diff --git a/CPTAC3.Catalog.Summary.dat b/CPTAC3.Catalog.Summary.dat index 6dfcf53..d077839 100644 --- a/CPTAC3.Catalog.Summary.dat +++ b/CPTAC3.Catalog.Summary.dat @@ -3,31 +3,31 @@ 11LU022 LUAD WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT 11LU035 LUAD WGS.hg19 TT N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 T N WXS.hg38 T N RNA.hg38 TTT miRNA.hg38 T MethArray TT C1230738 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C1245129 GBM WGS.hg19 TT N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C204057 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C207624 GBM WGS.hg19 N WXS.hg19 TT N RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C1245129 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C204057 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C207624 GBM WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C208854 GBM WGS.hg19 TTT N WXS.hg19 TTT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C217710 GBM WGS.hg19 WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C217710 GBM WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C219555 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C223491 GBM WGS.hg19 WXS.hg19 N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C224106 GBM WGS.hg19 TT N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C224967 GBM WGS.hg19 WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C223491 GBM WGS.hg19 T WXS.hg19 N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C224106 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C224967 GBM WGS.hg19 T WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C229764 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C231855 GBM WGS.hg19 WXS.hg19 TT N RNA.fq TT miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C234192 GBM WGS.hg19 T WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C231855 GBM WGS.hg19 T WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C234192 GBM WGS.hg19 T WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C2415597 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C243048 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C243909 GBM WGS.hg19 T WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C247230 GBM WGS.hg19 WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C259161 GBM WGS.hg19 TT N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C243909 GBM WGS.hg19 TT WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C247230 GBM WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C259161 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C266664 GBM WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C283515 GBM WGS.hg19 N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C283515 GBM WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C287328 GBM WGS.hg19 T WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C289419 GBM WGS.hg19 TT N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C298152 GBM WGS.hg19 TT N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C289419 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C298152 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C317832 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C330255 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C383391 GBM WGS.hg19 WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C383391 GBM WGS.hg19 T WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C3L-00000 GBM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3L-00001 LUAD WGS.hg19 T N A WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 T N A WXS.hg38 T N A RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3L-00002 UCEC WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -4281,7 +4281,7 @@ C3N-05081 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-05082 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05083 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05084 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C3N-05085 LSCC WGS.hg19 N WXS.hg19 N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA +C3N-05085 LSCC WGS.hg19 T N WXS.hg19 T N A RNA.fq TT AA miRNA.fq T A WGS.hg38 WXS.hg38 RNA.hg38 TTT AAA miRNA.hg38 T A MethArray TT AA C3N-05086 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05087 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-05088 CM WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray @@ -4396,14 +4396,14 @@ C3N-11111 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq C3N-22222 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-33333 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray C3N-44444 TBD WGS.hg19 WXS.hg19 RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C464694 GBM WGS.hg19 WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C464694 GBM WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C524103 GBM WGS.hg19 T N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C621273 GBM WGS.hg19 WXS.hg19 N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray -C685110 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C760878 GBM WGS.hg19 T WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C621273 GBM WGS.hg19 N WXS.hg19 T N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray +C685110 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C760878 GBM WGS.hg19 TT WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT C761370 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C827913 GBM WGS.hg19 T N WXS.hg19 N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT -C846363 GBM WGS.hg19 TT N WXS.hg19 T N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C827913 GBM WGS.hg19 T N WXS.hg19 T N RNA.fq miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT +C846363 GBM WGS.hg19 TT N WXS.hg19 TT N RNA.fq TT miRNA.fq T WGS.hg38 WXS.hg38 RNA.hg38 miRNA.hg38 MethArray TT GTEX-NPJ7-0011-R10A-SM-HAKXW GBM WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq A WGS.hg38 WXS.hg38 RNA.hg38 AAA miRNA.hg38 A MethArray GTEX-P44H-0011-R10A-SM-HAKXX GBM WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq A WGS.hg38 WXS.hg38 RNA.hg38 AAA miRNA.hg38 A MethArray PT-Q2AG GBM WGS.hg19 WXS.hg19 RNA.fq AA miRNA.fq WGS.hg38 WXS.hg38 RNA.hg38 AAA miRNA.hg38 MethArray diff --git a/CPTAC3.Catalog.dat b/CPTAC3.Catalog.dat index 6cfeb2a..fd3415a 100644 --- a/CPTAC3.Catalog.dat +++ b/CPTAC3.Catalog.dat @@ -98,7 +98,9 @@ C1245129.WGS.R.ADNA_bede5e24 C1245129 GBM WGS recurrent_tumor 7316UP-3639 7316UP C1245129.WGS.T.ADNA_f4f0a623 C1245129 GBM WGS tumor 7316UP-2923 7316UP-2923.WholeGenome.RP-2158.bam 68310898527 BAM NA 9ea042b4-5220-487e-90c0-8b5fb62d514f a6c72432b14b5314b02d5c8c954c0d41 hg19 Primary Tumor SM-JU33A sample_tag=ADNA_f4f0a623 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C1245129.WGS.T C1245129 GBM WGS tumor 7316UP-2923-1105251 7316UP-2923-1105251.WholeGenome.RP-2158.bam 62969913054 BAM NA ff7d7322-8f44-4cca-a899-bc04dbf62e37 1db7d752ce00873db0601bf84c662060 hg19 Primary Tumor 1105251 C1245129.WXS.N C1245129 GBM WXS blood_normal 7316UP-2923-1105282 7316UP-2923-1105282.WholeExome.RP-1303.bam 27679924367 BAM NA 334eab09-2429-4ae9-9af9-293d49f76501 7d7a86c6c917c358db9576262890de67 hg19 Blood Derived Normal 1105282 +C1245129.WXS.R.ADNA_bede5e24 C1245129 GBM WXS recurrent_tumor 7316UP-3639 7316UP-3639.WholeExome.RP-1303.bam 33535885886 BAM NA 67022a09-c8a0-42f2-8a24-975f86875723 e5d125c5c765b8003ae640b7bd930b11 hg19 Recurrent Tumor SM-JU33M sample_tag=ADNA_bede5e24 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C1245129.WXS.R C1245129 GBM WXS recurrent_tumor 7316UP-3639-1105256 7316UP-3639-1105256.WholeExome.RP-1303.bam 27204369067 BAM NA acb1e32e-2c88-4584-b71a-846497512ffd 2b0d84e73cb5774aff2cc45ab1a53135 hg19 Recurrent Tumor 1105256 +C1245129.WXS.T.ADNA_f4f0a623 C1245129 GBM WXS tumor 7316UP-2923 7316UP-2923.WholeExome.RP-1303.bam 27658601868 BAM NA 758f7bab-339d-4faa-882d-9bde7a947266 04368db0063df5781c5c208155946f11 hg19 Primary Tumor SM-JU33A sample_tag=ADNA_f4f0a623 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C1245129.WXS.T C1245129 GBM WXS tumor 7316UP-2923-1105251 7316UP-2923-1105251.WholeExome.RP-1303.bam 28736155132 BAM NA da97bd44-e486-4792-a8ec-76f714fdda25 c4588eb5fefc18bc280d869ae76ccf96 hg19 Primary Tumor 1105251 C204057.MethArray.Green.R.ADNA_abe8b610 C204057 GBM Methylation Array recurrent_tumor 7316UP-662 205555380040_R02C01_Grn.idat 13677900 IDAT Green b8cabc20-fe7d-49bc-8f84-8cf4b686eadb 071e228dcf30aa7e5e017e8518d906d7 NA Recurrent Tumor SM-JU34B sample_tag=ADNA_abe8b610 Duplicate Item: CHOP GBM Triplicate Recurrent Tumor DNA Aliquot C204057.MethArray.Green.T.ADNA_fb79d37d C204057 GBM Methylation Array tumor 7316UP-302 205854150169_R07C01_Grn.idat 13677900 IDAT Green 9f1ca366-1265-475f-97c9-48b62502632d 946ffa94c50b57644f39a44d81ac8398 NA Primary Tumor SM-JU33Y sample_tag=ADNA_fb79d37d Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot @@ -112,16 +114,21 @@ C204057.RNA-Seq.R2.R.ARNA_4a62de3d C204057 GBM RNA-Seq recurrent_tumor 7316UP-66 C204057.RNA-Seq.R2.T C204057 GBM RNA-Seq tumor 7316UP-302-1104767 210713_UNC32-K00270_0291_AHLK5VBBXY_GGACTTGG-CGCAGACG_S31_L008_R2_001.fastq.gz 3876277963 FASTQ NA 8e892ebf-f748-4b16-b9fb-bad025c61d0b 3d8aa0695e65046ba351a65e72285d8b NA Primary Tumor 1104767 C204057.WGS.N C204057 GBM WGS blood_normal 7316UP-302-1105284 7316UP-302-1105284.WholeGenome.RP-2158.bam 51382775991 BAM NA 4fcea472-64ed-4e2a-ad0b-832dd6fba527 8a2cd1f84171daff22db4280eb748a97 hg19 Blood Derived Normal 1105284 C204057.WGS.R.ADNA_0970ef0d C204057 GBM WGS recurrent_tumor 7316UP-662-1105237 7316UP-662-1105237.WholeGenome.RP-2158.bam 50399269668 BAM NA 79cfad83-3cab-4f9a-9d9d-df2bc48e331f 229958594d27f7254f9dec482a2d7e4d hg19 Recurrent Tumor 1105237 sample_tag=ADNA_0970ef0d Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot +C204057.WGS.R.ADNA_abe8b610 C204057 GBM WGS recurrent_tumor 7316UP-662 7316UP-662.WholeGenome.RP-2158.bam 53133400430 BAM NA e6e7d712-5903-433f-8773-05a95164edd4 089467a5cca96d4323fa8041906f002f hg19 Recurrent Tumor SM-JU34B sample_tag=ADNA_abe8b610 Duplicate Item: CHOP GBM Triplicate Recurrent Tumor DNA Aliquot +C204057.WGS.T.ADNA_fb79d37d C204057 GBM WGS tumor 7316UP-302 7316UP-302.WholeGenome.RP-2158.bam 63043564130 BAM NA 1a331d7c-1fdf-465a-8e6f-f0ea3e83c361 9f81c4d8a556b7dd7651381184fa2798 hg19 Primary Tumor SM-JU33Y sample_tag=ADNA_fb79d37d Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C204057.WGS.T C204057 GBM WGS tumor 7316UP-302-1105230 7316UP-302-1105230.WholeGenome.RP-2158.bam 49458426510 BAM NA d4819119-dcc7-45f5-8c8e-70624744ed84 5d733d33aaea6ad5b973cc65e66a45ce hg19 Primary Tumor 1105230 C204057.WXS.N C204057 GBM WXS blood_normal 7316UP-302-1105284 7316UP-302-1105284.WholeExome.RP-1303.bam 23573196077 BAM NA 8564b3ee-d4dc-4ba1-9752-4ecd0fdb35af df125056956ed2568efd200039ac6237 hg19 Blood Derived Normal 1105284 C204057.WXS.R.ADNA_0970ef0d C204057 GBM WXS recurrent_tumor 7316UP-662-1105237 7316UP-662-1105237.WholeExome.RP-1303.bam 22253872234 BAM NA ba464092-6b3e-4c16-9ae5-b57c4cd4b9db b751f66d8a0940dc4aa1ff12a0a05616 hg19 Recurrent Tumor 1105237 sample_tag=ADNA_0970ef0d Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot +C204057.WXS.R.ADNA_abe8b610 C204057 GBM WXS recurrent_tumor 7316UP-662 7316UP-662.WholeExome.RP-1303.bam 13295977421 BAM NA 940f4454-bee3-47bd-ae39-72c2b13c0ca8 19ee3e35dcca8e5720463f0e508fcae7 hg19 Recurrent Tumor SM-JU34B sample_tag=ADNA_abe8b610 Duplicate Item: CHOP GBM Triplicate Recurrent Tumor DNA Aliquot C204057.WXS.R C204057 GBM WXS recurrent_tumor 7316UP-662-1105227 7316UP-662-1105227.WholeExome.RP-1303.bam 27949418001 BAM NA 79856ba8-1268-4a1f-b2c6-728e2191df5f 71cca779179fc942f22a0d4a871bd001 hg19 Recurrent Tumor 1105227 +C204057.WXS.T.ADNA_fb79d37d C204057 GBM WXS tumor 7316UP-302 7316UP-302.WholeExome.RP-1303.bam 26620556360 BAM NA fcdbdf5e-1e17-41ad-a0a0-1e91613c2e20 5b55167488303a570a6fe332955414ee hg19 Primary Tumor SM-JU33Y sample_tag=ADNA_fb79d37d Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C204057.WXS.T C204057 GBM WXS tumor 7316UP-302-1105230 7316UP-302-1105230.WholeExome.RP-1303.bam 21477886080 BAM NA c42d58e9-87d7-434d-86d9-a8365d4d6f91 81d2e1d633bfe9d2321f7861e5e4d48f hg19 Primary Tumor 1105230 C207624.MethArray.Green.R.ADNA_39bda097 C207624 GBM Methylation Array recurrent_tumor 7316UP-961 205705530002_R01C01_Grn.idat 13677900 IDAT Green 55a73a6f-675b-45e4-8c6d-8d001ef6dcf7 38556dc7fa206d58684e1f6213c05659 NA Recurrent Tumor SM-JU34Z sample_tag=ADNA_39bda097 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C207624.MethArray.Green.T.ADNA_8ab52100 C207624 GBM Methylation Array tumor 7316UP-603 205707890115_R02C01_Grn.idat 13677900 IDAT Green c1ce334d-2013-4766-bd07-27c9185511b9 bbad0355210ece1fe5696263ebf42038 NA Primary Tumor SM-JU34N sample_tag=ADNA_8ab52100 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C207624.MethArray.Red.R.ADNA_39bda097 C207624 GBM Methylation Array recurrent_tumor 7316UP-961 205705530002_R01C01_Red.idat 13677900 IDAT Red 62e0eeb7-8d76-43c5-8383-c29d50644825 7fa0ebd2c193192003cb9af7b4c55f95 NA Recurrent Tumor SM-JU34Z sample_tag=ADNA_39bda097 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C207624.MethArray.Red.T.ADNA_8ab52100 C207624 GBM Methylation Array tumor 7316UP-603 205707890115_R02C01_Red.idat 13677900 IDAT Red 608cb82b-4b05-44d7-b633-39965a9b2f9e 65669e8deaa5dd2247df0914fcf55467 NA Primary Tumor SM-JU34N sample_tag=ADNA_8ab52100 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C207624.miRNA-Seq.R C207624 GBM miRNA-Seq recurrent_tumor 7316UP-961-1104765 210817_UNC31-K00269_0302_AHLCTHBBXY_ATGAGC_S1_L001_R1_001.unaln.bam 304375832 BAM NA d0e95499-39a8-4dd2-826d-ae5806ddeb02 3709435a958c3b08e12f848edfc4c50f NA Recurrent Tumor 1104765 +C207624.miRNA-Seq.T C207624 GBM miRNA-Seq tumor 7316UP-603-1104773 220125_UNC32-K00270_0311_AHMNYYBBXY_CCAACA_S8_L002_R1_001.unaln.bam 210809739 BAM NA b164fd3d-fae8-41e6-8616-7751408cef41 0194a737c2b426c6dc998aae583fe7a5 NA Primary Tumor 1104773 C207624.RNA-Seq.R1.R C207624 GBM RNA-Seq recurrent_tumor 7316UP-961-1104765 210713_UNC32-K00270_0291_AHLK5VBBXY_CTTGGTAT-CCAAGTCC_S7_L002_R1_001.fastq.gz 3805401120 FASTQ NA 3f6a1a61-d46d-4ec0-9635-1501d10f1e92 c440a9bc1ce5b24d6eef6b8108d63c77 NA Recurrent Tumor 1104765 C207624.RNA-Seq.R1.T C207624 GBM RNA-Seq tumor 7316UP-603-1104773 210811_UNC31-K00269_0301_AHLLC5BBXY_TTGCCTAG-ACCACTTA_S24_L006_R1_001.fastq.gz 4159870756 FASTQ NA 851d1582-47e3-4694-a4ce-54b4f0ca7865 11fce1b39c68ad5a90fe8c12b6dbb44f NA Primary Tumor 1104773 C207624.RNA-Seq.R2.R C207624 GBM RNA-Seq recurrent_tumor 7316UP-961-1104765 210713_UNC32-K00270_0291_AHLK5VBBXY_CTTGGTAT-CCAAGTCC_S7_L002_R2_001.fastq.gz 4104689026 FASTQ NA 2b27d4e4-a94c-47e7-92d3-f317938b113c 1c0e87382af67ba51c6fb226195f4a86 NA Recurrent Tumor 1104765 @@ -129,6 +136,7 @@ C207624.RNA-Seq.R2.T C207624 GBM RNA-Seq tumor 7316UP-603-1104773 210811_UNC31-K C207624.WGS.N C207624 GBM WGS blood_normal 7316UP-603-1105207 7316UP-603-1105207.WholeGenome.RP-2158.bam 48365906283 BAM NA 5d553f09-86f8-4815-8cea-4173bcf82b4d 597298ebb33213e2bc64e8e294c03d3f hg19 Blood Derived Normal 1105207 C207624.WGS.R.ADNA_39bda097 C207624 GBM WGS recurrent_tumor 7316UP-961 7316UP-961.WholeGenome.RP-2158.bam 48539159794 BAM NA daec3268-ea08-44c8-856f-f42bff316c6b f6638cdd41f767130800eedcb7e57caf hg19 Recurrent Tumor SM-JU34Z sample_tag=ADNA_39bda097 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C207624.WGS.R C207624 GBM WGS recurrent_tumor 7316UP-961-1105228 7316UP-961-1105228.WholeGenome.RP-2158.bam 51892018820 BAM NA 86a56d79-40ac-47fe-8c62-7f854fa6fc68 22210c926a27db709a47b8da5c5df378 hg19 Recurrent Tumor 1105228 +C207624.WGS.T.ADNA_8ab52100 C207624 GBM WGS tumor 7316UP-603 7316UP-603.WholeGenome.RP-2158.bam 44572387735 BAM NA 6672f7c2-cdfc-4b49-a4a2-7c6268af8e3f 10674ff683bc6dd56de7f7763652142b hg19 Primary Tumor SM-JU34N sample_tag=ADNA_8ab52100 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C207624.WXS.N C207624 GBM WXS blood_normal 7316UP-603-1105207 7316UP-603-1105207.WholeExome.RP-1303.bam 22981380825 BAM NA f5130800-4b65-43c8-a053-2b6e914c590b cb00ec231ffaa2f0905a240437480173 hg19 Blood Derived Normal 1105207 C207624.WXS.R.ADNA_39bda097 C207624 GBM WXS recurrent_tumor 7316UP-961 7316UP-961.WholeExome.RP-1303.bam 31458355354 BAM NA 82200a05-7175-45ac-b33a-023baec9c206 8d4741c4c8279ecd037b63d68ada06ee hg19 Recurrent Tumor SM-JU34Z sample_tag=ADNA_39bda097 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C207624.WXS.R C207624 GBM WXS recurrent_tumor 7316UP-961-1105228 7316UP-961-1105228.WholeExome.RP-1303.bam 26058311240 BAM NA 8845f830-2f50-42de-94fb-2f0a30ab221e 6f20b9db6058f7910af131aa19da6310 hg19 Recurrent Tumor 1105228 @@ -160,13 +168,18 @@ C217710.MethArray.Red.T.ADNA_e91fb26d C217710 GBM Methylation Array tumor 7316UP C217710.miRNA-Seq.T C217710 GBM miRNA-Seq tumor 7316UP-19-1104782 210817_UNC31-K00269_0302_AHLCTHBBXY_TACAGC_S34_L002_R1_001.unaln.bam 345645442 BAM NA 2790ed60-cbc8-45e5-9163-ef8019d37857 f1bd90e904143056332314d26e16da55 NA Primary Tumor 1104782 C217710.RNA-Seq.R1.T C217710 GBM RNA-Seq tumor 7316UP-19-1104782 210713_UNC32-K00270_0291_AHLK5VBBXY_TAATACAG-ATATTCAC_S16_L004_R1_001.fastq.gz 3640299302 FASTQ NA 4b6817fd-a951-4eb0-bdac-687b93cf4b88 504b6c07619eca6f9337027810fa773f NA Primary Tumor 1104782 C217710.RNA-Seq.R2.T C217710 GBM RNA-Seq tumor 7316UP-19-1104782 210713_UNC32-K00270_0291_AHLK5VBBXY_TAATACAG-ATATTCAC_S16_L004_R2_001.fastq.gz 3908136926 FASTQ NA 4650c90e-4e22-48a5-942f-48a9cd2b854d 7b1e22caaeebf8d40e741a37c00f7fa1 NA Primary Tumor 1104782 +C217710.WGS.N C217710 GBM WGS blood_normal 7316UP-1534-1105276 7316UP-1534-1105276.WholeGenome.RP-2158.bam 42699047182 BAM NA 3b672292-d46c-47d9-8a16-820be2a1df27 0904f3af943819db329520fd69fbd768 hg19 Blood Derived Normal 1105276 +C217710.WGS.R C217710 GBM WGS recurrent_tumor 7316UP-1534 7316UP-1534.WholeGenome.RP-2158.bam 52402219420 BAM NA 646c8302-ec6c-4ae5-a4d6-f52e2ca0d427 7fcdbcb20ae688519a12ecc36571ebef hg19 Recurrent Tumor SM-JU33B +C217710.WGS.T.ADNA_e91fb26d C217710 GBM WGS tumor 7316UP-19 7316UP-19.WholeGenome.RP-2158.bam 52811565719 BAM NA 63c71c95-7bf7-46cc-b049-5163af8dc1c6 ce37eebc60678844629443a0bde61899 hg19 Primary Tumor SM-JU33N sample_tag=ADNA_e91fb26d Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C217710.WXS.N C217710 GBM WXS blood_normal 7316UP-1534-1105276 7316UP-1534-1105276.WholeExome.RP-1303.bam 28868330979 BAM NA 4dd64fa5-6f9b-4fd5-90d7-d035a8671553 5675c85b2f625af9769b02a848ac62af hg19 Blood Derived Normal 1105276 +C217710.WXS.R C217710 GBM WXS recurrent_tumor 7316UP-1534 7316UP-1534.WholeExome.RP-1303.bam 25203950308 BAM NA 566329d7-f198-4924-bf01-6cdd00d692a8 08e4d0b6e868277ba65d5c289c1f1fa6 hg19 Recurrent Tumor SM-JU33B C217710.WXS.T.ADNA_e91fb26d C217710 GBM WXS tumor 7316UP-19 7316UP-19.WholeExome.RP-1303.bam 43873823632 BAM NA 870d14bf-8aaf-494a-81fe-947dfa11787d 9d057509664a0689ef71657720d6ad12 hg19 Primary Tumor SM-JU33N sample_tag=ADNA_e91fb26d Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C217710.WXS.T C217710 GBM WXS tumor 7316UP-19-1105245 7316UP-19-1105245.WholeExome.RP-1303.bam 22589791817 BAM NA 87b51d25-9339-49ab-920f-ab8cecd367e5 ab4ce8b229b7648690e1887995435e07 hg19 Primary Tumor 1105245 C219555.MethArray.Green.R.ADNA_3937258b C219555 GBM Methylation Array recurrent_tumor 7316UP-334 205707890073_R02C01_Grn.idat 13677900 IDAT Green 8bc6c249-f73a-4625-8894-11c9596a944b 7dadbfb438a60b2b40584a2082214f59 NA Recurrent Tumor SM-JU33Z sample_tag=ADNA_3937258b Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C219555.MethArray.Green.T.ADNA_d29f9cc4 C219555 GBM Methylation Array tumor 7316UP-35 205854140144_R01C01_Grn.idat 13677900 IDAT Green 0098bf4f-cf5e-40ea-a6e2-6fa1a85ab19b 5d3b53e33ad753c495fdd175ee0d3e94 NA Primary Tumor SM-JU34C sample_tag=ADNA_d29f9cc4 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C219555.MethArray.Red.R.ADNA_3937258b C219555 GBM Methylation Array recurrent_tumor 7316UP-334 205707890073_R02C01_Red.idat 13677900 IDAT Red dd59ad96-eb19-422d-8076-b92099136c03 ad6ee965047fccdd0ce3950d68b50274 NA Recurrent Tumor SM-JU33Z sample_tag=ADNA_3937258b Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C219555.MethArray.Red.T.ADNA_d29f9cc4 C219555 GBM Methylation Array tumor 7316UP-35 205854140144_R01C01_Red.idat 13677900 IDAT Red a8b205bd-6ad7-40b0-8fb0-66bbe3041542 96cf5276b64dde5168bbf68a660b4141 NA Primary Tumor SM-JU34C sample_tag=ADNA_d29f9cc4 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot +C219555.miRNA-Seq.R C219555 GBM miRNA-Seq recurrent_tumor 7316UP-334-1104785 220125_UNC32-K00270_0311_AHMNYYBBXY_CTATAC_S12_L002_R1_001.unaln.bam 231707571 BAM NA edce9c26-b973-45a8-bf27-2ff3e76b3bd8 b2a68eae9357e9dfdb8c738d300137fe NA Recurrent Tumor 1104785 C219555.RNA-Seq.R1.R C219555 GBM RNA-Seq recurrent_tumor 7316UP-334-1104785 210811_UNC31-K00269_0301_AHLLC5BBXY_TAAGGTCA-TGTCGTAG_S23_L006_R1_001.fastq.gz 4651016359 FASTQ NA ddde0a66-c5c5-4aa0-8021-f4c5039e1adf c51ff4e283343f5e95d6e196be14f6e2 NA Recurrent Tumor 1104785 C219555.RNA-Seq.R2.R C219555 GBM RNA-Seq recurrent_tumor 7316UP-334-1104785 210811_UNC31-K00269_0301_AHLLC5BBXY_TAAGGTCA-TGTCGTAG_S23_L006_R2_001.fastq.gz 5060489472 FASTQ NA 1871abee-0aa8-4766-b001-d9c3b0c8ff27 ce12fe866e58d02be49343030d28825e NA Recurrent Tumor 1104785 C219555.WGS.N C219555 GBM WGS blood_normal 7316UP-334-1105285 7316UP-334-1105285.WholeGenome.RP-2158.bam 68621543980 BAM NA 8ab71475-b793-47d1-b19b-ed65b1ddd041 3c5c94a59bd9e5fd10c4de71fde732af hg19 Blood Derived Normal 1105285 @@ -182,8 +195,11 @@ C223491.MethArray.Red.R.ADNA_41e87f66 C223491 GBM Methylation Array recurrent_tu C223491.miRNA-Seq.R C223491 GBM miRNA-Seq recurrent_tumor 7316UP-483-1104812 210817_UNC31-K00269_0302_AHLCTHBBXY_ACTGAT_S43_L003_R1_001.unaln.bam 361925118 BAM NA eaef7f8f-75b6-4467-b88e-0e5422639d63 081c88f5d0f73a5611bfa0d07d85c323 NA Recurrent Tumor 1104812 C223491.RNA-Seq.R1.R C223491 GBM RNA-Seq recurrent_tumor 7316UP-483-1104812 210713_UNC32-K00270_0291_AHLK5VBBXY_TGGATCGA-GTGCGATA_S19_L005_R1_001.fastq.gz 4037245471 FASTQ NA 1c436956-9492-4126-8ed6-160d0909e49e 9ffa94c73af728fd8eb0ebd074099352 NA Recurrent Tumor 1104812 C223491.RNA-Seq.R2.R C223491 GBM RNA-Seq recurrent_tumor 7316UP-483-1104812 210713_UNC32-K00270_0291_AHLK5VBBXY_TGGATCGA-GTGCGATA_S19_L005_R2_001.fastq.gz 4283501940 FASTQ NA a46bf346-0896-46e7-a3c2-ca63e1e137a0 bfa5879e591fba0a64a7405513531247 NA Recurrent Tumor 1104812 +C223491.WGS.R.ADNA_41e87f66 C223491 GBM WGS recurrent_tumor 7316UP-483 7316UP-483.WholeGenome.RP-2158.bam 48571709354 BAM NA b737472a-27fd-4458-81e1-b6951939289b 76c548d4af0f2e32f325ada5f4d79d88 hg19 Recurrent Tumor SM-JU34O sample_tag=ADNA_41e87f66 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C223491.WGS.R C223491 GBM WGS recurrent_tumor 7316UP-483-1105191 7316UP-483-1105191.WholeGenome.RP-2158.bam 52692734505 BAM NA 7fc1bd1b-2147-44ed-91d9-cf53b966f700 8841250ca3857d6c82ddd15f240e9209 hg19 Recurrent Tumor 1105191 +C223491.WGS.T C223491 GBM WGS tumor 7316UP-99 7316UP-99.WholeGenome.RP-2158.bam 49865930928 BAM NA cf5efe80-b78b-452d-8f15-b60678ac0fa8 f6ed1c9218fbcd62dae4e622cf245062 hg19 Primary Tumor SM-JU351 C223491.WXS.N C223491 GBM WXS blood_normal 7316UP-483-1105289 7316UP-483-1105289.WholeExome.RP-1303.bam 20512771626 BAM NA 367f70e0-fa2a-4680-bc61-984611e74928 7932b754fb2c0bd80ccc9a514dd6f8ab hg19 Blood Derived Normal 1105289 +C223491.WXS.R.ADNA_41e87f66 C223491 GBM WXS recurrent_tumor 7316UP-483 7316UP-483.WholeExome.RP-1303.bam 30751621621 BAM NA 8fb10564-d2e3-409b-9a06-042169259b88 9c43dda87e49a102bab58208a5a39247 hg19 Recurrent Tumor SM-JU34O sample_tag=ADNA_41e87f66 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C223491.WXS.R C223491 GBM WXS recurrent_tumor 7316UP-483-1105191 7316UP-483-1105191.WholeExome.RP-1303.bam 15164145344 BAM NA fd8663d4-c762-4db2-b8a0-031382dc3666 20dee35180874ce7ded6069ea7c7aeba hg19 Recurrent Tumor 1105191 C224106.MethArray.Green.R.ADNA_b88a1276 C224106 GBM Methylation Array recurrent_tumor 7316UP-895 205555380005_R02C01_Grn.idat 13677900 IDAT Green ee637352-7622-4e78-8f49-4cb6f331c81d 80dec5d35eebcaa1deb4e5bb7606bd47 NA Recurrent Tumor SM-JU32Z sample_tag=ADNA_b88a1276 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C224106.MethArray.Red.R.ADNA_b88a1276 C224106 GBM Methylation Array recurrent_tumor 7316UP-895 205555380005_R02C01_Red.idat 13677900 IDAT Red d9924715-fa6d-4c08-b850-4512b5933c34 b995417ecc9afd4ecd1c21cdb1c9b668 NA Recurrent Tumor SM-JU32Z sample_tag=ADNA_b88a1276 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot @@ -201,6 +217,7 @@ C224106.WGS.T C224106 GBM WGS tumor 7316UP-287-1105192 7316UP-287-1105192.WholeG C224106.WXS.N C224106 GBM WXS blood_normal 7316UP-287-1105215 7316UP-287-1105215.WholeExome.RP-1303.bam 28440047682 BAM NA 33ee6834-8406-45cc-ac7c-2f50544151bc aed1e3168ad3e0b30c4ec492cac763d0 hg19 Blood Derived Normal 1105215 C224106.WXS.R.ADNA_b88a1276 C224106 GBM WXS recurrent_tumor 7316UP-895 7316UP-895.WholeExome.RP-1303.bam 31935073467 BAM NA fad3c698-2343-44c6-964a-bc3ef345becc 10954a95e1303d746ae1dd550acf104b hg19 Recurrent Tumor SM-JU32Z sample_tag=ADNA_b88a1276 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C224106.WXS.R C224106 GBM WXS recurrent_tumor 7316UP-895-1105233 7316UP-895-1105233.WholeExome.RP-1303.bam 20933872946 BAM NA 597f884b-d907-4300-8505-658bee55f16f c60da75d2d6c71982090f7b645d81df0 hg19 Recurrent Tumor 1105233 +C224106.WXS.T.ADNA_4208c7cd