-502480f9ddd4 8d11c040902754b63c412a5d2bfb646f hg19 Blood Derived Normal +C3N-05915.WGS.N.hg38 C3N-05915 LSCC WGS blood_normal CPT0322100002 559686d4-6154-46cb-9117-0f8891718a04_wgs_gdc_realn.bam 70275815907 BAM NA e12e825f-4ce5-4a46-8f95-1c68bc93eb39 10f36d55587937a2d9c1bf4f0f9903db hg38 Blood Derived Normal C3N-05915.WGS.T C3N-05915 LSCC WGS tumor CPT0322060006 CPT0322060006.WholeGenome.RP-2158.bam 25921492516 BAM NA 31afeab1-a2f4-461a-9540-a0158665c47d 5d3fa4285d4b39b4b7929281d7a0290e hg19 Primary Tumor +C3N-05915.WGS.T.hg38 C3N-05915 LSCC WGS tumor CPT0322060006 3c742abb-e129-49e8-92cf-6af9ce1804eb_wgs_gdc_realn.bam 75696480525 BAM NA d5ffc59c-b2ae-4689-b4d0-6547a2d77ae3 0863ea98449f65908552fdbe92674481 hg38 Primary Tumor C3N-05915.WXS.A C3N-05915 LSCC WXS tissue_normal CPT0322070006 CPT0322070006.WholeExome.RP-1303.bam 22575022794 BAM NA 0f5b1cba-7268-4789-9272-ece1d44539ef 80aa79192e35476bd8069d4adc71421a hg19 Solid Tissue Normal C3N-05915.WXS.N C3N-05915 LSCC WXS blood_normal CPT0322100002 CPT0322100002.WholeExome.RP-1303.bam 23205120507 BAM NA 72e67ef4-4a2c-4389-911b-cc63a5ad2767 26b2b6b85701e2a2b8343a1612003f5c hg19 Blood Derived Normal +C3N-05915.WXS.T C3N-05915 LSCC WXS tumor CPT0322060006 CPT0322060006.WholeExome.RP-1303.bam 40773877575 BAM NA 6efec94b-63d6-41f1-b6ed-227d61a4847e 801de8a7014d3dc15f0385e10f168d84 hg19 Primary Tumor C3N-05923.MethArray.Green.A C3N-05923 LSCC Methylation Array tissue_normal CPT0322390006 204367490084_R07C01_Grn.idat 13677890 IDAT Green 956ee02e-a209-466f-b9dc-fba625fd1e5f 483fc33fc8ae0908c19b35f3ab72d006 NA Solid Tissue Normal C3N-05923.MethArray.Green.T C3N-05923 LSCC Methylation Array tumor CPT0322380006 204367400148_R01C01_Grn.idat 13677880 IDAT Green de90dddf-3cec-4c35-a334-4fc28caba173 3d0d263cbd0abbd6fa80401085e7dc59 NA Primary Tumor C3N-05923.MethArray.Red.A C3N-05923 LSCC Methylation Array tissue_normal CPT0322390006 204367490084_R07C01_Red.idat 13677890 IDAT Red c31849cd-29c0-4ff0-85fb-e351e35ef81e 151c751b0332006d6e1519482da577fa NA Solid Tissue Normal C3N-05923.MethArray.Red.T C3N-05923 LSCC Methylation Array tumor CPT0322380006 204367400148_R01C01_Red.idat 13677880 IDAT Red f4b892f3-cc6e-492d-b6b5-7441308e5562 f044ead12d78d2d20bdcff5f7f66273f NA Primary Tumor C3N-05923.miRNA-Seq.A C3N-05923 LSCC miRNA-Seq tissue_normal CPT0322390009 200325_UNC31-K00269_0272_AHHC2NBBXY_CGGAAT_S13_L001_R1_001.unaln.bam 313226873 BAM NA 6b1e3b20-36a1-4122-89b7-d2ea311c7aeb 269a1dd375bfd593ad90f4d4c023c2e4 NA Solid Tissue Normal +C3N-05923.miRNA-Seq.A.hg38 C3N-05923 LSCC miRNA-Seq tissue_normal