C224106 GBM WXS tumor 7316UP-287 7316UP-287.WholeExome.RP-1303.bam 26187586378 BAM NA 4e2edbeb-e029-4333-9431-a9d342ee7bff 533b74a6248fe294c445c8a905a140cf hg19 Primary Tumor SM-JU32N sample_tag=ADNA_4208c7cd Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C224106.WXS.T C224106 GBM WXS tumor 7316UP-287-1105192 7316UP-287-1105192.WholeExome.RP-1303.bam 19953957842 BAM NA 3bf37e1a-b64b-422e-9a8e-615a7be715d1 bd66881d33a80743296fbe8bfaee4c8e hg19 Primary Tumor 1105192 C224967.MethArray.Green.R.ADNA_97671269 C224967 GBM Methylation Array recurrent_tumor 7316UP-1273 205828590069_R02C01_Grn.idat 13677905 IDAT Green 4002cea1-cf8f-4e48-a219-cf7e1964c589 cd9f6a2ddcba09c12a31ea8f77faa598 NA Recurrent Tumor SM-JU33C sample_tag=ADNA_97671269 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C224967.MethArray.Green.T.ADNA_ef1b8e33 C224967 GBM Methylation Array tumor 7316UP-743 205705520055_R01C01_Grn.idat 13677900 IDAT Green b500a541-9378-4e4c-88ab-66da85c4df36 79e729c911ac2d984e47d38769907d1b NA Primary Tumor SM-JU33O sample_tag=ADNA_ef1b8e33 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot @@ -213,8 +230,11 @@ C224967.RNA-Seq.R1.T C224967 GBM RNA-Seq tumor 7316UP-743-1104807 210811_UNC31-K C224967.RNA-Seq.R2.R C224967 GBM RNA-Seq recurrent_tumor 7316UP-1273-1104786 210713_UNC32-K00270_0291_AHLK5VBBXY_CCGCGGTT-AGCGCTAG_S30_L008_R2_001.fastq.gz 4177127662 FASTQ NA f544bc29-8e0c-4054-b284-10d737bbf7fa b157aee2da7fad0c0a0bb826f0f7bfb9 NA Recurrent Tumor 1104786 C224967.RNA-Seq.R2.T C224967 GBM RNA-Seq tumor 7316UP-743-1104807 210811_UNC31-K00269_0301_AHLLC5BBXY_ATATGGAT-CTGTATTA_S2_L001_R2_001.fastq.gz 3726614863 FASTQ NA e408bab8-2f30-42ba-9eeb-cc5c74ccfa0c b4887b93df864da46fa378a4374ab08e NA Primary Tumor 1104807 C224967.WGS.R C224967 GBM WGS recurrent_tumor 7316UP-1273-1105249 7316UP-1273-1105249.WholeGenome.RP-2158.bam 45552404417 BAM NA 44bc125a-5a87-4639-be3a-23e0d55a33cd 78c6125ab72d5a8d2f9714c84c9617c0 hg19 Recurrent Tumor 1105249 +C224967.WGS.T.ADNA_ef1b8e33 C224967 GBM WGS tumor 7316UP-743 7316UP-743.WholeGenome.RP-2158.bam 58240269975 BAM NA 4578becb-41cf-4fc7-b259-ee6f44f09eaa aade7bc9761d2e3465391e09307baeff hg19 Primary Tumor SM-JU33O sample_tag=ADNA_ef1b8e33 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C224967.WXS.N C224967 GBM WXS blood_normal 7316UP-743-1105291 7316UP-743-1105291.WholeExome.RP-1303.bam 26575645784 BAM NA 9d3f989c-48b1-449b-9552-e9f9c47fd3be a62b4c12bea5582bb8552bb220518bb7 hg19 Blood Derived Normal 1105291 +C224967.WXS.R.ADNA_97671269 C224967 GBM WXS recurrent_tumor 7316UP-1273 7316UP-1273.WholeExome.RP-1303.bam 27413593642 BAM NA f5a8ace0-8716-4e5d-af37-d12769d3edc6 e2741b38c4d431dfbaeb72013ed8aa51 hg19 Recurrent Tumor SM-JU33C sample_tag=ADNA_97671269 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C224967.WXS.R C224967 GBM WXS recurrent_tumor 7316UP-1273-1105249 7316UP-1273-1105249.WholeExome.RP-1303.bam 21705660534 BAM NA 399d85bf-b1d9-4b95-bef3-dc2eea0211c5 38fc15dc9b25761a83a4c9b9561126e7 hg19 Recurrent Tumor 1105249 +C224967.WXS.T.ADNA_ef1b8e33 C224967 GBM WXS tumor 7316UP-743 7316UP-743.WholeExome.RP-1303.bam 31009431067 BAM NA dc44ea94-f178-4e1b-858b-a0f67cca2112 7e7177cc1a11ab3d1d8aa31148f43e5c hg19 Primary Tumor SM-JU33O sample_tag=ADNA_ef1b8e33 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C224967.WXS.T C224967 GBM WXS tumor 7316UP-743-1105199 7316UP-743-1105199.WholeExome.RP-1303.bam 25027597697 BAM NA 4099c82e-80c2-44c2-935b-44c9ded7faae 861fcc1589cfb9b045ba18b016b949cf hg19 Primary Tumor 1105199 C229764.MethArray.Green.R.ADNA_48c7f5e2 C229764 GBM Methylation Array recurrent_tumor 7316UP-2110 205705520162_R01C01_Grn.idat 13677900 IDAT Green 08f543cf-ce57-48bc-89c6-7b5051512dc1 b4be3e822496aa84c80a03a5ca68cf94 NA Recurrent Tumor SM-JU341 sample_tag=ADNA_48c7f5e2 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C229764.MethArray.Red.R.ADNA_48c7f5e2 C229764 GBM Methylation Array recurrent_tumor 7316UP-2110 205705520162_R01C01_Red.idat 13677900 IDAT Red a03c58df-4dd2-41f7-8304-884fa6247a34 d650a3dd44d60aa7e78cf1d679363114 NA Recurrent Tumor SM-JU341 sample_tag=ADNA_48c7f5e2 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot @@ -235,11 +255,13 @@ C229764.WXS.T C229764 GBM WXS tumor 7316UP-109-1105242 7316UP-109-1105242.WholeE C231855.MethArray.Green.T.ADNA_40a9c1b9 C231855 GBM Methylation Array tumor 7316UP-160 205707890106_R01C01_Grn.idat 13677901 IDAT Green 0901786f-574b-4f04-b20f-757e7f2faf74 6e05a44e895b04ec3f8e5ccb721ed8c2 NA Primary Tumor SM-JU34D sample_tag=ADNA_40a9c1b9 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C231855.MethArray.Red.T.ADNA_40a9c1b9 C231855 GBM Methylation Array tumor 7316UP-160 205707890106_R01C01_Red.idat 13677901 IDAT Red a5d3cfa1-7532-41cf-bcd2-143b08da96f2 a5ed924d837365764d706b862619dc05 NA Primary Tumor SM-JU34D sample_tag=ADNA_40a9c1b9 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C231855.miRNA-Seq.R C231855 GBM miRNA-Seq recurrent_tumor 7316UP-421-1104795 210817_UNC31-K00269_0302_AHLCTHBBXY_ACTTGA_S23_L002_R1_001.unaln.bam 168987687 BAM NA 06659363-cbdb-4a45-b54f-69521e2def39 b75a10cdd03feb013a83b8c074bfa780 NA Recurrent Tumor 1104795 +C231855.miRNA-Seq.T C231855 GBM miRNA-Seq tumor 7316UP-160-1104784 220125_UNC32-K00270_0311_AHMNYYBBXY_CTAGCT_S11_L002_R1_001.unaln.bam 307910922 BAM NA 2873f023-f443-477c-8520-be60df760482 e35100b6aeabb9d3a4c83c7f838f9e68 NA Primary Tumor 1104784 C231855.RNA-Seq.R1.R C231855 GBM RNA-Seq recurrent_tumor 7316UP-421-1104795 210811_UNC31-K00269_0301_AHLLC5BBXY_GCGCAAGC-TCACGCCG_S3_L001_R1_001.fastq.gz 3391269224 FASTQ NA 5b018459-1fb0-458c-8d4b-40d6ace7089e ce026a24fc6e1bbe4c13f441f94f55da NA Recurrent Tumor 1104795 C231855.RNA-Seq.R1.T C231855 GBM RNA-Seq tumor 7316UP-160-1104784 210811_UNC31-K00269_0301_AHLLC5BBXY_AACAGGTT-ATACCAAG_S9_L003_R1_001.fastq.gz 4752824534 FASTQ NA 6a569c62-2dfe-4109-803d-dab5026bfec2 b78042be5bd11ead6f84cfc811983fd3 NA Primary Tumor 1104784 C231855.RNA-Seq.R2.R C231855 GBM RNA-Seq recurrent_tumor 7316UP-421-1104795 210811_UNC31-K00269_0301_AHLLC5BBXY_GCGCAAGC-TCACGCCG_S3_L001_R2_001.fastq.gz 3882186982 FASTQ NA 9d90d560-17cb-4038-a922-8e5f8d738b82 44abf091804b24627965df3cf9e17648 NA Recurrent Tumor 1104795 C231855.RNA-Seq.R2.T C231855 GBM RNA-Seq tumor 7316UP-160-1104784 210811_UNC31-K00269_0301_AHLLC5BBXY_AACAGGTT-ATACCAAG_S9_L003_R2_001.fastq.gz 5069843304 FASTQ NA e487d435-f110-46da-9ed6-58814f3d33c4 8d70933e52650efd4db13d48eac69199 NA Primary Tumor 1104784 C231855.WGS.R C231855 GBM WGS recurrent_tumor 7316UP-421-1105260 7316UP-421-1105260.WholeGenome.RP-2158.bam 71075559854 BAM NA d3f53b40-80ff-4eb2-bbba-451850dcd22b 08eba3c821f43a3e34f3c5853b0cda05 hg19 Recurrent Tumor 1105260 +C231855.WGS.T.ADNA_40a9c1b9 C231855 GBM WGS tumor 7316UP-160 7316UP-160.WholeGenome.RP-2158.bam 52825456796 BAM NA f0e32f34-00b0-429a-b9fc-697388a7c224 63b095da1dde6e564e64d109d7bd66b4 hg19 Primary Tumor SM-JU34D sample_tag=ADNA_40a9c1b9 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C231855.WXS.N C231855 GBM WXS blood_normal 7316UP-421-1105288 7316UP-421-1105288.WholeExome.RP-1303.bam 20989442407 BAM NA a5f3e504-6c0f-4d0a-87a1-3d084a2f2734 b3327cf39590ba0487c935545ebd4238 hg19 Blood Derived Normal 1105288 C231855.WXS.R C231855 GBM WXS recurrent_tumor 7316UP-421-1105260 7316UP-421-1105260.WholeExome.RP-1303.bam 27632790176 BAM NA cf798c5b-546f-48b6-ac81-c41d4bf465a0 22481c96d46b469c8a3953bcc8afa9dc hg19 Recurrent Tumor 1105260 C231855.WXS.T.ADNA_40a9c1b9 C231855 GBM WXS tumor 7316UP-160 7316UP-160.WholeExome.RP-1303.bam 22236292610 BAM NA 11d145b2-db2c-459a-aceb-db63d81a4a5e 1e9410e4143f1673a6d51d68c543d85d hg19 Primary Tumor SM-JU34D sample_tag=ADNA_40a9c1b9 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot @@ -264,6 +286,7 @@ C234192.WXS.N C234192 GBM WXS blood_normal 7316UP-386-1105286 7316UP-386-1105286 C234192.WXS.R.ADNA_27ea3fbd C234192 GBM WXS recurrent_tumor 7316UP-1206-1105262 7316UP-1206-1105262.WholeExome.RP-1303.bam 31598002776 BAM NA 8486ea12-0703-402e-98fe-20dc5fe589ae 7846bc703606e7a3d76f523668914855 hg19 Recurrent Tumor 1105262 sample_tag=ADNA_27ea3fbd Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C234192.WXS.R.ADNA_34cd9d6c C234192 GBM WXS recurrent_tumor 7316UP-386 7316UP-386.WholeExome.RP-1303.bam 22730648817 BAM NA 443f69b6-ca13-48ca-934b-a1a8e5b89703 221351910a8a5d5bde697e227d49498a hg19 Recurrent Tumor SM-JU32O sample_tag=ADNA_34cd9d6c Duplicate Item: CHOP GBM Triplicate Recurrent Tumor DNA Aliquot C234192.WXS.R C234192 GBM WXS recurrent_tumor 7316UP-386-1105200 7316UP-386-1105200.WholeExome.RP-1303.bam 20806055854 BAM NA 7da8daf1-63dc-454c-beae-7c7ddd6a8500 daa94493f545d94e1f2811ebc4522d34 hg19 Recurrent Tumor 1105200 +C234192.WXS.T.ADNA_a92ddca1 C234192 GBM WXS tumor 7316UP-181 7316UP-181.WholeExome.RP-1303.bam 22982636961 BAM NA 4474df2a-caa8-4b06-898a-397c1ac6da64 2c5d61ed98dbb5fa832eee0c6954eb41 hg19 Primary Tumor SM-JU352 sample_tag=ADNA_a92ddca1 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C234192.WXS.T C234192 GBM WXS tumor 7316UP-181-1105194 7316UP-181-1105194.WholeExome.RP-1303.bam 25971653894 BAM NA b6c516d7-ef12-420e-8bf5-bde06419732f 6c206fd9b0e7b3d6819cd203cea7f2d5 hg19 Primary Tumor 1105194 C2415597.MethArray.Green.R.ADNA_9de3473e C2415597 GBM Methylation Array recurrent_tumor 7316UP-3301 205854120012_R01C01_Grn.idat 13677900 IDAT Green 761bb9fa-b650-47b4-b493-c99cee85e208 2e05a5f0c43a60872a00d9b838abc221 NA Recurrent Tumor SM-JU33D sample_tag=ADNA_9de3473e Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C2415597.MethArray.Red.R.ADNA_9de3473e C2415597 GBM Methylation Array recurrent_tumor 7316UP-3301 205854120012_R01C01_Red.idat 13677900 IDAT Red 2d4a84dc-f721-4129-97a9-a5c795530243 58cf9a92852a304891bfa66e2e8053dd NA Recurrent Tumor SM-JU33D sample_tag=ADNA_9de3473e Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot @@ -281,6 +304,7 @@ C2415597.WXS.R C2415597 GBM WXS recurrent_tumor 7316UP-3301-1105203 7316UP-3301- C2415597.WXS.T C2415597 GBM WXS tumor 7316UP-3213-1105267 7316UP-3213-1105267.WholeExome.RP-1303.bam 22767710482 BAM NA 0abd93c6-12d9-44b5-8d34-77397cbce77f 2d1d773c3bfee1ef5b9471f8f0714c50 hg19 Primary Tumor 1105267 C243048.MethArray.Green.T.ADNA_94a7b89d C243048 GBM Methylation Array tumor 7316UP-213 205555380040_R01C01_Grn.idat 13677900 IDAT Green 52b82f22-4b5b-42a6-9fc3-77dd32a3f8f7 bb109d79b16ccdaccb28ac0e25dc0a28 NA Primary Tumor SM-JU33P sample_tag=ADNA_94a7b89d Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C243048.MethArray.Red.T.ADNA_94a7b89d C243048 GBM Methylation Array tumor 7316UP-213 205555380040_R01C01_Red.idat 13677900 IDAT Red 685bb2b2-efbd-4687-b197-07900da31d53 9c96e31e74e37d97a3f3045190d6bce7 NA Primary Tumor SM-JU33P sample_tag=ADNA_94a7b89d Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot +C243048.miRNA-Seq.R C243048 GBM miRNA-Seq recurrent_tumor 7316UP-1282-1104796 220125_UNC32-K00270_0311_AHMNYYBBXY_CTCAGA_S13_L002_R1_001.unaln.bam 283713764 BAM NA 03d33d85-051a-47ae-9c8b-b89b78fd4193 e1a8739e309877b12cafb4bcc0635e69 NA Recurrent Tumor 1104796 C243048.miRNA-Seq.T C243048 GBM miRNA-Seq tumor 7316UP-213-1104783 210817_UNC31-K00269_0302_AHLCTHBBXY_TATAAT_S36_L002_R1_001.unaln.bam 247388747 BAM NA 596d52ea-e0db-433d-a082-0ea1d6919f9b 9da4910950727769133ad013195fddd9 NA Primary Tumor 1104783 C243048.RNA-Seq.R1.R C243048 GBM RNA-Seq recurrent_tumor 7316UP-1282-1104796 210811_UNC31-K00269_0301_AHLLC5BBXY_ATATCTCG-ATCTTAGT_S10_L003_R1_001.fastq.gz 3441784538 FASTQ NA 363afde2-4960-4b58-9fb5-783487373231 93559bf7620c9800fea14ec277199af0 NA Recurrent Tumor 1104796 C243048.RNA-Seq.R1.T C243048 GBM RNA-Seq tumor 7316UP-213-1104783 210713_UNC32-K00270_0291_AHLK5VBBXY_CCAAGTCT-AAGGATGA_S28_L007_R1_001.fastq.gz 4481092171 FASTQ NA 098febb3-ede7-4533-b9f9-043c8d664e30 90390ef8dce83b1459486e2e9262deca NA Primary Tumor 1104783 @@ -304,9 +328,13 @@ C243909.RNA-Seq.R1.R C243909 GBM RNA-Seq recurrent_tumor 7316UP-485-1104772 2107 C243909.RNA-Seq.R1.T C243909 GBM RNA-Seq tumor 7316UP-219-1104778 210713_UNC32-K00270_0291_AHLK5VBBXY_TCTCTACT-CGCGGTTC_S24_L006_R1_001.fastq.gz 3996224097 FASTQ NA 8bfdab73-70f3-4d2b-8e02-8080bd13b2e9 895870b0856ed5f1a61597cf0351caec NA Primary Tumor 1104778 C243909.RNA-Seq.R2.R C243909 GBM RNA-Seq recurrent_tumor 7316UP-485-1104772 210713_UNC32-K00270_0291_AHLK5VBBXY_CAAGCTAG-ACATAGCG_S27_L007_R2_001.fastq.gz 4036597415 FASTQ NA 71ed75b3-d868-4335-b995-535c8d4f07c0 f1ef4a273848085f7986a3ee478a88c4 NA Recurrent Tumor 1104772 C243909.RNA-Seq.R2.T C243909 GBM RNA-Seq tumor 7316UP-219-1104778 210713_UNC32-K00270_0291_AHLK5VBBXY_TCTCTACT-CGCGGTTC_S24_L006_R2_001.fastq.gz 4320994288 FASTQ NA 88b1f7e9-068a-472e-bfd3-7b557881e6f9 afa333c33141fb786ee55df2d19d2ab7 NA Primary Tumor 1104778 +C243909.WGS.R.ADNA_a88bda53 C243909 GBM WGS recurrent_tumor 7316UP-485 7316UP-485.WholeGenome.RP-2158.bam 56426148983 BAM NA e62472d9-0680-4d19-be0f-59087d3ae5d8 77ee92da66a3ddd288a209ebfbc82a85 hg19 Recurrent Tumor SM-JU34E sample_tag=ADNA_a88bda53 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot +C243909.WGS.T.ADNA_74725183 C243909 GBM WGS tumor 7316UP-219 7316UP-219.WholeGenome.RP-2158.bam 52714327427 BAM NA c5ffcd00-ea30-4616-8b67-a26c7fea6802 e28ddb74754aaa304a972daebc9b6f05 hg19 Primary Tumor SM-JU342 sample_tag=ADNA_74725183 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C243909.WGS.T C243909 GBM WGS tumor 7316UP-219-1105241 7316UP-219-1105241.WholeGenome.RP-2158.bam 56915003249 BAM NA 54da4592-2a1c-4696-87e4-a0b8f2b0eaed 1f6438cd41793624a477b9365b64e503 hg19 Primary Tumor 1105241 C243909.WXS.N C243909 GBM WXS blood_normal 7316UP-219-1105279 7316UP-219-1105279.WholeExome.RP-1303.bam 28502225983 BAM NA d290276a-8306-4336-921a-16e61bdc4ead edcb9ca772b5efa4d7e7aa98e9bdcecc hg19 Blood Derived Normal 1105279 +C243909.WXS.R.ADNA_a88bda53 C243909 GBM WXS recurrent_tumor 7316UP-485 7316UP-485.WholeExome.RP-1303.bam 14857742498 BAM NA 1df0c862-5d9b-4eef-948d-684bd79c2ffb eb3b8d7d6c31c06329fbca0add2a2928 hg19 Recurrent Tumor SM-JU34E sample_tag=ADNA_a88bda53 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C243909.WXS.R C243909 GBM WXS recurrent_tumor 7316UP-485-1105235 7316UP-485-1105235.WholeExome.RP-1303.bam 23297906342 BAM NA abe1406a-385e-4b82-bbe8-aac969c91966 0c2c2a852f2fab6e971960bc9f11754e hg19 Recurrent Tumor 1105235 +C243909.WXS.T.ADNA_74725183 C243909 GBM WXS tumor 7316UP-219 7316UP-219.WholeExome.RP-1303.bam 27485029046 BAM NA 65aea2ff-8477-463c-91eb-14b62c217e27 1f55e2e7a4d0da953e44275b63f1d071 hg19 Primary Tumor SM-JU342 sample_tag=ADNA_74725183 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C243909.WXS.T C243909 GBM WXS tumor 7316UP-219-1105241 7316UP-219-1105241.WholeExome.RP-1303.bam 22953350618 BAM NA 96c59667-865e-40c1-8dd9-cd08e128daeb 1f248af4f100a25c1ade22e8163687fc hg19 Primary Tumor 1105241 C247230.MethArray.Green.R.ADNA_e9d04cd8 C247230 GBM Methylation Array recurrent_tumor 7316UP-243 205705520056_R02C01_Grn.idat 13677900 IDAT Green d7e68fbf-2764-46c9-80b6-ca329aa55bb8 7da17e3377f4bbf318eee4d289a72aea NA Recurrent Tumor SM-JU34Q sample_tag=ADNA_e9d04cd8 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C247230.MethArray.Green.T.ADNA_0aa190bd C247230 GBM Methylation Array tumor 7316UP-8 205854150029_R02C01_Grn.idat 13677900 IDAT Green 597a93d3-033b-4efc-b7c7-7b7628f9d4c7 c936ea2788968a5d6e68c2f32854e1fb NA Primary Tumor SM-JU353 sample_tag=ADNA_0aa190bd Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot @@ -318,6 +346,9 @@ C247230.RNA-Seq.R1.R C247230 GBM RNA-Seq recurrent_tumor 7316UP-243-1104766 2108 C247230.RNA-Seq.R1.T C247230 GBM RNA-Seq tumor 7316UP-8-1104780 210713_UNC32-K00270_0291_AHLK5VBBXY_GACCTGAA-TTGGTGAG_S22_L006_R1_001.fastq.gz 3837839898 FASTQ NA 4c52701e-f9d9-4fbf-9530-2d8e420b5078 6225a9ed63e76e993d364df634351f64 NA Primary Tumor 1104780 C247230.RNA-Seq.R2.R C247230 GBM RNA-Seq recurrent_tumor 7316UP-243-1104766 210811_UNC31-K00269_0301_AHLLC5BBXY_GCAATGCA-GGAACGTT_S7_L002_R2_001.fastq.gz 3601477757 FASTQ NA 25e17967-5374-45f3-a76c-1d236667a8b2 19ae8c3aa7e21f1b44a8e9dc35127b0f NA Recurrent Tumor 1104766 C247230.RNA-Seq.R2.T C247230 GBM RNA-Seq tumor 7316UP-8-1104780 210713_UNC32-K00270_0291_AHLK5VBBXY_GACCTGAA-TTGGTGAG_S22_L006_R2_001.fastq.gz 4058273725 FASTQ NA bd9ebef7-47a0-4365-a921-12a36feb035b a5e0407cc240f2db02daaf9a2406be4c NA Primary Tumor 1104780 +C247230.WGS.N C247230 GBM WGS blood_normal 7316UP-243-1105280 7316UP-243-1105280.WholeGenome.RP-2158.bam 57314256084 BAM NA 58a2b1ac-1bcf-4c3f-a404-678d5503f37a 621d9c9991da3c7be4cef6abbb190723 hg19 Blood Derived Normal 1105280 +C247230.WGS.R.ADNA_e9d04cd8 C247230 GBM WGS recurrent_tumor 7316UP-243 7316UP-243.WholeGenome.RP-2158.bam 47459738308 BAM NA 8058370c-7e94-45d2-9131-6ff34cce28ed 897785648732aeff71efb9fc43d61849 hg19 Recurrent Tumor SM-JU34Q sample_tag=ADNA_e9d04cd8 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot +C247230.WGS.T.ADNA_0aa190bd C247230 GBM WGS tumor 7316UP-8 7316UP-8.WholeGenome.RP-2158.bam 53905269524 BAM NA 65b28340-14d4-4169-a018-5edd58793a32 9aa1a40a87adf1df7f02a06060b6ddfe hg19 Primary Tumor SM-JU353 sample_tag=ADNA_0aa190bd Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C247230.WXS.N C247230 GBM WXS blood_normal 7316UP-243-1105280 7316UP-243-1105280.WholeExome.RP-1303.bam 25993398731 BAM NA 9b772baf-d183-401e-a925-bf90c0717c52 677cad82b6859274a120195b86169063 hg19 Blood Derived Normal 1105280 C247230.WXS.R.ADNA_e9d04cd8 C247230 GBM WXS recurrent_tumor 7316UP-243 7316UP-243.WholeExome.RP-1303.bam 22789049179 BAM NA 9ce277ba-4d70-49f1-9a79-517b1a0abde6 221dd5ca5dce51353687da7f99ec893d hg19 Recurrent Tumor SM-JU34Q sample_tag=ADNA_e9d04cd8 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C247230.WXS.R C247230 GBM WXS recurrent_tumor 7316UP-243-1105229 7316UP-243-1105229.WholeExome.RP-1303.bam 22180737177 BAM NA b8807cca-8f0f-4399-861a-7a14e01a97f2 9a67b576423d633aab96f2e0cf9f723e hg19 Recurrent Tumor 1105229 @@ -337,6 +368,7 @@ C259161.WGS.T.ADNA_5c7e3295 C259161 GBM WGS tumor 7316UP-293 7316UP-293.WholeGen C259161.WGS.T C259161 GBM WGS tumor 7316UP-293-1105250 7316UP-293-1105250.WholeGenome.RP-2158.bam 57788463110 BAM NA 74371bec-c399-456a-b912-e49ef8cf7290 893770295090e3ebf3c290994a74922f hg19 Primary Tumor 1105250 C259161.WXS.N C259161 GBM WXS blood_normal 7316UP-293-1105283 7316UP-293-1105283.WholeExome.RP-1303.bam 25717997268 BAM NA 5fe5e6d3-0f58-49cf-b0f2-861cc836f83b 4eaed368a3d54ad6e801c0f1f467c88b hg19 Blood Derived Normal 1105283 C259161.WXS.R C259161 GBM WXS recurrent_tumor 7316UP-349-1105257 7316UP-349-1105257.WholeExome.RP-1303.bam 29700714795 BAM NA f12b0fa6-8ad9-4f0b-a9e6-e27e6e26bec5 ea4f85779c10bb585a5e94dec29a171a hg19 Recurrent Tumor 1105257 +C259161.WXS.T.ADNA_5c7e3295 C259161 GBM WXS tumor 7316UP-293 7316UP-293.WholeExome.RP-1303.bam 21468924973 BAM NA c06021b5-0843-46e8-a2f7-9bbdd7275f57 9afe38d231ab4feb975539d480fe835a hg19 Primary Tumor SM-JU32P sample_tag=ADNA_5c7e3295 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C259161.WXS.T C259161 GBM WXS tumor 7316UP-293-1105250 7316UP-293-1105250.WholeExome.RP-1303.bam 29802893632 BAM NA f16c354e-4c82-4248-a6d1-2d52ed2aaf13 626cd0ab2494875a3491416c19c1eb74 hg19 Primary Tumor 1105250 C266664.MethArray.Green.R.ADNA_f5846b1c C266664 GBM Methylation Array recurrent_tumor 7316UP-553 205705520056_R01C01_Grn.idat 13677900 IDAT Green a5c8ec4f-e9b9-4dab-9777-b85dea6cd258 d513d197146776d07e147cd631af2cf4 NA Recurrent Tumor SM-JU33E sample_tag=ADNA_f5846b1c Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C266664.MethArray.Green.T.ADNA_5dbc58a2 C266664 GBM Methylation Array tumor 7316UP-393 205707890106_R07C01_Grn.idat 13677900 IDAT Green a32c7219-318d-484b-8563-d9d3423acafc e353cda16efd4bf59828fecada5ed772 NA Primary Tumor SM-JU332 sample_tag=ADNA_5dbc58a2 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot @@ -351,6 +383,7 @@ C266664.WGS.R.ADNA_f5846b1c C266664 GBM WGS recurrent_tumor 7316UP-553 7316UP-55 C266664.WGS.R C266664 GBM WGS recurrent_tumor 7316UP-553-1105234 7316UP-553-1105234.WholeGenome.RP-2158.bam 66530087101 BAM NA 9c7c70af-1d81-42d2-859e-3b613a2c0d93 30b1c57fec53b1c25996f3a096ab49df hg19 Recurrent Tumor 1105234 C266664.WGS.T.ADNA_5dbc58a2 C266664 GBM WGS tumor 7316UP-393 7316UP-393.WholeGenome.RP-2158.bam 61362965684 BAM NA 455c35ce-ea41-4b99-bb0a-46816906b859 2209a014757265b8f731e786c2459948 hg19 Primary Tumor SM-JU332 sample_tag=ADNA_5dbc58a2 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C266664.WXS.N C266664 GBM WXS blood_normal 7316UP-393-1105287 7316UP-393-1105287.WholeExome.RP-1303.bam 20596651439 BAM NA d2dd83e7-1770-4ffa-bf6b-41ba9814306c 6c211d9fabce2892cf5da12bfb4abd5d hg19 Blood Derived Normal 1105287 +C266664.WXS.R.ADNA_f5846b1c C266664 GBM WXS recurrent_tumor 7316UP-553 7316UP-553.WholeExome.RP-1303.bam 24922371326 BAM NA 11bcff0f-cb87-409b-b58e-ff8859203502 78f9623b2248c4ea51ec63398690b1ca hg19 Recurrent Tumor SM-JU33E sample_tag=ADNA_f5846b1c Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C266664.WXS.R C266664 GBM WXS recurrent_tumor 7316UP-553-1105234 7316UP-553-1105234.WholeExome.RP-1303.bam 24219633494 BAM NA 16f314d3-9c0d-4227-8af9-67e9e5027f8e 2c303e1557bd8d84beab270927f52e31 hg19 Recurrent Tumor 1105234 C266664.WXS.T.ADNA_5dbc58a2 C266664 GBM WXS tumor 7316UP-393 7316UP-393.WholeExome.RP-1303.bam 32889072571 BAM NA 1b809ed9-7f11-4a12-9402-43c8f12c93c8 bd066a01085fa2594c1f047c7332b76f hg19 Primary Tumor SM-JU332 sample_tag=ADNA_5dbc58a2 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C266664.WXS.T C266664 GBM WXS tumor 7316UP-393-1105269 7316UP-393-1105269.WholeExome.RP-1303.bam 31877144001 BAM NA 0b7af748-7592-49d9-957e-44e63c0f6e26 913e998c980dfa73b834dd0651a06704 hg19 Primary Tumor 1105269 @@ -367,7 +400,9 @@ C283515.RNA-Seq.R2.T C283515 GBM RNA-Seq tumor 7316UP-504-1104814 210713_UNC32-K C283515.WGS.N C283515 GBM WGS blood_normal 7316UP-504-1105290 7316UP-504-1105290.WholeGenome.RP-2158.bam 62174322060 BAM NA 7055e943-91d1-49a2-9191-e55ab3342d77 f131f1eafa114d3fb6290627ae38941f hg19 Blood Derived Normal 1105290 C283515.WGS.R.ADNA_d7547996 C283515 GBM WGS recurrent_tumor 7316UP-984 7316UP-984.WholeGenome.RP-2158.bam 57538611032 BAM NA 03347b56-bd16-41d2-aa03-41d9bc0948e8 c00da0da73319343d312d409ceb16601 hg19 Recurrent Tumor SM-JU343 sample_tag=ADNA_d7547996 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C283515.WGS.R C283515 GBM WGS recurrent_tumor 7316UP-984-1105238 7316UP-984-1105238.WholeGenome.RP-2158.bam 52101605944 BAM NA 02afa2ed-7278-4978-828d-79cc756ab420 44bdf05312430f53b2a3db3e035eb1aa hg19 Recurrent Tumor 1105238 +C283515.WGS.T.ADNA_16970afa C283515 GBM WGS tumor 7316UP-504 7316UP-504.WholeGenome.RP-2158.bam 55266574890 BAM NA a2c6a65f-2824-4857-bee9-62b24c49d7de f9169f14213c88b33c991571fd353074 hg19 Primary Tumor SM-JU33Q sample_tag=ADNA_16970afa Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C283515.WXS.N C283515 GBM WXS blood_normal 7316UP-504-1105290 7316UP-504-1105290.WholeExome.RP-1303.bam 30160128143 BAM NA 57eb649b-72ad-45ff-81a0-def3c0c38505 fc4b503aefc35200b0d5bd0cf28e6603 hg19 Blood Derived Normal 1105290 +C283515.WXS.R.ADNA_d7547996 C283515 GBM WXS recurrent_tumor 7316UP-984 7316UP-984.WholeExome.RP-1303.bam 41783529224 BAM NA 2fa033b4-2cb4-4201-9f32-5b1f9bf295c8 273b984187750f3633d12b43c04e2c6a hg19 Recurrent Tumor SM-JU343 sample_tag=ADNA_d7547996 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C283515.WXS.R C283515 GBM WXS recurrent_tumor 7316UP-984-1105238 7316UP-984-1105238.WholeExome.RP-1303.bam 23037540650 BAM NA ced68fb8-edc5-4d38-9719-92d95bc271e2 859bc500872b17eb12a8f526187a918c hg19 Recurrent Tumor 1105238 C283515.WXS.T.ADNA_16970afa C283515 GBM WXS tumor 7316UP-504 7316UP-504.WholeExome.RP-1303.bam 29107187041 BAM NA 5c844fd6-1972-4f54-947f-9e802fba0a0c 6e2d29f1cdfc6bd359f87c98c9f0e68a hg19 Primary Tumor SM-JU33Q sample_tag=ADNA_16970afa Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C283515.WXS.T C283515 GBM WXS tumor 7316UP-504-1105193 7316UP-504-1105193.WholeExome.RP-1303.bam 20800549103 BAM NA 87308625-5842-4300-9202-99ba70be896c 2a7feccbefc6149e138f275c9ed84120 hg19 Primary Tumor 1105193 @@ -379,6 +414,7 @@ C287328.RNA-Seq.R1.R C287328 GBM RNA-Seq recurrent_tumor 7316UP-1135-1104790 210 C287328.RNA-Seq.R1.T C287328 GBM RNA-Seq tumor 7316UP-534-1104760 210713_UNC32-K00270_0291_AHLK5VBBXY_TTACAGGA-TGACAAGC_S4_L001_R1_001.fastq.gz 4021895606 FASTQ NA fc4ea868-9a1a-4f67-b490-3bdf3c5f6f57 58b126fcbf37c33292d56137155292c3 NA Primary Tumor 1104760 C287328.RNA-Seq.R2.R C287328 GBM RNA-Seq recurrent_tumor 7316UP-1135-1104790 210811_UNC31-K00269_0301_AHLLC5BBXY_GGAGCGTC-GTCCGTGC_S4_L001_R2_001.fastq.gz 4282999398 FASTQ NA 60d74915-2063-4467-930b-7845844fbd7b cb3087afa930b32fd23922a9c623fadf NA Recurrent Tumor 1104790 C287328.RNA-Seq.R2.T C287328 GBM RNA-Seq tumor 7316UP-534-1104760 210713_UNC32-K00270_0291_AHLK5VBBXY_TTACAGGA-TGACAAGC_S4_L001_R2_001.fastq.gz 4377680066 FASTQ NA 7bd1a599-d790-46ba-8d41-5c9532d1d232 ba61722d8b1b8d6d26596de4f1ef9a95 NA Primary Tumor 1104760 +C287328.WGS.R.ADNA_182ecc01 C287328 GBM WGS recurrent_tumor 7316UP-1135 7316UP-1135.WholeGenome.RP-2158.bam 53870261548 BAM NA 027df95d-7ce1-400b-bfbd-cc83e17b3d36 a64b2c596f6b949358c720da3bc13709 hg19 Recurrent Tumor SM-JU34F sample_tag=ADNA_182ecc01 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C287328.WGS.T C287328 GBM WGS tumor 7316UP-534-1105223 7316UP-534-1105223.WholeGenome.RP-2158.bam 61841060561 BAM NA 2f8bfbdb-c5ab-49f7-a398-3130a8a0f9ff 710f86254a1a9e9a702ceaaa9309c532 hg19 Primary Tumor 1105223 C287328.WXS.N C287328 GBM WXS blood_normal 7316UP-534-1105211 7316UP-534-1105211.WholeExome.RP-1303.bam 26048801345 BAM NA aa55c9e6-5f54-4642-a1f3-aa5110440f74 5dca536e5e11f8efadaadb3d771773d0 hg19 Blood Derived Normal 1105211 C287328.WXS.R C287328 GBM WXS recurrent_tumor 7316UP-1135-1105253 7316UP-1135-1105253.WholeExome.RP-1303.bam 23940352912 BAM NA 3c2e153d-dd81-4764-b6fd-a067c9a47d00 aa015c300f779af99554699383c99e68 hg19 Recurrent Tumor 1105253 @@ -399,6 +435,7 @@ C289419.WGS.T C289419 GBM WGS tumor 7316UP-547-1105270 7316UP-547-1105270.WholeG C289419.WXS.N C289419 GBM WXS blood_normal 7316UP-587-1105213 7316UP-587-1105213.WholeExome.RP-1303.bam 25496316378 BAM NA d0e8eefb-202d-4629-9acd-a94b4e1864a9 f0e7da22f9e92d614643f3de6a965016 hg19 Blood Derived Normal 1105213 C289419.WXS.R.ADNA_4747d148 C289419 GBM WXS recurrent_tumor 7316UP-587 7316UP-587.WholeExome.RP-1303.bam 25018513643 BAM NA 77a7e8d5-aa0f-4598-891a-4bd243f8d40d b7dc79e71b7b53f82af6dcb4cbb2ee22 hg19 Recurrent Tumor SM-JU32Q sample_tag=ADNA_4747d148 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C289419.WXS.R C289419 GBM WXS recurrent_tumor 7316UP-587-1105225 7316UP-587-1105225.WholeExome.RP-1303.bam 22476273863 BAM NA 39fd310f-e21d-484e-8764-95478d310803 be5b306cd0b545b5d3e9b9423d825f0d hg19 Recurrent Tumor 1105225 +C289419.WXS.T.ADNA_ebf29e44 C289419 GBM WXS tumor 7316UP-547 7316UP-547.WholeExome.RP-1303.bam 41078607528 BAM NA cc5a2977-b9a0-4292-9f2e-7e2fc2f183da 1773a62155a9c13ed4f01b9dd9af3c63 hg19 Primary Tumor SM-JU354 sample_tag=ADNA_ebf29e44 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C289419.WXS.T C289419 GBM WXS tumor 7316UP-547-1105270 7316UP-547-1105270.WholeExome.RP-1303.bam 27840699156 BAM NA a28c6ed4-40bd-415b-b9c7-590a62ec8555 4f192acbc7a33bd084063a0e6de9ab52 hg19 Primary Tumor 1105270 C298152.MethArray.Green.R.ADNA_59d69c3d C298152 GBM Methylation Array recurrent_tumor 7316UP-574 205555380064_R02C01_Grn.idat 13677900 IDAT Green edaada5d-7321-4231-ad85-c55ca06dd1f0 fc651c84f9143e9d3cb969da5084bacd NA Recurrent Tumor SM-JU33F sample_tag=ADNA_59d69c3d Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C298152.MethArray.Green.T.ADNA_cb6d6363 C298152 GBM Methylation Array tumor 7316UP-426 205854150030_R01C01_Grn.idat 13677903 IDAT Green 67b08732-3e8e-443c-a0ff-890c3d056538 d23037edf01388fa9b3628ff39337e42 NA Primary Tumor SM-JU333 sample_tag=ADNA_cb6d6363 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot @@ -411,18 +448,21 @@ C298152.RNA-Seq.R1.T C298152 GBM RNA-Seq tumor 7316UP-426-1104798 210811_UNC31-K C298152.RNA-Seq.R2.R C298152 GBM RNA-Seq recurrent_tumor 7316UP-574-1104761 210713_UNC32-K00270_0291_AHLK5VBBXY_TCCAACGC-TTGGACTT_S8_L002_R2_001.fastq.gz 4074073377 FASTQ NA 114ff49b-5eae-4fa1-8beb-1f4ae9cd8638 e349aa1bad948aafbbb6f63629cc8078 NA Recurrent Tumor 1104761 C298152.RNA-Seq.R2.T C298152 GBM RNA-Seq tumor 7316UP-426-1104798 210811_UNC31-K00269_0301_AHLLC5BBXY_GATCTATC-ATGAGGCT_S19_L005_R2_001.fastq.gz 4490884067 FASTQ NA 96a07c32-d50d-48da-b9da-fdd6b37eac1c 45cf661e35c8c83818097b8cc6ff1945 NA Primary Tumor 1104798 C298152.WGS.N C298152 GBM WGS blood_normal 7316UP-426-1105208 7316UP-426-1105208.WholeGenome.RP-2158.bam 52239643037 BAM NA 9ff18167-b8d3-4e22-9eb1-629b71ec9e77 a15b0b8109d677e2370d43cb3fb6333e hg19 Blood Derived Normal 1105208 +C298152.WGS.R.ADNA_59d69c3d C298152 GBM WGS recurrent_tumor 7316UP-574 7316UP-574.WholeGenome.RP-2158.bam 63229930879 BAM NA 28e504fa-7e48-49d6-84bd-6f5ab234a166 1a2d41be9ed8fdd547ea211146b54333 hg19 Recurrent Tumor SM-JU33F sample_tag=ADNA_59d69c3d Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C298152.WGS.R C298152 GBM WGS recurrent_tumor 7316UP-574-1105224 7316UP-574-1105224.WholeGenome.RP-2158.bam 41014723398 BAM NA c820d71e-45d9-42a5-afb5-f663772bf93d 082d90ab89f83e5c7d1ada5af831b00e hg19 Recurrent Tumor 1105224 C298152.WGS.T.ADNA_cb6d6363 C298152 GBM WGS tumor 7316UP-426 7316UP-426.WholeGenome.RP-2158.bam 58796212790 BAM NA 6cce2775-8b95-4d16-9214-9c8ea3941e00 ba0ee3e9e28eaaaf258434659d568a9f hg19 Primary Tumor SM-JU333 sample_tag=ADNA_cb6d6363 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C298152.WGS.T C298152 GBM WGS tumor 7316UP-426-1105263 7316UP-426-1105263.WholeGenome.RP-2158.bam 49286697852 BAM NA deecc9f5-4d5e-4279-8878-4dcf92b9cfee bf1510636c4b5b3ff54cfe5b7c7d406c hg19 Primary Tumor 1105263 C298152.WXS.N C298152 GBM WXS blood_normal 7316UP-426-1105208 7316UP-426-1105208.WholeExome.RP-1303.bam 25672742169 BAM NA 7d887a99-c66a-4607-90ca-bb8dfd2859f6 e7f60cbe275f19228a27c22a4b43cd23 hg19 Blood Derived Normal 1105208 C298152.WXS.R.ADNA_59d69c3d C298152 GBM WXS recurrent_tumor 7316UP-574 7316UP-574.WholeExome.RP-1303.bam 22111980929 BAM NA 39dcc1cd-5629-4b3b-9842-e60f92135a92 d0e7aa642f1dcfb5ab6cdf5567663ed4 hg19 Recurrent Tumor SM-JU33F sample_tag=ADNA_59d69c3d Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C298152.WXS.R C298152 GBM WXS recurrent_tumor 7316UP-574-1105224 7316UP-574-1105224.WholeExome.RP-1303.bam 22495865946 BAM NA f94f3fac-a780-4952-9e78-6e1ef8bbec9d 0e68bc03268af8b4b48bc603833bea35 hg19 Recurrent Tumor 1105224 +C298152.WXS.T.ADNA_cb6d6363 C298152 GBM WXS tumor 7316UP-426 7316UP-426.WholeExome.RP-1303.bam 29302896556 BAM NA 7d0482ee-89c1-4be6-80d5-b182cac71f87 84f5f9e3cb5183ba0a37b845535cdf96 hg19 Primary Tumor SM-JU333 sample_tag=ADNA_cb6d6363 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C298152.WXS.T C298152 GBM WXS tumor 7316UP-426-1105263 7316UP-426-1105263.WholeExome.RP-1303.bam 23507037727 BAM NA df9aa884-5b5b-4f19-89e3-732c4a4a45f3 d9b5e1d6e45d8acc274a4be19ac51d4a hg19 Primary Tumor 1105263 C317832.MethArray.Green.R C317832 GBM Methylation Array recurrent_tumor 7316UP-1110 205707890105_R02C01_Grn.idat 13677915 IDAT Green c1a97839-5772-45fa-91e7-426e00766c41 1d3cf81fbea33c2bdfe529ca75754a4e NA Recurrent Tumor SM-JU33R C317832.MethArray.Green.T.ADNA_4b7f0398 C317832 GBM Methylation Array tumor 7316UP-435 205705520087_R01C01_Grn.idat 13677900 IDAT Green d3bee606-2dd4-4825-8aaf-62a416cbdc44 3f48c6a17d87a4953d197e1ffd0fa080 NA Primary Tumor SM-JU344 sample_tag=ADNA_4b7f0398 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C317832.MethArray.Red.R C317832 GBM Methylation Array recurrent_tumor 7316UP-1110 205707890105_R02C01_Red.idat 13677915 IDAT Red 3710e0b6-75b9-466e-ba27-ee1120dca7e5 b4dc0f7f1242031ec281e7599ef03dda NA Recurrent Tumor SM-JU33R C317832.MethArray.Red.T.ADNA_4b7f0398 C317832 GBM Methylation Array tumor 7316UP-435 205705520087_R01C01_Red.idat 13677900 IDAT Red 3917878c-105b-473b-bca9-10ebb2572b6e 27747077b0dc4bebc0038a9316758c48 NA Primary Tumor SM-JU344 sample_tag=ADNA_4b7f0398 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C317832.WGS.N C317832 GBM WGS blood_normal 7316UP-435-1105209 7316UP-435-1105209.WholeGenome.RP-2158.bam 50849044617 BAM NA 91c2215c-9340-4ea4-a15e-783589faf7b6 5f75808e11126920dfc3de0631e194bd hg19 Blood Derived Normal 1105209 +C317832.WGS.R C317832 GBM WGS recurrent_tumor 7316UP-1110 7316UP-1110.WholeGenome.RP-2158.bam 56423818859 BAM NA 02482033-178d-4b98-a21e-18bcd9afb7b1 3975b29b666a7d917f8fb6c2078c99a0 hg19 Recurrent Tumor SM-JU33R C317832.WGS.T.ADNA_4b7f0398 C317832 GBM WGS tumor 7316UP-435 7316UP-435.WholeGenome.RP-2158.bam 53288759776 BAM NA e46c08f7-a93d-4c16-b65a-040c13d4e967 5268fb201438283101da1715c0a3d98d hg19 Primary Tumor SM-JU344 sample_tag=ADNA_4b7f0398 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C317832.WGS.T C317832 GBM WGS tumor 7316UP-435-1105196 7316UP-435-1105196.WholeGenome.RP-2158.bam 44958525818 BAM NA 84e61057-d0fb-4f04-b775-d961860a52f4 07cce07c15dcefaa9c313ada9d20d0f1 hg19 Primary Tumor 1105196 C317832.WXS.N C317832 GBM WXS blood_normal 7316UP-435-1105209 7316UP-435-1105209.WholeExome.RP-1303.bam 26556342235 BAM NA dcb115cc-591d-4eb6-a360-64d4b9d86ef8 31456f5e09f8ed511edbdd6a0646c2ce hg19 Blood Derived Normal 1105209 @@ -437,6 +477,7 @@ C330255.miRNA-Seq.R C330255 GBM miRNA-Seq recurrent_tumor 7316UP-498-1104769 210 C330255.RNA-Seq.R1.R C330255 GBM RNA-Seq recurrent_tumor 7316UP-498-1104769 210713_UNC32-K00270_0291_AHLK5VBBXY_GGTACCTT-AAGACGTC_S12_L003_R1_001.fastq.gz 3725717285 FASTQ NA ecde968c-8d85-48f1-9b99-adf4c4f9c39c 127d378f32cb62f791b7c600c1a1d704 NA Recurrent Tumor 1104769 C330255.RNA-Seq.R2.R C330255 GBM RNA-Seq recurrent_tumor 7316UP-498-1104769 210713_UNC32-K00270_0291_AHLK5VBBXY_GGTACCTT-AAGACGTC_S12_L003_R2_001.fastq.gz 3991687450 FASTQ NA 7d238885-5196-4422-9eed-12e61f4703be e4d93028a0615706eb24a91adebefa20 NA Recurrent Tumor 1104769 C330255.WGS.N C330255 GBM WGS blood_normal 7316UP-361-1105212 7316UP-361-1105212.WholeGenome.RP-2158.bam 52965115662 BAM NA 9a9eccce-70b8-4e66-85ab-24ec1508dee3 a4475bc46c1d95e0ba198b380171a8c2 hg19 Blood Derived Normal 1105212 +C330255.WGS.R.ADNA_cf2197af C330255 GBM WGS recurrent_tumor 7316UP-498 7316UP-498.WholeGenome.RP-2158.bam 50663364089 BAM NA 1a97001f-3f96-4ab2-bafd-7f78447b6c12 6b11c21a0d16e74fe97ddd71179977f4 hg19 Recurrent Tumor SM-JU34S sample_tag=ADNA_cf2197af Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C330255.WGS.R C330255 GBM WGS recurrent_tumor 7316UP-498-1105232 7316UP-498-1105232.WholeGenome.RP-2158.bam 74755089697 BAM NA b958b9b4-1eff-4e71-ad0a-4c94548031bd 3577cd298869d9ba1cc20b817d9f6929 hg19 Recurrent Tumor 1105232 C330255.WGS.T C330255 GBM WGS tumor 7316UP-361 7316UP-361.WholeGenome.RP-2158.bam 58000841700 BAM NA c9c95e92-ea1e-4469-b76e-fadaab18848e 95d987bc52732f9878887fe72ceb0c5c hg19 Primary Tumor SM-JU34G C330255.WXS.N C330255 GBM WXS blood_normal 7316UP-361-1105212 7316UP-361-1105212.WholeExome.RP-1303.bam 25256547678 BAM NA 0a15376d-7a40-4bdb-a9b1-df6a0096be32 e8fb639a3aab2e4cad717bd947e4e349 hg19 Blood Derived Normal 1105212 @@ -460,6 +501,7 @@ C383391.WGS.R.ADNA_e70392a0 C383391 GBM WGS recurrent_tumor 7316UP-1581-1105265 C383391.WGS.R.ADNA_f8dd154c C383391 GBM WGS recurrent_tumor 7316UP-1766 7316UP-1766.WholeGenome.RP-2158.bam 57388875090 BAM NA 75d29a76-a9e8-4a57-b231-22c907d64783 f91acf3d6e5fbabf998e426aaae34369 hg19 Recurrent Tumor SM-JU32R sample_tag=ADNA_f8dd154c Duplicate Item: CHOP GBM Triplicate Recurrent Tumor DNA Aliquot C383391.WGS.R.ADNA_f8dd154c C383391 GBM WGS recurrent_tumor 7316UP-1766 7316UP-1766.WholeGenome.RP-2158.bam 57388875090 BAM NA 92903bf8-833a-4614-a6ea-00fcbb929ffd f91acf3d6e5fbabf998e426aaae34369 hg19 Recurrent Tumor SM-JU32R sample_tag=ADNA_f8dd154c Duplicate Item: CHOP GBM Triplicate Recurrent Tumor DNA Aliquot C383391.WGS.R C383391 GBM WGS recurrent_tumor 7316UP-1766-1105264 7316UP-1766-1105264.WholeGenome.RP-2158.bam 56126633437 BAM NA 7894b548-1983-4d54-85b5-1641d3af56d7 c6e855af105c24ad350bddb5a272a24b hg19 Recurrent Tumor 1105264 +C383391.WGS.T.ADNA_4db2e37f C383391 GBM WGS tumor 7316UP-1108 7316UP-1108.WholeGenome.RP-2158.bam 53823725687 BAM NA f06a9ad7-dbaf-432e-bca3-733aa9a56f20 95186712ff2e1473fd0b89c378b46c42 hg19 Primary Tumor SM-JU355 sample_tag=ADNA_4db2e37f Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C383391.WXS.N C383391 GBM WXS blood_normal 7316UP-1108-1105272 7316UP-1108-1105272.WholeExome.RP-1303.bam 24745797287 BAM NA c0487dd4-37f2-4c32-93b6-0d0de66c547a afbd0aeb14c30296d4c6493f14e4b2fb hg19 Blood Derived Normal 1105272 C383391.WXS.R.ADNA_e70392a0 C383391 GBM WXS recurrent_tumor 7316UP-1581-1105265 7316UP-1581-1105265.WholeExome.RP-1303.bam 26619962510 BAM NA 7904fa5e-78b1-420f-bf6a-1c2297bc7895 a6c1f69cfc343d3053d10fb67a4aadcd hg19 Recurrent Tumor 1105265 sample_tag=ADNA_e70392a0 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C383391.WXS.R.ADNA_f8dd154c C383391 GBM WXS recurrent_tumor 7316UP-1766 7316UP-1766.WholeExome.RP-1303.bam 25087107391 BAM NA f63db56a-cf7f-49d6-b7ae-e112a8716197 16a5d8357e4fba2670e3901e3eb08093 hg19 Recurrent Tumor SM-JU32R sample_tag=ADNA_f8dd154c Duplicate Item: CHOP GBM Triplicate Recurrent Tumor DNA Aliquot @@ -2500,12 +2542,12 @@ C3L-00457.RNA-Seq.genomic.Tbm.hg38 C3L-00457 AML RNA-Seq tumor_bone_marrow CPT00 C3L-00457.RNA-Seq.R1.Tbm C3L-00457 AML RNA-Seq tumor_bone_marrow CPT0054830002 171129_UNC32-K00270_0066_AHM25VBBXX_ATCACG_S5_L002_R1_001.fastq.gz 5237946882 FASTQ NA 7fbb57ea-ce5f-460f-926c-bcd3c497d48e a33def0b3a04518a9c29bfa98ba43292 NA Primary Blood Derived Cancer - Bone Marrow C3L-00457-33,C3L-00457-56 C3L-00457.RNA-Seq.R2.Tbm C3L-00457 AML RNA-Seq tumor_bone_marrow CPT0054830002 171129_UNC32-K00270_0066_AHM25VBBXX_ATCACG_S5_L002_R2_001.fastq.gz 5266271358 FASTQ NA c2c12512-899d-403d-8eee-2bb9b031489b 7d0266cc7ee64672f0a6e36841e7aaa7 NA Primary Blood Derived Cancer - Bone Marrow C3L-00457-33,C3L-00457-56 C3L-00457.RNA-Seq.transcriptome.Tbm.hg38 C3L-00457 AML RNA-Seq tumor_bone_marrow CPT0054830002 bce9b61d-29ae-412b-aed2-b7d56e861bb1.rna_seq.transcriptome.gdc_realn.bam 12648983141 BAM transcriptome d519a498-47d6-4c52-b07c-5f69f318653e 4064e15c40fe85930e4a70b5459f65e9 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-00457-33,C3L-00457-56 -C3L-00457.WGS.Nbc.UNK_n6qRDW C3L-00457 AML WGS buccal_normal CPT0054870005 CPT0054870005.WholeGenome.RP-1303.bam 69698611334 BAM NA a0f47869-5aa2-4da5-9de2-acab2d008fc8 f21e42febb1f7c1d4e38b14300683fae hg19 Buccal Cell Normal C3L-00457-51,C3L-00457-52 sample_tag=UNK_n6qRDW Duplicate item: Additional DNA requested -C3L-00457.WGS.Nbc.UNK_n6qRDW.hg38 C3L-00457 AML WGS buccal_normal CPT0054870005 4cfbc7ba-aeed-40f9-bd9e-cb7bdc0f1eea_wgs_gdc_realn.bam 102810790174 BAM NA 4786fe3f-0a54-4f8d-9a37-30116422748d b864745f49c32720ce91774a048ea93c hg38 Buccal Cell Normal C3L-00457-51,C3L-00457-52 sample_tag=UNK_n6qRDW Duplicate item: Additional DNA requested +C3L-00457.WGS.Nbc.ADNA_n6qRDW C3L-00457 AML WGS buccal_normal CPT0054870005 CPT0054870005.WholeGenome.RP-1303.bam 69698611334 BAM NA a0f47869-5aa2-4da5-9de2-acab2d008fc8 f21e42febb1f7c1d4e38b14300683fae hg19 Buccal Cell Normal C3L-00457-51,C3L-00457-52 sample_tag=ADNA_n6qRDW Duplicate item: Additional DNA requested +C3L-00457.WGS.Nbc.ADNA_n6qRDW.hg38 C3L-00457 AML WGS buccal_normal CPT0054870005 4cfbc7ba-aeed-40f9-bd9e-cb7bdc0f1eea_wgs_gdc_realn.bam 102810790174 BAM NA 4786fe3f-0a54-4f8d-9a37-30116422748d b864745f49c32720ce91774a048ea93c hg38 Buccal Cell Normal C3L-00457-51,C3L-00457-52 sample_tag=ADNA_n6qRDW Duplicate item: Additional DNA requested C3L-00457.WGS.Tbm C3L-00457 AML WGS tumor_bone_marrow CPT0054850002 CPT0054850002.WholeGenome.RP-1303.bam 56262061965 BAM NA 86f2966f-8004-4a17-a5c8-acbba5e47bd7 67ce2d33cbc3af62d8c6439564023da8 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-00457-33,C3L-00457-54 C3L-00457.WGS.Tbm.hg38 C3L-00457 AML WGS tumor_bone_marrow CPT0054850002 6a3c7519-742a-4459-9abb-5c9a43c8d3f8_wgs_gdc_realn.bam 82332121109 BAM NA 34d5947e-1b54-49b7-a505-93fe5511f669 671b6e89cb2d352ea4947cb831476c54 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-00457-33,C3L-00457-54 -C3L-00457.WXS.Nbc.UNK_n6qRDW C3L-00457 AML WXS buccal_normal CPT0054870005 CPT0054870005.WholeExome.RP-1303.bam 27023691727 BAM NA 6ffd72f5-aa4a-44c0-a313-d0aa83e41f7a dc44fa1deb68d66fd4f75eb1d219d1ab hg19 Buccal Cell Normal C3L-00457-51,C3L-00457-52 sample_tag=UNK_n6qRDW Duplicate item: Additional DNA requested -C3L-00457.WXS.Nbc.UNK_n6qRDW.hg38 C3L-00457 AML WXS buccal_normal CPT0054870005 4cfbc7ba-aeed-40f9-bd9e-cb7bdc0f1eea_wxs_gdc_realn.bam 36356538540 BAM NA f7352fa2-f8b2-48ff-8e77-a1850206d093 087f9633abb8e9eb8c16e934447631bf hg38 Buccal Cell Normal C3L-00457-51,C3L-00457-52 sample_tag=UNK_n6qRDW Duplicate item: Additional DNA requested +C3L-00457.WXS.Nbc.ADNA_n6qRDW C3L-00457 AML WXS buccal_normal CPT0054870005 CPT0054870005.WholeExome.RP-1303.bam 27023691727 BAM NA 6ffd72f5-aa4a-44c0-a313-d0aa83e41f7a dc44fa1deb68d66fd4f75eb1d219d1ab hg19 Buccal Cell Normal C3L-00457-51,C3L-00457-52 sample_tag=ADNA_n6qRDW Duplicate item: Additional DNA requested +C3L-00457.WXS.Nbc.ADNA_n6qRDW.hg38 C3L-00457 AML WXS buccal_normal CPT0054870005 4cfbc7ba-aeed-40f9-bd9e-cb7bdc0f1eea_wxs_gdc_realn.bam 36356538540 BAM NA f7352fa2-f8b2-48ff-8e77-a1850206d093 087f9633abb8e9eb8c16e934447631bf hg38 Buccal Cell Normal C3L-00457-51,C3L-00457-52 sample_tag=ADNA_n6qRDW Duplicate item: Additional DNA requested C3L-00457.WXS.Tbm C3L-00457 AML WXS tumor_bone_marrow CPT0054850002 CPT0054850002.WholeExome.RP-1303.bam 34186082977 BAM NA f5d8c6aa-ebab-4d81-89ec-82b9621b1d35 288540238740efeb4114faba2b8b6979 hg19 Primary Blood Derived Cancer - Bone Marrow C3L-00457-33,C3L-00457-54 C3L-00457.WXS.Tbm.hg38 C3L-00457 AML WXS tumor_bone_marrow CPT0054850002 6a3c7519-742a-4459-9abb-5c9a43c8d3f8_wxs_gdc_realn.bam 46247539036 BAM NA f92e948a-b6de-4b65-8740-32a0736bb939 639a7e7f7658e71d5219baa30e341067 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-00457-33,C3L-00457-54 C3L-00458.MethArray.Green.Tbm C3L-00458 AML Methylation Array tumor_bone_marrow CPT0054750002 202176290087_R08C01_Grn.idat 13676216 IDAT Green 10e504d1-a2ba-447b-8ddd-7b3c8149ebbe 3619538e1cfd65c627b6e683c3dda8ae NA Primary Blood Derived Cancer - Bone Marrow C3L-00458-54 @@ -2563,12 +2605,12 @@ C3L-00461.MethArray.Green.Tbm C3L-00461 AML Methylation Array tumor_bone_marrow C3L-00461.MethArray.Red.Tbm C3L-00461 AML Methylation Array tumor_bone_marrow CPT0054280002 202234380017_R03C01_Red.idat 13676231 IDAT Red accde596-435d-4897-bc37-00d41910308c 393a61d318e18c0046b7a44824f921dc NA Primary Blood Derived Cancer - Bone Marrow C3L-00461-34,C3L-00461-54 C3L-00461.miRNA-Seq.Tbm C3L-00461 AML miRNA-Seq tumor_bone_marrow CPT0018430002 180724_UNC32-K00270_0106_BHWK3MBBXX_TCGGCA_S23_L007_R1_001.unaln.bam 216191451 BAM NA c31cc2f3-2aca-4e22-9684-01717cfef908 e149c178af8ca7887393e9bdb2348f5e NA Primary Blood Derived Cancer - Bone Marrow C3L-00461-34,C3L-00461-56 C3L-00461.miRNA-Seq.Tbm.hg38 C3L-00461 AML miRNA-Seq tumor_bone_marrow CPT0018430002 ed2d3dba-77a9-4063-9210-7ccd3bd58c09_mirnaseq_gdc_realn.bam 224008004 BAM NA e3d80b94-530b-479b-8381-b1bea3569618 874ed830aeed3bedde5eb8084370c980 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-00461-34,C3L-00461-56 -C3L-00461.WGS.Nbc.UNK_n6PVk5 C3L-00461 AML WGS buccal_normal CPT0054300005 CPT0054300005.WholeGenome.RP-1303.bam 66376106285 BAM NA 36c2788d-a5c2-49fb-a0d4-2f16d55df5a5 8bf4427d1e15a067bea2419377289ea8 hg19 Buccal Cell Normal C3L-00461-52,C3L-00461-53 sample_tag=UNK_n6PVk5 Duplicate item: Additional DNA requested -C3L-00461.WGS.Nbc.UNK_n6PVk5.hg38 C3L-00461 AML WGS buccal_normal CPT0054300005 576f9144-e4c0-4138-8b3c-a0e9dc35b87b_wgs_gdc_realn.bam 107116441783 BAM NA fd05b6b1-0ac6-4bf9-8489-4a6590c46cb5 a97dd43c0b926d9009f4fc4847b52071 hg38 Buccal Cell Normal C3L-00461-52,C3L-00461-53 sample_tag=UNK_n6PVk5 Duplicate item: Additional DNA requested +C3L-00461.WGS.Nbc.ADNA_n6PVk5 C3L-00461 AML WGS buccal_normal CPT0054300005 CPT0054300005.WholeGenome.RP-1303.bam 66376106285 BAM NA 36c2788d-a5c2-49fb-a0d4-2f16d55df5a5 8bf4427d1e15a067bea2419377289ea8 hg19 Buccal Cell Normal C3L-00461-52,C3L-00461-53 sample_tag=ADNA_n6PVk5 Duplicate item: Additional DNA requested +C3L-00461.WGS.Nbc.ADNA_n6PVk5.hg38 C3L-00461 AML WGS buccal_normal CPT0054300005 576f9144-e4c0-4138-8b3c-a0e9dc35b87b_wgs_gdc_realn.bam 107116441783 BAM NA fd05b6b1-0ac6-4bf9-8489-4a6590c46cb5 a97dd43c0b926d9009f4fc4847b52071 hg38 Buccal Cell Normal C3L-00461-52,C3L-00461-53 sample_tag=ADNA_n6PVk5 Duplicate item: Additional DNA requested C3L-00461.WGS.Tbm C3L-00461 AML WGS tumor_bone_marrow CPT0054280002 CPT0054280002.WholeGenome.RP-1303.bam 67791828203 BAM NA 059b3518-b86e-447c-8af6-4217dbdf9462 409b31fafa0e434d9b639912550ba8ca hg19 Primary Blood Derived Cancer - Bone Marrow C3L-00461-34,C3L-00461-54 C3L-00461.WGS.Tbm.hg38 C3L-00461 AML WGS tumor_bone_marrow CPT0054280002 b29cabaf-9072-4b83-ac90-f8507e088796_wgs_gdc_realn.bam 99882759725 BAM NA db50286b-5a53-4a87-90a5-d4d825b89908 bde4180f68d04b7c54762d8ffacebb5b hg38 Primary Blood Derived Cancer - Bone Marrow C3L-00461-34,C3L-00461-54 -C3L-00461.WXS.Nbc.UNK_n6PVk5 C3L-00461 AML WXS buccal_normal CPT0054300005 CPT0054300005.WholeExome.RP-1303.bam 42192603154 BAM NA 574c9ffc-0c42-45f6-98b9-0f7555d0eba9 6b494fc6bd3a8dfcf3e9195b95d1f65b hg19 Buccal Cell Normal C3L-00461-52,C3L-00461-53 sample_tag=UNK_n6PVk5 Duplicate item: Additional DNA requested -C3L-00461.WXS.Nbc.UNK_n6PVk5.hg38 C3L-00461 AML WXS buccal_normal CPT0054300005 576f9144-e4c0-4138-8b3c-a0e9dc35b87b_wxs_gdc_realn.bam 57883503780 BAM NA bc5676e8-5b55-4959-b3e1-ed55610fd3f7 6eac084253a115cb998030053ea7d715 hg38 Buccal Cell Normal C3L-00461-52,C3L-00461-53 sample_tag=UNK_n6PVk5 Duplicate item: Additional DNA requested +C3L-00461.WXS.Nbc.ADNA_n6PVk5 C3L-00461 AML WXS buccal_normal CPT0054300005 CPT0054300005.WholeExome.RP-1303.bam 42192603154 BAM NA 574c9ffc-0c42-45f6-98b9-0f7555d0eba9 6b494fc6bd3a8dfcf3e9195b95d1f65b hg19 Buccal Cell Normal C3L-00461-52,C3L-00461-53 sample_tag=ADNA_n6PVk5 Duplicate item: Additional DNA requested +C3L-00461.WXS.Nbc.ADNA_n6PVk5.hg38 C3L-00461 AML WXS buccal_normal CPT0054300005 576f9144-e4c0-4138-8b3c-a0e9dc35b87b_wxs_gdc_realn.bam 57883503780 BAM NA bc5676e8-5b55-4959-b3e1-ed55610fd3f7 6eac084253a115cb998030053ea7d715 hg38 Buccal Cell Normal C3L-00461-52,C3L-00461-53 sample_tag=ADNA_n6PVk5 Duplicate item: Additional DNA requested C3L-00461.WXS.Tbm C3L-00461 AML WXS tumor_bone_marrow CPT0054280002 CPT0054280002.WholeExome.RP-1303.bam 32968059012 BAM NA e5172578-a4bf-4d8c-ad2c-7138e373ca00 adad845b22cdb0fa1ebd4a0795833edb hg19 Primary Blood Derived Cancer - Bone Marrow C3L-00461-34,C3L-00461-54 C3L-00461.WXS.Tbm.hg38 C3L-00461 AML WXS tumor_bone_marrow CPT0054280002 b29cabaf-9072-4b83-ac90-f8507e088796_wxs_gdc_realn.bam 44943072114 BAM NA 6e0d1eac-125f-4681-b45d-726b67b3bce2 1e88739ee7e6495eccee4f6122942f91 hg38 Primary Blood Derived Cancer - Bone Marrow C3L-00461-34,C3L-00461-54 C3L-00465.MethArray.Green.Tbm C3L-00465 AML Methylation Array tumor_bone_marrow CPT0055020002 202178770045_R07C01_Grn.idat 13676241 IDAT Green d09228fb-fceb-43c7-a773-5e31c0b61b85 20f4f9be41897fbf933cc89ce7190956 NA Primary Blood Derived Cancer - Bone Marrow C3L-00465-54 @@ -6389,9 +6431,9 @@ C3L-01284.WXS.N.hg38 C3L-01284 UCEC WXS blood_normal CPT0080140002 3d32ea57-7403 C3L-01284.WXS.T C3L-01284 UCEC WXS tumor CPT0079570009 CPT0079570009.WholeExome.RP-1303.bam 31950310271 BAM NA b360a00e-03b6-4536-96f8-1720130cc83b dc8e4038a47bdb78214ad08561ea74e7 hg19 Primary Tumor C3L-01284-02 C3L-01284.WXS.T.hg38 C3L-01284 UCEC WXS tumor CPT0079570009 f36e8c4a-0fc4-4b27-9629-d4838f7ba815_gdc_realn.bam 43317132193 BAM NA c5047b0d-9e91-41d3-bef5-ba35d086456d e6377a02e834af27ad4184e96fa63719 hg38 Primary Tumor C3L-01284-02 C3L-01285.MethArray.Green.A C3L-01285 LSCC Methylation Array tissue_normal CPT0087210006 203219670106_R02C01_Grn.idat 13676241 IDAT Green 484d19ae-e7cf-4748-a344-c3fe37f5a647 9929bc792e4080d37c3fb66079cac973 NA Solid Tissue Normal C3L-01285-06 -C3L-01285.MethArray.Green.T.UNK_roMl92 C3L-01285 LSCC Methylation Array tumor CPT0087190009 203219720203_R06C01_Grn.idat 13676221 IDAT Green 22ed4990-0f17-4b9b-85fe-1058026ad5c7 7658406412d9bf25d3fdb12d0ce8cd47 NA Primary Tumor C3L-01285-02 sample_tag=UNK_roMl92 Duplicate item: Additional DNA requested +C3L-01285.MethArray.Green.T.ADNA_roMl92 C3L-01285 LSCC Methylation Array tumor CPT0087190009 203219720203_R06C01_Grn.idat 13676221 IDAT Green 22ed4990-0f17-4b9b-85fe-1058026ad5c7 7658406412d9bf25d3fdb12d0ce8cd47 NA Primary Tumor C3L-01285-02 sample_tag=ADNA_roMl92 Duplicate item: Additional DNA requested C3L-01285.MethArray.Red.A C3L-01285 LSCC Methylation Array tissue_normal CPT0087210006 203219670106_R02C01_Red.idat 13676241 IDAT Red ad8b17b9-ed6e-4faa-90de-499605c390ee 371a6f8c68d882e59c4e38b4a86ba493 NA Solid Tissue Normal C3L-01285-06 -C3L-01285.MethArray.Red.T.UNK_roMl92 C3L-01285 LSCC Methylation Array tumor CPT0087190009 203219720203_R06C01_Red.idat 13676221 IDAT Red f3861979-fe9e-4ff2-892a-192fc5fdb2f9 21a8f7d1f8bb8311651d9b9a71657157 NA Primary Tumor C3L-01285-02 sample_tag=UNK_roMl92 Duplicate item: Additional DNA requested +C3L-01285.MethArray.Red.T.ADNA_roMl92 C3L-01285 LSCC Methylation Array tumor CPT0087190009 203219720203_R06C01_Red.idat 13676221 IDAT Red f3861979-fe9e-4ff2-892a-192fc5fdb2f9 21a8f7d1f8bb8311651d9b9a71657157 NA Primary Tumor C3L-01285-02 sample_tag=ADNA_roMl92 Duplicate item: Additional DNA requested C3L-01285.miRNA-Seq.A C3L-01285 LSCC miRNA-Seq tissue_normal CPT0087210009 181113_UNC31-K00269_0164_AH23NNBBXY_GTGGCC_S44_L006_R1_001.unaln.bam 234051497 BAM NA c04dd017-f07b-4d8b-b0e9-bf4e614c7ed9 9d7a002f3164bcf65b9690818a647f6a NA Solid Tissue Normal C3L-01285-06 C3L-01285.miRNA-Seq.A.hg38 C3L-01285 LSCC miRNA-Seq tissue_normal CPT0087210009 ba7e3a8d-cdfe-4931-94bb-c511097ad500_mirnaseq_gdc_realn.bam 263692028 BAM NA 58f9f58d-8859-4ee0-9295-a2042a127f1c 1865177a46e1aaa2757d64d373062789 hg38 Solid Tissue Normal C3L-01285-06 C3L-01285.miRNA-Seq.T C3L-01285 LSCC miRNA-Seq tumor CPT0087190006 180724_UNC32-K00270_0106_BHWK3MBBXX_CCGTCC_S38_L008_R1_001.unaln.bam 225495030 BAM NA 2cd86fa8-c2ec-4f82-b51a-bf56525aaff9 4ef2d6f6589fdff19f8e29bab3780628 NA Primary Tumor C3L-01285-02 @@ -6410,14 +6452,14 @@ C3L-01285.WGS.A C3L-01285 LSCC WGS tissue_normal CPT0087210006 CPT0087210006.Who C3L-01285.WGS.A.hg38 C3L-01285 LSCC WGS tissue_normal CPT0087210006 68478f98-036d-4812-9b6d-a8a850925cb3_wgs_gdc_realn.bam 87580693686 BAM NA 8cb38e1a-2a6d-43f1-92d4-0f101237408f 1c9aaad48bc05e706216bf202d4aadc2 hg38 Solid Tissue Normal C3L-01285-06 C3L-01285.WGS.N C3L-01285 LSCC WGS