CPT0322390009 a9fbb10b-f3c0-4b09-a69f-b0d801a91b67_mirnaseq_gdc_realn.bam 347724053 BAM NA bf3183e3-2933-4d85-a6dd-220e06371af4 02a3a6695886e0087e7b4c913e2cf787 hg38 Solid Tissue Normal C3N-05923.miRNA-Seq.T C3N-05923 LSCC miRNA-Seq tumor CPT0322380009 200224_UNC31-K00269_0267_AHC722BBXY_ACTGAT_S25_L007_R1_001.unaln.bam 224888474 BAM NA e17c359f-1ae2-4368-af53-bda0db877ae1 4e74529e85d26ea997bcbbe640a4fa04 NA Primary Tumor +C3N-05923.miRNA-Seq.T.hg38 C3N-05923 LSCC miRNA-Seq tumor CPT0322380009 dcb10878-d254-428e-8de9-ad94d6729a25_mirnaseq_gdc_realn.bam 246121106 BAM NA ba455b79-338d-4da7-944d-81f1f6482a9e c43594c34e5780d2915e010f42d4117c hg38 Primary Tumor C3N-05923.RNA-Seq.R1.A C3N-05923 LSCC RNA-Seq tissue_normal CPT0322390009 200428_UNC31-K00269_0275_AHGCJVBBXY_AGGTTATA-CAGTTCCG_S21_L006_R1_001.fastq.gz 3354127044 FASTQ NA ee71d79c-d2b9-465c-9991-f983ec6ddb35 356bf90bcb8667fc649d6e3ca034623e NA Solid Tissue Normal C3N-05923.RNA-Seq.R1.T C3N-05923 LSCC RNA-Seq tumor CPT0322380009 200428_UNC31-K00269_0276_BHH5TMBBXY_ACTAAGAT-AACCGCGG_S9_L003_R1_001.fastq.gz 4494548642 FASTQ NA 90004f61-49e4-496c-9a0b-f1bdf504c25f 30629344159280d005291b178b60764a NA Primary Tumor C3N-05923.RNA-Seq.R2.A C3N-05923 LSCC RNA-Seq tissue_normal CPT0322390009 200428_UNC31-K00269_0275_AHGCJVBBXY_AGGTTATA-CAGTTCCG_S21_L006_R2_001.fastq.gz 3498431789 FASTQ NA cce57f46-dee9-4d01-a95b-c25c7a52247c 2cb1a56bf88b16e827b08035d3cbe35a NA Solid Tissue Normal @@ -31817,7 +32457,9 @@ C3N-05929.MethArray.Green.T C3N-05929 LSCC Methylation Array tumor CPT0322530006 C3N-05929.MethArray.Red.A C3N-05929 LSCC Methylation Array tissue_normal CPT0322540006 204367470157_R08C01_Red.idat 13677880 IDAT Red 5323923c-786e-4dea-be03-333bce28e69b 03ffdef1308e31a9744f00bf4df5abae NA Solid Tissue Normal C3N-05929.MethArray.Red.T C3N-05929 LSCC Methylation Array tumor CPT0322530006 204372030161_R08C01_Red.idat 13677880 IDAT Red 78e2f9c6-7c9c-47d7-ae3f-89d100775d9d b69e44302fd0d3ba81fd286d4e874c71 NA Primary Tumor C3N-05929.miRNA-Seq.A C3N-05929 LSCC miRNA-Seq tissue_normal CPT0322540009 200325_UNC31-K00269_0272_AHHC2NBBXY_CTAGCT_S14_L001_R1_001.unaln.bam 255308167 BAM NA a294d284-e383-47fd-81ae-d5b4ee89dd49 b47f993f240325c6d78a035537e05f94 NA Solid Tissue Normal +C3N-05929.miRNA-Seq.A.hg38 C3N-05929 LSCC miRNA-Seq tissue_normal CPT0322540009 0cc8fee9-3beb-49c3-bc66-9a1684575608_mirnaseq_gdc_realn.bam 280114513 BAM NA 863c69ce-0329-4b1b-92a3-cd5980b4a794 0f6fb699100c3608b9f196ae4bb3fc90 hg38 Solid Tissue Normal C3N-05929.miRNA-Seq.T C3N-05929 LSCC miRNA-Seq tumor CPT0322530009 