blood_normal CPT0087480002 CPT0087480002.WholeGenome.RP-1303.bam 68319294486 BAM NA 05bc5d98-4031-43df-b125-c3d66da4c6de e172062cb9d41b3305212cad9af17ce1 hg19 Blood Derived Normal C3L-01285-31 C3L-01285.WGS.N.hg38 C3L-01285 LSCC WGS blood_normal CPT0087480002 e704b262-5c0a-46f1-bdb2-463b4fe83c1a_wgs_gdc_realn.bam 100210891212 BAM NA f52e8430-6879-4a01-b417-9f9221970f98 05d2d3adb5691e5c9a6cd5bcfe486307 hg38 Blood Derived Normal C3L-01285-31 -C3L-01285.WGS.T.UNK_roMl92 C3L-01285 LSCC WGS tumor CPT0087190009 CPT0087190009.WholeGenome.RP-1303.bam 56749005869 BAM NA e3ce3d5c-db6b-4b43-9de6-f5dd8f63b249 754a03006cecd35177cf7c2e35967cc2 hg19 Primary Tumor C3L-01285-02 sample_tag=UNK_roMl92 Duplicate item: Additional DNA requested -C3L-01285.WGS.T.UNK_roMl92.hg38 C3L-01285 LSCC WGS tumor CPT0087190009 09f170eb-d0fd-4f2c-818f-20bdfa042fb6_wgs_gdc_realn.bam 83723210431 BAM NA 86676d44-42fe-4224-b835-65d8597dd17f c6f05f99b444e512814ce0ffad402391 hg38 Primary Tumor C3L-01285-02 sample_tag=UNK_roMl92 Duplicate item: Additional DNA requested +C3L-01285.WGS.T.ADNA_roMl92 C3L-01285 LSCC WGS tumor CPT0087190009 CPT0087190009.WholeGenome.RP-1303.bam 56749005869 BAM NA e3ce3d5c-db6b-4b43-9de6-f5dd8f63b249 754a03006cecd35177cf7c2e35967cc2 hg19 Primary Tumor C3L-01285-02 sample_tag=ADNA_roMl92 Duplicate item: Additional DNA requested +C3L-01285.WGS.T.ADNA_roMl92.hg38 C3L-01285 LSCC WGS tumor CPT0087190009 09f170eb-d0fd-4f2c-818f-20bdfa042fb6_wgs_gdc_realn.bam 83723210431 BAM NA 86676d44-42fe-4224-b835-65d8597dd17f c6f05f99b444e512814ce0ffad402391 hg38 Primary Tumor C3L-01285-02 sample_tag=ADNA_roMl92 Duplicate item: Additional DNA requested C3L-01285.WXS.A C3L-01285 LSCC WXS tissue_normal CPT0087210006 CPT0087210006.WholeExome.RP-1303.bam 37894290150 BAM NA 0963b06c-23c2-4249-9bdf-40d806fd19e9 d85c4ed1c1383785d516c4350b163045 hg19 Solid Tissue Normal C3L-01285-06 C3L-01285.WXS.A.hg38 C3L-01285 LSCC WXS tissue_normal CPT0087210006 68478f98-036d-4812-9b6d-a8a850925cb3_wxs_gdc_realn.bam 49934861081 BAM NA 84c740d9-f1dc-4b7d-91a1-010e2aa16846 e40f3cdee528e612cc1cbaf8c6b29f0b hg38 Solid Tissue Normal C3L-01285-06 C3L-01285.WXS.N C3L-01285 LSCC WXS blood_normal CPT0087480002 CPT0087480002.WholeExome.RP-1303.bam 27836285935 BAM NA 795cbd55-5fda-4e77-8702-d3920da20c1d b33bab09f4e0dc17390fa112eceb5f51 hg19 Blood Derived Normal C3L-01285-31 C3L-01285.WXS.N.hg38 C3L-01285 LSCC WXS blood_normal CPT0087480002 e704b262-5c0a-46f1-bdb2-463b4fe83c1a_wxs_gdc_realn.bam 38641817752 BAM NA 425b6b9a-af16-45d3-995d-790e291ca478 4a9d765443cf73073029e5f7d8a9d2a6 hg38 Blood Derived Normal C3L-01285-31 -C3L-01285.WXS.T.UNK_roMl92 C3L-01285 LSCC WXS tumor CPT0087190009 CPT0087190009.WholeExome.RP-1303.bam 31154542517 BAM NA 9d8fdc95-e214-4ede-8da1-f4785ee6ec91 8ba4ff6a3c7e9b568ee41d000bd7310a hg19 Primary Tumor C3L-01285-02 sample_tag=UNK_roMl92 Duplicate item: Additional DNA requested -C3L-01285.WXS.T.UNK_roMl92.hg38 C3L-01285 LSCC WXS tumor CPT0087190009 09f170eb-d0fd-4f2c-818f-20bdfa042fb6_wxs_gdc_realn.bam 42998316223 BAM NA 6d6e2b9d-4d1c-42b4-a6cb-756b8d0ca803 be5dc34c60fce9b5e95de68c3136e91f hg38 Primary Tumor C3L-01285-02 sample_tag=UNK_roMl92 Duplicate item: Additional DNA requested +C3L-01285.WXS.T.ADNA_roMl92 C3L-01285 LSCC WXS tumor CPT0087190009 CPT0087190009.WholeExome.RP-1303.bam 31154542517 BAM NA 9d8fdc95-e214-4ede-8da1-f4785ee6ec91 8ba4ff6a3c7e9b568ee41d000bd7310a hg19 Primary Tumor C3L-01285-02 sample_tag=ADNA_roMl92 Duplicate item: Additional DNA requested +C3L-01285.WXS.T.ADNA_roMl92.hg38 C3L-01285 LSCC WXS tumor CPT0087190009 09f170eb-d0fd-4f2c-818f-20bdfa042fb6_wxs_gdc_realn.bam 42998316223 BAM NA 6d6e2b9d-4d1c-42b4-a6cb-756b8d0ca803 be5dc34c60fce9b5e95de68c3136e91f hg38 Primary Tumor C3L-01285-02 sample_tag=ADNA_roMl92 Duplicate item: Additional DNA requested C3L-01286.MethArray.Green.A C3L-01286 CCRCC Methylation Array tissue_normal CPT0086970009 203027390029_R08C01_Grn.idat 13676246 IDAT Green df2ff300-0973-4f0d-a656-9e7b855d5186 64f4d08a6330af43260e99f87aa4a2fc NA Solid Tissue Normal C3L-01286-06 C3L-01286.MethArray.Green.T C3L-01286 CCRCC Methylation Array tumor CPT0086950009 202176300001_R08C01_Grn.idat 13676216 IDAT Green 0a817c99-ca6f-4012-9afa-f115ff0859e4 71f5e7158c7d9c2d63769e54a60cba16 NA Primary Tumor C3L-01286-02 C3L-01286.MethArray.Green.T.HET_roYL7L C3L-01286 CCRCC Methylation Array tumor CPT0086960009 204372030085_R01C01_Grn.idat 13677880 IDAT Green 58be5587-c8b0-4d17-9b24-14151a8f1678 754c0ead494da4e11eec0e2a65c02e6a NA Primary Tumor C3L-01286-03 sample_tag=HET_roYL7L Duplicate item: CCRCC Tumor heterogeneity study aliquot @@ -8139,8 +8181,8 @@ C3L-01833.WXS.N C3L-01833 UCEC WXS blood_normal CPT0100050002 CPT0100050002.Whol C3L-01833.WXS.N.hg38 C3L-01833 UCEC WXS blood_normal CPT0100050002 82cd6dc4-3a55-4dda-bead-8ad25b691833_wxs_gdc_realn.bam 59479282409 BAM NA ac95ef0d-244f-4321-b071-e9cc28f73bde 6a3e28368ca67035aacd50a34a04c76e hg38 Blood Derived Normal C3L-01833-32,C3L-01833-71 C3L-01833.WXS.T C3L-01833 UCEC WXS tumor CPT0100010009 CPT0100010009.WholeExome.RP-1303.bam 42621531080 BAM NA 7b8b5412-c020-4abd-a1f1-99bb4faec5c7 9496331af01461ff265f5b8a253ced64 hg19 Primary Tumor C3L-01833-01 C3L-01833.WXS.T.hg38 C3L-01833 UCEC WXS tumor CPT0100010009 e1bf75ae-709e-484b-b4d7-2d589861b32c_wxs_gdc_realn.bam 57838495653 BAM NA 3b7748e1-6351-471b-aca7-0f34d5e5dbc6 f6ba992ecbf516ad7cecfa5de67a8aeb hg38 Primary Tumor C3L-01833-01 -C3L-01834.MethArray.Green.T.UNK_vyGzBM C3L-01834 GBM Methylation Array tumor CPT0104220010 203027390049_R05C01_Grn.idat 13676235 IDAT Green a72dcd64-cc36-494c-9e15-21061834ab9d 1736dee091a53c995f1ea0588109103b NA Primary Tumor C3L-01834-02 sample_tag=UNK_vyGzBM Duplicate item: Additional DNA requested -C3L-01834.MethArray.Red.T.UNK_vyGzBM C3L-01834 GBM Methylation Array tumor CPT0104220010 203027390049_R05C01_Red.idat 13676235 IDAT Red b70aedb4-4609-4fd4-9088-7bb8fa2319e6 0fec5faba0e5b4cd2fdcc721181e14dc NA Primary Tumor C3L-01834-02 sample_tag=UNK_vyGzBM Duplicate item: Additional DNA requested +C3L-01834.MethArray.Green.T.ADNA_vyGzBM C3L-01834 GBM Methylation Array tumor CPT0104220010 203027390049_R05C01_Grn.idat 13676235 IDAT Green a72dcd64-cc36-494c-9e15-21061834ab9d 1736dee091a53c995f1ea0588109103b NA Primary Tumor C3L-01834-02 sample_tag=ADNA_vyGzBM Duplicate item: Additional DNA requested +C3L-01834.MethArray.Red.T.ADNA_vyGzBM C3L-01834 GBM Methylation Array tumor CPT0104220010 203027390049_R05C01_Red.idat 13676235 IDAT Red b70aedb4-4609-4fd4-9088-7bb8fa2319e6 0fec5faba0e5b4cd2fdcc721181e14dc NA Primary Tumor C3L-01834-02 sample_tag=ADNA_vyGzBM Duplicate item: Additional DNA requested C3L-01834.miRNA-Seq.T C3L-01834 GBM miRNA-Seq tumor CPT0104220005 181108_UNC31-K00269_0162_AH255GBBXY_CGATGT_S26_L004_R1_001.unaln.bam 284212433 BAM NA 8fb02a71-c6db-4a66-b59b-d7003c8811bb 6b6b19fa0a38a3e0838f5eb9a2a3cfcd NA Primary Tumor C3L-01834-02 C3L-01834.miRNA-Seq.T.hg38 C3L-01834 GBM miRNA-Seq tumor CPT0104220005 64ad87dc-140c-4030-a5b6-eda1a9946f2f_mirnaseq_gdc_realn.bam 317703220 BAM NA fda976ec-7f45-426b-9846-274b67db15e0 839e19cde7f656fd5523460555afb52f hg38 Primary Tumor C3L-01834-02 C3L-01834.RNA-Seq.chimeric.T.hg38 C3L-01834 GBM RNA-Seq tumor CPT0104220005 574d58f5-dfcd-470d-a8fd-bf43b2996401.rna_seq.chimeric.gdc_realn.bam 107259703 BAM chimeric 98ffd472-6c70-461f-9998-b921d4107960 5fd75cc49d54c034c5ad146bb7195c61 hg38 Primary Tumor C3L-01834-02 @@ -8152,8 +8194,8 @@ C3L-01834.WGS.N C3L-01834 GBM WGS blood_normal CPT0105090002 CPT0105090002.Whole C3L-01834.WGS.N.hg38 C3L-01834 GBM WGS blood_normal CPT0105090002 7bd95971-f2a9-4d31-beb1-cb3aa2d72fb5_wgs_gdc_realn.bam 85614011228 BAM NA 758f901a-f6be-4f59-bc5d-50185c78a336 fd09145a1ed87d8e44b4d6334ab4a88c hg38 Blood Derived Normal C3L-01834-31 C3L-01834.WXS.N C3L-01834 GBM WXS blood_normal CPT0105090002 CPT0105090002.WholeExome.RP-1303.bam 34684127259 BAM NA 9844e3be-cc8e-4838-91a7-c7792ae4970d 18fed23c3f06c32eaafd90dfcc8b47fc hg19 Blood Derived Normal C3L-01834-31 C3L-01834.WXS.N.hg38 C3L-01834 GBM WXS blood_normal CPT0105090002 7bd95971-f2a9-4d31-beb1-cb3aa2d72fb5_wxs_gdc_realn.bam 47769398348 BAM NA 2ce1baf3-67b6-4de5-bb81-51f89abbf1c6 9081d6e991c74b4121072a467b279d89 hg38 Blood Derived Normal C3L-01834-31 -C3L-01834.WXS.T.UNK_vyGzBM C3L-01834 GBM WXS tumor CPT0104220010 CPT0104220010.WholeExome.RP-1303.bam 22939639897 BAM NA bd78ec3d-c033-4257-b250-2b90eeea5bca 9173bbf5b04c6e1d72559c968f06ac08 hg19 Primary Tumor C3L-01834-02 sample_tag=UNK_vyGzBM Duplicate item: Additional DNA requested -C3L-01834.WXS.T.UNK_vyGzBM.hg38 C3L-01834 GBM WXS tumor CPT0104220010 c0308317-bfca-4564-bc9a-9e31ec5b1336_wxs_gdc_realn.bam 31018736739 BAM NA 18d26f34-47b9-4b58-81da-48f777001d49 607ea328e3a892bd3a0217d691cf9e35 hg38 Primary Tumor C3L-01834-02 sample_tag=UNK_vyGzBM Duplicate item: Additional DNA requested +C3L-01834.WXS.T.ADNA_vyGzBM C3L-01834 GBM WXS tumor CPT0104220010 CPT0104220010.WholeExome.RP-1303.bam 22939639897 BAM NA bd78ec3d-c033-4257-b250-2b90eeea5bca 9173bbf5b04c6e1d72559c968f06ac08 hg19 Primary Tumor C3L-01834-02 sample_tag=ADNA_vyGzBM Duplicate item: Additional DNA requested +C3L-01834.WXS.T.ADNA_vyGzBM.hg38 C3L-01834 GBM WXS tumor CPT0104220010 c0308317-bfca-4564-bc9a-9e31ec5b1336_wxs_gdc_realn.bam 31018736739 BAM NA 18d26f34-47b9-4b58-81da-48f777001d49 607ea328e3a892bd3a0217d691cf9e35 hg38 Primary Tumor C3L-01834-02 sample_tag=ADNA_vyGzBM Duplicate item: Additional DNA requested C3L-01836.MethArray.Green.A C3L-01836 CCRCC Methylation Array tissue_normal CPT0086890009 203027390029_R04C01_Grn.idat 13676246 IDAT Green 78fb1b7a-7014-4667-90f1-8955462cbf39 0d4673d1e154b891a3c0d446095bd0de NA Solid Tissue Normal C3L-01836-06 C3L-01836.MethArray.Green.T C3L-01836 CCRCC Methylation Array tumor CPT0086870009 202184900127_R04C01_Grn.idat 13676246 IDAT Green 0fc6c07f-eaec-44a6-bf1a-935915738899 2db1ccec5f2d3df09e51d561b7a3d8ee NA Primary Tumor C3L-01836-02 C3L-01836.MethArray.Green.T.HET_ro9412 C3L-01836 CCRCC Methylation Array tumor CPT0086860009 204372030074_R04C01_Grn.idat 13677880 IDAT Green 0ffe1538-3497-4520-93ca-12ac44151a15 d615c52d695266737cdeea8f9b103b04 NA Primary Tumor C3L-01836-01 sample_tag=HET_ro9412 Duplicate item: CCRCC Tumor heterogeneity study aliquot @@ -8321,8 +8363,8 @@ C3L-01862.WXS.N C3L-01862 LUAD WXS blood_normal CPT0093710002 CPT0093710002.Whol C3L-01862.WXS.N.hg38 C3L-01862 LUAD WXS blood_normal CPT0093710002 57736f53-612c-4e10-a5f2-2bb931276189_wxs_gdc_realn.bam 46554500635 BAM NA de85bf55-9dcb-4a92-b85b-218d58916de2 23cdbaedfe721c0f47512808fb4e2b47 hg38 Blood Derived Normal C3L-01862-31 C3L-01862.WXS.T C3L-01862 LUAD WXS tumor CPT0092530009 CPT0092530009.WholeExome.RP-1303.bam 28515107949 BAM NA 7d3f7e24-3283-46f4-8c3b-7f885c74d3cc 3aee21b99ea46c66fd864ade7986f007 hg19 Primary Tumor C3L-01862-01 C3L-01862.WXS.T.hg38 C3L-01862 LUAD WXS tumor CPT0092530009 fb3d8bc7-276c-4e3d-a25d-f45f8cacb57d_wxs_gdc_realn.bam 38665774426 BAM NA 181112d7-77a9-4439-b080-af2cdad07dd1 72dee14d942d453eb123b506bcacec0d hg38 Primary Tumor C3L-01862-01 -C3L-01864.MethArray.Green.T.UNK_rlO8jw C3L-01864 UCEC Methylation Array tumor CPT0092860009 202234370086_R01C01_Grn.idat 13676231 IDAT Green 9053923b-97db-47b6-a689-68dcd46935e5 e7fe1190d307dfe9a39a1ae706669d20 NA Primary Tumor C3L-01864-02 sample_tag=UNK_rlO8jw Duplicate item: Additional DNA requested -C3L-01864.MethArray.Red.T.UNK_rlO8jw C3L-01864 UCEC Methylation Array tumor CPT0092860009 202234370086_R01C01_Red.idat 13676231 IDAT Red b72a0ee1-7d4f-4a0f-b222-896d4e27c81e aa3d3b9b41517299588021a6a31abcfd NA Primary Tumor C3L-01864-02 sample_tag=UNK_rlO8jw Duplicate item: Additional DNA requested +C3L-01864.MethArray.Green.T.ADNA_rlO8jw C3L-01864 UCEC Methylation Array tumor CPT0092860009 202234370086_R01C01_Grn.idat 13676231 IDAT Green 9053923b-97db-47b6-a689-68dcd46935e5 e7fe1190d307dfe9a39a1ae706669d20 NA Primary Tumor C3L-01864-02 sample_tag=ADNA_rlO8jw Duplicate item: Additional DNA requested +C3L-01864.MethArray.Red.T.ADNA_rlO8jw C3L-01864 UCEC Methylation Array tumor CPT0092860009 202234370086_R01C01_Red.idat 13676231 IDAT Red b72a0ee1-7d4f-4a0f-b222-896d4e27c81e aa3d3b9b41517299588021a6a31abcfd NA Primary Tumor C3L-01864-02 sample_tag=ADNA_rlO8jw Duplicate item: Additional DNA requested C3L-01864.miRNA-Seq.T C3L-01864 UCEC miRNA-Seq tumor CPT0092860006 180724_UNC32-K00270_0106_BHWK3MBBXX_GACGAC_S17_L007_R1_001.unaln.bam 250664341 BAM NA f971a0b1-88cb-41b0-a113-7bac19d2b90e d2660864ede4f24aeddbe03b1d96b2b1 NA Primary Tumor C3L-01864-02 C3L-01864.miRNA-Seq.T.hg38 C3L-01864 UCEC miRNA-Seq tumor CPT0092860006 da25a4de-2fe7-4937-9172-37a99df7da2f_mirnaseq_gdc_realn.bam 266255007 BAM NA d8ed9995-3186-482b-85c4-3ae4b3f56cf1 2e9dfeaddd49491fb3eb562b67a275de hg38 Primary Tumor C3L-01864-02 C3L-01864.RNA-Seq.chimeric.T.hg38 C3L-01864 UCEC RNA-Seq tumor CPT0092860006 47085edc-7a09-48d5-991f-ea2b711120f9.rna_seq.chimeric.gdc_realn.bam 50349603 BAM chimeric a6a00a35-75e3-477a-8175-aa314ac1d941 1d7f1dbd0ffe22f87f2dbcb4e72de12b hg38 Primary Tumor C3L-01864-02 @@ -8334,12 +8376,12 @@ C3L-01864.RNA-Seq.R2.T C3L-01864 UCEC RNA-Seq tumor CPT0350070001 20210729_P3_A7 C3L-01864.RNA-Seq.transcriptome.T.hg38 C3L-01864 UCEC RNA-Seq tumor CPT0092860006 47085edc-7a09-48d5-991f-ea2b711120f9.rna_seq.transcriptome.gdc_realn.bam 11520689207 BAM transcriptome 61c10e51-7be6-49ce-b16b-f81622585b0d a8a66ffcf404e8a34daf9b161cf2f748 hg38 Primary Tumor C3L-01864-02 C3L-01864.WGS.N C3L-01864 UCEC WGS blood_normal CPT0093840002 CPT0093840002.WholeGenome.RP-1303.bam 61379417141 BAM NA 88ed8c9f-aea6-479b-a9ba-f8904ec7c833 46e843566813fbff4d46d0e0a4a68984 hg19 Blood Derived Normal C3L-01864-31 C3L-01864.WGS.N.hg38 C3L-01864 UCEC WGS blood_normal CPT0093840002 ebcd3c59-6e3a-4913-8bc4-50fe264a0f67_wgs_gdc_realn.bam 89371314010 BAM NA bcbc24e7-469a-41ab-8589-f6481dcd15f6 9c649ac132e23f543b351da4a76c88e2 hg38 Blood Derived Normal C3L-01864-31 -C3L-01864.WGS.T.UNK_rlO8jw C3L-01864 UCEC WGS tumor CPT0092860009 CPT0092860009.WholeGenome.RP-1303.bam 66887616993 BAM NA 1c9ccf54-f825-4b68-ad00-163ac120bdc7 a3f930ecceefabdaa55f1d4315926712 hg19 Primary Tumor C3L-01864-02 sample_tag=UNK_rlO8jw Duplicate item: Additional DNA requested -C3L-01864.WGS.T.UNK_rlO8jw.hg38 C3L-01864 UCEC WGS tumor CPT0092860009 31aa7828-c230-4711-a349-8bf53fd585a3_wgs_gdc_realn.bam 99867810467 BAM NA 4fce4f98-6af5-4951-98ad-86af45cf17ca 51109657b8a39074a5610e79fbb9ddb1 hg38 Primary Tumor C3L-01864-02 sample_tag=UNK_rlO8jw Duplicate item: Additional DNA requested +C3L-01864.WGS.T.ADNA_rlO8jw C3L-01864 UCEC WGS tumor CPT0092860009 CPT0092860009.WholeGenome.RP-1303.bam 66887616993 BAM NA 1c9ccf54-f825-4b68-ad00-163ac120bdc7 a3f930ecceefabdaa55f1d4315926712 hg19 Primary Tumor C3L-01864-02 sample_tag=ADNA_rlO8jw Duplicate item: Additional DNA requested +C3L-01864.WGS.T.ADNA_rlO8jw.hg38 C3L-01864 UCEC WGS tumor CPT0092860009 31aa7828-c230-4711-a349-8bf53fd585a3_wgs_gdc_realn.bam 99867810467 BAM NA 4fce4f98-6af5-4951-98ad-86af45cf17ca 51109657b8a39074a5610e79fbb9ddb1 hg38 Primary Tumor C3L-01864-02 sample_tag=ADNA_rlO8jw Duplicate item: Additional DNA requested C3L-01864.WXS.N C3L-01864 UCEC WXS blood_normal CPT0093840002 CPT0093840002.WholeExome.RP-1303.bam 32526733430 BAM NA d93ada75-e013-4c14-9945-0a8dde071738 09a5b854eeb821aa15211636d5021587 hg19 Blood Derived Normal C3L-01864-31 C3L-01864.WXS.N.hg38 C3L-01864 UCEC WXS blood_normal CPT0093840002 ebcd3c59-6e3a-4913-8bc4-50fe264a0f67_wxs_gdc_realn.bam 44181681486 BAM NA 12f4261d-c0e1-4088-8f69-003acb306e5a 8c8ec4f147d1c4a1648bf011bb3a2d9a hg38 Blood Derived Normal C3L-01864-31 -C3L-01864.WXS.T.UNK_rlO8jw C3L-01864 UCEC WXS tumor CPT0092860009 CPT0092860009.WholeExome.RP-1303.bam 49492814707 BAM NA 06b1e0d9-a81e-4fc8-b99a-f44330cac9e7 42042f257a742cb5d10c5d1c10c7c168 hg19 Primary Tumor C3L-01864-02 sample_tag=UNK_rlO8jw Duplicate item: Additional DNA requested -C3L-01864.WXS.T.UNK_rlO8jw.hg38 C3L-01864 UCEC WXS tumor CPT0092860009 31aa7828-c230-4711-a349-8bf53fd585a3_wxs_gdc_realn.bam 67184302768 BAM NA f931272e-d6b4-4528-9ae0-d0c0b4bf2607 188a5270182a447b69c9b2c7095b843d hg38 Primary Tumor C3L-01864-02 sample_tag=UNK_rlO8jw Duplicate item: Additional DNA requested +C3L-01864.WXS.T.ADNA_rlO8jw C3L-01864 UCEC WXS tumor CPT0092860009 CPT0092860009.WholeExome.RP-1303.bam 49492814707 BAM NA 06b1e0d9-a81e-4fc8-b99a-f44330cac9e7 42042f257a742cb5d10c5d1c10c7c168 hg19 Primary Tumor C3L-01864-02 sample_tag=ADNA_rlO8jw Duplicate item: Additional DNA requested +C3L-01864.WXS.T.ADNA_rlO8jw.hg38 C3L-01864 UCEC WXS tumor CPT0092860009 31aa7828-c230-4711-a349-8bf53fd585a3_wxs_gdc_realn.bam 67184302768 BAM NA f931272e-d6b4-4528-9ae0-d0c0b4bf2607 188a5270182a447b69c9b2c7095b843d hg38 Primary Tumor C3L-01864-02 sample_tag=ADNA_rlO8jw Duplicate item: Additional DNA requested C3L-01865.MethArray.Green.A C3L-01865 CCRCC Methylation Array tissue_normal CPT0392290006 205549610122_R06C01_Grn.idat 13677955 IDAT Green 239350e6-b2c5-4672-8bcb-e13c4e094cd1 5a58e27eed41164e60b443bfcb24226f NA Solid Tissue Normal C3L-01865-06 C3L-01865.MethArray.Green.T C3L-01865 CCRCC Methylation Array tumor CPT0392260006 205589730117_R08C01_Grn.idat 13677955 IDAT Green 01f3f3db-494e-4efa-b2cc-d54399d7fb15 e57e393956a4d5b43d31dfdb93380086 NA Primary Tumor C3L-01865-01 C3L-01865.MethArray.Red.A C3L-01865 CCRCC Methylation Array tissue_normal CPT0392290006 205549610122_R06C01_Red.idat 13677955 IDAT Red a10b3844-4666-4a81-b133-08fbd32ebb60 4ae9ccef39955f6f3eb21ebca2332200 NA Solid Tissue Normal C3L-01865-06 @@ -9473,8 +9515,8 @@ C3L-02170.WXS.N C3L-02170 LSCC WXS blood_normal CPT0175640002 CPT0175640002.Whol C3L-02170.WXS.N.hg38 C3L-02170 LSCC WXS blood_normal CPT0175640002 dd54f8e5-09cc-4925-86e5-797f029e52cb_wxs_gdc_realn.bam 26757263345 BAM NA bbf1978b-1db4-4656-a991-70479d05d1f6 4c3b13d0d7c575ed56f7e586dc5bd580 hg38 Blood Derived Normal C3L-02170-31 C3L-02170.WXS.T C3L-02170 LSCC WXS tumor CPT0175560006 CPT0175560006.WholeExome.RP-1303.bam 29024736524 BAM NA 3c7cc608-1008-47c5-bff2-2b3f81cce2e1 f2ecdde9aa4537c9eda9275b8d6d81a6 hg19 Primary Tumor C3L-02170-03 C3L-02170.WXS.T.hg38 C3L-02170 LSCC WXS tumor CPT0175560006 5222af15-8276-44d6-927e-e46b9d44f28d_wxs_gdc_realn.bam 40442856125 BAM NA 4fd70b41-4cd0-4908-9142-5a155538ff12 c51b14a5303eabbccb20cee25ab634f7 hg38 Primary Tumor C3L-02170-03 -C3L-02175.MethArray.Green.T.UNK_rGO344 C3L-02175 CCRCC Methylation Array tumor CPT0100410009 203219650217_R06C01_Grn.idat 13676216 IDAT Green c73f197d-5d99-493f-adfc-dbea318d2d16 a742c9cea44853f0a60802529202029d NA Primary Tumor C3L-02175-01 sample_tag=UNK_rGO344 Duplicate item: Additional DNA requested -C3L-02175.MethArray.Red.T.UNK_rGO344 C3L-02175 CCRCC Methylation Array tumor CPT0100410009 203219650217_R06C01_Red.idat 13676216 IDAT Red b7bfefdf-b8fc-4145-9e29-9aeebf923c02 f23b16fc12038ed2c4065713c80ffd0b NA Primary Tumor C3L-02175-01 sample_tag=UNK_rGO344 Duplicate item: Additional DNA requested +C3L-02175.MethArray.Green.T.ADNA_rGO344 C3L-02175 CCRCC Methylation Array tumor CPT0100410009 203219650217_R06C01_Grn.idat 13676216 IDAT Green c73f197d-5d99-493f-adfc-dbea318d2d16 a742c9cea44853f0a60802529202029d NA Primary Tumor C3L-02175-01 sample_tag=ADNA_rGO344 Duplicate item: Additional DNA requested +C3L-02175.MethArray.Red.T.ADNA_rGO344 C3L-02175 CCRCC Methylation Array tumor CPT0100410009 203219650217_R06C01_Red.idat 13676216 IDAT Red b7bfefdf-b8fc-4145-9e29-9aeebf923c02 f23b16fc12038ed2c4065713c80ffd0b NA Primary Tumor C3L-02175-01 sample_tag=ADNA_rGO344 Duplicate item: Additional DNA requested C3L-02175.miRNA-Seq.T C3L-02175 CCRCC miRNA-Seq tumor CPT0100410006 180828_UNC32-K00270_0112_AHWTLNBBXX_ACTGAT_S25_L007_R1_001.unaln.bam 342586292 BAM NA 211c7236-a41f-4447-a5bf-b9567bf60077 6737ad8177d768f81ce3df2c97afb267 NA Primary Tumor C3L-02175-01 C3L-02175.miRNA-Seq.T.hg38 C3L-02175 CCRCC miRNA-Seq tumor CPT0100410006 b2cf64ca-e527-4ca1-95be-a369faefa578_mirnaseq_gdc_realn.bam 384369823 BAM NA 29720da5-ae6c-4636-a1e6-ed6e59aa118b 2bc4fc41ac0318013f69c84c0cf2bc87 hg38 Primary Tumor C3L-02175-01 C3L-02175.RNA-Seq.chimeric.T.hg38 C3L-02175 CCRCC RNA-Seq tumor CPT0100410006 8e171396-fc55-4261-89f2-b9268f2c91d3.rna_seq.chimeric.gdc_realn.bam 42539047 BAM chimeric 599c4076-a675-4e8e-a37c-0c45c5240f66 e09b6f4fa38e1ef3dda42f3285f66a82 hg38 Primary Tumor C3L-02175-01 @@ -9484,12 +9526,12 @@ C3L-02175.RNA-Seq.R2.T C3L-02175 CCRCC RNA-Seq tumor CPT0100410006 171129_UNC32- C3L-02175.RNA-Seq.transcriptome.T.hg38 C3L-02175 CCRCC RNA-Seq tumor CPT0100410006 8e171396-fc55-4261-89f2-b9268f2c91d3.rna_seq.transcriptome.gdc_realn.bam 9632835285 BAM transcriptome 1b1371c2-efcf-4f7b-888d-95a3c45cbe07 fe4414c10492326049bf1e6260efe134 hg38 Primary Tumor C3L-02175-01 C3L-02175.WGS.N C3L-02175 CCRCC WGS blood_normal CPT0101930002 CPT0101930002.WholeGenome.RP-1303.bam 66291160337 BAM NA fb934f0d-1915-4149-a67d-0bdd65fa6cb9 6fe20d0bc233be67453ec96e7496e725 hg19 Blood Derived Normal C3L-02175-31 C3L-02175.WGS.N.hg38 C3L-02175 CCRCC WGS blood_normal CPT0101930002 6eadb488-015f-427c-8194-9709dff9facf_wgs_gdc_realn.bam 97648522008 BAM NA 0bff2363-4079-4835-9e0b-b698ece29edc cc0bfa8286f89a57eaa398108812d0cc hg38 Blood Derived Normal C3L-02175-31 -C3L-02175.WGS.T.UNK_rGO344 C3L-02175 CCRCC WGS tumor CPT0100410009 CPT0100410009.WholeGenome.RP-1303.bam 56642132340 BAM NA 490dffaf-67a4-4bfe-82d1-1caf85c4dead 2db3cedb7e7ee031a8a0431f21698df1 hg19 Primary Tumor C3L-02175-01 sample_tag=UNK_rGO344 Duplicate item: Additional DNA requested -C3L-02175.WGS.T.UNK_rGO344.hg38 C3L-02175 CCRCC WGS tumor CPT0100410009 573d770d-55a6-413b-874b-444f2bff1b31_wgs_gdc_realn.bam 83424429662 BAM NA 71aa6238-f9f2-4374-a406-c192e6ed0154 2d000c55fb30017d3083f516535b9c70 hg38 Primary Tumor C3L-02175-01 sample_tag=UNK_rGO344 Duplicate item: Additional DNA requested +C3L-02175.WGS.T.ADNA_rGO344 C3L-02175 CCRCC WGS tumor CPT0100410009 CPT0100410009.WholeGenome.RP-1303.bam 56642132340 BAM NA 490dffaf-67a4-4bfe-82d1-1caf85c4dead 2db3cedb7e7ee031a8a0431f21698df1 hg19 Primary Tumor C3L-02175-01 sample_tag=ADNA_rGO344 Duplicate item: Additional DNA requested +C3L-02175.WGS.T.ADNA_rGO344.hg38 C3L-02175 CCRCC WGS tumor CPT0100410009 573d770d-55a6-413b-874b-444f2bff1b31_wgs_gdc_realn.bam 83424429662 BAM NA 71aa6238-f9f2-4374-a406-c192e6ed0154 2d000c55fb30017d3083f516535b9c70 hg38 Primary Tumor C3L-02175-01 sample_tag=ADNA_rGO344 Duplicate item: Additional DNA requested C3L-02175.WXS.N C3L-02175 CCRCC WXS blood_normal CPT0101930002 CPT0101930002.WholeExome.RP-1303.bam 30616433475 BAM NA d5784d20-2151-473f-8e4c-b7bf553217d3 4d1e45f9e7c6157fcafff0a3ef3b35f1 hg19 Blood Derived Normal C3L-02175-31 C3L-02175.WXS.N.hg38 C3L-02175 CCRCC WXS blood_normal CPT0101930002 6eadb488-015f-427c-8194-9709dff9facf_wxs_gdc_realn.bam 42288858151 BAM NA f6570ece-999f-4dcf-9dbe-253a821240af 1a9135e7ef877997486b1ccc48b8bec1 hg38 Blood Derived Normal C3L-02175-31 -C3L-02175.WXS.T.UNK_rGO344 C3L-02175 CCRCC WXS tumor CPT0100410009 CPT0100410009.WholeExome.RP-1303.bam 33972199619 BAM NA d928773d-767a-46c3-8c6d-bb6f95f4da3f 9fcf4411d17a7118592c2402c0857df7 hg19 Primary Tumor C3L-02175-01 sample_tag=UNK_rGO344 Duplicate item: Additional DNA requested -C3L-02175.WXS.T.UNK_rGO344.hg38 C3L-02175 CCRCC WXS tumor CPT0100410009 573d770d-55a6-413b-874b-444f2bff1b31_wxs_gdc_realn.bam 47301558950 BAM NA 3e4b4d1b-be24-459c-8fcf-1e464a8912df d07d5032e89fa2ba0e5d959fad934ef2 hg38 Primary Tumor C3L-02175-01 sample_tag=UNK_rGO344 Duplicate item: Additional DNA requested +C3L-02175.WXS.T.ADNA_rGO344 C3L-02175 CCRCC WXS tumor CPT0100410009 CPT0100410009.WholeExome.RP-1303.bam 33972199619 BAM NA d928773d-767a-46c3-8c6d-bb6f95f4da3f 9fcf4411d17a7118592c2402c0857df7 hg19 Primary Tumor C3L-02175-01 sample_tag=ADNA_rGO344 Duplicate item: Additional DNA requested +C3L-02175.WXS.T.ADNA_rGO344.hg38 C3L-02175 CCRCC WXS tumor CPT0100410009 573d770d-55a6-413b-874b-444f2bff1b31_wxs_gdc_realn.bam 47301558950 BAM NA 3e4b4d1b-be24-459c-8fcf-1e464a8912df d07d5032e89fa2ba0e5d959fad934ef2 hg38 Primary Tumor C3L-02175-01 sample_tag=ADNA_rGO344 Duplicate item: Additional DNA requested C3L-02176.MethArray.Green.T C3L-02176 CCRCC Methylation Array tumor CPT0100470008 202234380054_R06C01_Grn.idat 13676231 IDAT Green f9d464ef-b36a-445e-b213-fe57694e7402 d651258b3eba58c29159d45008ed2490 NA Primary Tumor C3L-02176-01 C3L-02176.MethArray.Red.T C3L-02176 CCRCC Methylation Array tumor CPT0100470008 202234380054_R06C01_Red.idat 13676231 IDAT Red cc4a846f-04a4-444b-9cae-bb1be625df4a e1c577bfeda95a839efbcd5a6ac6a2ea NA Primary Tumor C3L-02176-01 C3L-02176.miRNA-Seq.T C3L-02176 CCRCC miRNA-Seq tumor CPT0100470006 181113_UNC31-K00269_0164_AH23NNBBXY_CTATAC_S15_L003_R1_001.unaln.bam 214036121 BAM NA 684b9f05-6909-4722-b949-311d3181b02b a47ce2109376b9d19ae2e0c6c215912c NA Primary Tumor C3L-02176-01 @@ -11807,7 +11849,7 @@ C3L-02705.RNA-Seq.R2.T C3L-02705 GBM RNA-Seq tumor CPT0189650010 181218_UNC32-K0 C3L-02705.RNA-Seq.transcriptome.T.hg38 C3L-02705 GBM RNA-Seq tumor CPT0189650010 cb6d1cb9-0b4b-4938-902b-39d02b07faf7.rna_seq.transcriptome.gdc_realn.bam 8175750568 BAM transcriptome 9cb576c9-3a85-476a-966b-04c5cd655d6c dfc1b932382d6bccec2b558d005d51e7 hg38 Primary Tumor C3L-02705-71,C3L-02705-72,C3L-02705-75 C3L-02705.scRNA-Seq.R1.T C3L-02705 GBM scRNA-Seq tumor CPT0189650015 20200616_WUSTL_CPT0189650015_CGTTAATC-GCCACGCT-TTACTCAG-AAGGGTGA_S3_L003_R1_001.fastq.gz 10955017630 FASTQ NA 1f4d56f2-61d3-4c05-a994-a1db1fdc5323 d9e00f0c966dd4c2969aa4defa82b200 NA Primary Tumor C3L-02705-71 C3L-02705.scRNA-Seq.R2.T C3L-02705 GBM scRNA-Seq tumor CPT0189650015 20200616_WUSTL_CPT0189650015_CGTTAATC-GCCACGCT-TTACTCAG-AAGGGTGA_S3_L003_R2_001.fastq.gz 25217192545 FASTQ NA 4ef75921-f1d4-427e-88f2-2fd9e86fba92 8714fda1daa56a390c20e745dcdf5987 NA Primary Tumor C3L-02705-71 -C3L-02705.scRNA-Seq.T.hg38 C3L-02705 GBM scRNA-Seq tumor CPT0189650015 possorted_genome_bam.bam 40835682204 BAM NA 4a371a16-ace1-4a74-902a-d1dc620f56fd c5ad8f8e27dc36c527bef6bfebeb7428 hg38 Primary Tumor C3L-02705-71 +C3L-02705.scRNA-Seq.T.hg38 C3L-02705 GBM scRNA-Seq tumor CPT0189650015 possorted_genome_bam.bam 29846950870 BAM NA 6e9347b8-7198-44e1-a4b9-2262ebf107b6 0a4091d16f4eae4f8d96aa76e9509025 hg38 Primary Tumor C3L-02705-71 C3L-02705.WGS.N C3L-02705 GBM WGS blood_normal CPT0190640002 CPT0190640002.WholeGenome.RP-1303.bam 55336589099 BAM NA 6218ca2a-3ec4-4ef6-83a3-ae00c9d83d12 e5149cb9803dd4cc33bb0c89b4d38afb hg19 Blood Derived Normal C3L-02705-31 C3L-02705.WGS.N.hg38 C3L-02705 GBM WGS blood_normal CPT0190640002 a820c7e7-180a-47e8-ad00-12e32236bbdf_wgs_gdc_realn.bam 80337375536 BAM NA 54197100-227c-4760-9df9-5c9f6e7df598 e6bde5807083cf3c0c2a1b14c76511c0 hg38 Blood Derived Normal C3L-02705-31 C3L-02705.WGS.T C3L-02705 GBM WGS tumor CPT0189650007 CPT0189650007.WholeGenome.RP-1303.bam 62119934828 BAM NA 9127722a-7be2-446a-8639-7759914ab1f2 7f3328e7e724154bbc4cd53c3410fe17 hg19 Primary Tumor C3L-02705-71,C3L-02705-72,C3L-02705-75 @@ -12831,9 +12873,9 @@ C3L-03260.WXS.N C3L-03260 GBM WXS blood_normal CPT0190200002 CPT0190200002.Whole C3L-03260.WXS.N.hg38 C3L-03260 GBM WXS blood_normal CPT0190200002 6a194913-6f77-46e2-8eb6-19fe1ff78405_wxs_gdc_realn.bam 39337293664 BAM NA f43b671d-b7d0-4afb-9492-3f25b9d5995c 20ebd5565774edb49c9d1c617cbe6fa8 hg38 Blood Derived Normal C3L-03260-31 C3L-03260.WXS.T C3L-03260 GBM WXS tumor CPT0189250006 CPT0189250006.WholeExome.RP-1303.bam 30927408831 BAM NA eb0180f7-3827-4044-b73a-7572616e1dac 0d0a196cc9b84e2c44f5f228222bd3b0 hg19 Primary Tumor C3L-03260-01 C3L-03260.WXS.T.hg38 C3L-03260 GBM WXS tumor CPT0189250006 a3156b22-4743-4eb4-9d13-0d5be60ef996_wxs_gdc_realn.bam 42928914301 BAM NA 6e2e9aa3-fb05-4645-b146-22f8a77a147f a6aae5ad4d98fca640cb11e35990d036 hg38 Primary Tumor C3L-03260-01 -C3L-03262.MethArray.Green.A.UNK_o2jknVj C3L-03262 LUAD Methylation Array tissue_normal CPT0189310006 203561450008_R05C01_Grn.idat 13676221 IDAT Green 6ff79bd1-90eb-40ce-92de-79e4ac69a826 8806b516410dc2af8dea752ab23744fe NA Solid Tissue Normal C3L-03262-04,C3L-03262-05 sample_tag=UNK_o2jknVj Duplicate item: Additional DNA requested +C3L-03262.MethArray.Green.A.ADNA_o2jknVj C3L-03262 LUAD Methylation Array tissue_normal CPT0189310006 203561450008_R05C01_Grn.idat 13676221 IDAT Green 6ff79bd1-90eb-40ce-92de-79e4ac69a826 8806b516410dc2af8dea752ab23744fe NA Solid Tissue Normal C3L-03262-04,C3L-03262-05 sample_tag=ADNA_o2jknVj Duplicate item: Additional DNA requested C3L-03262.MethArray.Green.T C3L-03262 LUAD Methylation Array tumor CPT0189280007 203219650169_R07C01_Grn.idat 13676231 IDAT Green 4438bcdd-3702-45f5-9e1d-1b7f453143f3 43b990b5c8ce03dd13070a59e4d37b95 NA Primary Tumor C3L-03262-01,C3L-03262-03 -C3L-03262.MethArray.Red.A.UNK_o2jknVj C3L-03262 LUAD Methylation Array tissue_normal CPT0189310006 203561450008_R05C01_Red.idat 13676221 IDAT Red 5ce5b57a-0bef-4f1c-9e02-12992363cf2d 33325a00fa2138d873118a47c2215499 NA Solid Tissue Normal C3L-03262-04,C3L-03262-05 sample_tag=UNK_o2jknVj Duplicate item: Additional DNA requested +C3L-03262.MethArray.Red.A.ADNA_o2jknVj C3L-03262 LUAD Methylation Array tissue_normal CPT0189310006 203561450008_R05C01_Red.idat 13676221 IDAT Red 5ce5b57a-0bef-4f1c-9e02-12992363cf2d 33325a00fa2138d873118a47c2215499 NA Solid Tissue Normal C3L-03262-04,C3L-03262-05 sample_tag=ADNA_o2jknVj Duplicate item: Additional DNA requested C3L-03262.MethArray.Red.T C3L-03262 LUAD Methylation Array tumor CPT0189280007 203219650169_R07C01_Red.idat 13676231 IDAT Red 2fcf4c87-5745-4f15-8400-acc7eaee354e f7fe307e9e4bcb84c0a1a5c24e898de7 NA Primary Tumor C3L-03262-01,C3L-03262-03 C3L-03262.miRNA-Seq.A C3L-03262 LUAD miRNA-Seq tissue_normal CPT0189310009 190130_UNC31-K00269_0188_BH2FGCBBXY_ACTTGA_S9_L006_R1_001.unaln.bam 272725713 BAM NA d10f7516-5a18-434b-8ddd-dd41f973b7e0 6e475905dfe6bab4e3095aedd6a21cb4 NA Solid Tissue Normal C3L-03262-04,C3L-03262-05 C3L-03262.miRNA-Seq.A.hg38 C3L-03262 LUAD miRNA-Seq tissue_normal CPT0189310009 b5930a04-f24c-459e-b695-d1d8ef8b7dc7_mirnaseq_gdc_realn.bam 309077234 BAM NA 65242e56-c359-4191-b4e5-b30a0be47213 9ad11388304c38d37ee2d2aea811c57a hg38 Solid Tissue Normal C3L-03262-04,C3L-03262-05 @@ -12853,8 +12895,8 @@ C3L-03262.WGS.N C3L-03262 LUAD WGS blood_normal CPT0190210002 CPT0190210002.Whol C3L-03262.WGS.N.hg38 C3L-03262 LUAD WGS blood_normal CPT0190210002 a93a956b-f67c-46da-8c83-18e69db799ed_wgs_gdc_realn.bam 82723706130 BAM NA 9359c8e3-33ed-4620-9b71-5c479dd2a9f4 db2f0250a524f7391540d8a50bc928f1 hg38 Blood Derived Normal C3L-03262-31 C3L-03262.WGS.T C3L-03262 LUAD WGS tumor CPT0189280007 CPT0189280007.WholeGenome.RP-1303.bam 54395352915 BAM NA efea4fca-95c3-416a-bce8-f43c22c3bc49 e6f21585b81bc57e582dd32836223dfe hg19 Primary Tumor C3L-03262-01,C3L-03262-03 C3L-03262.WGS.T.hg38 C3L-03262 LUAD WGS tumor CPT0189280007 a40a3846-3a11-4474-8deb-2a4629226afb_wgs_gdc_realn.bam 81199088175 BAM NA 71555590-e695-4782-9f1d-1fea8b8a11f0 e6f72e0a62a8bd5413217a1c62601afd hg38 Primary Tumor C3L-03262-01,C3L-03262-03 -C3L-03262.WXS.A.UNK_o2jknVj C3L-03262 LUAD WXS tissue_normal CPT0189310006 CPT0189310006.WholeExome.RP-1303.bam 37479624642 BAM NA 2e7c9d48-09d1-4944-96a5-543c7002f847 600f59b63b0b8a75fc483847ec5344a0 hg19 Solid Tissue Normal C3L-03262-04,C3L-03262-05 sample_tag=UNK_o2jknVj Duplicate item: Additional DNA requested -C3L-03262.WXS.A.UNK_o2jknVj.hg38 C3L-03262 LUAD WXS tissue_normal CPT0189310006 8419506b-f9d2-4fb0-bce5-271950429dc6_wxs_gdc_realn.bam 51308609883 BAM NA 382cac2a-d4c5-488d-8bda-c5eb0caba64b 0d641e07746bdc9de0238413b60262d7 hg38 Solid Tissue Normal C3L-03262-04,C3L-03262-05 sample_tag=UNK_o2jknVj Duplicate item: Additional DNA requested +C3L-03262.WXS.A.ADNA_o2jknVj C3L-03262 LUAD WXS tissue_normal CPT0189310006 CPT0189310006.WholeExome.RP-1303.bam 37479624642 BAM NA 2e7c9d48-09d1-4944-96a5-543c7002f847 600f59b63b0b8a75fc483847ec5344a0 hg19 Solid Tissue Normal C3L-03262-04,C3L-03262-05 sample_tag=ADNA_o2jknVj Duplicate item: Additional DNA requested +C3L-03262.WXS.A.ADNA_o2jknVj.hg38 C3L-03262 LUAD WXS tissue_normal CPT0189310006 8419506b-f9d2-4fb0-bce5-271950429dc6_wxs_gdc_realn.bam 51308609883 BAM NA 382cac2a-d4c5-488d-8bda-c5eb0caba64b 0d641e07746bdc9de0238413b60262d7 hg38 Solid Tissue Normal C3L-03262-04,C3L-03262-05 sample_tag=ADNA_o2jknVj Duplicate item: Additional DNA requested C3L-03262.WXS.N C3L-03262 LUAD WXS blood_normal CPT0190210002 CPT0190210002.WholeExome.RP-1303.bam 21861734499 BAM NA 81e8863a-716f-4fce-bbac-14c629de6e6b b92f49ab404a22c24b41115c3cc36bd5 hg19 Blood Derived Normal C3L-03262-31 C3L-03262.WXS.N.hg38 C3L-03262 LUAD WXS blood_normal CPT0190210002 a93a956b-f67c-46da-8c83-18e69db799ed_wxs_gdc_realn.bam 30007536859 BAM NA 376a3956-658f-44ec-ba00-fc88fed38ee1 db20f29690ae856747b16f71d303cab0 hg38 Blood Derived Normal C3L-03262-31 C3L-03262.WXS.T C3L-03262 LUAD WXS tumor CPT0189280007 CPT0189280007.WholeExome.RP-1303.bam 23493868991 BAM NA 70ceb6ad-8420-451e-ac87-5d1925ee7c8e 506d595913efebff0b7e666c1e9e5d25 hg19 Primary Tumor C3L-03262-01,C3L-03262-03 @@ -13282,7 +13324,7 @@ C3L-03405.RNA-Seq.R2.T C3L-03405 GBM RNA-Seq tumor CPT0224600006 190416_UNC32-K0 C3L-03405.RNA-Seq.transcriptome.T.hg38 C3L-03405 GBM RNA-Seq tumor CPT0224600006 d51652aa-0acf-483e-a90e-6d6dee0a86a8.rna_seq.transcriptome.gdc_realn.bam 9727472388 BAM transcriptome d8204bf6-7699-4b6f-a04f-13855ef90283 657a3d19603c38d89f09473455e9f604 hg38 Primary Tumor C3L-03405-01 C3L-03405.scRNA-Seq.R1.T C3L-03405 GBM scRNA-Seq tumor CPT0224600013 20191220_WUSTL_CPT0224600013_TAGGATAA-CCTTTGTC-GTACGCGG-AGCACACT_S5_L002_R1_001.fastq.gz 12671364384 FASTQ NA 43e57336-d3c7-46a8-81de-b42300b8e839 4fd6c918169df97615f47784690031b5 NA Primary Tumor C3L-03405-01 C3L-03405.scRNA-Seq.R2.T C3L-03405 GBM scRNA-Seq tumor CPT0224600013 20191220_WUSTL_CPT0224600013_TAGGATAA-CCTTTGTC-GTACGCGG-AGCACACT_S5_L002_R2_001.fastq.gz 26167417692 FASTQ NA 184382d4-821c-40b1-9f60-51bfc3802a6b 55a54e58f07cb31a4e3f66cf3018b285 NA Primary Tumor C3L-03405-01 -C3L-03405.scRNA-Seq.T.hg38 C3L-03405 GBM scRNA-Seq tumor CPT0224600013 possorted_genome_bam.bam 85530501708 BAM NA e243342e-cb32-476b-9ae1-26bc2a2ed862 f89b68e359c57ad73aea41f795f10bb9 hg38 Primary Tumor C3L-03405-01 +C3L-03405.scRNA-Seq.T.hg38 C3L-03405 GBM scRNA-Seq tumor CPT0224600013 possorted_genome_bam.bam 36827067033 BAM NA 271662dd-63fb-4109-8e2a-d6f5bae3e1f6 fd4f85577a2bc8778e31dd9b9198da24 hg38 Primary Tumor C3L-03405-01 C3L-03405.WGS.N C3L-03405 GBM WGS blood_normal CPT0226240002 CPT0226240002.WholeGenome.RP-1303.bam 68922224835 BAM NA 24756334-9a9c-4858-a1cd-7ee5372a812e fbf9adf0ab4bb762ecdc1397f5d56159 hg19 Blood Derived Normal C3L-03405-31 C3L-03405.WGS.N.hg38 C3L-03405 GBM WGS blood_normal CPT0226240002 403a82f6-1996-4dc4-807e-60dfeb23d36c_wgs_gdc_realn.bam 100015884430 BAM NA b380a40e-9f97-46f5-b417-ab8df4fbacb5 df8da9780ef47c9e19f0fe6242260cc5 hg38 Blood Derived Normal C3L-03405-31 C3L-03405.WGS.T C3L-03405 GBM WGS tumor CPT0224600009 CPT0224600009.WholeGenome.RP-1303.bam 64505884561 BAM NA 0eeb8b2a-70bb-472c-a048-fdeda1bdaf3a 0a687a12bcff23427c1ab1958f3ea397 hg19 Primary Tumor C3L-03405-01 @@ -14166,7 +14208,7 @@ C3L-03968.RNA-Seq.R2.T C3L-03968 GBM RNA-Seq tumor CPT0228220009 190205_UNC32-K0 C3L-03968.RNA-Seq.transcriptome.T.hg38 C3L-03968 GBM RNA-Seq tumor CPT0228220009 1deb3f46-cea3-4f49-925b-951eddd0ba88.rna_seq.transcriptome.gdc_realn.bam 9695661736 BAM transcriptome 6ce14bae-b965-4554-a85b-cc38ec4891de ddb2d00c583d32918a224255f9694421 hg38 Primary Tumor C3L-03968-01 C3L-03968.scRNA-Seq.R1.T C3L-03968 GBM scRNA-Seq tumor CPT0228220004 20191113_WUSTL_CPT0228220004_TATGATTC-CCCACAGT-ATGCTGAA-GGATGCCG_S5_L003_R1_001.fastq.gz 12332046890 FASTQ NA fde2e78c-2330-4e10-ac7b-f405d95d1a9c 252ef1d82c3093686468a861096ec187 NA Primary Tumor C3L-03968-01 C3L-03968.scRNA-Seq.R2.T C3L-03968 GBM scRNA-Seq tumor CPT0228220004 20191113_WUSTL_CPT0228220004_TATGATTC-CCCACAGT-ATGCTGAA-GGATGCCG_S5_L003_R2_001.fastq.gz 27268492073 FASTQ NA 69a226f6-99ba-4783-a417-7cd596be4868 256d74984b78ed853d6156bde8b0370b NA Primary Tumor C3L-03968-01 -C3L-03968.scRNA-Seq.T.hg38 C3L-03968 GBM scRNA-Seq tumor CPT0228220004 possorted_genome_bam.bam 61650485035 BAM NA 0f020309-c8a0-4602-810f-81dfa31cb0b4 74371966ea1bcc8678416389b19af2de hg38 Primary Tumor C3L-03968-01 +C3L-03968.scRNA-Seq.T.hg38 C3L-03968 GBM scRNA-Seq tumor CPT0228220004 possorted_genome_bam.bam 31087850916 BAM NA 514aacd9-b0dd-47c1-b49f-3a66ca04ea13 62f12b60d0ff5f5d338b504a01628b6e hg38 Primary Tumor C3L-03968-01 C3L-03968.WGS.N C3L-03968 GBM WGS blood_normal CPT0228320002 CPT0228320002.WholeGenome.RP-1303.bam 51775732268 BAM NA 9efb45b1-b5e0-48b5-86cb-660f2dafa2e8 fdb0574beba867ef5bd393d022e8e39a hg19 Blood Derived Normal C3L-03968-31 C3L-03968.WGS.N.hg38 C3L-03968 GBM WGS blood_normal CPT0228320002 8b735522-06d1-4074-adb7-0f326c2842b4_wgs_gdc_realn.bam 75690377017 BAM NA 1b49821e-bb58-4201-ae96-cb252e209018 3909b91bab18b2699192b8bfc54729c0 hg38 Blood Derived Normal C3L-03968-31 C3L-03968.WGS.T C3L-03968 GBM WGS tumor CPT0228220006 CPT0228220006.WholeGenome.RP-1303.bam 61251194504 BAM NA 8caecb2c-3677-4732-9297-62c2e37d5ff3 a972678f5ae88be3c8e7952fbb2d693f hg19 Primary Tumor C3L-03968-01 @@ -14842,6 +14884,7 @@ C3L-04216.WXS.T C3L-04216 LSCC WXS tumor CPT0304620007 CPT0304620007.WholeExome. C3L-04216.WXS.T.hg38 C3L-04216 LSCC WXS tumor CPT0304620007 44f13f39-00b5-4c5b-9582-e06616a7f968_wxs_gdc_realn.bam 30739432378 BAM NA 4c7de826-5434-4e0c-85bf-cc0a9ee5f3fa 67dd3d611e1db29f9f6ee81edac4de3d hg38 Primary Tumor C3L-04216-02,C3L-04216-03,C3L-04216-04 C3L-04231.MethArray.Green.Tbm C3L-04231 AML Methylation Array tumor_bone_marrow CPT0275480002 205555390164_R08C01_Grn.idat 13677955 IDAT Green 39b9014d-6cd9-4b3c-a999-da8abea4e182 9a1755dabfffeae5a968799937123c86 NA Primary Blood Derived Cancer - Bone Marrow C3L-04231-54 C3L-04231.MethArray.Red.Tbm C3L-04231 AML Methylation Array tumor_bone_marrow CPT0275480002 205555390164_R08C01_Red.idat 13677955 IDAT Red 17ed8321-2e2b-4c73-a191-86dbf630731f fe605439d2f8711bf748eeb59773cdac NA Primary Blood Derived Cancer - Bone Marrow C3L-04231-54 +C3L-04231.miRNA-Seq.Tbm C3L-04231 AML miRNA-Seq tumor_bone_marrow CPT0275490002 220125_UNC32-K00270_0311_AHMNYYBBXY_CAACTA_S28_L002_R1_001.unaln.bam 362742737 BAM NA ebfc821e-fffb-4d1b-9ffb-98f71a857c3d 1feef8404ecf8b36f18bf3ce0c737137 NA Primary Blood Derived Cancer - Bone Marrow C3L-04231-55 C3L-04231.RNA-Seq.R1.Tbm C3L-04231 AML RNA-Seq tumor_bone_marrow CPT0275490002 210318_UNC32-K00270_0277_AHKNTVBBXY_GCGCTCTA-GCTCCGAC_S63_L008_R1_001.fastq.gz 3267834385 FASTQ NA 0ce5469b-6555-41ad-b583-abacf090c5ff f0ece8831346e01a468bc7efdd792611 NA Primary Blood Derived Cancer - Bone Marrow C3L-04231-55 C3L-04231.RNA-Seq.R2.Tbm C3L-04231 AML RNA-Seq tumor_bone_marrow CPT0275490002 210318_UNC32-K00270_0277_AHKNTVBBXY_GCGCTCTA-GCTCCGAC_S63_L008_R2_001.fastq.gz 3783588039 FASTQ NA 14695f91-0a51-4d0d-883e-5c1fe933df93 7a970ac1de55d0fdf6538a45acec2099 NA Primary Blood Derived Cancer - Bone Marrow C3L-04231-55 C3L-04231.WGS.Nbc C3L-04231 AML WGS buccal_normal CPT0275550001 CPT0275550001.WholeGenome.RP-2158.bam 55073835986 BAM NA 9b1efd93-9766-48e1-afd2-4b8371bd5881 0b329a463eff2f44195f18dcb3ee6dbd hg19 Buccal Cell Normal C3L-04231-52 @@ -17433,9 +17476,9 @@ C3L-05465.RNA-Seq.R2.T C3L-05465 HNSCC RNA-Seq tumor CPT0300900001 20210723_P2_A C3L-05481.MethArray.Green.T C3L-05481 GBM Methylation Array tumor CPT0406370007 205555380136_R06C01_Grn.idat 13677955 IDAT Green b274228f-a33a-4fb8-be3d-4347e24c4b4e 225bc30691593a737d6c98434d1b23e1 NA Primary Tumor C3L-05481-03 C3L-05481.MethArray.Red.T C3L-05481 GBM Methylation Array tumor CPT0406370007 205555380136_R06C01_Red.idat 13677955 IDAT Red b7cc2ed3-f7c8-4d53-9333-a4b3ae5995fe 0f7794d81e119ed0faf6458d6f782d13 NA Primary Tumor C3L-05481-03 C3L-05481.miRNA-Seq.T C3L-05481 GBM miRNA-Seq tumor CPT0406370010 210702_UNC32-K00270_0289_AHKJ22BBXY_GTCCGC_S15_L005_R1_001.unaln.bam 264616979 BAM NA 4f47ee8c-81de-4193-b564-8f30527bde03 bd7c43b58fe85ba387cab46d6dc954fc NA Primary Tumor C3L-05481-03 -C3L-05481.miRNA-Seq.T.UNK_zmE5or7 C3L-05481 GBM miRNA-Seq tumor CPT0406370014 CPT3_06548_V0043_CACCGG_S1_L001_R1_001.unaln.bam 413940848 BAM NA 05af431a-cc4d-4fa4-9bdd-89c9d383c814 5d5b17d719a34b6fb2bc9e0dee77229f NA Primary Tumor C3L-05481-03 sample_tag=UNK_zmE5or7 Duplicate item: Replacement RNA aliquot per UNC request -C3L-05481.RNA-Seq.R1.T.UNK_zmE5or7 C3L-05481 GBM RNA-Seq tumor CPT0406370014 211015_UNC32-K00270_0300_BHLMLVBBXY_ACCTTGGC-GGCCTCAT_S22_L008_R1_001.fastq.gz 5087451384 FASTQ NA 3943d597-a775-439b-a983-db12f9b0ec2d 9ae0e4aeafca73fde582263acb70f39d NA Primary Tumor C3L-05481-03 sample_tag=UNK_zmE5or7 Duplicate item: Replacement RNA aliquot per UNC request -C3L-05481.RNA-Seq.R2.T.UNK_zmE5or7 C3L-05481 GBM RNA-Seq tumor CPT0406370014 211015_UNC32-K00270_0300_BHLMLVBBXY_ACCTTGGC-GGCCTCAT_S22_L008_R2_001.fastq.gz 5149213973 FASTQ NA 23eac32e-93a9-48a9-8cfd-f14448fb7fd5 35aa154ddbc3e6868b5f26f15f7e664f NA Primary Tumor C3L-05481-03 sample_tag=UNK_zmE5or7 Duplicate item: Replacement RNA aliquot per UNC request +C3L-05481.miRNA-Seq.T.RDNA_zmE5or7 C3L-05481 GBM miRNA-Seq tumor CPT0406370014 CPT3_06548_V0043_CACCGG_S1_L001_R1_001.unaln.bam 413940848 BAM NA 05af431a-cc4d-4fa4-9bdd-89c9d383c814 5d5b17d719a34b6fb2bc9e0dee77229f NA Primary Tumor C3L-05481-03 sample_tag=RDNA_zmE5or7 Duplicate item: Replacement RNA aliquot per UNC request +C3L-05481.RNA-Seq.R1.T.RDNA_zmE5or7 C3L-05481 GBM RNA-Seq tumor CPT0406370014 211015_UNC32-K00270_0300_BHLMLVBBXY_ACCTTGGC-GGCCTCAT_S22_L008_R1_001.fastq.gz 5087451384 FASTQ NA 3943d597-a775-439b-a983-db12f9b0ec2d 9ae0e4aeafca73fde582263acb70f39d NA Primary Tumor C3L-05481-03 sample_tag=RDNA_zmE5or7 Duplicate item: Replacement RNA aliquot per UNC request +C3L-05481.RNA-Seq.R2.T.RDNA_zmE5or7 C3L-05481 GBM RNA-Seq tumor CPT0406370014 211015_UNC32-K00270_0300_BHLMLVBBXY_ACCTTGGC-GGCCTCAT_S22_L008_R2_001.fastq.gz 5149213973 FASTQ NA 23eac32e-93a9-48a9-8cfd-f14448fb7fd5 35aa154ddbc3e6868b5f26f15f7e664f NA Primary Tumor C3L-05481-03 sample_tag=RDNA_zmE5or7 Duplicate item: Replacement RNA aliquot per UNC request C3L-05481.WGS.N C3L-05481 GBM WGS blood_normal CPT0402530002 CPT0402530002.WholeGenome.RP-2158.bam 29970507182 BAM NA bb8107e4-5d08-4ec2-864c-ef43b68e9592 c971d6cb2c361e6c02ff0643fde6b224 hg19 Blood Derived Normal C3L-05481-31 C3L-05481.WGS.T C3L-05481 GBM WGS tumor CPT0406370007 CPT0406370007.WholeGenome.RP-2158.bam 26730645651 BAM NA 877bc903-d839-4593-9bda-139d1e265cd6 cfa533343db9a20296ffa876780aa333 hg19 Primary Tumor C3L-05481-03 C3L-05481.WXS.N C3L-05481 GBM WXS blood_normal CPT0402530002 CPT0402530002.WholeExome.RP-1303.bam 25763962021 BAM NA e1266ab9-bddb-4450-a91c-99bef557e50c 9d57faa9638e8f0ee960aa1744bdb419 hg19 Blood Derived Normal C3L-05481-31 @@ -21748,7 +21791,7 @@ C3N-00662.RNA-Seq.R2.T C3N-00662 GBM RNA-Seq tumor CPT0087680006 171116_UNC31-K0 C3N-00662.RNA-Seq.transcriptome.T.hg38 C3N-00662 GBM RNA-Seq tumor CPT0087680006 ff764b0c-5f54-4097-8db1-fd40399109b6.rna_seq.transcriptome.gdc_realn.bam 8621409650 BAM transcriptome 4a6211f9-2ec9-4949-bcd1-812a98b6c101 15b149444f87b5c70759156358312fdf hg38 Primary Tumor C3N-00662-03 C3N-00662.scRNA-Seq.R1.T C3N-00662 GBM scRNA-Seq tumor CPT0087680014 20191122_WUSTL_CPT0087680014_AATAATGG-CCAGGGCA-TGCCTCAT-GTGTCATC_S1_L004_R1_001.fastq.gz 14835795110 FASTQ NA 8d389c12-7022-49ad-96a0-d8e8f7d4f007 842d7192228a7b47e48a9f164990f1d3 NA Primary Tumor C3N-00662-03 C3N-00662.scRNA-Seq.R2.T C3N-00662 GBM scRNA-Seq tumor CPT0087680014 20191122_WUSTL_CPT0087680014_AATAATGG-CCAGGGCA-TGCCTCAT-GTGTCATC_S1_L004_R2_001.fastq.gz 33781848129 FASTQ NA eec795f2-2324-4530-b7eb-eb67e5184af7 d270ef2770cea5dab7f5a401234edbbb NA Primary Tumor C3N-00662-03 -C3N-00662.scRNA-Seq.T.hg38 C3N-00662 GBM scRNA-Seq tumor CPT0087680014 possorted_genome_bam.bam 46419739053 BAM NA 9df09f98-f2d4-4668-89ca-22145c655fe5 70659e18cbca053ac70c55436b5532da hg38 Primary Tumor C3N-00662-03 +C3N-00662.scRNA-Seq.T.hg38 C3N-00662 GBM scRNA-Seq tumor CPT0087680014 possorted_genome_bam.bam 33941762690 BAM NA a12a483a-71a6-490c-b175-3373997ab5d5 d705a4fddaf3904e90b7aaee6704a1ef hg38 Primary Tumor C3N-00662-03 C3N-00662.WGS.N C3N-00662 GBM WGS blood_normal CPT0087720002 CPT0087720002.WholeGenome.RP-1303.bam 58036535017 BAM NA 83b1d3cf-b33a-4011-88e5-41f602fc0922 b3aaa706402126ee8ec0fd5f3ead7c14 hg19 Blood Derived Normal C3N-00662-31 C3N-00662.WGS.N.hg38 C3N-00662 GBM WGS blood_normal CPT0087720002 8c165614-a7de-4661-b701-726d28c8ac3a_wgs_gdc_realn.bam 84160516593 BAM NA dd1e269b-54b0-4731-a58e-dd1c5f87c097 3e2b6cf7e7ce60afd3977188a18adce2 hg38 Blood Derived Normal C3N-00662-31 C3N-00662.WGS.T C3N-00662 GBM WGS tumor CPT0087680009 CPT0087680009.WholeGenome.RP-1303.bam 68144530031 BAM NA 199a7bf3-052f-40d6-992e-80bebd989097 6d8cbec5d74081859a0f666d1732ac77 hg19 Primary Tumor C3N-00662-03 @@ -24569,7 +24612,7 @@ C3N-01334.RNA-Seq.R2.T C3N-01334 GBM RNA-Seq tumor CPT0125220009 180516_UNC31-K0 C3N-01334.RNA-Seq.transcriptome.T.hg38 C3N-01334 GBM RNA-Seq tumor CPT0125220009 a47a849d-cfed-4b4a-a52a-4748f024ab02.rna_seq.transcriptome.gdc_realn.bam 9235189524 BAM transcriptome 359a248b-c888-4dfc-bbb0-f3da1a1c2834 3df2906ecfc7e9d712e4cd3183ab72ba hg38 Primary Tumor C3N-01334-03 C3N-01334.scRNA-Seq.R1.T C3N-01334 GBM scRNA-Seq tumor CPT0125220004 20200618_WUSTL_CPT0125220004_GCGCAGAA-ATCTTACC-TATGGTGT-CGAACCTG_S3_L001_R1_001.fastq.gz 9509432240 FASTQ NA 9c645991-b038-4ee7-9388-61b31e0f800b 61ffdb1fc8c97c668fddacdc441b119c NA Primary Tumor C3N-01334-03 C3N-01334.scRNA-Seq.R2.T C3N-01334 GBM scRNA-Seq tumor CPT0125220004 20200618_WUSTL_CPT0125220004_GCGCAGAA-ATCTTACC-TATGGTGT-CGAACCTG_S3_L001_R2_001.fastq.gz 22676722596 FASTQ NA 444e55b6-4c1c-437e-b097-1f6fe70ce245 7759b9bd6edca8c6e5eefc01bfca73ac NA Primary Tumor C3N-01334-03 -C3N-01334.scRNA-Seq.T.hg38 C3N-01334 GBM scRNA-Seq tumor CPT0125220004 possorted_genome_bam.bam 33121021092 BAM NA 24a0e975-64d6-40ac-a0f1-433647756935 699431caa6e548cfa9676e2efd2c43c8 hg38 Primary Tumor C3N-01334-03 +C3N-01334.scRNA-Seq.T.hg38 C3N-01334 GBM scRNA-Seq tumor CPT0125220004 possorted_genome_bam.bam 25480646057 BAM NA c2689d4e-8fb5-406d-9a9c-d379d950037f bca03b32d20bb26aaceebdbf37ee5959 hg38 Primary Tumor C3N-01334-03 C3N-01334.WGS.N C3N-01334 GBM WGS blood_normal CPT0125250002 CPT0125250002.WholeGenome.RP-1303.bam 62961118881 BAM NA 998a823c-24d7-41ec-865a-62c9ee65a71b 508d106bef15c7131942375e690581f4 hg19 Blood Derived Normal C3N-01334-31 C3N-01334.WGS.N.hg38 C3N-01334 GBM WGS blood_normal CPT0125250002 1f02adc4-0b20-4fd3-ad08-5d4c6b3b4b18_wgs_gdc_realn.bam 90333471413 BAM NA 5980d118-12c4-440c-ba3d-3edfa259658a 0861cc27aa030704e8e9f2f7896aa8bb hg38 Blood Derived Normal C3N-01334-31 C3N-01334.WGS.T C3N-01334 GBM WGS tumor CPT0125220006 CPT0125220006.WholeGenome.RP-1303.bam 62455774887 BAM NA 655943fb-8990-4690-8bd0-1586f06b911e 415f953131f169bdfc70c6554a0aa234 hg19 Primary Tumor C3N-01334-03 @@ -25423,9 +25466,9 @@ C3N-01417.WXS.N C3N-01417 LUAD WXS blood_normal CPT0108220004 CPT0108220004.Whol C3N-01417.WXS.N.hg38 C3N-01417 LUAD WXS blood_normal CPT0108220004 f37e81f6-1671-4e3d-a651-7c6f9458de96_wxs_gdc_realn.bam 33377639317 BAM NA b0e55d39-f823-42a5-a1dc-6be52fdb54eb 4bb1bbb7df97c9927b4a50fc7ee32749 hg38 Blood Derived Normal C3N-01417-71 C3N-01417.WXS.T C3N-01417 LUAD WXS tumor CPT0105780009 CPT0105780009.WholeExome.RP-1303.bam 21688050232 BAM NA a681fdff-ea50-4cd7-9c28-720098dffd62 f166319b7df898bbae8c51355a813fbc hg19 Primary Tumor C3N-01417-04 C3N-01417.WXS.T.hg38 C3N-01417 LUAD WXS tumor CPT0105780009 9aff0957-aa05-46ff-8e72-f1766e9f011a_wxs_gdc_realn.bam 30119843260 BAM NA 1f71eccc-f761-42b6-9be7-84810f109131 d9081130bf3293db3d88ff398a79e6b3 hg38 Primary Tumor C3N-01417-04 -C3N-01419.MethArray.Green.A.UNK_q19J5R C3N-01419 LUAD Methylation Array tissue_normal CPT0118060008 203273630048_R05C01_Grn.idat 13676231 IDAT Green ad890daa-667b-4a11-989c-24708529b549 c4a2a5189b2e4a51d0a1a9420053b429 NA Solid Tissue Normal C3N-01419-06 sample_tag=UNK_q19J5R Duplicate item: Additional DNA requested +C3N-01419.MethArray.Green.A.ADNA_q19J5R C3N-01419 LUAD Methylation Array tissue_normal CPT0118060008 203273630048_R05C01_Grn.idat 13676231 IDAT Green ad890daa-667b-4a11-989c-24708529b549 c4a2a5189b2e4a51d0a1a9420053b429 NA Solid Tissue Normal C3N-01419-06 sample_tag=ADNA_q19J5R Duplicate item: Additional DNA requested C3N-01419.MethArray.Green.T C3N-01419 LUAD Methylation Array tumor CPT0118040009 203220070151_R02C01_Grn.idat 13676231 IDAT Green 69fed520-468c-4014-9a62-a7eff168fe56 66c6143e8caaa31f5c5916dc714667dd NA Primary Tumor C3N-01419-03 -C3N-01419.MethArray.Red.A.UNK_q19J5R C3N-01419 LUAD Methylation Array tissue_normal CPT0118060008 203273630048_R05C01_Red.idat 13676231 IDAT Red 4a1ea9d8-30e6-4282-8b05-373843c842b5 cc6b2c0ff47be30f235f364c3cc1554c NA Solid Tissue Normal C3N-01419-06 sample_tag=UNK_q19J5R Duplicate item: Additional DNA requested +C3N-01419.MethArray.Red.A.ADNA_q19J5R C3N-01419 LUAD Methylation Array tissue_normal CPT0118060008 203273630048_R05C01_Red.idat 13676231 IDAT Red 4a1ea9d8-30e6-4282-8b05-373843c842b5 cc6b2c0ff47be30f235f364c3cc1554c NA Solid Tissue Normal C3N-01419-06 sample_tag=ADNA_q19J5R Duplicate item: Additional DNA requested C3N-01419.MethArray.Red.T C3N-01419 LUAD Methylation Array tumor CPT0118040009 203220070151_R02C01_Red.idat 13676231 IDAT Red 48e7bbd4-6be2-462b-802c-aa72b695156d 2757908ad49435e3d63c1918ec5d87e0 NA Primary Tumor C3N-01419-03 C3N-01419.miRNA-Seq.A C3N-01419 LUAD miRNA-Seq tissue_normal CPT0118060005 190108_UNC31-K00269_0176_AHYGLVBBXX_CTATAC_S39_L003_R1_001.unaln.bam 241720051 BAM NA 56e91617-a1e8-467b-8fec-53a6701c1abe 3d2bcf05d914d6c38e4a6e3945f24c10 NA Solid Tissue Normal C3N-01419-06 C3N-01419.miRNA-Seq.A.hg38 C3N-01419 LUAD miRNA-Seq tissue_normal CPT0118060005 a3b47e97-bc4c-4415-bec4-cd7be6de9b63_mirnaseq_gdc_realn.bam 261040786 BAM NA 9911b26d-1535-405c-8a07-348e67db1e34 edfdc65121dcd1c7c6f10302ee7983fd hg38 Solid Tissue Normal C3N-01419-06 @@ -25441,14 +25484,14 @@ C3N-01419.RNA-Seq.R2.A C3N-01419 LUAD RNA-Seq tissue_normal CPT0118060005 181207 C3N-01419.RNA-Seq.R2.T C3N-01419 LUAD RNA-Seq tumor CPT0118040006 181207_UNC32-K00270_0137_BH2LYCBBXY_TAGCTT_S6_L008_R2_001.fastq.gz 4535754942 FASTQ NA 800d2b72-c4e3-42b9-b976-bf3216ff2412 292b1443536221f337e595d6c93d6a98 NA Primary Tumor C3N-01419-03 C3N-01419.RNA-Seq.transcriptome.A.hg38 C3N-01419 LUAD RNA-Seq tissue_normal CPT0118060005 b176a1f0-bfc5-4c37-87da-ab379b0b5671.rna_seq.transcriptome.gdc_realn.bam 10199198633 BAM transcriptome 0860cf4a-30ee-4217-8be3-dd1f8e8ea16f d242631dd788a0a03ab2c5adbc104f82 hg38 Solid Tissue Normal C3N-01419-06 C3N-01419.RNA-Seq.transcriptome.T.hg38 C3N-01419 LUAD RNA-Seq tumor CPT0118040006 4f44029c-4a2f-4951-9d69-15a771652e70.rna_seq.transcriptome.gdc_realn.bam 12536802856 BAM transcriptome 8a1adb30-d88c-415f-a728-e8fc420b1b21 74c5b26df69ed371a74b33f3d3082b05 hg38 Primary Tumor C3N-01419-03 -C3N-01419.WGS.A.UNK_q19J5R C3N-01419 LUAD WGS tissue_normal CPT0118060008 CPT0118060008.WholeGenome.RP-1303.bam 57693916713 BAM NA 5f48fc7c-cffd-488e-a7d2-0b39b62f9db2 61a18698f2d3f3fba4b14e76ee0efd41 hg19 Solid Tissue Normal C3N-01419-06 sample_tag=UNK_q19J5R Duplicate item: Additional DNA requested -C3N-01419.WGS.A.UNK_q19J5R.hg38 C3N-01419 LUAD WGS tissue_normal CPT0118060008 41fbeb7b-f0e1-4923-99d4-bf779f8459f2_wgs_gdc_realn.bam 84508537406 BAM NA f8c153df-4c3d-43b9-b566-dba5e7402d4a 8840539f4bad17170430c1b251148cab hg38 Solid Tissue Normal C3N-01419-06 sample_tag=UNK_q19J5R Duplicate item: Additional DNA requested +C3N-01419.WGS.A.ADNA_q19J5R C3N-01419 LUAD WGS tissue_normal CPT0118060008 CPT0118060008.WholeGenome.RP-1303.bam 57693916713 BAM NA 5f48fc7c-cffd-488e-a7d2-0b39b62f9db2 61a18698f2d3f3fba4b14e76ee0efd41 hg19 Solid Tissue Normal C3N-01419-06 sample_tag=ADNA_q19J5R Duplicate item: Additional DNA requested +C3N-01419.WGS.A.ADNA_q19J5R.hg38 C3N-01419 LUAD WGS tissue_normal CPT0118060008 41fbeb7b-f0e1-4923-99d4-bf779f8459f2_wgs_gdc_realn.bam 84508537406 BAM NA f8c153df-4c3d-43b9-b566-dba5e7402d4a 8840539f4bad17170430c1b251148cab hg38 Solid Tissue Normal C3N-01419-06 sample_tag=ADNA_q19J5R Duplicate item: Additional DNA requested C3N-01419.WGS.N C3N-01419 LUAD WGS blood_normal CPT0119310002 CPT0119310002.WholeGenome.RP-1303.bam 61749472469 BAM NA 1f0aa478-aaed-4214-b69c-c791e8765ab1 bef01d5668871992b23f3ee412d5df27 hg19 Blood Derived Normal C3N-01419-75 C3N-01419.WGS.N.hg38 C3N-01419 LUAD WGS blood_normal CPT0119310002 8541ee06-47ca-4632-af45-dcf0ae9e50a2_wgs_gdc_realn.bam 90725050575 BAM NA 558c8e7a-0b8e-468a-a47d-c9ecf7f3fed5 9427e1273f17143aa67ced86a7505c9a hg38 Blood Derived Normal C3N-01419-75 C3N-01419.WGS.T C3N-01419 LUAD WGS tumor CPT0118040009 CPT0118040009.WholeGenome.RP-1303.bam 57876996791 BAM NA 99832e7c-64cd-401b-92a9-934dd4941ab3 348e6ffcc2f87eb7827d975b6a11771a hg19 Primary Tumor C3N-01419-03 C3N-01419.WGS.T.hg38 C3N-01419 LUAD WGS tumor CPT0118040009 b6f5e659-0d84-4f62-b599-914804ce42fb_wgs_gdc_realn.bam 83725092795 BAM NA 7a83537b-30d6-4fdf-91c1-4796e008dbaf ba39972005ccf41e12cd548ea0ad9c1e hg38 Primary Tumor C3N-01419-03 -C3N-01419.WXS.A.UNK_q19J5R C3N-01419 LUAD WXS tissue_normal CPT0118060008 CPT0118060008.WholeExome.RP-1303.bam 19620688707 BAM NA 6428a44f-bbc5-4a1a-a076-918ea085054d 026e5e71897df9bf48a70b96cc2ac4a2 hg19 Solid Tissue Normal C3N-01419-06 sample_tag=UNK_q19J5R Duplicate item: Additional DNA requested -C3N-01419.WXS.A.UNK_q19J5R.hg38 C3N-01419 LUAD WXS tissue_normal CPT0118060008 41fbeb7b-f0e1-4923-99d4-bf779f8459f2_wxs_gdc_realn.bam 26719876766 BAM NA bbd7996a-16de-44ee-b0d7-959819b02e9b f5a9790e8ff6a047f147b629581f2515 hg38 Solid Tissue Normal C3N-01419-06 sample_tag=UNK_q19J5R Duplicate item: Additional DNA requested +C3N-01419.WXS.A.ADNA_q19J5R C3N-01419 LUAD WXS tissue_normal CPT0118060008 CPT0118060008.WholeExome.RP-1303.bam 19620688707 BAM NA 6428a44f-bbc5-4a1a-a076-918ea085054d 026e5e71897df9bf48a70b96cc2ac4a2 hg19 Solid Tissue Normal C3N-01419-06 sample_tag=ADNA_q19J5R Duplicate item: Additional DNA requested +C3N-01419.WXS.A.ADNA_q19J5R.hg38 C3N-01419 LUAD WXS tissue_normal CPT0118060008 41fbeb7b-f0e1-4923-99d4-bf779f8459f2_wxs_gdc_realn.bam 26719876766 BAM NA bbd7996a-16de-44ee-b0d7-959819b02e9b f5a9790e8ff6a047f147b629581f2515 hg38 Solid Tissue Normal C3N-01419-06 sample_tag=ADNA_q19J5R Duplicate item: Additional DNA requested C3N-01419.WXS.N C3N-01419 LUAD WXS blood_normal CPT0119310002 CPT0119310002.WholeExome.RP-1303.bam 16352888808 BAM NA c8952583-d0ce-4cb1-a947-c99c70ec91f2 d22cf5eec473c592dcce2aa8a866233d hg19 Blood Derived Normal C3N-01419-75 C3N-01419.WXS.N.hg38 C3N-01419 LUAD WXS blood_normal CPT0119310002 8541ee06-47ca-4632-af45-dcf0ae9e50a2_wxs_gdc_realn.bam 22949472162 BAM NA 7bad8534-983e-4be5-95ac-1b2c6a264267 b7c07b191129f30704a47d9b93003305 hg38 Blood Derived Normal C3N-01419-75 C3N-01419.WXS.T C3N-01419 LUAD WXS tumor CPT0118040009 CPT0118040009.WholeExome.RP-1303.bam 22614668149 BAM NA 64662474-47f1-4aeb-8139-517018852172 61acffc16f8911b63f4e802823f55fdc hg19 Primary Tumor C3N-01419-03 @@ -25577,12 +25620,12 @@ C3N-01515.RNA-Seq.genomic.T.hg38 C3N-01515 GBM RNA-Seq tumor CPT0079790006 8413b C3N-01515.RNA-Seq.R1.T C3N-01515 GBM RNA-Seq tumor CPT0079790006 171116_UNC31-K00269_0093_BHMFKJBBXX_TTAGGC_S16_L005_R1_001.fastq.gz 3931183389 FASTQ NA 4af57b23-c496-487d-868a-0c09c5e20ea4 05c5f57ec6e77ddd76aa065e78644ded NA Primary Tumor C3N-01515-01 C3N-01515.RNA-Seq.R2.T C3N-01515 GBM RNA-Seq tumor CPT0079790006 171116_UNC31-K00269_0093_BHMFKJBBXX_TTAGGC_S16_L005_R2_001.fastq.gz 4328111545 FASTQ NA da0a144a-f03c-46e9-b35c-14b0b1a9a40c caa2d2caddf4c1c504fd1d33fe897c44 NA Primary Tumor C3N-01515-01 C3N-01515.RNA-Seq.transcriptome.T.hg38 C3N-01515 GBM RNA-Seq tumor CPT0079790006 8413be23-0ccf-476c-b371-c150d6d0a720.rna_seq.transcriptome.gdc_realn.bam 10389811823 BAM transcriptome 82496b41-175d-4743-91e7-3065130f47ef 2a355f81e4d93840095875f67f07da0e hg38 Primary Tumor C3N-01515-01 -C3N-01515.WGS.N.UNK_kPL1jE C3N-01515 GBM WGS blood_normal CPT0080730002 CPT0080730002.WholeGenome.RP-1303.bam 52207974955 BAM NA 4755647c-2207-4dca-9a9c-6fe483da66c5 62cf6e91c8c5920e3fedb1104ffd56ea hg19 Blood Derived Normal C3N-01515-31 sample_tag=UNK_kPL1jE Duplicate item: Additional DNA requested -C3N-01515.WGS.N.UNK_kPL1jE.hg38 C3N-01515 GBM WGS blood_normal CPT0080730002 474dfea4-f2db-44d5-9f00-98c85f07f20b_wgs_gdc_realn.bam 75868489857 BAM NA f97f390b-0bb3-499c-b6bd-00b1afce849b 570f1f7691da38e20a6e166724b2d2ae hg38 Blood Derived Normal C3N-01515-31 sample_tag=UNK_kPL1jE Duplicate item: Additional DNA requested +C3N-01515.WGS.N.ADNA_kPL1jE C3N-01515 GBM WGS blood_normal CPT0080730002 CPT0080730002.WholeGenome.RP-1303.bam 52207974955 BAM NA 4755647c-2207-4dca-9a9c-6fe483da66c5 62cf6e91c8c5920e3fedb1104ffd56ea hg19 Blood Derived Normal C3N-01515-31 sample_tag=ADNA_kPL1jE Duplicate item: Additional DNA requested +C3N-01515.WGS.N.ADNA_kPL1jE.hg38 C3N-01515 GBM WGS blood_normal CPT0080730002 474dfea4-f2db-44d5-9f00-98c85f07f20b_wgs_gdc_realn.bam 75868489857 BAM NA f97f390b-0bb3-499c-b6bd-00b1afce849b 570f1f7691da38e20a6e166724b2d2ae hg38 Blood Derived Normal C3N-01515-31 sample_tag=ADNA_kPL1jE Duplicate item: Additional DNA requested C3N-01515.WGS.T C3N-01515 GBM WGS tumor CPT0079790009 CPT0079790009.WholeGenome.RP-1303.bam 63947622118 BAM NA 26a06e1a-93b6-4f62-b833-c306df9a077c 7cc5fc877f9269f59fa0bbbbb0a73214 hg19 Primary Tumor C3N-01515-01 C3N-01515.WGS.T.hg38 C3N-01515 GBM WGS tumor CPT0079790009 d4205a17-5d31-4f86-9a43-4631df1263ab_wgs_gdc_realn.bam 94688322512 BAM NA 0a677c0b-d4b6-48c3-8cb1-f0450487c8e1 4c90eb6f9f960eed16b323e275fe1740 hg38 Primary Tumor C3N-01515-01 -C3N-01515.WXS.N.UNK_kPL1jE C3N-01515 GBM WXS blood_normal CPT0080730002 CPT0080730002.WholeExome.RP-1303.bam 30433178668 BAM NA 3f2264d8-4724-47d2-8dce-5ffbfeacbc29 37e514e5469bb2d156dc320816fb2ee3 hg19 Blood Derived Normal C3N-01515-31 sample_tag=UNK_kPL1jE Duplicate item: Additional DNA requested -C3N-01515.WXS.N.UNK_kPL1jE.hg38 C3N-01515 GBM WXS blood_normal CPT0080730002 474dfea4-f2db-44d5-9f00-98c85f07f20b_wxs_gdc_realn.bam 40059433644 BAM NA 2150f839-57f4-4e89-b9b1-f4b36d3c2fc0 da921f20407a7a848f6430d97d1f8d77 hg38 Blood Derived Normal C3N-01515-31 sample_tag=UNK_kPL1jE Duplicate item: Additional DNA requested +C3N-01515.WXS.N.ADNA_kPL1jE C3N-01515 GBM WXS blood_normal CPT0080730002 CPT0080730002.WholeExome.RP-1303.bam 30433178668 BAM NA 3f2264d8-4724-47d2-8dce-5ffbfeacbc29 37e514e5469bb2d156dc320816fb2ee3 hg19 Blood Derived Normal C3N-01515-31 sample_tag=ADNA_kPL1jE Duplicate item: Additional DNA requested +C3N-01515.WXS.N.ADNA_kPL1jE.hg38 C3N-01515 GBM WXS blood_normal CPT0080730002 474dfea4-f2db-44d5-9f00-98c85f07f20b_wxs_gdc_realn.bam 40059433644 BAM NA 2150f839-57f4-4e89-b9b1-f4b36d3c2fc0 da921f20407a7a848f6430d97d1f8d77 hg38 Blood Derived Normal C3N-01515-31 sample_tag=ADNA_kPL1jE Duplicate item: Additional DNA requested C3N-01515.WXS.T C3N-01515 GBM WXS tumor CPT0079790009 CPT0079790009.WholeExome.RP-1303.bam 37935476804 BAM NA 6711ebe4-8aee-4b9a-9343-8b808ef2f55d b6d586f872d217c8ad45422c1326927a hg19 Primary Tumor C3N-01515-01 C3N-01515.WXS.T.hg38 C3N-01515 GBM WXS tumor CPT0079790009 d4205a17-5d31-4f86-9a43-4631df1263ab_wxs_gdc_realn.bam 51761332459 BAM NA 74431fbe-41f7-4514-9329-88da5c09fdd1 b75e51a3df40e9f64aa2456ae9327d0a hg38 Primary Tumor C3N-01515-01 C3N-01517.MethArray.Green.T C3N-01517 GBM Methylation Array tumor CPT0167530006 203028200048_R07C01_Grn.idat 13676229 IDAT Green ee436dcb-2bd8-4739-9406-a7d2bee4b7ef 4446dd74d586776bcaa254f81326e76e NA Primary Tumor C3N-01517-01 @@ -26209,10 +26252,10 @@ C3N-01650.RNA-Seq.R2.A C3N-01650 CCRCC RNA-Seq tissue_normal CPT0380430006 21031 C3N-01650.RNA-Seq.R2.T C3N-01650 CCRCC RNA-Seq tumor CPT0380400006 210318_UNC32-K00270_0277_AHKNTVBBXY_GCTTGTCA-GAACATAC_S3_L001_R2_001.fastq.gz 5036629853 FASTQ NA c1ca4303-338e-49b1-b3ef-d1c53ad1e996 554be517a5523bba8576946f1063b17c NA Primary Tumor C3N-01650-06 C3N-01650.RNA-Seq.transcriptome.A.hg38 C3N-01650 CCRCC RNA-Seq tissue_normal CPT0380430006 89b6b678-4536-4a12-a776-94a85203c4fd.rna_seq.transcriptome.gdc_realn.bam 10897024018 BAM transcriptome cdb49a2e-4180-44cf-8036-2d1a731c87bd 63948ad8ed1279a6194028c328eabfec hg38 Solid Tissue Normal C3N-01650-09 C3N-01650.RNA-Seq.transcriptome.T.hg38 C3N-01650 CCRCC RNA-Seq tumor CPT0380400006 5a3f4812-3af6-49c5-bb86-61e7f6f49a61.rna_seq.transcriptome.gdc_realn.bam 10687070165 BAM transcriptome d47ec5bc-be5d-411d-8580-f1a6551d436b 3bfa53938602d1430f03ed8e1a464e92 hg38 Primary Tumor C3N-01650-06 -C3N-01650.WGS.N.UNK_k5l2pQK C3N-01650 CCRCC WGS blood_normal CPT0405290002 CPT0405290002.WholeGenome.RP-2158.bam 30822501470 BAM NA dd1e8570-14d4-4844-9d12-686e060081e1 fdae4acfe4e0b40692a17149f77806d4 hg19 Blood Derived Normal C3N-01650-71 sample_tag=UNK_k5l2pQK Duplicate item: Replacement DNA Aliquot +C3N-01650.WGS.N.RDNA_k5l2pQK C3N-01650 CCRCC WGS blood_normal CPT0405290002 CPT0405290002.WholeGenome.RP-2158.bam 30822501470 BAM NA dd1e8570-14d4-4844-9d12-686e060081e1 fdae4acfe4e0b40692a17149f77806d4 hg19 Blood Derived Normal C3N-01650-71 sample_tag=RDNA_k5l2pQK Duplicate item: Replacement DNA Aliquot C3N-01650.WGS.T C3N-01650 CCRCC WGS tumor CPT0380400009 CPT0380400009.WholeGenome.RP-2158.bam 33958855932 BAM NA b9e32941-e0f1-48ad-9894-f6ede04d846d 5b8f5837718235b37f39134c2050ea76 hg19 Primary Tumor C3N-01650-06 C3N-01650.WXS.A C3N-01650 CCRCC WXS tissue_normal CPT0380430009 CPT0380430009.WholeExome.RP-1303.bam 23116301738 BAM NA 7a5ea787-8b09-4f48-bcac-65c3a6470de8 855d368f3bb8f17984dd62061dec8ac7 hg19 Solid Tissue Normal C3N-01650-09 -C3N-01650.WXS.N.UNK_k5l2pQK C3N-01650 CCRCC WXS blood_normal CPT0405290002 CPT0405290002.WholeExome.RP-1303.bam 24270791634 BAM NA 25a8f704-b312-4ffe-98cb-0f01a1e82a99 41d557b2410d8d37c9cbbf36e27b593a hg19 Blood Derived Normal C3N-01650-71 sample_tag=UNK_k5l2pQK Duplicate item: Replacement DNA Aliquot +C3N-01650.WXS.N.RDNA_k5l2pQK C3N-01650 CCRCC WXS blood_normal CPT0405290002 CPT0405290002.WholeExome.RP-1303.bam 24270791634 BAM NA 25a8f704-b312-4ffe-98cb-0f01a1e82a99 41d557b2410d8d37c9cbbf36e27b593a hg19 Blood Derived Normal C3N-01650-71 sample_tag=RDNA_k5l2pQK Duplicate item: Replacement DNA Aliquot C3N-01650.WXS.T C3N-01650 CCRCC WXS tumor CPT0380400009 CPT0380400009.WholeExome.RP-1303.bam 21551619374 BAM NA ef003874-6376-4fd6-9d77-e5bb1c84d150 22e100a4a18d043aa5b171ec8ed570b6 hg19 Primary Tumor C3N-01650-06 C3N-01651.MethArray.Green.A C3N-01651 CCRCC Methylation Array tissue_normal CPT0088710009 204930640041_R04C01_Grn.idat 13677885 IDAT Green 7691f6c2-f580-4c00-a0d6-ffb9c12bc0f7 2ad0dff0e8ed6b07ba7fddaa43df2498 NA Solid Tissue Normal C3N-01651-10 C3N-01651.MethArray.Green.T C3N-01651 CCRCC Methylation Array tumor CPT0088690009 202176290145_R05C01_Grn.idat 13676225 IDAT Green 4665466b-9645-4728-b73e-ef0d79234982 f559f1cdeaeaa652efb01da728e44296 NA Primary Tumor C3N-01651-01 @@ -26806,7 +26849,7 @@ C3N-01798.RNA-Seq.R2.T C3N-01798 GBM RNA-Seq tumor CPT0167750010 180516_UNC31-K0 C3N-01798.RNA-Seq.transcriptome.T.hg38 C3N-01798 GBM RNA-Seq tumor CPT0167750010 65d28268-f99b-438e-8798-ed43028ba352.rna_seq.transcriptome.gdc_realn.bam 11175709099 BAM transcriptome ecb795bc-6215-4f5d-a81d-d6ceb01603c0 0b52dd193bd70d0ae0748a99ad00f100 hg38 Primary Tumor C3N-01798-01,C3N-01798-02 C3N-01798.scRNA-Seq.R1.T C3N-01798 GBM scRNA-Seq tumor CPT0167750015 20191220_WUSTL_CPT0167750015_CCACTACA-GATTCTGG-TGCGGCTT-ATGAAGAC_S3_L001_R1_001.fastq.gz 11173530187 FASTQ NA 39077fc2-1010-4e46-b6d7-04f14957584c cfe99402393be7dfdbb562072fb446b7 NA Primary Tumor C3N-01798-01 C3N-01798.scRNA-Seq.R2.T C3N-01798 GBM scRNA-Seq tumor CPT0167750015 20191220_WUSTL_CPT0167750015_CCACTACA-GATTCTGG-TGCGGCTT-ATGAAGAC_S3_L001_R2_001.fastq.gz 26931565159 FASTQ NA c5b9e968-afcd-413b-b96c-38ccf550950f f6598c0caa7560c9006b132d515e1295 NA Primary Tumor C3N-01798-01 -C3N-01798.scRNA-Seq.T.hg38 C3N-01798 GBM scRNA-Seq tumor CPT0167750015 possorted_genome_bam.bam 52737948908 BAM NA 751c3b8b-2d3f-40dd-bf66-ed6c59ec7dc9 3a9a24c0f25df8c3d5ecbd4661c09f93 hg38 Primary Tumor C3N-01798-01 +C3N-01798.scRNA-Seq.T.hg38 C3N-01798 GBM scRNA-Seq tumor CPT0167750015 possorted_genome_bam.bam 32346182334 BAM NA a72c6a09-a388-4146-81b1-35161b7e952d a399407ab72dbf08fc883f35e7af53a4 hg38 Primary Tumor C3N-01798-01 C3N-01798.WGS.N C3N-01798 GBM WGS blood_normal CPT0167810002 CPT0167810002.WholeGenome.RP-1303.bam 67516152886 BAM NA 842ab574-e778-41d8-9999-5f5bdbf239dc e42d563bae88ec65ce0b0377b03ea51d hg19 Blood Derived Normal C3N-01798-71 C3N-01798.WGS.N.hg38 C3N-01798 GBM WGS blood_normal CPT0167810002 3fe573bd-7595-4c87-8006-ae55bfb46f6d_wgs_gdc_realn.bam 97251429797 BAM NA eabb8aaa-0339-4d65-828a-4c144da9442d 5ab6c6a438f55908bb3b16bdae6126bb hg38 Blood Derived Normal C3N-01798-71 C3N-01798.WGS.T C3N-01798 GBM WGS tumor CPT0167750007 CPT0167750007.WholeGenome.RP-1303.bam 67719339828 BAM NA 0ec21406-e51f-4958-a0aa-583cd64a81d2 b919db9dcd3c6a9832766e7399879228 hg19 Primary Tumor C3N-01798-01,C3N-01798-02 @@ -26963,7 +27006,7 @@ C3N-01814.RNA-Seq.R2.T C3N-01814 GBM RNA-Seq tumor CPT0167860010 180516_UNC31-K0 C3N-01814.RNA-Seq.transcriptome.T.hg38 C3N-01814 GBM RNA-Seq tumor CPT0167860010 43eb433d-6b85-4aee-8ce2-d3faa8540fca.rna_seq.transcriptome.gdc_realn.bam 8974684972 BAM transcriptome d5e89aea-2168-4690-8f83-cab477e46527 8389136677e3a76885d031f844e39643 hg38 Primary Tumor C3N-01814-01,C3N-01814-02 C3N-01814.scRNA-Seq.R1.T C3N-01814 GBM scRNA-Seq tumor CPT0167860015 20191112_WUSTL_CPT0167860015_TTTCATGA-ACGTCCCT-CGCATGTG-GAAGGAAC_S6_L003_R1_001.fastq.gz 14858049776 FASTQ NA 763a1b3e-68a5-4e4e-819a-aba30874cafc 1660259f8d5517f534bfc08e4167922e NA Primary Tumor C3N-01814-01 C3N-01814.scRNA-Seq.R2.T C3N-01814 GBM scRNA-Seq tumor CPT0167860015 20191112_WUSTL_CPT0167860015_TTTCATGA-ACGTCCCT-CGCATGTG-GAAGGAAC_S6_L003_R2_001.fastq.gz 36982151357 FASTQ NA ae555dfa-4a64-4170-a34f-3c6bf957775f 1be8e5e5a873a307ff11e6375561672e NA Primary Tumor C3N-01814-01 -C3N-01814.scRNA-Seq.T.hg38 C3N-01814 GBM scRNA-Seq tumor CPT0167860015 possorted_genome_bam.bam 55622998827 BAM NA 51c5db9e-6a1b-479c-ad7c-2fc165f0c335 234c3a22080d6792ba72f98c29eb7bea hg38 Primary Tumor C3N-01814-01 +C3N-01814.scRNA-Seq.T.hg38 C3N-01814 GBM scRNA-Seq tumor CPT0167860015 possorted_genome_bam.bam 44015806134 BAM NA 9a142ba2-e139-404b-9ed2-94ee0d7ea463 f3b13bc4e81a4e5a7a799b6c5b703835 hg38 Primary Tumor C3N-01814-01 C3N-01814.WGS.N C3N-01814 GBM WGS blood_normal CPT0167920004 CPT0167920004.WholeGenome.RP-1303.bam 53609130596 BAM NA 6f71568a-9f40-4fc8-9e40-4792ea5434e4 5b641d011aed816daf49372d778c22a2 hg19 Blood Derived Normal C3N-01814-71 C3N-01814.WGS.N.hg38 C3N-01814 GBM WGS blood_normal CPT0167920004 05e1c388-5dbe-44bd-8309-474ce6854f2a_wgs_gdc_realn.bam 76750989332 BAM NA e7f7509e-0375-4e1c-a22c-b5ba92fa02cd a990577030ee889b373300ec62249a48 hg38 Blood Derived Normal C3N-01814-71 C3N-01814.WGS.T C3N-01814 GBM WGS tumor CPT0167860007 CPT0167860007.WholeGenome.RP-1303.bam 58970002690 BAM NA 419840c0-0d43-4a90-820d-b7fc05c71d1d dd7cca2dbb4515010651bd1abfc146d3 hg19 Primary Tumor C3N-01814-01,C3N-01814-02 @@ -26983,7 +27026,7 @@ C3N-01815.RNA-Seq.R2.T C3N-01815 GBM RNA-Seq tumor CPT0167970009 180516_UNC31-K0 C3N-01815.RNA-Seq.transcriptome.T.hg38 C3N-01815 GBM RNA-Seq tumor CPT0167970009 c3f20523-ca78-45ef-a3fb-185155bf5fdd.rna_seq.transcriptome.gdc_realn.bam 12245008309 BAM transcriptome 89cf69bb-c697-410f-9533-2f5d10c77e04 1efd5232c1864820f952c509a4dd60b1 hg38 Primary Tumor C3N-01815-01 C3N-01815.scRNA-Seq.R1.T C3N-01815 GBM scRNA-Seq tumor CPT0167970014 20191218_WUSTL_CPT0167970014_ACAGAGGT-TATAGTTG-CGGTCCCA-GTCCTAAC_S1_L003_R1_001.fastq.gz 11428500305 FASTQ NA b74fa3fd-3586-4a83-8fde-e4501100df58 1abfbe08aa8a7dfe2991a264f8a37bb3 NA Primary Tumor C3N-01815-01 C3N-01815.scRNA-Seq.R2.T C3N-01815 GBM scRNA-Seq tumor CPT0167970014 20191218_WUSTL_CPT0167970014_ACAGAGGT-TATAGTTG-CGGTCCCA-GTCCTAAC_S1_L003_R2_001.fastq.gz 27122742441 FASTQ NA 19bf5a8b-a0e8-4b5e-8d97-8f221f992be2 a1a1da8461c5793b0e39873bb669ba3b NA Primary Tumor C3N-01815-01 -C3N-01815.scRNA-Seq.T.hg38 C3N-01815 GBM scRNA-Seq tumor CPT0167970014 possorted_genome_bam.bam 50204532721 BAM NA 786b7389-4e04-449e-a8b2-195dd683893c 84854d6bde1d089b05092b232462a1ca hg38 Primary Tumor C3N-01815-01 +C3N-01815.scRNA-Seq.T.hg38 C3N-01815 GBM scRNA-Seq tumor CPT0167970014 possorted_genome_bam.bam 31798102492 BAM NA 97a21536-05ef-4299-a499-6ebe3b549d7e be0cb592ec948f3f2af87a839258f967 hg38 Primary Tumor C3N-01815-01 C3N-01815.WGS.N C3N-01815 GBM WGS blood_normal CPT0168030004 CPT0168030004.WholeGenome.RP-1303.bam 58495170426 BAM NA ef61a326-08b5-435b-b40f-6d5b25c5fd95 05699362dfd59f8dd50171b5c89bb379 hg19 Blood Derived Normal C3N-01815-71 C3N-01815.WGS.N.hg38 C3N-01815 GBM WGS blood_normal CPT0168030004 f3005199-2091-4c0e-9eb7-003fc235563b_wgs_gdc_realn.bam 85488812992 BAM NA 3871bd67-8f7f-4779-836f-244104dcfd7d 002b0d8eb80aa96fba51a95c9020602b hg38 Blood Derived Normal C3N-01815-71 C3N-01815.WGS.T C3N-01815 GBM WGS tumor CPT0167970006 CPT0167970006.WholeGenome.RP-1303.bam 55488853216 BAM NA 1674650c-f516-4593-bb34-f6c363e3ee5c bc78611fe2b456eb6998078d38688584 hg19 Primary Tumor C3N-01815-01 @@ -27003,7 +27046,7 @@ C3N-01816.RNA-Seq.R2.T C3N-01816 GBM RNA-Seq tumor CPT0168080009 180516_UNC31-K0 C3N-01816.RNA-Seq.transcriptome.T.hg38 C3N-01816 GBM RNA-Seq tumor CPT0168080009 db8e4fa4-97df-4b38-92eb-4c1a048e720e.rna_seq.transcriptome.gdc_realn.bam 12961390945 BAM transcriptome 54f71eca-5f00-4290-8cc2-0ce2df637b7b 4a9a7c415d7fba7bbfc6223fe8ad1e4c hg38 Primary Tumor C3N-01816-01 C3N-01816.scRNA-Seq.R1.T C3N-01816 GBM scRNA-Seq tumor CPT0168080014 20200608_WUSTL_CPT0168080014_AGGCTACC-CTAGCTGT-GCCAACAA-TATTGGTG_S1_L003_R1_001.fastq.gz 9910411370 FASTQ NA 29127cc1-d844-4345-9bf5-d1844e1c2c70 afd2e3f2bd7f203ae697f374657c61ad NA Primary Tumor C3N-01816-01 C3N-01816.scRNA-Seq.R2.T C3N-01816 GBM scRNA-Seq tumor CPT0168080014 20200608_WUSTL_CPT0168080014_AGGCTACC-CTAGCTGT-GCCAACAA-TATTGGTG_S1_L003_R2_001.fastq.gz 24642737722 FASTQ NA a4e613cb-85fc-4ecc-8f13-af9809e13f88 6434cd1f75bb00d9adc103d303e770b8 NA Primary Tumor C3N-01816-01 -C3N-01816.scRNA-Seq.T.hg38 C3N-01816 GBM scRNA-Seq tumor CPT0168080014 possorted_genome_bam.bam 42637716095 BAM NA 87c9849c-6879-488c-9a2b-6efdf6657dc8 d9aa37d70aa01b14630e6b0cfd1df565 hg38 Primary Tumor C3N-01816-01 +C3N-01816.scRNA-Seq.T.hg38 C3N-01816 GBM scRNA-Seq tumor CPT0168080014 possorted_genome_bam.bam 30045096155 BAM NA 779821e7-a1f6-4d1f-8ced-b9e338552da3 ef3503a94ea6bc5d6d51235dec8e9b05 hg38 Primary Tumor C3N-01816-01 C3N-01816.WGS.N C3N-01816 GBM WGS blood_normal CPT0168120002 CPT0168120002.WholeGenome.RP-1303.bam 62511736580 BAM NA 0301404e-c1d2-44f0-a649-ae43d93119e1 1295d8161fb2e1d42a380d0278fb30d7 hg19 Blood Derived Normal C3N-01816-71 C3N-01816.WGS.N.hg38 C3N-01816 GBM WGS blood_normal CPT0168120002 0582feca-5f76-4ca8-99a1-2183174f62a9_wgs_gdc_realn.bam 91027023070 BAM NA 96df1f35-0652-480a-90cf-9b4e184b5fa3 ca391ba69c0b6ef9b2169aacb744b1cb hg38 Blood Derived Normal C3N-01816-71 C3N-01816.WGS.T C3N-01816 GBM WGS tumor CPT0168080006 CPT0168080006.WholeGenome.RP-1303.bam 56381322083 BAM NA c33aa02f-33e0-45db-97a8-85b741b55b51 98494c91c4d5ca839546005311c2ffb4 hg19 Primary Tumor C3N-01816-01 @@ -29210,7 +29253,7 @@ C3N-02181.RNA-Seq.R2.T C3N-02181 GBM RNA-Seq tumor CPT0168380009 180516_UNC31-K0 C3N-02181.RNA-Seq.transcriptome.T.hg38 C3N-02181 GBM RNA-Seq tumor CPT0168380009 905aab99-b8f4-4769-a3eb-4b5d570fffaf.rna_seq.transcriptome.gdc_realn.bam 11885329706 BAM transcriptome e2c3d0fc-a230-43ae-ac13-5277f2bd3de7 4214279281cf8bdaf54eda0cbf78550b hg38 Primary Tumor C3N-02181-02 C3N-02181.scRNA-Seq.R1.T C3N-02181 GBM scRNA-Seq tumor CPT0168380014 20200611_WUSTL_CPT0168380014_GTGTATTA-TGTGCGGG-ACCATAAC-CAACGCCT_S4_L003_R1_001.fastq.gz 13201477088 FASTQ NA 37025c07-5429-415d-97b7-2146c0dea79d 7975a1e42ea5b6028d136606486f7a2b NA Primary Tumor C3N-02181-02 C3N-02181.scRNA-Seq.R2.T C3N-02181 GBM scRNA-Seq tumor CPT0168380014 20200611_WUSTL_CPT0168380014_GTGTATTA-TGTGCGGG-ACCATAAC-CAACGCCT_S4_L003_R2_001.fastq.gz 31578941138 FASTQ NA dbc7f1b2-21b1-4506-8c2d-fef4951a0b10 82e73bee1aa0fcff8affe78e57ed2aff NA Primary Tumor C3N-02181-02 -C3N-02181.scRNA-Seq.T.hg38 C3N-02181 GBM scRNA-Seq tumor CPT0168380014 possorted_genome_bam.bam 53565068915 BAM NA 50bfa27c-ff96-418a-bc29-89a7e5491b6b 38d96197d54b54675d7d1673a12c4cef hg38 Primary Tumor C3N-02181-02 +C3N-02181.scRNA-Seq.T.hg38 C3N-02181 GBM scRNA-Seq tumor CPT0168380014 possorted_genome_bam.bam 37509207219 BAM NA 834eaf46-4552-457c-bd67-b9dfa9161dfa d2a07f4abad92635679a530c69d563d9 hg38 Primary Tumor C3N-02181-02 C3N-02181.WGS.N C3N-02181 GBM WGS blood_normal CPT0168430002 CPT0168430002.WholeGenome.RP-1303.bam 61662926101 BAM NA ddc57c40-b987-4ab8-abcd-3238e31dff72 689a11f1b546d7d392dbc89d22e43694 hg19 Blood Derived Normal C3N-02181-71 C3N-02181.WGS.N.hg38 C3N-02181 GBM WGS blood_normal CPT0168430002 c1dac155-9fca-4217-893e-8b02a8e95dd4_wgs_gdc_realn.bam 90545302597 BAM NA cfde6003-aa52-42d0-b12c-ec711668f23b b681c09adbebb5d780462d6bd0858923 hg38 Blood Derived Normal C3N-02181-71 C3N-02181.WGS.T C3N-02181 GBM WGS tumor CPT0168380006 CPT0168380006.WholeGenome.RP-1303.bam 63204082007 BAM NA f6710fcd-9939-4c1b-a321-ca7614e48ba2 1127701d6e4052f44a7149a0bec181f7 hg19 Primary Tumor C3N-02181-02 @@ -29281,7 +29324,7 @@ C3N-02188.RNA-Seq.R2.T C3N-02188 GBM RNA-Seq tumor CPT0168830009 180516_UNC31-K0 C3N-02188.RNA-Seq.transcriptome.T.hg38 C3N-02188 GBM RNA-Seq tumor CPT0168830009 6a97a580-2e26-4e47-b70f-75e3f85fbdcd.rna_seq.transcriptome.gdc_realn.bam 14177712757 BAM transcriptome 2e768ccd-1c3f-4618-8a69-8edfb39f0888 7aa6aecdba5b8da1c3c5410d2934346a hg38 Primary Tumor C3N-02188-03 C3N-02188.scRNA-Seq.R1.T C3N-02188 GBM scRNA-Seq tumor CPT0168830014 20200603_WUSTL_CPT0168830014_GCATCTCC-TGTAAGGT-CTGCGATG-AACGTCAA_S4_L004_R1_001.fastq.gz 7649283315 FASTQ NA d98e9606-3a55-41ce-a742-013daebff0da 29f2ede89bb12353aea6ac941037099b NA Primary Tumor C3N-02188-03 C3N-02188.scRNA-Seq.R2.T C3N-02188 GBM scRNA-Seq tumor CPT0168830014 20200603_WUSTL_CPT0168830014_GCATCTCC-TGTAAGGT-CTGCGATG-AACGTCAA_S4_L004_R2_001.fastq.gz 18359540278 FASTQ NA 60112146-2f56-4df0-ad7e-c8767a6b1e17 3f7c8199ffa5f7cf362f611be42a30ae NA Primary Tumor C3N-02188-03 -C3N-02188.scRNA-Seq.T.hg38 C3N-02188 GBM scRNA-Seq tumor CPT0168830014 possorted_genome_bam.bam 29706940431 BAM NA fee9dbfe-34ca-4b97-a7f6-ceaa390b9971 26ea052bf2825221dfe6a436b546f4bf hg38 Primary Tumor C3N-02188-03 +C3N-02188.scRNA-Seq.T.hg38 C3N-02188 GBM scRNA-Seq tumor CPT0168830014 possorted_genome_bam.bam 22969152976 BAM NA a8bb406b-e9be-468c-bd0b-511c327fcc6c d7b3899e426bbb32cab57df17496ed18 hg38 Primary Tumor C3N-02188-03 C3N-02188.WGS.N C3N-02188 GBM WGS blood_normal CPT0168870002 CPT0168870002.WholeGenome.RP-1303.bam 67438684582 BAM NA e7fae748-9aad-44b8-a676-87f91c3812be 4d310f44d7e587f6706f8d68be9dde0d hg19 Blood Derived Normal C3N-02188-71 C3N-02188.WGS.N.hg38 C3N-02188 GBM WGS blood_normal CPT0168870002 ea611a56-b305-4dcc-9d4b-620f7ff6410a_wgs_gdc_realn.bam 99011112123 BAM NA 462ec60f-d9e1-4cca-91e6-6146d9e12243 885082e5643d4b0fd2febc01cb7b51e3 hg38 Blood Derived Normal C3N-02188-71 C3N-02188.WGS.T C3N-02188 GBM WGS tumor CPT0168830006 CPT0168830006.WholeGenome.RP-1303.bam 59728142886 BAM NA e9940759-3543-4d50-ab47-566af6b808dd a47920aed823e5cdd8446d2388c011d3 hg19 Primary Tumor C3N-02188-03 @@ -29301,7 +29344,7 @@ C3N-02190.RNA-Seq.R2.T C3N-02190 GBM RNA-Seq tumor CPT0205450010 180918_UNC31-K0 C3N-02190.RNA-Seq.transcriptome.T.hg38 C3N-02190 GBM RNA-Seq tumor CPT0205450010 169d443f-d12e-4104-a2b0-f9e01e300031.rna_seq.transcriptome.gdc_realn.bam 14757680771 BAM transcriptome 6507a9ec-86f7-4172-80f1-a2a88d0cfa8c 3c2391038e2e4ba32aef6174df047afc hg38 Primary Tumor C3N-02190-01,C3N-02190-02 C3N-02190.scRNA-Seq.R1.T C3N-02190 GBM scRNA-Seq tumor CPT0205450015 20191030_WUSTL_CPT0205450015_CCACTTAT-AACTGGCG-TTGGCATA-GGTAACGC_S1_L004_R1_001.fastq.gz 8605688275 FASTQ NA a0b8f93d-3c1f-4234-88b7-aa9605fba941 053c7569023b9598d13267480e32b4c9 NA Primary Tumor C3N-02190-01 C3N-02190.scRNA-Seq.R2.T C3N-02190 GBM scRNA-Seq tumor CPT0205450015 20191030_WUSTL_CPT0205450015_CCACTTAT-AACTGGCG-TTGGCATA-GGTAACGC_S1_L004_R2_001.fastq.gz 18925261781 FASTQ NA d7f6adc2-afc3-47e3-83fb-7110e2e60ef9 06e52eaf9cc7dda9db182ed74b5a6ea5 