200224_UNC31-K00269_0267_AHC722BBXY_ATGAGC_S26_L007_R1_001.unaln.bam 193939181 BAM NA a54ddf21-1e74-46d0-b623-0442f8a0ec8e c26f3fdb12b7bf7cdb00e22f555290b9 NA Primary Tumor +C3N-05929.miRNA-Seq.T.hg38 C3N-05929 LSCC miRNA-Seq tumor CPT0322530009 4670cbb0-ebc9-4f28-a779-68fdb88be0b8_mirnaseq_gdc_realn.bam 218315510 BAM NA c86d52ea-94a8-41b1-96a0-54edd2804dc7 6a005a756dcf208c5b583103449a91d3 hg38 Primary Tumor C3N-05929.RNA-Seq.R1.A C3N-05929 LSCC RNA-Seq tissue_normal CPT0322540009 200428_UNC31-K00269_0275_AHGCJVBBXY_GAACCGCG-TGACCTTA_S22_L006_R1_001.fastq.gz 4806108331 FASTQ NA 9cbe6635-995a-411f-883c-d8bcfaed58d2 6cca2a8f4caebb22319876f09fa0bd44 NA Solid Tissue Normal C3N-05929.RNA-Seq.R1.T C3N-05929 LSCC RNA-Seq tumor CPT0322530009 200428_UNC31-K00269_0276_BHH5TMBBXY_GTCGGAGC-GGTTATAA_S10_L003_R1_001.fastq.gz 3571465475 FASTQ NA d22afb8c-5cf5-4e98-b58b-39798d2cbae3 11d4edad3bcee1bd7b2361240a66b8c9 NA Primary Tumor C3N-05929.RNA-Seq.R2.A C3N-05929 LSCC RNA-Seq tissue_normal CPT0322540009 200428_UNC31-K00269_0275_AHGCJVBBXY_GAACCGCG-TGACCTTA_S22_L006_R2_001.fastq.gz 5032367135 FASTQ NA 374007a8-1849-4b79-be60-5bd503d26be3 5faeb707c72344111832a35e080aa426 NA Solid Tissue Normal diff --git a/CPTAC3.Demographics.dat b/CPTAC3.Demographics.dat index a097ccd..0ca5a98 100644 --- a/CPTAC3.Demographics.dat +++ b/CPTAC3.Demographics.dat @@ -521,9 +521,7 @@ C3L-03493 AML not reported male not reported -23923 C3L-03496 AML not reported female not reported -27693 C3L-03497 AML not reported male not reported -21911 C3L-03547 GBM not reported female not reported -6614 -C3L-03554 GBM not reported male not reported -25755 C3L-03557 GBM not reported female not reported -21273 -C3L-03559 GBM not reported female not reported -19613 C3L-03588 GBM not reported male not reported -20635 C3L-03589 UCEC not hispanic or latino female white -21871 C3L-03624 PDA not reported female not reported -25430 @@ -623,11 +621,9 @@ C3L-04792 LSCC not reported male not reported -27365 C3L-04795 GBM not reported male not reported -13503 C3L-04804 LSCC not reported male not reported -27687 C3L-04808 LSCC not reported female not reported -22907 -C3L-04815 GBM not reported female not reported null C3L-04817 GBM not reported female not reported -19401 C3L-04819 GBM not reported male not reported -21001 C3L-04838 GBM not reported female not reported -7050 -C3L-04843 GBM not reported male not reported null C3L-04844 HNSCC not reported female not reported -22269 C3L-04848 PDA not reported female not reported -26284 C3L-04849 HNSCC not reported male not reported -23099