NA Primary Tumor C3N-02190-01 -C3N-02190.scRNA-Seq.T.hg38 C3N-02190 GBM scRNA-Seq tumor CPT0205450015 possorted_genome_bam.bam 51105729366 BAM NA bcbe38ac-580e-4434-80f4-ee6008f622c1 840ce09c66cc52184134b67d26949e7b hg38 Primary Tumor C3N-02190-01 +C3N-02190.scRNA-Seq.T.hg38 C3N-02190 GBM scRNA-Seq tumor CPT0205450015 possorted_genome_bam.bam 21809890384 BAM NA c720f1da-f739-44f0-b577-073daf6f6ba5 3359a3a1d1035c7f8ee3c1b630a9aec2 hg38 Primary Tumor C3N-02190-01 C3N-02190.WGS.N C3N-02190 GBM WGS blood_normal CPT0205510002 CPT0205510002.WholeGenome.RP-1303.bam 56523101733 BAM NA 69044463-d458-4dfd-8fa5-77ace6a4da7e 60f6c0aebba70eb143278fdcb1bfc4b0 hg19 Blood Derived Normal C3N-02190-71 C3N-02190.WGS.N.hg38 C3N-02190 GBM WGS blood_normal CPT0205510002 a6e52347-ea57-438b-963b-26d708da3ad1_wgs_gdc_realn.bam 82619204743 BAM NA 1907eba9-edc5-45eb-bf07-21627298553b b43ac86a2d62537f73efcf7fd586649b hg38 Blood Derived Normal C3N-02190-71 C3N-02190.WGS.T C3N-02190 GBM WGS tumor CPT0205450007 CPT0205450007.WholeGenome.RP-1303.bam 65614611212 BAM NA 5e3bdebf-990c-4e85-aea5-c07ddfc1b687 6f55c233c13ac83a24ee190474ee82d5 hg19 Primary Tumor C3N-02190-01,C3N-02190-02 @@ -32378,7 +32421,7 @@ C3N-02769.RNA-Seq.R2.T C3N-02769 GBM RNA-Seq tumor CPT0205570006 181002_UNC31-K0 C3N-02769.RNA-Seq.transcriptome.T.hg38 C3N-02769 GBM RNA-Seq tumor CPT0205570006 4b05fe2e-87b4-4a0e-9d8f-bca88c29b58e.rna_seq.transcriptome.gdc_realn.bam 10847506015 BAM transcriptome 062cfafb-e4c4-4e63-998b-0e1aad22c887 5438c9f764cc085502e964fbfc7aeb2d hg38 Primary Tumor C3N-02769-02 C3N-02769.scRNA-Seq.R1.T C3N-02769 GBM scRNA-Seq tumor CPT0205570014 20200615_WUSTL_CPT0205570014_AATAATGG-CCAGGGCA-TGCCTCAT-GTGTCATC_S1_L003_R1_001.fastq.gz 11929454541 FASTQ NA 2f89a031-595d-48dd-9a51-370d57ac9c6e ff970a9e16d1f4cb6d91cf1c78a439bc NA Primary Tumor C3N-02769-02 C3N-02769.scRNA-Seq.R2.T C3N-02769 GBM scRNA-Seq tumor CPT0205570014 20200615_WUSTL_CPT0205570014_AATAATGG-CCAGGGCA-TGCCTCAT-GTGTCATC_S1_L003_R2_001.fastq.gz 27196649078 FASTQ NA cba6562b-14a2-4f4c-b4be-0777a59e6481 ab57afb2890b2999b9cb429b48cefac9 NA Primary Tumor C3N-02769-02 -C3N-02769.scRNA-Seq.T.hg38 C3N-02769 GBM scRNA-Seq tumor CPT0205570014 possorted_genome_bam.bam 45672578942 BAM NA ed967777-ad82-4d8a-816f-667cf7ef8844 8277f9a506e75250cb0ae147b749dcda hg38 Primary Tumor C3N-02769-02 +C3N-02769.scRNA-Seq.T.hg38 C3N-02769 GBM scRNA-Seq tumor CPT0205570014 possorted_genome_bam.bam 29968048497 BAM NA 9fb3b674-788a-4e5b-aca2-1aa637f49ecc 02a4a37e036b58d15a5feaa3570a5d37 hg38 Primary Tumor C3N-02769-02 C3N-02769.WGS.N C3N-02769 GBM WGS blood_normal CPT0205620002 CPT0205620002.WholeGenome.RP-1303.bam 64625748534 BAM NA 86e332dd-384a-40f4-b6a1-691c9df72b2f 6a6c7a419bd96bb50105963b763d9bc7 hg19 Blood Derived Normal C3N-02769-71 C3N-02769.WGS.N.hg38 C3N-02769 GBM WGS blood_normal CPT0205620002 676c0ccc-0273-4827-8d9a-4bf5e7af912c_wgs_gdc_realn.bam 93747243868 BAM NA 4c86fc2d-d1dc-44e3-8a3f-a6c8a0ec4811 f5e5e4542f87e7bef7fdd56270052ac1 hg38 Blood Derived Normal C3N-02769-71 C3N-02769.WGS.T C3N-02769 GBM WGS tumor CPT0205570009 CPT0205570009.WholeGenome.RP-1303.bam 64787894653 BAM NA fddbda1a-4f41-40b3-aabf-b0c117753fa1 d99292496ec8a1787fdc8f0e36a2adba hg19 Primary Tumor C3N-02769-02 @@ -32432,7 +32475,7 @@ C3N-02783.RNA-Seq.R2.T C3N-02783 GBM RNA-Seq tumor CPT0205890006 181002_UNC31-K0 C3N-02783.RNA-Seq.transcriptome.T.hg38 C3N-02783 GBM RNA-Seq tumor CPT0205890006 d6221d0f-b177-4380-a987-924dc5d1e99b.rna_seq.transcriptome.gdc_realn.bam 11971926251 BAM transcriptome 37791d6e-816c-4f15-b306-ccbdca90c586 645f824872212f2927472f607b8fcffb hg38 Primary Tumor C3N-02783-05 C3N-02783.scRNA-Seq.R1.T C3N-02783 GBM scRNA-Seq tumor CPT0205890014 20200108_WUSTL_CPT0205890014_GAGGATCT-AGACCATA-TCCTGCGC-CTTATGAG_S3_L001_R1_001.fastq.gz 7681086081 FASTQ NA 98e869a4-4485-4e92-a24e-e3edf83fcc1c 2b1ea372edff2273cf2f97521975fa6a NA Primary Tumor C3N-02783-05 C3N-02783.scRNA-Seq.R2.T C3N-02783 GBM scRNA-Seq tumor CPT0205890014 20200108_WUSTL_CPT0205890014_GAGGATCT-AGACCATA-TCCTGCGC-CTTATGAG_S3_L001_R2_001.fastq.gz 18013082534 FASTQ NA 1c44a09d-a35d-404a-8bba-95d59425b678 81e1e82cd0646be44b47804be228f444 NA Primary Tumor C3N-02783-05 -C3N-02783.scRNA-Seq.T.hg38 C3N-02783 GBM scRNA-Seq tumor CPT0205890014 possorted_genome_bam.bam 28861286820 BAM NA af8f8797-cf28-4313-9041-f06741e0d27a 06df1f6d3a7357f8dfcb8f0469bca0b3 hg38 Primary Tumor C3N-02783-05 +C3N-02783.scRNA-Seq.T.hg38 C3N-02783 GBM scRNA-Seq tumor CPT0205890014 possorted_genome_bam.bam 22655123367 BAM NA 134211a0-bc5e-4b42-ab4f-425517ca00dc 0899977c5ebcd214aa05c4f35e687faf hg38 Primary Tumor C3N-02783-05 C3N-02783.WGS.N C3N-02783 GBM WGS blood_normal CPT0205950002 CPT0205950002.WholeGenome.RP-1303.bam 54585294438 BAM NA be13a90f-4a0d-4e5f-aaa6-08f583b3f1eb f2b00ea005f2bf9bd848dd5ca82d63a2 hg19 Blood Derived Normal C3N-02783-71 C3N-02783.WGS.N.hg38 C3N-02783 GBM WGS blood_normal CPT0205950002 d3bee3fd-bd2d-4191-ac63-a1f864f33004_wgs_gdc_realn.bam 79064217342 BAM NA 0382203c-2b40-4e1c-ba95-a75bfc8347d2 83add3a85b665131dad313f70b44d23d hg38 Blood Derived Normal C3N-02783-71 C3N-02783.WGS.T C3N-02783 GBM WGS tumor CPT0205890009 CPT0205890009.WholeGenome.RP-1303.bam 64343853541 BAM NA b1425615-a9a7-4f39-8bba-64f9b2260ba9 e748ca5dbdae1b2075196085e902173f hg19 Primary Tumor C3N-02783-05 @@ -32452,7 +32495,7 @@ C3N-02784.RNA-Seq.R2.T C3N-02784 GBM RNA-Seq tumor CPT0206000010 180918_UNC31-K0 C3N-02784.RNA-Seq.transcriptome.T.hg38 C3N-02784 GBM RNA-Seq tumor CPT0206000010 3f492a04-12ca-4dd8-a1ee-aac7d7fc838a.rna_seq.transcriptome.gdc_realn.bam 11712215630 BAM transcriptome ab4c1381-433a-4d1e-a7cc-feb6849f895f 0dceed5de80231f3e194f8a722bf5c9c hg38 Primary Tumor C3N-02784-01,C3N-02784-03 C3N-02784.scRNA-Seq.R1.T C3N-02784 GBM scRNA-Seq tumor CPT0206000015 20200610_WUSTL_CPT0206000015_TACTCTTC-CCTGTGCG-GGACACGT-ATGAGAAA_S5_L003_R1_001.fastq.gz 10247839581 FASTQ NA 82f470cd-a7c4-46dd-ad24-f6ef6ac2fb1f 5be38469d5926812ffec926b76323ee0 NA Primary Tumor C3N-02784-01 C3N-02784.scRNA-Seq.R2.T C3N-02784 GBM scRNA-Seq tumor CPT0206000015 20200610_WUSTL_CPT0206000015_TACTCTTC-CCTGTGCG-GGACACGT-ATGAGAAA_S5_L003_R2_001.fastq.gz 24870065483 FASTQ NA 51ff95f6-0a5c-495d-b26c-10cf4f66e95f ed342986a988a6bb271887bd53cadbb4 NA Primary Tumor C3N-02784-01 -C3N-02784.scRNA-Seq.T.hg38 C3N-02784 GBM scRNA-Seq tumor CPT0206000015 possorted_genome_bam.bam 39640887850 BAM NA 37e3ecd0-b3cd-4b1c-b59f-1f1fc9d10cbf 870a66d416eb82c8df2cccb417b50278 hg38 Primary Tumor C3N-02784-01 +C3N-02784.scRNA-Seq.T.hg38 C3N-02784 GBM scRNA-Seq tumor CPT0206000015 possorted_genome_bam.bam 27855697509 BAM NA 4cc00a1b-6ee4-4520-a76e-94ea33e09889 de94c65f41e9cb0b966922dbf278eea2 hg38 Primary Tumor C3N-02784-01 C3N-02784.WGS.N C3N-02784 GBM WGS blood_normal CPT0206060002 CPT0206060002.WholeGenome.RP-1303.bam 59440566323 BAM NA 31df1c04-e901-4b2d-ad1e-19f9f7f6589d ae32b9769b0b50daa23eb6e2ff1b3c43 hg19 Blood Derived Normal C3N-02784-71 C3N-02784.WGS.N.hg38 C3N-02784 GBM WGS blood_normal CPT0206060002 7c5eb1a4-b218-4654-9c46-76f044f69aee_wgs_gdc_realn.bam 86077990346 BAM NA acc13c17-4844-4ecd-88bd-a087db0726d9 c5e0df33a15c810f5d74aa4f213cef14 hg38 Blood Derived Normal C3N-02784-71 C3N-02784.WGS.T C3N-02784 GBM WGS tumor CPT0206000007 CPT0206000007.WholeGenome.RP-1303.bam 57951905117 BAM NA 798426df-aa4e-405b-b0df-168c71d52d00 a5b62bcfeb86fa59d1bfc52121ee7c45 hg19 Primary Tumor C3N-02784-01,C3N-02784-03 @@ -34249,7 +34292,7 @@ C3N-03184.RNA-Seq.R2.T C3N-03184 GBM RNA-Seq tumor CPT0206780006 181207_UNC32-K0 C3N-03184.RNA-Seq.transcriptome.T.hg38 C3N-03184 GBM RNA-Seq tumor CPT0206780006 77ee6d80-f2f8-4fc1-ad07-f7446e46764d.rna_seq.transcriptome.gdc_realn.bam 10497646301 BAM transcriptome b7566257-b4e4-400f-ab8d-beb68ea1385d 9181e9efaf055f6e83ffdc14d3f50508 hg38 Primary Tumor C3N-03184-02 C3N-03184.scRNA-Seq.R1.T C3N-03184 GBM scRNA-Seq tumor CPT0206770002 20191030_WUSTL_CPT0206770002_CCTAGACC-ATCTCTGT-TAGCTCTA-GGAGAGAG_S2_L004_R1_001.fastq.gz 10712601524 FASTQ NA 8f1fa942-150a-4023-b33a-ae9a9ea3ef79 99689b02ff750265f06090c65a96738d NA Primary Tumor C3N-03184-02 C3N-03184.scRNA-Seq.R2.T C3N-03184 GBM scRNA-Seq tumor CPT0206770002 20191030_WUSTL_CPT0206770002_CCTAGACC-ATCTCTGT-TAGCTCTA-GGAGAGAG_S2_L004_R2_001.fastq.gz 24360054740 FASTQ NA fe6efe38-2f32-4fef-9ce3-6cd4e9de3744 ba4224ec64bcbcd50ce56ac2871bcff2 NA Primary Tumor C3N-03184-02 -C3N-03184.scRNA-Seq.T.hg38 C3N-03184 GBM scRNA-Seq tumor CPT0206770002 possorted_genome_bam.bam 60211385485 BAM NA 75ac6a92-db65-46e0-bbcb-30dc8bf29b5e 2434f4eeee37cc42726724f825caae5a hg38 Primary Tumor C3N-03184-02 +C3N-03184.scRNA-Seq.T.hg38 C3N-03184 GBM scRNA-Seq tumor CPT0206770002 possorted_genome_bam.bam 27748877601 BAM NA 81af3f7d-1e43-47cb-88f9-07fdb39b7cd3 6fc463f522df04b5194fd0fb91c8b836 hg38 Primary Tumor C3N-03184-02 C3N-03184.WGS.N C3N-03184 GBM WGS blood_normal CPT0206830002 CPT0206830002.WholeGenome.RP-1303.bam 60404443966 BAM NA 6901c856-f491-4b7d-84af-604abea50477 57112c05adb29bb0b38134929f1fe591 hg19 Blood Derived Normal C3N-03184-71 C3N-03184.WGS.N.hg38 C3N-03184 GBM WGS blood_normal CPT0206830002 e5a7f2ee-15f8-4c5b-8ea8-c0f57ab8f65d_wgs_gdc_realn.bam 90129244059 BAM NA 6555a211-793e-44aa-8a93-5e82c66f40b4 bc146fd46f8af5a813c0cddeeb674f04 hg38 Blood Derived Normal C3N-03184-71 C3N-03184.WGS.T C3N-03184 GBM WGS tumor CPT0206780009 CPT0206780009.WholeGenome.RP-1303.bam 58888584690 BAM NA b7a6fccb-02b4-471e-93fb-331c1a859cf4 016a34d8955476cbb8936e821de84493 hg19 Primary Tumor C3N-03184-02 @@ -34269,7 +34312,7 @@ C3N-03186.RNA-Seq.R2.T C3N-03186 GBM RNA-Seq tumor CPT0206880006 181207_UNC32-K0 C3N-03186.RNA-Seq.transcriptome.T.hg38 C3N-03186 GBM RNA-Seq tumor CPT0206880006 25121daf-8087-42a4-a445-9fe2557431e0.rna_seq.transcriptome.gdc_realn.bam 10416378361 BAM transcriptome a4de6238-89a7-4daa-bb0c-179f2d64ab53 f7c85c4bf1506fca693386a96281fe92 hg38 Primary Tumor C3N-03186-01 C3N-03186.scRNA-Seq.R1.T C3N-03186 GBM scRNA-Seq tumor CPT0206880004 20200622_WUSTL_CPT0206880004_TCTCAGTG-GAGACTAT-CGCTTAGC-ATAGGCCA_S4_L001_R1_001.fastq.gz 10703766166 FASTQ NA 9df1cb87-32b3-4477-982b-9af04c3f4ccd 047d7739b6a6ebeface55d18c487b02a NA Primary Tumor C3N-03186-01 C3N-03186.scRNA-Seq.R2.T C3N-03186 GBM scRNA-Seq tumor CPT0206880004 20200622_WUSTL_CPT0206880004_TCTCAGTG-GAGACTAT-CGCTTAGC-ATAGGCCA_S4_L001_R2_001.fastq.gz 24638505648 FASTQ NA 25dd41d3-2be1-46c4-9630-443e70d3fbd3 fd3d03b1ea01950154acb863c658a6d4 NA Primary Tumor C3N-03186-01 -C3N-03186.scRNA-Seq.T.hg38 C3N-03186 GBM scRNA-Seq tumor CPT0206880004 possorted_genome_bam.bam 30582400559 BAM NA d4cffdf0-be27-4506-a713-2a39c9e01ed3 52aa69de4e7e901a53516a95ed04229c hg38 Primary Tumor C3N-03186-01 +C3N-03186.scRNA-Seq.T.hg38 C3N-03186 GBM scRNA-Seq tumor CPT0206880004 possorted_genome_bam.bam 24794207809 BAM NA cb7f2b9f-026c-474c-8597-d255f446da18 a8d615564506880e1594a12ed51befc1 hg38 Primary Tumor C3N-03186-01 C3N-03186.WGS.N C3N-03186 GBM WGS blood_normal CPT0206940002 CPT0206940002.WholeGenome.RP-1303.bam 65040645125 BAM NA 9f5d33fa-acdf-44fe-b14f-ece6991eb1bf 155895ce934cf3f649541e1a26eba8d7 hg19 Blood Derived Normal C3N-03186-31 C3N-03186.WGS.N.hg38 C3N-03186 GBM WGS blood_normal CPT0206940002 6e67dba7-0c71-4c45-9d0b-d93b5a185421_wgs_gdc_realn.bam 97634516512 BAM NA b30947ce-f48f-4950-a79b-c14d5b5f8260 528850f8287a1fb0c30349d3bc5ef967 hg38 Blood Derived Normal C3N-03186-31 C3N-03186.WGS.T C3N-03186 GBM WGS tumor CPT0206880009 CPT0206880009.WholeGenome.RP-1303.bam 77551110154 BAM NA 16fc5973-a920-4c24-ba52-bf1003b15320 0162d841a527b869868fa690015b111d hg19 Primary Tumor C3N-03186-01 @@ -34289,7 +34332,7 @@ C3N-03188.RNA-Seq.R2.T C3N-03188 GBM RNA-Seq tumor CPT0207030013 180918_UNC31-K0 C3N-03188.RNA-Seq.transcriptome.T.hg38 C3N-03188 GBM RNA-Seq tumor CPT0207030013 bbf9ac2f-d194-4299-ba75-53a84cbe4950.rna_seq.transcriptome.gdc_realn.bam 10378849587 BAM transcriptome f2470f17-e00c-4376-adfc-9b2a59d8ef08 5f98711717fed3307f1f8efabef54d57 hg38 Primary Tumor C3N-03188-02 C3N-03188.scRNA-Seq.R1.T C3N-03188 GBM scRNA-Seq tumor CPT0207030018 20191113_WUSTL_CPT0207030018_CTAGGTGA-TCGTTCAG-AGCCAATT-GATACGCC_S4_L003_R1_001.fastq.gz 13652430515 FASTQ NA 50bf9d3e-e44e-43e2-ac84-82d515902fff d8907a5af8b8102c9c7d7c663f4c3d2d NA Primary Tumor C3N-03188-02 C3N-03188.scRNA-Seq.R2.T C3N-03188 GBM scRNA-Seq tumor CPT0207030018 20191113_WUSTL_CPT0207030018_CTAGGTGA-TCGTTCAG-AGCCAATT-GATACGCC_S4_L003_R2_001.fastq.gz 33711334298 FASTQ NA 4839997b-24aa-4d29-939a-7bf9c2cb44c6 ac48fd16a0effaab4ea46ad0fc5e0020 NA Primary Tumor C3N-03188-02 -C3N-03188.scRNA-Seq.T.hg38 C3N-03188 GBM scRNA-Seq tumor CPT0207030018 possorted_genome_bam.bam 53066291606 BAM NA bb645583-1e6e-464e-ac93-8220ac3646af 7f731b6843c1e18dd489650e5a583982 hg38 Primary Tumor C3N-03188-02 +C3N-03188.scRNA-Seq.T.hg38 C3N-03188 GBM scRNA-Seq tumor CPT0207030018 possorted_genome_bam.bam 40023051443 BAM NA a06d7756-5df6-475c-89bd-bd1dd1555104 c23494e630462c2d3fd9e74451e4b181 hg38 Primary Tumor C3N-03188-02 C3N-03188.WGS.N C3N-03188 GBM WGS blood_normal CPT0207080002 CPT0207080002.WholeGenome.RP-1303.bam 53507871721 BAM NA cf3b8ee2-a68e-4b14-a0ef-5a49db68a16d 501732d96e90137806e96abd2132ee91 hg19 Blood Derived Normal C3N-03188-31 C3N-03188.WGS.N.hg38 C3N-03188 GBM WGS blood_normal CPT0207080002 d018b972-f90c-490c-a9f4-da37c18224e0_wgs_gdc_realn.bam 79411908145 BAM NA b735008d-191e-43a9-9185-e6385b53018c cdc78e6518e4c7403b05d8954beb71c2 hg38 Blood Derived Normal C3N-03188-31 C3N-03188.WGS.T C3N-03188 GBM WGS tumor CPT0207030009 CPT0207030009.WholeGenome.RP-1303.bam 59348737026 BAM NA b7639cf2-56e0-49c7-af72-b4aa1b59f60f 5712d3bc068fbf6b6a2b749ddfb99cc4 hg19 Primary Tumor C3N-03188-02 @@ -36590,29 +36633,29 @@ C3N-04100.WXS.T C3N-04100 GBM WXS tumor CPT0285590006 CPT0285590006.WholeExome.R C3N-04100.WXS.T.hg38 C3N-04100 GBM WXS tumor CPT0285590006 60fd69ce-3aa4-48fc-8ee0-095e68c64b9e_wxs_gdc_realn.bam 30013568056 BAM NA 645e357e-7bdf-4136-812c-e02db7f7fab0 c58cee09d0ac0a841dab9612a653bfc9 hg38 Primary Tumor C3N-04100-02 C3N-04113.MethArray.Green.T C3N-04113 GBM Methylation Array tumor CPT0285620006 204367490093_R03C01_Grn.idat 13677900 IDAT Green 67d72c45-fa2d-4cad-8582-0f19edbe887f d1e011e14c85077bdb8822de07f06e55 NA Primary Tumor C3N-04113-01 C3N-04113.MethArray.Green.T C3N-04113 GBM Methylation Array tumor CPT0285620006 204930630109_R07C01_Grn.idat 13677885 IDAT Green a6c818e8-81f4-426d-bffa-0955e283e20c 1c00ec0a93169324b058c0f2797c8d29 NA Primary Tumor C3N-04113-01 -C3N-04113.MethArray.Green.T.UNK_o25vvXX C3N-04113 GBM Methylation Array tumor CPT0285640006 205555390176_R05C01_Grn.idat 13677955 IDAT Green 75e8ad59-7e4e-4212-9e10-cc1650e4d469 a6ad99dea8e0330c9d418ed888135da5 NA Primary Tumor C3N-04113-03 sample_tag=UNK_o25vvXX Duplicate item: Replacement DNA Aliquot +C3N-04113.MethArray.Green.T.RDNA_o25vvXX C3N-04113 GBM Methylation Array tumor CPT0285640006 205555390176_R05C01_Grn.idat 13677955 IDAT Green 75e8ad59-7e4e-4212-9e10-cc1650e4d469 a6ad99dea8e0330c9d418ed888135da5 NA Primary Tumor C3N-04113-03 sample_tag=RDNA_o25vvXX Duplicate item: Replacement DNA Aliquot C3N-04113.MethArray.Red.T C3N-04113 GBM Methylation Array tumor CPT0285620006 204367490093_R03C01_Red.idat 13677900 IDAT Red fa6fcda1-b93e-4900-92fb-885e8ade614b 26e8d89e983ad6a3cb27385e0d70def6 NA Primary Tumor C3N-04113-01 C3N-04113.MethArray.Red.T C3N-04113 GBM Methylation Array tumor CPT0285620006 204930630109_R07C01_Red.idat 13677885 IDAT Red df28f441-dc30-48e2-9879-7505d6adc086 0bd789f711f2878a10c8767c4954235f NA Primary Tumor C3N-04113-01 -C3N-04113.MethArray.Red.T.UNK_o25vvXX C3N-04113 GBM Methylation Array tumor CPT0285640006 205555390176_R05C01_Red.idat 13677955 IDAT Red 01e08033-624d-46a3-a4de-b19d5a804ee5 05507d1faaaa0b674c092bbe4f943940 NA Primary Tumor C3N-04113-03 sample_tag=UNK_o25vvXX Duplicate item: Replacement DNA Aliquot +C3N-04113.MethArray.Red.T.RDNA_o25vvXX C3N-04113 GBM Methylation Array tumor CPT0285640006 205555390176_R05C01_Red.idat 13677955 IDAT Red 01e08033-624d-46a3-a4de-b19d5a804ee5 05507d1faaaa0b674c092bbe4f943940 NA Primary Tumor C3N-04113-03 sample_tag=RDNA_o25vvXX Duplicate item: Replacement DNA Aliquot C3N-04113.miRNA-Seq.T C3N-04113 GBM miRNA-Seq tumor CPT0285620009 200403_UNC31-K00269_0274_AHCF7GBBXY_TACAGC_S19_L001_R1_001.unaln.bam 270137881 BAM NA a7fa3f22-13ef-477e-9c36-96b8bb785f93 6baf863fd9d32accf03d39deafaa653b NA Primary Tumor C3N-04113-01 C3N-04113.miRNA-Seq.T.hg38 C3N-04113 GBM miRNA-Seq tumor CPT0285620009 cea639d4-1aa7-4d7c-b599-0fea38b57497_mirnaseq_gdc_realn.bam 297734367 BAM NA 0e0a8eff-4408-44a7-a764-fad48d8c32f8 df910efdda6fb5bbc29664dbeaa8ed7d hg38 Primary Tumor C3N-04113-01 -C3N-04113.miRNA-Seq.T.UNK_rk3EEVp C3N-04113 GBM miRNA-Seq tumor CPT0285640009 210702_UNC32-K00270_0289_AHKJ22BBXY_CTTGTA_S10_L005_R1_001.unaln.bam 144320274 BAM NA 10503913-3b14-490a-a103-7941a0d25454 dfa01d539dc19fdc75abadb6b3a98984 NA Primary Tumor C3N-04113-03 sample_tag=UNK_rk3EEVp Duplicate item: Replacement RNA Aliquot -C3N-04113.miRNA-Seq.T.UNK_rk3EEVp C3N-04113 GBM miRNA-Seq tumor CPT0285640009 210817_UNC31-K00269_0302_AHLCTHBBXY_CTTGTA_S28_L003_R1_001.unaln.bam 94443326 BAM NA 8c9c36e0-88de-4c2a-b050-381af131c584 231b766d5cee0439829924fcb672c53c NA Primary Tumor C3N-04113-03 sample_tag=UNK_rk3EEVp Duplicate item: Replacement RNA Aliquot +C3N-04113.miRNA-Seq.T.RRNA_rk3EEVp C3N-04113 GBM miRNA-Seq tumor CPT0285640009 210702_UNC32-K00270_0289_AHKJ22BBXY_CTTGTA_S10_L005_R1_001.unaln.bam 144320274 BAM NA 10503913-3b14-490a-a103-7941a0d25454 dfa01d539dc19fdc75abadb6b3a98984 NA Primary Tumor C3N-04113-03 sample_tag=RRNA_rk3EEVp Duplicate item: Replacement RNA Aliquot +C3N-04113.miRNA-Seq.T.RRNA_rk3EEVp C3N-04113 GBM miRNA-Seq tumor CPT0285640009 210817_UNC31-K00269_0302_AHLCTHBBXY_CTTGTA_S28_L003_R1_001.unaln.bam 94443326 BAM NA 8c9c36e0-88de-4c2a-b050-381af131c584 231b766d5cee0439829924fcb672c53c NA Primary Tumor C3N-04113-03 sample_tag=RRNA_rk3EEVp Duplicate item: Replacement RNA Aliquot C3N-04113.RNA-Seq.chimeric.T.hg38 C3N-04113 GBM RNA-Seq tumor CPT0285620009 61995342-294e-42a9-9617-9e9c4434f209.rna_seq.chimeric.gdc_realn.bam 30034866 BAM chimeric 39ee3002-d298-405f-8d2b-28c494d5fa16 c6aeaf751c275f83d66c2b59ab4b187f hg38 Primary Tumor C3N-04113-01 C3N-04113.RNA-Seq.genomic.T.hg38 C3N-04113 GBM RNA-Seq tumor CPT0285620009 61995342-294e-42a9-9617-9e9c4434f209.rna_seq.genomic.gdc_realn.bam 7256320457 BAM genomic d99876e3-bb14-47a6-b2d3-aea6816f4e0b d67a06ebfae175922cfa861cbee92a06 hg38 Primary Tumor C3N-04113-01 C3N-04113.RNA-Seq.R1.T C3N-04113 GBM RNA-Seq tumor CPT0285620009 200129_UNC31-K00269_0261_AHG2CLBBXY_AAGATACT-ACTTACAT_S3_L004_R1_001.fastq.gz 3523637381 FASTQ NA 9f0d3283-518d-4cbe-ac56-7f4cff984a77 2f081d269ba4839f78a1af74095b73b1 NA Primary Tumor C3N-04113-01 -C3N-04113.RNA-Seq.R1.T.UNK_rk3EEVp C3N-04113 GBM RNA-Seq tumor CPT0285640009 210615_UNC31-K00269_0299_BHLFTYBBXY_AGTACTCC-AACCTGTT_S75_L008_R1_001.fastq.gz 3959065989 FASTQ NA 69aa2a6b-6027-49f3-8e36-3103637b7cb1 f586ef1488c669bd02c714c1c2d03b51 NA Primary Tumor C3N-04113-03 sample_tag=UNK_rk3EEVp Duplicate item: Replacement RNA Aliquot +C3N-04113.RNA-Seq.R1.T.RRNA_rk3EEVp C3N-04113 GBM RNA-Seq tumor CPT0285640009 210615_UNC31-K00269_0299_BHLFTYBBXY_AGTACTCC-AACCTGTT_S75_L008_R1_001.fastq.gz 3959065989 FASTQ NA 69aa2a6b-6027-49f3-8e36-3103637b7cb1 f586ef1488c669bd02c714c1c2d03b51 NA Primary Tumor C3N-04113-03 sample_tag=RRNA_rk3EEVp Duplicate item: Replacement RNA Aliquot C3N-04113.RNA-Seq.R2.T C3N-04113 GBM RNA-Seq tumor CPT0285620009 200129_UNC31-K00269_0261_AHG2CLBBXY_AAGATACT-ACTTACAT_S3_L004_R2_001.fastq.gz 3851534424 FASTQ NA 1ce40d45-b6a8-43a9-8aa1-82b4ed1f4a95 99f25205d09e2947c289dc0c34d3a98a NA Primary Tumor C3N-04113-01 -C3N-04113.RNA-Seq.R2.T.UNK_rk3EEVp C3N-04113 GBM RNA-Seq tumor CPT0285640009 210615_UNC31-K00269_0299_BHLFTYBBXY_AGTACTCC-AACCTGTT_S75_L008_R2_001.fastq.gz 4395049863 FASTQ NA 57e66976-7cfd-4dc7-960f-61b01cf53055 73c04986bc63d9b19b1f402db7a33eba NA Primary Tumor C3N-04113-03 sample_tag=UNK_rk3EEVp Duplicate item: Replacement RNA Aliquot +C3N-04113.RNA-Seq.R2.T.RRNA_rk3EEVp C3N-04113 GBM RNA-Seq tumor CPT0285640009 210615_UNC31-K00269_0299_BHLFTYBBXY_AGTACTCC-AACCTGTT_S75_L008_R2_001.fastq.gz 4395049863 FASTQ NA 57e66976-7cfd-4dc7-960f-61b01cf53055 73c04986bc63d9b19b1f402db7a33eba NA Primary Tumor C3N-04113-03 sample_tag=RRNA_rk3EEVp Duplicate item: Replacement RNA Aliquot C3N-04113.RNA-Seq.transcriptome.T.hg38 C3N-04113 GBM RNA-Seq tumor CPT0285620009 61995342-294e-42a9-9617-9e9c4434f209.rna_seq.transcriptome.gdc_realn.bam 7020351587 BAM transcriptome 3c444484-2b24-44be-8407-009dd500381b 0ffac080e10102c7c34b9709f9d77492 hg38 Primary Tumor C3N-04113-01 C3N-04113.WGS.N C3N-04113 GBM WGS blood_normal CPT0285650002 CPT0285650002.WholeGenome.RP-2158.bam 29591689611 BAM NA 88491985-2778-4634-b8ed-32a17626ad72 c9b4212007523ca3edf8027e82338068 hg19 Blood Derived Normal C3N-04113-31 C3N-04113.WGS.N.hg38 C3N-04113 GBM WGS blood_normal CPT0285650002 48f76814-e8a6-4689-ae08-37a3da4fbccf_wgs_gdc_realn.bam 91183903789 BAM NA 8a56868d-6456-4125-bd94-c89e0afdaeff fb7343f4e4926483b47990f66b663bd0 hg38 Blood Derived Normal C3N-04113-31 C3N-04113.WGS.T C3N-04113 GBM WGS tumor CPT0285620006 CPT0285620006.WholeGenome.RP-2158.bam 27745088896 BAM NA 80115334-9ece-488f-b05f-03c26f207441 a09f615b04e741e7315b3f5d8bcfd439 hg19 Primary Tumor C3N-04113-01 C3N-04113.WGS.T.hg38 C3N-04113 GBM WGS tumor CPT0285620006 5ad1a3d2-831b-405d-b7d9-7e1728337e25_wgs_gdc_realn.bam 81872292228 BAM NA b4fdd133-7457-4a99-9621-b06aad5f7def 54953303ba85b449d8be407f0aaf75a4 hg38 Primary Tumor C3N-04113-01 -C3N-04113.WGS.T.UNK_o25vvXX C3N-04113 GBM WGS tumor CPT0285640006 CPT0285640006.WholeGenome.RP-2158.bam 28355549625 BAM NA ab315250-4cd5-431b-84e7-483d1db2b003 3c8d11f094f03f4df52ac934bcab5db3 hg19 Primary Tumor C3N-04113-03 sample_tag=UNK_o25vvXX Duplicate item: Replacement DNA Aliquot +C3N-04113.WGS.T.RDNA_o25vvXX C3N-04113 GBM WGS tumor CPT0285640006 CPT0285640006.WholeGenome.RP-2158.bam 28355549625 BAM NA ab315250-4cd5-431b-84e7-483d1db2b003 3c8d11f094f03f4df52ac934bcab5db3 hg19 Primary Tumor C3N-04113-03 sample_tag=RDNA_o25vvXX Duplicate item: Replacement DNA Aliquot C3N-04113.WXS.N C3N-04113 GBM WXS blood_normal CPT0285650002 CPT0285650002.WholeExome.RP-1303.bam 29786208134 BAM NA f0c8c00e-1b52-496e-9eaf-09da2938df9b 2d27afb21276d6f25ebad2c1b91406eb hg19 Blood Derived Normal C3N-04113-31 C3N-04113.WXS.N.hg38 C3N-04113 GBM WXS blood_normal CPT0285650002 48f76814-e8a6-4689-ae08-37a3da4fbccf_wxs_gdc_realn.bam 40739124735 BAM NA a4e8f80c-7798-4472-9e9d-8a6cb4bfe9c5 34464320bcf13f1ad7f86e846160f5e5 hg38 Blood Derived Normal C3N-04113-31 -C3N-04113.WXS.T.UNK_o25vvXX C3N-04113 GBM WXS tumor CPT0285640006 CPT0285640006.WholeExome.RP-1303.bam 23107973738 BAM NA 96d34906-3b49-43f7-b624-7575ad5611ec c2f0d49eea3427fd0f075fab674f96f2 hg19 Primary Tumor C3N-04113-03 sample_tag=UNK_o25vvXX Duplicate item: Replacement DNA Aliquot +C3N-04113.WXS.T.RDNA_o25vvXX C3N-04113 GBM WXS tumor CPT0285640006 CPT0285640006.WholeExome.RP-1303.bam 23107973738 BAM NA 96d34906-3b49-43f7-b624-7575ad5611ec c2f0d49eea3427fd0f075fab674f96f2 hg19 Primary Tumor C3N-04113-03 sample_tag=RDNA_o25vvXX Duplicate item: Replacement DNA Aliquot C3N-04119.MethArray.Green.A C3N-04119 PDA Methylation Array tissue_normal CPT0237920007 203273630048_R07C01_Grn.idat 13676231 IDAT Green 92c2f356-545e-4080-8b2a-df898113c2ee ab88e89c17d3c712f4f54cd23639f02d NA Solid Tissue Normal C3N-04119-03 C3N-04119.MethArray.Green.T C3N-04119 PDA Methylation Array tumor CPT0237910007 203561620008_R01C01_Grn.idat 13676236 IDAT Green efc75b36-c1da-4fa7-948f-a798a4838b5a 1ad15d30a97dd35e2791a5eb80f8e5d7 NA Primary Tumor C3N-04119-02 C3N-04119.MethArray.Red.A C3N-04119 PDA Methylation Array tissue_normal CPT0237920007 203273630048_R07C01_Red.idat 13676231 IDAT Red 03788187-1968-4a9d-8159-8cb73bbaaddd b00f902b97796d104ffa1093ef3253be NA Solid Tissue Normal C3N-04119-03 @@ -37848,9 +37891,11 @@ C3N-05085.RNA-Seq.R2.A C3N-05085 LSCC RNA-Seq tissue_normal CPT0313370006 201103 C3N-05085.RNA-Seq.R2.T C3N-05085 LSCC RNA-Seq tumor CPT0384250009 201103_UNC31-K00269_0292_AHJ772BBXY_CTCTCGTC-TATAACCT_S26_L007_R2_001.fastq.gz 4829793715 FASTQ NA 75d4f8b1-11c7-4a0f-beac-ba3ab8286040 1582dc7cddc90b715ac6b7b9b752b620 NA Primary Tumor C3N-05085-08 C3N-05085.RNA-Seq.transcriptome.A.hg38 C3N-05085 LSCC RNA-Seq tissue_normal CPT0313370006 e1b990d6-8ad2-440b-b28e-ebe8c8506da4.rna_seq.transcriptome.gdc_realn.bam 8180973134 BAM transcriptome ca83d9a4-37ee-4132-99f6-c6e532ff0e34 495a6140112aa9c6531a3ad052c98223 hg38 Solid Tissue Normal C3N-05085-10 C3N-05085.RNA-Seq.transcriptome.T.hg38 C3N-05085 LSCC RNA-Seq tumor CPT0384250009 7eee2b53-2f7b-4606-b4b5-9fa380bb08ff.rna_seq.transcriptome.gdc_realn.bam 11130397782 BAM transcriptome b4f27b74-7c86-4722-9e74-4f46cf656602 1a75e24e752836fc261eadf4be245242 hg38 Primary Tumor C3N-05085-08 -C3N-05085.WGS.N.UNK_k5lr7N6 C3N-05085 LSCC WGS blood_normal CPT0405320002 CPT0405320002.WholeGenome.RP-2158.bam 25924162058 BAM NA 1d116097-e964-4e1a-8137-0bc7c2d82b3b c1fe3ef5b481e0439096dec04de52c78 hg19 Blood Derived Normal C3N-05085-71 sample_tag=UNK_k5lr7N6 Duplicate item: Replacement DNA Aliquot +C3N-05085.WGS.N.RDNA_k5lr7N6 C3N-05085 LSCC WGS blood_normal CPT0405320002 CPT0405320002.WholeGenome.RP-2158.bam 25924162058 BAM NA 1d116097-e964-4e1a-8137-0bc7c2d82b3b c1fe3ef5b481e0439096dec04de52c78 hg19 Blood Derived Normal C3N-05085-71 sample_tag=RDNA_k5lr7N6 Duplicate item: Replacement DNA Aliquot +C3N-05085.WGS.T C3N-05085 LSCC WGS tumor CPT0384250006 CPT0384250006.WholeGenome.RP-2158.bam 21211133335 BAM NA 412d0c18-22a9-4147-8e19-a25d81f8c0ae 762a2a11059fd33a495ac7f242c50247 hg19 Primary Tumor C3N-05085-08 C3N-05085.WXS.A C3N-05085 LSCC WXS tissue_normal CPT0313370009 CPT0313370009.WholeExome.RP-1303.bam 21481632964 BAM NA 34e0b32d-349d-404d-a76d-4d4ed7a903a7 86cede8f1fe10904fe4b708d1b1f643f hg19 Solid Tissue Normal C3N-05085-10 -C3N-05085.WXS.N.UNK_k5lr7N6 C3N-05085 LSCC WXS blood_normal CPT0405320002 CPT0405320002.WholeExome.RP-1303.bam 20178949836 BAM NA 3adc4457-fa35-48a2-b840-fb8eaf8896be 40296d7290a7bcb9012738d76b39df8d hg19 Blood Derived Normal C3N-05085-71 sample_tag=UNK_k5lr7N6 Duplicate item: Replacement DNA Aliquot +C3N-05085.WXS.N.RDNA_k5lr7N6 C3N-05085 LSCC WXS blood_normal CPT0405320002 CPT0405320002.WholeExome.RP-1303.bam 20178949836 BAM NA 3adc4457-fa35-48a2-b840-fb8eaf8896be 40296d7290a7bcb9012738d76b39df8d hg19 Blood Derived Normal C3N-05085-71 sample_tag=RDNA_k5lr7N6 Duplicate item: Replacement DNA Aliquot +C3N-05085.WXS.T C3N-05085 LSCC WXS tumor CPT0384250006 CPT0384250006.WholeExome.RP-1303.bam 18477809952 BAM NA 38996dd7-ff1b-4837-a18f-4d15c318f6a3 ae0663dd14825e5ca0f5c8613c5e333a hg19 Primary Tumor C3N-05085-08 C3N-05093.RNA-Seq.R1.T C3N-05093 HNSCC RNA-Seq tumor CPT0354800001 20210729_P3_C5_WB7988-Plate3_S29_R1_001.fastq.gz 4607138936 FASTQ NA fc8f4596-2078-4645-b283-341feb6454ec 4e3f0ec226c40496c00e83856dfe59ce NA Primary Tumor C3N-05093-12 C3N-05093.RNA-Seq.R2.T C3N-05093 HNSCC RNA-Seq tumor CPT0354800001 20210729_P3_C5_WB7988-Plate3_S29_R2_001.fastq.gz 4716010063 FASTQ NA 548edcb4-222d-4c8b-aa4c-f47f3dd7c251 4e18f91c2542417e6e4c60b96d52dd75 NA Primary Tumor C3N-05093-12 C3N-05097.RNA-Seq.R1.T C3N-05097 HNSCC RNA-Seq tumor CPT0354820001 20210729_P3_D5_WB7988-Plate3_S41_R1_001.fastq.gz 5042843421 FASTQ NA bb58cb9f-4672-4053-ace5-6fe7465c8b95 bdc69d85697b37cac140769f2c33ab8c NA Primary Tumor C3N-05097-11 @@ -38108,7 +38153,11 @@ C464694.MethArray.Red.T.ADNA_7319b796 C464694 GBM Methylation Array tumor 7316UP C464694.miRNA-Seq.T C464694 GBM miRNA-Seq tumor 7316UP-1220-1104806 210817_UNC31-K00269_0302_AHLCTHBBXY_GTGAAA_S19_L003_R1_001.unaln.bam 369818581 BAM NA c199d8d6-379a-4af8-a9d4-ed6e4b614fb0 ea112e1b36fed716827ebd89f58efe16 NA Primary Tumor 1104806 C464694.RNA-Seq.R1.T C464694 GBM RNA-Seq tumor 7316UP-1220-1104806 210713_UNC32-K00270_0291_AHLK5VBBXY_AATCCGGA-CTACAGTT_S17_L005_R1_001.fastq.gz 4211420045 FASTQ NA e953a951-3a91-442e-ad44-8ebde2357ba1 5233571714b1ad08855987a0e21637bf NA Primary Tumor 1104806 C464694.RNA-Seq.R2.T C464694 GBM RNA-Seq tumor 7316UP-1220-1104806 210713_UNC32-K00270_0291_AHLK5VBBXY_AATCCGGA-CTACAGTT_S17_L005_R2_001.fastq.gz 4535404399 FASTQ NA dfd4d083-3696-4f1a-9a7b-9613cb26d82d 40639d47dfecbf5ca2bf8b47b9bb8e1a NA Primary Tumor 1104806 +C464694.WGS.N C464694 GBM WGS blood_normal 7316UP-1220-1105273 7316UP-1220-1105273.WholeGenome.RP-2158.bam 58056642254 BAM NA 8de7ce32-b53a-4bd8-83f9-e8584ffa7bd4 5c2d8a5c6b7e42314c9f21c2f30ebe68 hg19 Blood Derived Normal 1105273 +C464694.WGS.R C464694 GBM WGS recurrent_tumor 7316UP-2165 7316UP-2165.WholeGenome.RP-2158.bam 59730720406 BAM NA 49907439-eaca-4bc0-bb26-e5cf4ef4b055 824010f782891f63355558dcd5d5afe4 hg19 Recurrent Tumor SM-JU33G +C464694.WGS.T.ADNA_7319b796 C464694 GBM WGS tumor 7316UP-1220 7316UP-1220.WholeGenome.RP-2158.bam 50906731344 BAM NA 2cfe9f7d-a40a-4b0d-92de-8dd2e369dfe9 5839ad43a00ff69295864978d1bfba47 hg19 Primary Tumor SM-JU334 sample_tag=ADNA_7319b796 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C464694.WXS.N C464694 GBM WXS blood_normal 7316UP-1220-1105273 7316UP-1220-1105273.WholeExome.RP-1303.bam 34171762075 BAM NA ae674995-a428-4617-a594-a46bd0a14690 d4813def900172a4870d1e6c6d0701c9 hg19 Blood Derived Normal 1105273 +C464694.WXS.R C464694 GBM WXS recurrent_tumor 7316UP-2165 7316UP-2165.WholeExome.RP-1303.bam 21435410858 BAM NA e065a5af-faad-4155-aebc-d191be6cc1fa 3e72c6c922523d3be5cb85fd89bcc47e hg19 Recurrent Tumor SM-JU33G C464694.WXS.T.ADNA_7319b796 C464694 GBM WXS tumor 7316UP-1220 7316UP-1220.WholeExome.RP-1303.bam 22942475909 BAM NA 1b1eb9c9-e46d-4867-8ca9-7b90245fb6ac 023d4b7af206ae23cf22b1cef24f44e6 hg19 Primary Tumor SM-JU334 sample_tag=ADNA_7319b796 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C464694.WXS.T C464694 GBM WXS tumor 7316UP-1220-1105271 7316UP-1220-1105271.WholeExome.RP-1303.bam 23752991278 BAM NA 680f0ed2-f4b3-4831-afb6-1758fa985db4 188d88b682c63fd90a1737d0a62f4710 hg19 Primary Tumor 1105271 C524103.MethArray.Green.R.ADNA_d3942a4a C524103 GBM Methylation Array recurrent_tumor 7316UP-1352 205555380005_R01C01_Grn.idat 13677900 IDAT Green 56256210-86b4-458e-b7b2-b827e6be87d4 3e939bf3a12cd6f231f3c0cc6b3d5d48 NA Recurrent Tumor SM-JU345 sample_tag=ADNA_d3942a4a Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot @@ -38122,6 +38171,7 @@ C524103.RNA-Seq.R1.T C524103 GBM RNA-Seq tumor 7316UP-1302-1104811 210713_UNC32- C524103.RNA-Seq.R2.R C524103 GBM RNA-Seq recurrent_tumor 7316UP-1352-1104794 210811_UNC31-K00269_0301_AHLLC5BBXY_CATAATAC-TTCTAACG_S18_L005_R2_001.fastq.gz 3112261192 FASTQ NA 1c2a8eae-a280-4bda-8053-bd1f73695d64 e28ce306b4b78cb6397887d886fce547 NA Recurrent Tumor 1104794 C524103.RNA-Seq.R2.T C524103 GBM RNA-Seq tumor 7316UP-1302-1104811 210713_UNC32-K00270_0291_AHLK5VBBXY_GCTTGTCA-GAACATAC_S23_L006_R2_001.fastq.gz 3472543146 FASTQ NA bbbc3545-1937-4afe-9d74-28e653c9f64d c76216a3140723e8a1bc386bfda0c766 NA Primary Tumor 1104811 C524103.WGS.N C524103 GBM WGS blood_normal 7316UP-1302-1105274 7316UP-1302-1105274.WholeGenome.RP-2158.bam 48734475668 BAM NA 19ffaaad-e881-46e2-9a11-aecc70e586e9 26e89fab98de5e8d3edf3405a9444fef hg19 Blood Derived Normal 1105274 +C524103.WGS.R.ADNA_d3942a4a C524103 GBM WGS recurrent_tumor 7316UP-1352 7316UP-1352.WholeGenome.RP-2158.bam 59412790773 BAM NA 2806f70f-3e38-44d6-9b0a-fde23338695e e7cfeb715ac64f4da7a9af13eef31124 hg19 Recurrent Tumor SM-JU345 sample_tag=ADNA_d3942a4a Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C524103.WGS.R C524103 GBM WGS recurrent_tumor 7316UP-1352-1105258 7316UP-1352-1105258.WholeGenome.RP-2158.bam 42916365920 BAM NA d25caa5c-4a24-45b8-8a75-10961ce9a232 4eb9b6ec7ff3656a7aed711fe6811069 hg19 Recurrent Tumor 1105258 C524103.WGS.T.ADNA_aee3de0f C524103 GBM WGS tumor 7316UP-1302 7316UP-1302.WholeGenome.RP-2158.bam 55198852451 BAM NA fd71f293-e7f0-4982-abd7-1a510b432306 040393ee5d9d38028577bacd01834b1f hg19 Primary Tumor SM-JU33S sample_tag=ADNA_aee3de0f Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C524103.WXS.N C524103 GBM WXS blood_normal 7316UP-1302-1105274 7316UP-1302-1105274.WholeExome.RP-1303.bam 27656891961 BAM NA 6eaa6ac2-44b3-4444-8c0d-a25e08e96978 d10ea801452598fef6324db044192b52 hg19 Blood Derived Normal 1105274 @@ -38134,9 +38184,12 @@ C621273.MethArray.Red.R.ADNA_58508890 C621273 GBM Methylation Array recurrent_tu C621273.miRNA-Seq.R C621273 GBM miRNA-Seq recurrent_tumor 7316UP-1614-1104792 210817_UNC31-K00269_0302_AHLCTHBBXY_ACAGTG_S22_L002_R1_001.unaln.bam 252996380 BAM NA f854017d-3c0d-4e9e-9095-1cd25132dc95 ca4397fd5e5e20411f44fd0006020d2e NA Recurrent Tumor 1104792 C621273.RNA-Seq.R1.R C621273 GBM RNA-Seq recurrent_tumor 7316UP-1614-1104792 210713_UNC32-K00270_0291_AHLK5VBBXY_TTGGACTC-GGAAGCAG_S20_L005_R1_001.fastq.gz 3601840825 FASTQ NA d2076f19-ae18-4b0f-90c0-009d307bac68 808a29599743ca7aa0440a43576f0c72 NA Recurrent Tumor 1104792 C621273.RNA-Seq.R2.R C621273 GBM RNA-Seq recurrent_tumor 7316UP-1614-1104792 210713_UNC32-K00270_0291_AHLK5VBBXY_TTGGACTC-GGAAGCAG_S20_L005_R2_001.fastq.gz 3751660538 FASTQ NA 208f978b-38ac-480f-ba8b-10672e7acf9d 5aaf59378fb20e4f5aaec8332e344222 NA Recurrent Tumor 1104792 +C621273.WGS.N C621273 GBM WGS blood_normal 7316UP-1614-1105218 7316UP-1614-1105218.WholeGenome.RP-2158.bam 45901157027 BAM NA b9e0471e-bc5a-4f34-97ff-974f2200a169 d5cc3843ccc56f0d3f496611d8315419 hg19 Blood Derived Normal 1105218 +C621273.WGS.R.ADNA_58508890 C621273 GBM WGS recurrent_tumor 7316UP-1614 7316UP-1614.WholeGenome.RP-2158.bam 49320276389 BAM NA 8b170826-9dea-4e38-89df-f3e04a145981 a267e6fe122f985c0e268f6907294475 hg19 Recurrent Tumor SM-JU34T sample_tag=ADNA_58508890 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C621273.WXS.N C621273 GBM WXS blood_normal 7316UP-1614-1105218 7316UP-1614-1105218.WholeExome.RP-1303.bam 20276203956 BAM NA 5d3d6d7b-cca4-4002-837e-bad86e3a1a18 2e091433109db1addf0c857446f74279 hg19 Blood Derived Normal 1105218 C621273.WXS.R.ADNA_58508890 C621273 GBM WXS recurrent_tumor 7316UP-1614 7316UP-1614.WholeExome.RP-1303.bam 22247999080 BAM NA 5743f054-3db2-40c1-8933-1e6cf7f0f395 f6715fec951aacd2d79117970bd01189 hg19 Recurrent Tumor SM-JU34T sample_tag=ADNA_58508890 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C621273.WXS.R C621273 GBM WXS recurrent_tumor 7316UP-1614-1105255 7316UP-1614-1105255.WholeExome.RP-1303.bam 25207962561 BAM NA 682ffb5a-c41d-481c-890e-4eadbc23fb23 f55e27e3724705428c4e861319df1d0f hg19 Recurrent Tumor 1105255 +C621273.WXS.T C621273 GBM WXS tumor 7316UP-1405 7316UP-1405.WholeExome.RP-1303.bam 32756236316 BAM NA 38c4cb2f-7d97-42b1-b7e5-7623a5c63d4c 52b9a5c73234edf7a6d3726c6d1c8f94 hg19 Primary Tumor SM-JU34H C685110.MethArray.Green.R.ADNA_1d688b70 C685110 GBM Methylation Array recurrent_tumor 7316UP-1883 205707890115_R01C01_Grn.idat 13677900 IDAT Green 6a427e14-fd5d-408b-9e77-5829b1b658c6 fa958101b2ec015965e541c6d1490a5c NA Recurrent Tumor SM-JU32S sample_tag=ADNA_1d688b70 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C685110.MethArray.Green.T.ADNA_224ab8cc C685110 GBM Methylation Array tumor 7316UP-1640 205705520087_R02C01_Grn.idat 13677900 IDAT Green 8517fdba-174e-4f15-8672-b5a9af370395 98ae986e4fd87ad603d438819ebb9ea6 NA Primary Tumor SM-JU356 sample_tag=ADNA_224ab8cc Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C685110.MethArray.Red.R.ADNA_1d688b70 C685110 GBM Methylation Array recurrent_tumor 7316UP-1883 205707890115_R01C01_Red.idat 13677900 IDAT Red 459707ac-4a86-4040-af4f-e26d1e5d17aa 8c445ad6b9fddc448039c0d7b34bd044 NA Recurrent Tumor SM-JU32S sample_tag=ADNA_1d688b70 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot @@ -38148,8 +38201,12 @@ C685110.RNA-Seq.R1.T C685110 GBM RNA-Seq tumor 7316UP-1640-1104801 210713_UNC32- C685110.RNA-Seq.R2.R C685110 GBM RNA-Seq recurrent_tumor 7316UP-1883-1104817 210713_UNC32-K00270_0291_AHLK5VBBXY_AGTTCAGG-CCAACAGA_S25_L007_R2_001.fastq.gz 3728372708 FASTQ NA 3652dfbb-4928-4636-9f9a-16069dc753ca c2b8a12c902c9d544c8f557f247faa15 NA Recurrent Tumor 1104817 C685110.RNA-Seq.R2.T C685110 GBM RNA-Seq tumor 7316UP-1640-1104801 210713_UNC32-K00270_0291_AHLK5VBBXY_AATGCCTC-TCGATCCA_S1_L001_R2_001.fastq.gz 4760327779 FASTQ NA 131ac7f3-1651-4192-83cb-6f9a97cbc981 bb48a6309cb400fb8d671dfdc2012903 NA Primary Tumor 1104801 C685110.WGS.N C685110 GBM WGS blood_normal 7316UP-1640-1105277 7316UP-1640-1105277.WholeGenome.RP-2158.bam 46238585989 BAM NA fbea3bb4-541a-4972-ac52-526e12b87ed2 77edcf03df4527c3a8be2a3f11e49ea2 hg19 Blood Derived Normal 1105277 +C685110.WGS.R.ADNA_1d688b70 C685110 GBM WGS recurrent_tumor 7316UP-1883 7316UP-1883.WholeGenome.RP-2158.bam 45089603892 BAM NA a0633e65-c728-4b6f-82f1-d7a2cbbe5463 2b848756f864d1a8c4df51d0c893a141 hg19 Recurrent Tumor SM-JU32S sample_tag=ADNA_1d688b70 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot +C685110.WGS.T.ADNA_224ab8cc C685110 GBM WGS tumor 7316UP-1640 7316UP-1640.WholeGenome.RP-2158.bam 52036892496 BAM NA bed75ef0-4e54-4a9d-99f5-ec221870fc82 7814414b25f3467cc474d853de8d0dc1 hg19 Primary Tumor SM-JU356 sample_tag=ADNA_224ab8cc Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C685110.WGS.T C685110 GBM WGS tumor 7316UP-1640-1105266 7316UP-1640-1105266.WholeGenome.RP-2158.bam 52796552329 BAM NA b081720c-6818-4299-916b-e2895fa2bb0e 5b86bf9d2e253af28c91c58f920a8626 hg19 Primary Tumor 1105266 C685110.WXS.N C685110 GBM WXS blood_normal 7316UP-1640-1105277 7316UP-1640-1105277.WholeExome.RP-1303.bam 26076619092 BAM NA b5898748-110f-4c82-b9d6-1fcb24a9253c 2a9122df46791d6874c664830397fee6 hg19 Blood Derived Normal 1105277 +C685110.WXS.R.ADNA_1d688b70 C685110 GBM WXS recurrent_tumor 7316UP-1883 7316UP-1883.WholeExome.RP-1303.bam 30500869483 BAM NA 04600742-4a51-4ad6-a18d-d4265c0dfad8 442d8d242df1c9b1fc51c4cd2b950340 hg19 Recurrent Tumor SM-JU32S sample_tag=ADNA_1d688b70 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot +C685110.WXS.T.ADNA_224ab8cc C685110 GBM WXS tumor 7316UP-1640 7316UP-1640.WholeExome.RP-1303.bam 31383164675 BAM NA e7d41a50-8623-40d3-8aed-23c140a7f820 bd7f3715c003c9664e481252d508b07d hg19 Primary Tumor SM-JU356 sample_tag=ADNA_224ab8cc Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C685110.WXS.T C685110 GBM WXS tumor 7316UP-1640-1105266 7316UP-1640-1105266.WholeExome.RP-1303.bam 24916908755 BAM NA 9d0a809c-159d-4108-bd85-d202c3174aa9 1d0e55a63658aba3ebbf261099d1cb60 hg19 Primary Tumor 1105266 C760878.MethArray.Green.R.ADNA_8e047fa6 C760878 GBM Methylation Array recurrent_tumor 7316UP-2726 205705520154_R02C01_Grn.idat 13677900 IDAT Green 35679230-1353-4e92-865c-2923a832f0ee 195673c04662146069558851d1c79c3e NA Recurrent Tumor SM-JU33H sample_tag=ADNA_8e047fa6 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C760878.MethArray.Green.T.ADNA_b1ddc47c C760878 GBM Methylation Array tumor 7316UP-1843 205705520083_R02C01_Grn.idat 13677900 IDAT Green 4996fa9a-a666-4f7b-a843-9be2a298d8dd 82332fa3845df5188180e0ef3087552f NA Primary Tumor SM-JU335 sample_tag=ADNA_b1ddc47c Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot @@ -38163,8 +38220,10 @@ C760878.RNA-Seq.R2.R C760878 GBM RNA-Seq recurrent_tumor 7316UP-2726-1104803 210 C760878.RNA-Seq.R2.T C760878 GBM RNA-Seq tumor 7316UP-1843-1104791 210713_UNC32-K00270_0291_AHLK5VBBXY_CCGTGAAG-CAGTGGAT_S6_L002_R2_001.fastq.gz 3707998190 FASTQ NA 51ca63ce-fa0b-4327-b258-dc34abd61afc c48910bc1037cfc3a36fb2eb3bb1dd7e NA Primary Tumor 1104791 C760878.WGS.R.ADNA_8e047fa6 C760878 GBM WGS recurrent_tumor 7316UP-2726 7316UP-2726.WholeGenome.RP-2158.bam 51148367936 BAM NA 86ad293f-7896-44da-b5ee-6136091f3ec1 a1f97f8051cd3de27ac0568c1889ea40 hg19 Recurrent Tumor SM-JU33H sample_tag=ADNA_8e047fa6 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C760878.WGS.R C760878 GBM WGS recurrent_tumor 7316UP-2726-1105268 7316UP-2726-1105268.WholeGenome.RP-2158.bam 43181516048 BAM NA e87422a4-53c4-4a78-b552-e769f2560d10 952a50dc22c514c8d1324c81ad2ff0e3 hg19 Recurrent Tumor 1105268 +C760878.WGS.T.ADNA_b1ddc47c C760878 GBM WGS tumor 7316UP-1843 7316UP-1843.WholeGenome.RP-2158.bam 52659142864 BAM NA 3521f7d5-7f2f-49a4-a056-677cf68534cf 13eed2638a303910faba6a6124bedd92 hg19 Primary Tumor SM-JU335 sample_tag=ADNA_b1ddc47c Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C760878.WGS.T C760878 GBM WGS tumor 7316UP-1843-1105254 7316UP-1843-1105254.WholeGenome.RP-2158.bam 64521345577 BAM NA 1450f6a2-0de0-4974-81fd-c7d489cee875 6291e068006afcd5a6b4637dc958717a hg19 Primary Tumor 1105254 C760878.WXS.N C760878 GBM WXS blood_normal 7316UP-1843-1105278 7316UP-1843-1105278.WholeExome.RP-1303.bam 25612276094 BAM NA 4254f062-9dc7-489e-816a-23711fe63892 3cb3084c36f9c4044fcbcd4758015b57 hg19 Blood Derived Normal 1105278 +C760878.WXS.R.ADNA_8e047fa6 C760878 GBM WXS recurrent_tumor 7316UP-2726 7316UP-2726.WholeExome.RP-1303.bam 34826010175 BAM NA 09bdc2a5-d466-4c7c-a812-a04762110d28 71f476c6099292d96fb9c2fe959bda31 hg19 Recurrent Tumor SM-JU33H sample_tag=ADNA_8e047fa6 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C760878.WXS.R C760878 GBM WXS recurrent_tumor 7316UP-2726-1105268 7316UP-2726-1105268.WholeExome.RP-1303.bam 36649596530 BAM NA 4d2157f1-28d9-4e05-8f9d-a4424b09c858 8f124c78ab2e85e2f8312c3d32f3762b hg19 Recurrent Tumor 1105268 C760878.WXS.T.ADNA_b1ddc47c C760878 GBM WXS tumor 7316UP-1843 7316UP-1843.WholeExome.RP-1303.bam 27174083246 BAM NA ccb3f38a-9134-4fc4-8a72-71f766a29c9d 156582dd20a1d821292563bf63984d9f hg19 Primary Tumor SM-JU335 sample_tag=ADNA_b1ddc47c Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C760878.WXS.T C760878 GBM WXS tumor 7316UP-1843-1105254 7316UP-1843-1105254.WholeExome.RP-1303.bam 24231661236 BAM NA ae2999a1-41b5-4226-b4c7-47045e937235 5a40c541dfe91688a386b9c6050dd688 hg19 Primary Tumor 1105254 @@ -38184,6 +38243,7 @@ C761370.WGS.R.ADNA_d11a2397 C761370 GBM WGS recurrent_tumor 7316UP-2310-1105240 C761370.WGS.T.ADNA_260f1df4 C761370 GBM WGS tumor 7316UP-1848 7316UP-1848.WholeGenome.RP-2158.bam 51644080684 BAM NA 3ff9d2fc-c389-4747-8648-f030c20b2c18 412c1506cb1068fc73b87256ba3d05e4 hg19 Primary Tumor SM-JU33T sample_tag=ADNA_260f1df4 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C761370.WGS.T C761370 GBM WGS tumor 7316UP-1848-1105252 7316UP-1848-1105252.WholeGenome.RP-2158.bam 52242174534 BAM NA b7a46c7c-1369-4b72-b781-d5b05e0c5d67 a1d299f96de11b27c06ca49d4ec7d30b hg19 Primary Tumor 1105252 C761370.WXS.N C761370 GBM WXS blood_normal 7316UP-1848-1105210 7316UP-1848-1105210.WholeExome.RP-1303.bam 25632609658 BAM NA 8c32252a-765b-4a13-9be9-59adf0e39899 e88ecda84eb4c45dd039ce33c101a0ae hg19 Blood Derived Normal 1105210 +C761370.WXS.R.ADNA_4b43218c C761370 GBM WXS recurrent_tumor 7316UP-2310 7316UP-2310.WholeExome.RP-1303.bam 47745759188 BAM NA 7f3a3a5d-557b-4af6-aed2-7e7b2c9ddfed 98949ae96661939248fd4c79723bf6d6 hg19 Recurrent Tumor SM-JU346 sample_tag=ADNA_4b43218c Duplicate Item: CHOP GBM Triplicate Recurrent Tumor DNA Aliquot C761370.WXS.R.ADNA_d11a2397 C761370 GBM WXS recurrent_tumor 7316UP-2310-1105240 7316UP-2310-1105240.WholeExome.RP-1303.bam 24522804264 BAM NA 2f90a34c-c645-448d-a51b-b45d398c728a 3450f62644b64e0faf890f9c6101da2f hg19 Recurrent Tumor 1105240 sample_tag=ADNA_d11a2397 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C761370.WXS.R C761370 GBM WXS recurrent_tumor 7316UP-2310-1105220 7316UP-2310-1105220.WholeExome.RP-1303.bam 22328978006 BAM NA f382759e-25f0-4a31-8f29-81ad8af13155 da7740d4ac4f7d4cd6f9188c4473522a hg19 Recurrent Tumor 1105220 C761370.WXS.T.ADNA_260f1df4 C761370 GBM WXS tumor 7316UP-1848 7316UP-1848.WholeExome.RP-1303.bam 31981438733 BAM NA 6dce99c6-b5a5-4ee0-8ee6-1e02ebf260a2 6c5be4d787070125a99a4f6e292b78bd hg19 Primary Tumor SM-JU33T sample_tag=ADNA_260f1df4 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot @@ -38198,15 +38258,18 @@ C827913.RNA-Seq.R1.R.ARNA_97c68cdd C827913 GBM RNA-Seq recurrent_tumor 7316UP-25 C827913.RNA-Seq.R2.R.ARNA_97c68cdd C827913 GBM RNA-Seq recurrent_tumor 7316UP-2527-1104816 210811_UNC31-K00269_0301_AHLLC5BBXY_GTTCCAAT-AATTCTGC_S8_L002_R2_001.fastq.gz 4505545231 FASTQ NA 81cfe120-ec7e-48d7-8468-c407c8fef01e 7dcd43d256201d30395355847bb0affe NA Recurrent Tumor 1104816 sample_tag=ARNA_97c68cdd Duplicate Item: CHOP GBM Duplicate Recurrent Tumor RNA Aliquot C827913.WGS.N C827913 GBM WGS blood_normal 7316UP-2058-1105217 7316UP-2058-1105217.WholeGenome.RP-2158.bam 66390255486 BAM NA b77d8996-e5d1-4181-8115-bdb50a062ab5 c5760db656ccec3d5d74cfeee2f86ede hg19 Blood Derived Normal 1105217 C827913.WGS.R.ADNA_cd3f587f C827913 GBM WGS recurrent_tumor 7316UP-2333-1105221 7316UP-2333-1105221.WholeGenome.RP-2158.bam 50801966508 BAM NA 49589c76-14e2-4739-a8ae-697ffa6e766d d76147ab25723eacbf809e74fe7626ce hg19 Recurrent Tumor 1105221 sample_tag=ADNA_cd3f587f Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot +C827913.WGS.R.ADNA_fa879b5e C827913 GBM WGS recurrent_tumor 7316UP-2527 7316UP-2527.WholeGenome.RP-2158.bam 52154368925 BAM NA de2c3484-c0cb-4e24-942a-23f0a8eb2ed3 e875aee1e02d798e798d3f890ee3383f hg19 Recurrent Tumor SM-JU34U sample_tag=ADNA_fa879b5e Duplicate Item: CHOP GBM Triplicate Recurrent Tumor DNA Aliquot C827913.WGS.T C827913 GBM WGS tumor 7316UP-2058 7316UP-2058.WholeGenome.RP-2158.bam 57079724828 BAM NA 64c68951-6295-4e75-8222-6a09e134fab5 c8721c32734a6f9227bc0e4e28eb42c2 hg19 Primary Tumor SM-JU34I C827913.WXS.N C827913 GBM WXS blood_normal 7316UP-2058-1105217 7316UP-2058-1105217.WholeExome.RP-1303.bam 27986255546 BAM NA f7344d7a-80b3-4e8c-8244-471c07ad98e8 8bd4d5c5bf0a6fa84b49156ce2b68e04 hg19 Blood Derived Normal 1105217 C827913.WXS.R.ADNA_cd3f587f C827913 GBM WXS recurrent_tumor 7316UP-2333-1105221 7316UP-2333-1105221.WholeExome.RP-1303.bam 25737528247 BAM NA e2e74c07-30bd-46c6-8342-53602855857b 1802d1a1cea35c6220e56e6521f5df6b hg19 Recurrent Tumor 1105221 sample_tag=ADNA_cd3f587f Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C827913.WXS.R.ADNA_fa879b5e C827913 GBM WXS recurrent_tumor 7316UP-2527 7316UP-2527.WholeExome.RP-1303.bam 26171566550 BAM NA 06e0be11-40ec-4fd8-a9c5-bb169e9f21b1 e10f6c5d6d3772135983786d4459e1b5 hg19 Recurrent Tumor SM-JU34U sample_tag=ADNA_fa879b5e Duplicate Item: CHOP GBM Triplicate Recurrent Tumor DNA Aliquot C827913.WXS.R C827913 GBM WXS recurrent_tumor 7316UP-2527-1105195 7316UP-2527-1105195.WholeExome.RP-1303.bam 24327000092 BAM NA 53703239-f5a5-411e-a5ce-e239614380ce 57fb3d0d8e8383f562a5d722be746910 hg19 Recurrent Tumor 1105195 +C827913.WXS.T C827913 GBM WXS tumor 7316UP-2058 7316UP-2058.WholeExome.RP-1303.bam 23498711738 BAM NA 25e176fc-33df-4190-85fd-515ccfde7a96 2dcda56718006e351e610e43408386f0 hg19 Primary Tumor SM-JU34I C846363.MethArray.Green.R.ADNA_a3686b92 C846363 GBM Methylation Array recurrent_tumor 7316UP-2843 205828590002_R01C01_Grn.idat 13677905 IDAT Green 92f2414a-b6c1-41fe-874d-1ac6b51d3438 837f6503ca67b082eea484065e5615fa NA Recurrent Tumor SM-JU32T sample_tag=ADNA_a3686b92 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C846363.MethArray.Green.T.ADNA_51dcc4a3 C846363 GBM Methylation Array tumor 7316UP-2100 205555380097_R02C01_Grn.idat 13677900 IDAT Green 35b93fcc-0db4-42fe-ae51-9b32bc6ae301 e36cedc96fdb37c5c6e0e73f95fe7c26 NA Primary Tumor SM-JU357 sample_tag=ADNA_51dcc4a3 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C846363.MethArray.Red.R.ADNA_a3686b92 C846363 GBM Methylation Array recurrent_tumor 7316UP-2843 205828590002_R01C01_Red.idat 13677905 IDAT Red ed169a03-fe11-4a60-ad81-dc345c430957 5318857f34c3a46b97a06677a86994a6 NA Recurrent Tumor SM-JU32T sample_tag=ADNA_a3686b92 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C846363.MethArray.Red.T.ADNA_51dcc4a3 C846363 GBM Methylation Array tumor 7316UP-2100 205555380097_R02C01_Red.idat 13677900 IDAT Red cadfb4ac-bc7a-4031-a17f-5c472255c296 3192c6758d68302e6c24de278757d65e NA Primary Tumor SM-JU357 sample_tag=ADNA_51dcc4a3 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot +C846363.miRNA-Seq.R C846363 GBM miRNA-Seq recurrent_tumor 7316UP-2843-1104781 220125_UNC32-K00270_0311_AHMNYYBBXY_CGGAAT_S10_L002_R1_001.unaln.bam 324967490 BAM NA 26a84bda-5a37-4951-8a78-f77b7babb8da cb2ba09a4a8a243c4c12568701bb4d29 NA Recurrent Tumor 1104781 C846363.miRNA-Seq.T C846363 GBM miRNA-Seq tumor 7316UP-2100-1104756 210817_UNC31-K00269_0302_AHLCTHBBXY_GTAGAG_S17_L001_R1_001.unaln.bam 206124662 BAM NA 2178becd-560c-4622-a785-7e4cc3f4f170 240fc2203bff324b9826013bfceb2c87 NA Primary Tumor 1104756 C846363.RNA-Seq.R1.R C846363 GBM RNA-Seq recurrent_tumor 7316UP-2843-1104781 210811_UNC31-K00269_0301_AHLLC5BBXY_AGCTCGCT-GCAGAATC_S17_L005_R1_001.fastq.gz 3998179847 FASTQ NA ed500025-1eaf-4dde-8174-8803c579bb73 8631c4f69148ceb691f1273b8bfe69b7 NA Recurrent Tumor 1104781 C846363.RNA-Seq.R1.T C846363 GBM RNA-Seq tumor 7316UP-2100-1104756 210713_UNC32-K00270_0291_AHLK5VBBXY_TACCGAGG-CCTGAACT_S3_L001_R1_001.fastq.gz 3798490040 FASTQ NA 05606bfc-9000-4aa7-a4d1-694fc9ad6410 2534e9e52e34bae5f5e46e835aa08896 NA Primary Tumor 1104756 @@ -38219,6 +38282,7 @@ C846363.WGS.T C846363 GBM WGS tumor 7316UP-2100-1105219 7316UP-2100-1105219.Whol C846363.WXS.N C846363 GBM WXS blood_normal 7316UP-2100-1105216 7316UP-2100-1105216.WholeExome.RP-1303.bam 29207285501 BAM NA bd45cd04-f40e-405e-9bc2-1c42e8614cb1 4b81d4fab0d67c8ccd13a92280b158a9 hg19 Blood Derived Normal 1105216 C846363.WXS.R.ADNA_a3686b92 C846363 GBM WXS recurrent_tumor 7316UP-2843 7316UP-2843.WholeExome.RP-1303.bam 33943432437 BAM NA 31af42c6-e11c-49c5-ab77-dd8dd863bdcc 4b7a30c10f231ec886e6de47edd91a3a hg19 Recurrent Tumor SM-JU32T sample_tag=ADNA_a3686b92 Duplicate Item: CHOP GBM Duplicate Recurrent Tumor DNA Aliquot C846363.WXS.R C846363 GBM WXS recurrent_tumor 7316UP-2843-1105244 7316UP-2843-1105244.WholeExome.RP-1303.bam 23343495743 BAM NA b8590e83-d959-46b0-90aa-88bc644962fc f99e05802a978632cdb7d8a20b23ba84 hg19 Recurrent Tumor 1105244 +C846363.WXS.T.ADNA_51dcc4a3 C846363 GBM WXS tumor 7316UP-2100 7316UP-2100.WholeExome.RP-1303.bam 35056319324 BAM NA 12336b79-920e-441d-b2cb-de3f75f31fdd 1e7f2f490f374c9e9693c1ea22ce3d1c hg19 Primary Tumor SM-JU357 sample_tag=ADNA_51dcc4a3 Duplicate Item: CHOP GBM Duplicate Primary Tumor DNA Aliquot C846363.WXS.T C846363 GBM WXS tumor 7316UP-2100-1105219 7316UP-2100-1105219.WholeExome.RP-1303.bam 15815239997 BAM NA 57b43f3a-59cf-4057-9240-5c0965ff2f09 caa81a2c6b3a25623daaf3b4e3918b00 hg19 Primary Tumor 1105219 GTEX-NPJ7-0011-R10A-SM-HAKXW.miRNA-Seq.A GTEX-NPJ7-0011-R10A-SM-HAKXW GBM miRNA-Seq tissue_normal CPT0286590000 190813_UNC32-K00270_0196_AH5MCWBBXY_GTAGAG_S46_L004_R1_001.unaln.bam 164935939 BAM NA b04dd504-b320-4b74-8b55-245d542a1591 99204b51c7bca4b47061d2e1b9ab03a7 NA Solid Tissue Normal PT-NPJ7-01 GTEX-NPJ7-0011-R10A-SM-HAKXW.miRNA-Seq.A.hg38 GTEX-NPJ7-0011-R10A-SM-HAKXW GBM miRNA-Seq tissue_normal CPT0286590000 59a32933-dcc8-4347-b3ea-ac4f0b41a1ed_mirnaseq_gdc_realn.bam 186345250 BAM NA 8d438eb7-7ede-4df3-9f1e-47063e2c0428 5297814bbb233db6b16068da94dcac73 hg38 Solid Tissue Normal PT-NPJ7-01